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# Copyright (c) 2012-2020 Jicamarca Radio Observatory
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# All rights reserved.
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#
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# Distributed under the terms of the BSD 3-clause license.
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"""schainpy is an open source library to read, write and process radar data
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Signal Chain is a radar data processing library wich includes modules to read,
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and write different files formats, besides modules to process and visualize the
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data.
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"""
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import os
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import re
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from setuptools import setup, Extension
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from setuptools.command.build_ext import build_ext as _build_ext
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from schainpy import __version__
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DOCLINES = __doc__.split("\n")
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gfor = os.popen("gfortran --version").read()
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match = re.search(r'\d+',gfor)
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gfor_ver = int(match.group())
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class build_ext(_build_ext):
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def finalize_options(self):
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_build_ext.finalize_options(self)
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# Prevent numpy from thinking it is still in its setup process:
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__builtins__.__NUMPY_SETUP__ = False
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import numpy
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self.include_dirs.append(numpy.get_include())
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setup(
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name = "schainpy",
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version = __version__,
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description = DOCLINES[0],
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long_description = "\n".join(DOCLINES[2:]),
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url = "https://github.com/JRO-Peru/schainpy",
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author = "Jicamarca Radio Observatory",
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author_email = "jro-developers@jro.igp.gob.pe",
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license="BSD-3-Clause",
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classifiers=[
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"Development Status :: 4 - Beta",
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"Environment :: Console",
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"Intended Audience :: Science/Research",
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"License :: OSI Approved :: BSD License",
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"Operating System :: MacOS :: MacOS X",
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"Operating System :: POSIX :: Linux",
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"Programming Language :: Python :: 2",
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"Programming Language :: Python :: 2.7",
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"Programming Language :: Python :: 3",
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"Programming Language :: Python :: 3.5",
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"Programming Language :: Python :: 3.6",
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"Programming Language :: Python :: 3.7",
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"Programming Language :: Python :: 3.8",
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"Topic :: Scientific/Engineering",
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],
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packages = {
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'schainpy',
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'schainpy.model',
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'schainpy.model.data',
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'schainpy.model.graphics',
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'schainpy.model.io',
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'schainpy.model.proc',
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'schainpy.model.utils',
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'schainpy.utils',
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'schainpy.gui',
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'schainpy.cli',
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},
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package_data = {'': ['schain.conf.template'],
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'schainpy.files': ['*.oga']
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},
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include_package_data = False,
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scripts = ['schainpy/gui/schainGUI'],
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entry_points = {
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'console_scripts': [
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'schain = schainpy.cli.cli:main',
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],
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},
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cmdclass = {'build_ext': build_ext},
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ext_modules=[
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Extension("schainpy.model.data._noise", ["schainc/_noise.c"]),
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Extension("schainpy.model.data._HS_algorithm", ["schainc/_HS_algorithm.c"]),
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],
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setup_requires = ["numpy"],
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install_requires = [
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"scipy",
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"h5py",
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"matplotlib",
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"pyzmq",
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"fuzzywuzzy",
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"click",
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],
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)
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main_path = os.getcwd()
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child_path = '/schainf/Ffiles/bfmodel/'
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child_path_r = '/schainf/Ffiles/jlib26feb2001'
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#print("main_path: ", main_path)
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my_str = ' '+"ppath = "+"\""+main_path+"\"\n"
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my_str_2 = ' '+"cpath = "+"\""+child_path+"\""
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my_str_2_r = ' '+"cpath = "+"\""+child_path_r+"\""
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#'''
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with open('./schainf/Ffiles/get_path_1.f', 'r') as path1: data1 = path1.read()
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with open('./schainf/Ffiles/get_path_2.f', 'r') as path2: data2 = path2.read()
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with open('./schainf/Ffiles/get_path.f', 'w') as final: final.write(data1+my_str+my_str_2+data2)
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with open('./schainf/Ffiles/get_path_1_reader.f', 'r') as p1: data1_r = p1.read()
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with open('./schainf/Ffiles/get_path_2_reader.f', 'r') as p2: data2_r = p2.read()
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with open('./schainf/Ffiles/get_path_reader.f', 'w') as final_r: final_r.write(data1_r+my_str+my_str_2_r+data2_r)
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#'''
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from numpy.distutils.core import Extension, setup
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if gfor_ver >= 10:
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extra_f77 = "-fallow-argument-mismatch"
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else:
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extra_f77 = "-g"
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setup(name='schainpy',
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ext_modules = [
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Extension("schainpy.model.proc.mkfact_short_2020_2",
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sources=[
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"schainf/Ffiles/mkfact_short_2020_2.pyf",
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"schainf/Ffiles/lmdif1.f",
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"schainf/Ffiles/mkfact.f",
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"schainf/Ffiles/r1mach.f",
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"schainf/Ffiles/bfield2.f",
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"schainf/Ffiles/get_path.f"],
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extra_f77_compile_args=[extra_f77]),
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Extension("schainpy.model.proc.fitacf_guess",
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sources=[
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"schainf/Ffiles/fitacf_guess.pyf",
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"schainf/Ffiles/fitacf_guess.f"],
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extra_f77_compile_args=[extra_f77]),
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Extension("schainpy.model.proc.fitacf_acf2",
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sources = [
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"schainf/Ffiles/fitacf_acf2.pyf",
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"schainf/Ffiles/full_profile_profile.f",
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"schainf/Ffiles/fitacf.f",
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"schainf/Ffiles/get_path_reader.f",
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"schainf/Ffiles/r1mach.f",
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"schainf/Ffiles/lmdif1.f",
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"schainf/Ffiles/lagp.f",
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"schainf/Ffiles/reader.c",
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"schainf/Ffiles/cbesi.f",
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"schainf/Ffiles/i1mach.f",
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"schainf/Ffiles/zeta.f",
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"schainf/Ffiles/qc25f.f",
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"schainf/Ffiles/qwgtf.f",
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"schainf/Ffiles/qcheb.f",
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"schainf/Ffiles/sgtsl.f",
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"schainf/Ffiles/qk15w.f",
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"schainf/Ffiles/complex.c",
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"schainf/Ffiles/cbinu.f",
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"schainf/Ffiles/cseri.f",
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"schainf/Ffiles/cwrsk.f",
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"schainf/Ffiles/crati.f",
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"schainf/Ffiles/casyi.f",
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"schainf/Ffiles/cbuni.f",
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"schainf/Ffiles/cuni2.f",
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"schainf/Ffiles/gamln.f",
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"schainf/Ffiles/cuchk.f",
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"schainf/Ffiles/cbknu.f",
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"schainf/Ffiles/cshch.f",
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"schainf/Ffiles/ckscl.f",
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"schainf/Ffiles/cuoik.f",
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"schainf/Ffiles/cunik.f",
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"schainf/Ffiles/cuni1.f",
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"schainf/Ffiles/cairy.f",
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"schainf/Ffiles/cmlri.f",
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"schainf/Ffiles/cunhj.f",
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"schainf/Ffiles/cacai.f",
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"schainf/Ffiles/csisl.f",
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"schainf/Ffiles/caxpy.f",
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"schainf/Ffiles/cs1s2.f",
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"schainf/Ffiles/scabs1.f",
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"schainf/Ffiles/cdotu.f",
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"schainf/Ffiles/rs.f",
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"schainf/Ffiles/sppfa.f",
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"schainf/Ffiles/sdot.f",
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"schainf/Ffiles/tred2.f",
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"schainf/Ffiles/tql2.f",
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"schainf/Ffiles/sppdi.f",
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"schainf/Ffiles/saxpy.f",
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"schainf/Ffiles/sscal.f",
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"schainf/Ffiles/pythag.f",
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"schainf/Ffiles/tql1.f",
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"schainf/Ffiles/get_path.f",
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"schainf/Ffiles/tred1.f"],
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extra_f77_compile_args=[extra_f77]),
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Extension("schainpy.model.proc.fitacf_fit_short",
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sources = [
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"schainf/Ffiles/fitacf_fit_short.pyf",
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"schainf/Ffiles/cairy.f",
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"schainf/Ffiles/casyi.f",
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"schainf/Ffiles/cbesi.f",
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"schainf/Ffiles/cbinu.f",
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"schainf/Ffiles/cbknu.f",
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"schainf/Ffiles/cbuni.f",
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"schainf/Ffiles/ckscl.f",
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"schainf/Ffiles/crati.f",
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"schainf/Ffiles/cacai.f",
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"schainf/Ffiles/cmlri.f",
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"schainf/Ffiles/cs1s2.f",
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"schainf/Ffiles/cseri.f",
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"schainf/Ffiles/cshch.f",
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"schainf/Ffiles/cuchk.f",
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"schainf/Ffiles/cunhj.f",
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"schainf/Ffiles/cuni1.f",
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"schainf/Ffiles/complex.c",
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"schainf/Ffiles/cuni2.f",
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"schainf/Ffiles/cunik.f",
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"schainf/Ffiles/cuoik.f",
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"schainf/Ffiles/cwrsk.f",
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"schainf/Ffiles/fitacf_fit_short.f",
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"schainf/Ffiles/gamln.f",
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"schainf/Ffiles/i1mach.f",
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"schainf/Ffiles/lmdif1.f",
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"schainf/Ffiles/pythag.f",
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"schainf/Ffiles/qc25f.f",
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"schainf/Ffiles/qcheb.f",
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"schainf/Ffiles/qk15w.f",
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"schainf/Ffiles/qwgtf.f",
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"schainf/Ffiles/r1mach.f",
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"schainf/Ffiles/reader.c",
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"schainf/Ffiles/rs.f",
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"schainf/Ffiles/saxpy.f",
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"schainf/Ffiles/sdot.f",
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"schainf/Ffiles/sgtsl.f",
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"schainf/Ffiles/sppdi.f",
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"schainf/Ffiles/sppfa.f",
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"schainf/Ffiles/sscal.f",
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"schainf/Ffiles/tql1.f",
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"schainf/Ffiles/tql2.f",
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"schainf/Ffiles/tred1.f",
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"schainf/Ffiles/tred2.f",
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"schainf/Ffiles/get_path.f",
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"schainf/Ffiles/get_path_reader.f",
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"schainf/Ffiles/zeta.f"],
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extra_f77_compile_args=[extra_f77]),
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Extension("schainpy.model.proc.full_profile_profile",
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sources = [
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"schainf/Ffiles/full_profile_profile.pyf",
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"schainf/Ffiles/full_profile_profile.f",
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"schainf/Ffiles/get_path_reader.f",
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"schainf/Ffiles/fitacf.f",
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"schainf/Ffiles/r1mach.f",
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"schainf/Ffiles/lmdif1.f",
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"schainf/Ffiles/reader.c",
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"schainf/Ffiles/cbesi.f",
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"schainf/Ffiles/lagp.f",
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"schainf/Ffiles/i1mach.f",
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"schainf/Ffiles/zeta.f",
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"schainf/Ffiles/qc25f.f",
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"schainf/Ffiles/qwgtf.f",
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"schainf/Ffiles/qcheb.f",
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"schainf/Ffiles/sgtsl.f",
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"schainf/Ffiles/qk15w.f",
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"schainf/Ffiles/cbinu.f",
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"schainf/Ffiles/complex.c",
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"schainf/Ffiles/cseri.f",
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"schainf/Ffiles/cwrsk.f",
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"schainf/Ffiles/crati.f",
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"schainf/Ffiles/casyi.f",
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"schainf/Ffiles/cbuni.f",
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"schainf/Ffiles/cuni2.f",
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"schainf/Ffiles/gamln.f",
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"schainf/Ffiles/cuchk.f",
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"schainf/Ffiles/cbknu.f",
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"schainf/Ffiles/cshch.f",
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"schainf/Ffiles/ckscl.f",
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"schainf/Ffiles/cuoik.f",
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"schainf/Ffiles/cunik.f",
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"schainf/Ffiles/cuni1.f",
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"schainf/Ffiles/cairy.f",
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"schainf/Ffiles/cmlri.f",
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"schainf/Ffiles/cunhj.f",
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"schainf/Ffiles/cacai.f",
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"schainf/Ffiles/csisl.f",
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"schainf/Ffiles/caxpy.f",
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"schainf/Ffiles/cs1s2.f",
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"schainf/Ffiles/scabs1.f",
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"schainf/Ffiles/cdotu.f",
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"schainf/Ffiles/rs.f",
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"schainf/Ffiles/sppfa.f",
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"schainf/Ffiles/sdot.f",
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"schainf/Ffiles/tred2.f",
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"schainf/Ffiles/tql2.f",
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"schainf/Ffiles/sppdi.f",
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"schainf/Ffiles/saxpy.f",
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"schainf/Ffiles/sscal.f",
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"schainf/Ffiles/pythag.f",
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"schainf/Ffiles/tql1.f",
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"schainf/Ffiles/get_path.f",
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"schainf/Ffiles/tred1.f"],
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extra_f77_compile_args=[extra_f77])
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]
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)
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