| @@ -1,1321 +1,1321 | |||
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1 | 1 | ''' |
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2 | 2 | Created on September , 2012 |
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3 | 3 | @author: |
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4 | 4 | ''' |
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5 | 5 | |
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6 | 6 | import sys |
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7 | 7 | import ast |
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8 | 8 | import datetime |
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9 | 9 | import traceback |
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10 | 10 | import math |
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11 | import time | |
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11 | 12 | from multiprocessing import Process, Queue, cpu_count |
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12 | 13 | |
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13 | 14 | import schainpy |
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14 | 15 | import schainpy.admin |
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15 | 16 | |
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16 | 17 | from xml.etree.ElementTree import ElementTree, Element, SubElement, tostring |
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17 | 18 | from xml.dom import minidom |
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18 | 19 | |
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19 | 20 | from schainpy.model import * |
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20 | 21 | from time import sleep |
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21 | 22 | |
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22 | 23 | def prettify(elem): |
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23 | 24 | """Return a pretty-printed XML string for the Element. |
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24 | 25 | """ |
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25 | 26 | rough_string = tostring(elem, 'utf-8') |
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26 | 27 | reparsed = minidom.parseString(rough_string) |
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27 | 28 | return reparsed.toprettyxml(indent=" ") |
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28 | 29 | |
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29 | 30 | def multiSchain(child, nProcess=cpu_count(), startDate=None, endDate=None, by_day=False): |
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30 | 31 | skip = 0 |
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31 | 32 | cursor = 0 |
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32 | 33 | nFiles = None |
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33 | 34 | processes = [] |
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34 | 35 | dt1 = datetime.datetime.strptime(startDate, '%Y/%m/%d') |
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35 | 36 | dt2 = datetime.datetime.strptime(endDate, '%Y/%m/%d') |
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36 | 37 | days = (dt2 - dt1).days |
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37 | 38 | |
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38 | 39 | for day in range(days+1): |
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39 | 40 | skip = 0 |
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40 | 41 | cursor = 0 |
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41 | 42 | q = Queue() |
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42 | 43 | processes = [] |
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43 | 44 | dt = (dt1 + datetime.timedelta(day)).strftime('%Y/%m/%d') |
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44 | 45 | firstProcess = Process(target=child, args=(cursor, skip, q, dt)) |
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45 | 46 | firstProcess.start() |
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46 | 47 | if by_day: |
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47 | 48 | continue |
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48 | 49 | nFiles = q.get() |
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49 | 50 | firstProcess.terminate() |
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50 | 51 | skip = int(math.ceil(nFiles/nProcess)) |
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51 | 52 | while True: |
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52 | 53 | processes.append(Process(target=child, args=(cursor, skip, q, dt))) |
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53 | 54 | processes[cursor].start() |
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54 | 55 | if nFiles < cursor*skip: |
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55 | 56 | break |
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56 | 57 | cursor += 1 |
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57 | 58 | |
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58 | 59 | def beforeExit(exctype, value, trace): |
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59 | 60 | for process in processes: |
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60 | 61 | process.terminate() |
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61 | 62 | process.join() |
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62 | 63 | print traceback.print_tb(trace) |
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63 | 64 | |
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64 | 65 | sys.excepthook = beforeExit |
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65 | 66 | |
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66 | 67 | for process in processes: |
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67 | 68 | process.join() |
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68 | 69 | process.terminate() |
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69 |
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70 | ||
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70 | time.sleep(3) | |
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71 | 71 | |
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72 | 72 | class ParameterConf(): |
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73 | 73 | |
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74 | 74 | id = None |
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75 | 75 | name = None |
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76 | 76 | value = None |
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77 | 77 | format = None |
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78 | 78 | |
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79 | 79 | __formated_value = None |
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80 | 80 | |
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81 | 81 | ELEMENTNAME = 'Parameter' |
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82 | 82 | |
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83 | 83 | def __init__(self): |
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84 | 84 | |
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85 | 85 | self.format = 'str' |
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86 | 86 | |
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87 | 87 | def getElementName(self): |
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88 | 88 | |
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89 | 89 | return self.ELEMENTNAME |
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90 | 90 | |
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91 | 91 | def getValue(self): |
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92 | 92 | |
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93 | 93 | value = self.value |
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94 | 94 | format = self.format |
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95 | 95 | |
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96 | 96 | if self.__formated_value != None: |
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97 | 97 | |
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98 | 98 | return self.__formated_value |
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99 | 99 | |
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100 | 100 | if format == 'obj': |
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101 | 101 | return value |
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102 | 102 | |
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103 | 103 | if format == 'str': |
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104 | 104 | self.__formated_value = str(value) |
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105 | 105 | return self.__formated_value |
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106 | 106 | |
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107 | 107 | if value == '': |
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108 | 108 | raise ValueError, "%s: This parameter value is empty" %self.name |
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109 | 109 | |
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110 | 110 | if format == 'list': |
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111 | 111 | strList = value.split(',') |
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112 | 112 | |
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113 | 113 | self.__formated_value = strList |
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114 | 114 | |
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115 | 115 | return self.__formated_value |
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116 | 116 | |
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117 | 117 | if format == 'intlist': |
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118 | 118 | """ |
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119 | 119 | Example: |
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120 | 120 | value = (0,1,2) |
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121 | 121 | """ |
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122 | 122 | |
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123 | 123 | new_value = ast.literal_eval(value) |
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124 | 124 | |
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125 | 125 | if type(new_value) not in (tuple, list): |
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126 | 126 | new_value = [int(new_value)] |
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127 | 127 | |
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128 | 128 | self.__formated_value = new_value |
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129 | 129 | |
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130 | 130 | return self.__formated_value |
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131 | 131 | |
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132 | 132 | if format == 'floatlist': |
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133 | 133 | """ |
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134 | 134 | Example: |
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135 | 135 | value = (0.5, 1.4, 2.7) |
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136 | 136 | """ |
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137 | 137 | |
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138 | 138 | new_value = ast.literal_eval(value) |
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139 | 139 | |
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140 | 140 | if type(new_value) not in (tuple, list): |
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141 | 141 | new_value = [float(new_value)] |
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142 | 142 | |
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143 | 143 | self.__formated_value = new_value |
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144 | 144 | |
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145 | 145 | return self.__formated_value |
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146 | 146 | |
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147 | 147 | if format == 'date': |
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148 | 148 | strList = value.split('/') |
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149 | 149 | intList = [int(x) for x in strList] |
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150 | 150 | date = datetime.date(intList[0], intList[1], intList[2]) |
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151 | 151 | |
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152 | 152 | self.__formated_value = date |
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153 | 153 | |
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154 | 154 | return self.__formated_value |
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155 | 155 | |
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156 | 156 | if format == 'time': |
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157 | 157 | strList = value.split(':') |
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158 | 158 | intList = [int(x) for x in strList] |
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159 | 159 | time = datetime.time(intList[0], intList[1], intList[2]) |
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160 | 160 | |
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161 | 161 | self.__formated_value = time |
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162 | 162 | |
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163 | 163 | return self.__formated_value |
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164 | 164 | |
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165 | 165 | if format == 'pairslist': |
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166 | 166 | """ |
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167 | 167 | Example: |
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168 | 168 | value = (0,1),(1,2) |
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169 | 169 | """ |
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170 | 170 | |
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171 | 171 | new_value = ast.literal_eval(value) |
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172 | 172 | |
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173 | 173 | if type(new_value) not in (tuple, list): |
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174 | 174 | raise ValueError, "%s has to be a tuple or list of pairs" %value |
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175 | 175 | |
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176 | 176 | if type(new_value[0]) not in (tuple, list): |
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177 | 177 | if len(new_value) != 2: |
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178 | 178 | raise ValueError, "%s has to be a tuple or list of pairs" %value |
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179 | 179 | new_value = [new_value] |
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180 | 180 | |
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181 | 181 | for thisPair in new_value: |
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182 | 182 | if len(thisPair) != 2: |
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183 | 183 | raise ValueError, "%s has to be a tuple or list of pairs" %value |
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184 | 184 | |
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185 | 185 | self.__formated_value = new_value |
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186 | 186 | |
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187 | 187 | return self.__formated_value |
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188 | 188 | |
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189 | 189 | if format == 'multilist': |
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190 | 190 | """ |
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191 | 191 | Example: |
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192 | 192 | value = (0,1,2),(3,4,5) |
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193 | 193 | """ |
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194 | 194 | multiList = ast.literal_eval(value) |
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195 | 195 | |
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196 | 196 | if type(multiList[0]) == int: |
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197 | 197 | multiList = ast.literal_eval("(" + value + ")") |
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198 | 198 | |
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199 | 199 | self.__formated_value = multiList |
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200 | 200 | |
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201 | 201 | return self.__formated_value |
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202 | 202 | |
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203 | 203 | if format == 'bool': |
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204 | 204 | value = int(value) |
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205 | 205 | |
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206 | 206 | if format == 'int': |
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207 | 207 | value = float(value) |
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208 | 208 | |
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209 | 209 | format_func = eval(format) |
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210 | 210 | |
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211 | 211 | self.__formated_value = format_func(value) |
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212 | 212 | |
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213 | 213 | return self.__formated_value |
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214 | 214 | |
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215 | 215 | def updateId(self, new_id): |
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216 | 216 | |
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217 | 217 | self.id = str(new_id) |
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218 | 218 | |
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219 | 219 | def setup(self, id, name, value, format='str'): |
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220 | 220 | |
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221 | 221 | self.id = str(id) |
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222 | 222 | self.name = name |
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223 | 223 | if format == 'obj': |
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224 | 224 | self.value = value |
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225 | 225 | else: |
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226 | 226 | self.value = str(value) |
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227 | 227 | self.format = str.lower(format) |
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228 | 228 | |
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229 | 229 | self.getValue() |
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230 | 230 | |
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231 | 231 | return 1 |
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232 | 232 | |
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233 | 233 | def update(self, name, value, format='str'): |
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234 | 234 | |
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235 | 235 | self.name = name |
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236 | 236 | self.value = str(value) |
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237 | 237 | self.format = format |
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238 | 238 | |
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239 | 239 | def makeXml(self, opElement): |
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240 | 240 | if self.name not in ('queue',): |
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241 | 241 | parmElement = SubElement(opElement, self.ELEMENTNAME) |
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242 | 242 | parmElement.set('id', str(self.id)) |
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243 | 243 | parmElement.set('name', self.name) |
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244 | 244 | parmElement.set('value', self.value) |
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245 | 245 | parmElement.set('format', self.format) |
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246 | 246 | |
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247 | 247 | def readXml(self, parmElement): |
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248 | 248 | |
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249 | 249 | self.id = parmElement.get('id') |
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250 | 250 | self.name = parmElement.get('name') |
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251 | 251 | self.value = parmElement.get('value') |
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252 | 252 | self.format = str.lower(parmElement.get('format')) |
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253 | 253 | |
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254 | 254 | #Compatible with old signal chain version |
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255 | 255 | if self.format == 'int' and self.name == 'idfigure': |
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256 | 256 | self.name = 'id' |
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257 | 257 | |
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258 | 258 | def printattr(self): |
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259 | 259 | |
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260 | 260 | print "Parameter[%s]: name = %s, value = %s, format = %s" %(self.id, self.name, self.value, self.format) |
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261 | 261 | |
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262 | 262 | class OperationConf(): |
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263 | 263 | |
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264 | 264 | id = None |
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265 | 265 | name = None |
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266 | 266 | priority = None |
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267 | 267 | type = None |
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268 | 268 | |
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269 | 269 | parmConfObjList = [] |
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270 | 270 | |
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271 | 271 | ELEMENTNAME = 'Operation' |
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272 | 272 | |
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273 | 273 | def __init__(self): |
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274 | 274 | |
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275 | 275 | self.id = '0' |
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276 | 276 | self.name = None |
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277 | 277 | self.priority = None |
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278 | 278 | self.type = 'self' |
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279 | 279 | |
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280 | 280 | |
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281 | 281 | def __getNewId(self): |
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282 | 282 | |
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283 | 283 | return int(self.id)*10 + len(self.parmConfObjList) + 1 |
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284 | 284 | |
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285 | 285 | def updateId(self, new_id): |
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286 | 286 | |
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287 | 287 | self.id = str(new_id) |
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288 | 288 | |
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289 | 289 | n = 1 |
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290 | 290 | for parmObj in self.parmConfObjList: |
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291 | 291 | |
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292 | 292 | idParm = str(int(new_id)*10 + n) |
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293 | 293 | parmObj.updateId(idParm) |
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294 | 294 | |
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295 | 295 | n += 1 |
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296 | 296 | |
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297 | 297 | def getElementName(self): |
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298 | 298 | |
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299 | 299 | return self.ELEMENTNAME |
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300 | 300 | |
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301 | 301 | def getParameterObjList(self): |
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302 | 302 | |
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303 | 303 | return self.parmConfObjList |
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304 | 304 | |
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305 | 305 | def getParameterObj(self, parameterName): |
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306 | 306 | |
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307 | 307 | for parmConfObj in self.parmConfObjList: |
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308 | 308 | |
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309 | 309 | if parmConfObj.name != parameterName: |
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310 | 310 | continue |
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311 | 311 | |
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312 | 312 | return parmConfObj |
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313 | 313 | |
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314 | 314 | return None |
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315 | 315 | |
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316 | 316 | def getParameterObjfromValue(self, parameterValue): |
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317 | 317 | |
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318 | 318 | for parmConfObj in self.parmConfObjList: |
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319 | 319 | |
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320 | 320 | if parmConfObj.getValue() != parameterValue: |
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321 | 321 | continue |
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322 | 322 | |
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323 | 323 | return parmConfObj.getValue() |
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324 | 324 | |
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325 | 325 | return None |
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326 | 326 | |
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327 | 327 | def getParameterValue(self, parameterName): |
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328 | 328 | |
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329 | 329 | parameterObj = self.getParameterObj(parameterName) |
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330 | 330 | |
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331 | 331 | # if not parameterObj: |
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332 | 332 | # return None |
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333 | 333 | |
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334 | 334 | value = parameterObj.getValue() |
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335 | 335 | |
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336 | 336 | return value |
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337 | 337 | |
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338 | 338 | |
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339 | 339 | def getKwargs(self): |
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340 | 340 | |
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341 | 341 | kwargs = {} |
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342 | 342 | |
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343 | 343 | for parmConfObj in self.parmConfObjList: |
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344 | 344 | if self.name == 'run' and parmConfObj.name == 'datatype': |
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345 | 345 | continue |
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346 | 346 | |
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347 | 347 | kwargs[parmConfObj.name] = parmConfObj.getValue() |
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348 | 348 | |
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349 | 349 | return kwargs |
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350 | 350 | |
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351 | 351 | def setup(self, id, name, priority, type): |
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352 | 352 | |
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353 | 353 | self.id = str(id) |
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354 | 354 | self.name = name |
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355 | 355 | self.type = type |
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356 | 356 | self.priority = priority |
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357 | 357 | |
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358 | 358 | self.parmConfObjList = [] |
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359 | 359 | |
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360 | 360 | def removeParameters(self): |
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361 | 361 | |
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362 | 362 | for obj in self.parmConfObjList: |
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363 | 363 | del obj |
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364 | 364 | |
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365 | 365 | self.parmConfObjList = [] |
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366 | 366 | |
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367 | 367 | def addParameter(self, name, value, format='str'): |
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368 | 368 | |
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369 | 369 | id = self.__getNewId() |
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370 | 370 | |
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371 | 371 | parmConfObj = ParameterConf() |
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372 | 372 | if not parmConfObj.setup(id, name, value, format): |
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373 | 373 | return None |
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374 | 374 | |
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375 | 375 | self.parmConfObjList.append(parmConfObj) |
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376 | 376 | |
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377 | 377 | return parmConfObj |
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378 | 378 | |
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379 | 379 | def changeParameter(self, name, value, format='str'): |
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380 | 380 | |
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381 | 381 | parmConfObj = self.getParameterObj(name) |
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382 | 382 | parmConfObj.update(name, value, format) |
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383 | 383 | |
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384 | 384 | return parmConfObj |
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385 | 385 | |
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386 | 386 | def makeXml(self, procUnitElement): |
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387 | 387 | |
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388 | 388 | opElement = SubElement(procUnitElement, self.ELEMENTNAME) |
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389 | 389 | opElement.set('id', str(self.id)) |
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390 | 390 | opElement.set('name', self.name) |
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391 | 391 | opElement.set('type', self.type) |
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392 | 392 | opElement.set('priority', str(self.priority)) |
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393 | 393 | |
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394 | 394 | for parmConfObj in self.parmConfObjList: |
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395 | 395 | parmConfObj.makeXml(opElement) |
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396 | 396 | |
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397 | 397 | def readXml(self, opElement): |
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398 | 398 | |
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399 | 399 | self.id = opElement.get('id') |
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400 | 400 | self.name = opElement.get('name') |
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401 | 401 | self.type = opElement.get('type') |
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402 | 402 | self.priority = opElement.get('priority') |
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403 | 403 | |
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404 | 404 | #Compatible with old signal chain version |
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405 | 405 | #Use of 'run' method instead 'init' |
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406 | 406 | if self.type == 'self' and self.name == 'init': |
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407 | 407 | self.name = 'run' |
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408 | 408 | |
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409 | 409 | self.parmConfObjList = [] |
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410 | 410 | |
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411 | 411 | parmElementList = opElement.iter(ParameterConf().getElementName()) |
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412 | 412 | |
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413 | 413 | for parmElement in parmElementList: |
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414 | 414 | parmConfObj = ParameterConf() |
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415 | 415 | parmConfObj.readXml(parmElement) |
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416 | 416 | |
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417 | 417 | #Compatible with old signal chain version |
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418 | 418 | #If an 'plot' OPERATION is found, changes name operation by the value of its type PARAMETER |
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419 | 419 | if self.type != 'self' and self.name == 'Plot': |
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420 | 420 | if parmConfObj.format == 'str' and parmConfObj.name == 'type': |
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421 | 421 | self.name = parmConfObj.value |
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422 | 422 | continue |
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423 | 423 | |
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424 | 424 | self.parmConfObjList.append(parmConfObj) |
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425 | 425 | |
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426 | 426 | def printattr(self): |
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427 | 427 | |
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428 | 428 | print "%s[%s]: name = %s, type = %s, priority = %s" %(self.ELEMENTNAME, |
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429 | 429 | self.id, |
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430 | 430 | self.name, |
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431 | 431 | self.type, |
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432 | 432 | self.priority) |
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433 | 433 | |
|
|
434 | 434 | for parmConfObj in self.parmConfObjList: |
|
|
435 | 435 | parmConfObj.printattr() |
|
|
436 | 436 | |
|
|
437 | 437 | def createObject(self, plotter_queue=None): |
|
|
438 | 438 | |
|
|
439 | 439 | |
|
|
440 | 440 | if self.type == 'self': |
|
|
441 | 441 | raise ValueError, "This operation type cannot be created" |
|
|
442 | 442 | |
|
|
443 | 443 | if self.type == 'plotter': |
|
|
444 | 444 | #Plotter(plotter_name) |
|
|
445 | 445 | if not plotter_queue: |
|
|
446 | 446 | raise ValueError, "plotter_queue is not defined. Use:\nmyProject = Project()\nmyProject.setPlotterQueue(plotter_queue)" |
|
|
447 | 447 | |
|
|
448 | 448 | opObj = Plotter(self.name, plotter_queue) |
|
|
449 | 449 | |
|
|
450 | 450 | if self.type == 'external' or self.type == 'other': |
|
|
451 | 451 | |
|
|
452 | 452 | className = eval(self.name) |
|
|
453 | 453 | kwargs = self.getKwargs() |
|
|
454 | 454 | |
|
|
455 | 455 | opObj = className(**kwargs) |
|
|
456 | 456 | |
|
|
457 | 457 | return opObj |
|
|
458 | 458 | |
|
|
459 | 459 | |
|
|
460 | 460 | class ProcUnitConf(): |
|
|
461 | 461 | |
|
|
462 | 462 | id = None |
|
|
463 | 463 | name = None |
|
|
464 | 464 | datatype = None |
|
|
465 | 465 | inputId = None |
|
|
466 | 466 | parentId = None |
|
|
467 | 467 | |
|
|
468 | 468 | opConfObjList = [] |
|
|
469 | 469 | |
|
|
470 | 470 | procUnitObj = None |
|
|
471 | 471 | opObjList = [] |
|
|
472 | 472 | |
|
|
473 | 473 | ELEMENTNAME = 'ProcUnit' |
|
|
474 | 474 | |
|
|
475 | 475 | def __init__(self): |
|
|
476 | 476 | |
|
|
477 | 477 | self.id = None |
|
|
478 | 478 | self.datatype = None |
|
|
479 | 479 | self.name = None |
|
|
480 | 480 | self.inputId = None |
|
|
481 | 481 | |
|
|
482 | 482 | self.opConfObjList = [] |
|
|
483 | 483 | |
|
|
484 | 484 | self.procUnitObj = None |
|
|
485 | 485 | self.opObjDict = {} |
|
|
486 | 486 | |
|
|
487 | 487 | def __getPriority(self): |
|
|
488 | 488 | |
|
|
489 | 489 | return len(self.opConfObjList)+1 |
|
|
490 | 490 | |
|
|
491 | 491 | def __getNewId(self): |
|
|
492 | 492 | |
|
|
493 | 493 | return int(self.id)*10 + len(self.opConfObjList) + 1 |
|
|
494 | 494 | |
|
|
495 | 495 | def getElementName(self): |
|
|
496 | 496 | |
|
|
497 | 497 | return self.ELEMENTNAME |
|
|
498 | 498 | |
|
|
499 | 499 | def getId(self): |
|
|
500 | 500 | |
|
|
501 | 501 | return self.id |
|
|
502 | 502 | |
|
|
503 | 503 | def updateId(self, new_id, parentId=parentId): |
|
|
504 | 504 | |
|
|
505 | 505 | |
|
|
506 | 506 | new_id = int(parentId)*10 + (int(self.id) % 10) |
|
|
507 | 507 | new_inputId = int(parentId)*10 + (int(self.inputId) % 10) |
|
|
508 | 508 | |
|
|
509 | 509 | #If this proc unit has not inputs |
|
|
510 | 510 | if self.inputId == '0': |
|
|
511 | 511 | new_inputId = 0 |
|
|
512 | 512 | |
|
|
513 | 513 | n = 1 |
|
|
514 | 514 | for opConfObj in self.opConfObjList: |
|
|
515 | 515 | |
|
|
516 | 516 | idOp = str(int(new_id)*10 + n) |
|
|
517 | 517 | opConfObj.updateId(idOp) |
|
|
518 | 518 | |
|
|
519 | 519 | n += 1 |
|
|
520 | 520 | |
|
|
521 | 521 | self.parentId = str(parentId) |
|
|
522 | 522 | self.id = str(new_id) |
|
|
523 | 523 | self.inputId = str(new_inputId) |
|
|
524 | 524 | |
|
|
525 | 525 | |
|
|
526 | 526 | def getInputId(self): |
|
|
527 | 527 | |
|
|
528 | 528 | return self.inputId |
|
|
529 | 529 | |
|
|
530 | 530 | def getOperationObjList(self): |
|
|
531 | 531 | |
|
|
532 | 532 | return self.opConfObjList |
|
|
533 | 533 | |
|
|
534 | 534 | def getOperationObj(self, name=None): |
|
|
535 | 535 | |
|
|
536 | 536 | for opConfObj in self.opConfObjList: |
|
|
537 | 537 | |
|
|
538 | 538 | if opConfObj.name != name: |
|
|
539 | 539 | continue |
|
|
540 | 540 | |
|
|
541 | 541 | return opConfObj |
|
|
542 | 542 | |
|
|
543 | 543 | return None |
|
|
544 | 544 | |
|
|
545 | 545 | def getOpObjfromParamValue(self, value=None): |
|
|
546 | 546 | |
|
|
547 | 547 | for opConfObj in self.opConfObjList: |
|
|
548 | 548 | if opConfObj.getParameterObjfromValue(parameterValue=value) != value: |
|
|
549 | 549 | continue |
|
|
550 | 550 | return opConfObj |
|
|
551 | 551 | return None |
|
|
552 | 552 | |
|
|
553 | 553 | def getProcUnitObj(self): |
|
|
554 | 554 | |
|
|
555 | 555 | return self.procUnitObj |
|
|
556 | 556 | |
|
|
557 | 557 | def setup(self, id, name, datatype, inputId, parentId=None): |
|
|
558 | 558 | |
|
|
559 | 559 | #Compatible with old signal chain version |
|
|
560 | 560 | if datatype==None and name==None: |
|
|
561 | 561 | raise ValueError, "datatype or name should be defined" |
|
|
562 | 562 | |
|
|
563 | 563 | if name==None: |
|
|
564 | 564 | if 'Proc' in datatype: |
|
|
565 | 565 | name = datatype |
|
|
566 | 566 | else: |
|
|
567 | 567 | name = '%sProc' %(datatype) |
|
|
568 | 568 | |
|
|
569 | 569 | if datatype==None: |
|
|
570 | 570 | datatype = name.replace('Proc','') |
|
|
571 | 571 | |
|
|
572 | 572 | self.id = str(id) |
|
|
573 | 573 | self.name = name |
|
|
574 | 574 | self.datatype = datatype |
|
|
575 | 575 | self.inputId = inputId |
|
|
576 | 576 | self.parentId = parentId |
|
|
577 | 577 | |
|
|
578 | 578 | self.opConfObjList = [] |
|
|
579 | 579 | |
|
|
580 | 580 | self.addOperation(name='run', optype='self') |
|
|
581 | 581 | |
|
|
582 | 582 | def removeOperations(self): |
|
|
583 | 583 | |
|
|
584 | 584 | for obj in self.opConfObjList: |
|
|
585 | 585 | del obj |
|
|
586 | 586 | |
|
|
587 | 587 | self.opConfObjList = [] |
|
|
588 | 588 | self.addOperation(name='run') |
|
|
589 | 589 | |
|
|
590 | 590 | def addParameter(self, **kwargs): |
|
|
591 | 591 | ''' |
|
|
592 | 592 | Add parameters to "run" operation |
|
|
593 | 593 | ''' |
|
|
594 | 594 | opObj = self.opConfObjList[0] |
|
|
595 | 595 | |
|
|
596 | 596 | opObj.addParameter(**kwargs) |
|
|
597 | 597 | |
|
|
598 | 598 | return opObj |
|
|
599 | 599 | |
|
|
600 | 600 | def addOperation(self, name, optype='self'): |
|
|
601 | 601 | |
|
|
602 | 602 | id = self.__getNewId() |
|
|
603 | 603 | priority = self.__getPriority() |
|
|
604 | 604 | |
|
|
605 | 605 | opConfObj = OperationConf() |
|
|
606 | 606 | opConfObj.setup(id, name=name, priority=priority, type=optype) |
|
|
607 | 607 | |
|
|
608 | 608 | self.opConfObjList.append(opConfObj) |
|
|
609 | 609 | |
|
|
610 | 610 | return opConfObj |
|
|
611 | 611 | |
|
|
612 | 612 | def makeXml(self, projectElement): |
|
|
613 | 613 | |
|
|
614 | 614 | procUnitElement = SubElement(projectElement, self.ELEMENTNAME) |
|
|
615 | 615 | procUnitElement.set('id', str(self.id)) |
|
|
616 | 616 | procUnitElement.set('name', self.name) |
|
|
617 | 617 | procUnitElement.set('datatype', self.datatype) |
|
|
618 | 618 | procUnitElement.set('inputId', str(self.inputId)) |
|
|
619 | 619 | |
|
|
620 | 620 | for opConfObj in self.opConfObjList: |
|
|
621 | 621 | opConfObj.makeXml(procUnitElement) |
|
|
622 | 622 | |
|
|
623 | 623 | def readXml(self, upElement): |
|
|
624 | 624 | |
|
|
625 | 625 | self.id = upElement.get('id') |
|
|
626 | 626 | self.name = upElement.get('name') |
|
|
627 | 627 | self.datatype = upElement.get('datatype') |
|
|
628 | 628 | self.inputId = upElement.get('inputId') |
|
|
629 | 629 | |
|
|
630 | 630 | if self.ELEMENTNAME == "ReadUnit": |
|
|
631 | 631 | self.datatype = self.datatype.replace("Reader", "") |
|
|
632 | 632 | |
|
|
633 | 633 | if self.ELEMENTNAME == "ProcUnit": |
|
|
634 | 634 | self.datatype = self.datatype.replace("Proc", "") |
|
|
635 | 635 | |
|
|
636 | 636 | if self.inputId == 'None': |
|
|
637 | 637 | self.inputId = '0' |
|
|
638 | 638 | |
|
|
639 | 639 | self.opConfObjList = [] |
|
|
640 | 640 | |
|
|
641 | 641 | opElementList = upElement.iter(OperationConf().getElementName()) |
|
|
642 | 642 | |
|
|
643 | 643 | for opElement in opElementList: |
|
|
644 | 644 | opConfObj = OperationConf() |
|
|
645 | 645 | opConfObj.readXml(opElement) |
|
|
646 | 646 | self.opConfObjList.append(opConfObj) |
|
|
647 | 647 | |
|
|
648 | 648 | def printattr(self): |
|
|
649 | 649 | |
|
|
650 | 650 | print "%s[%s]: name = %s, datatype = %s, inputId = %s" %(self.ELEMENTNAME, |
|
|
651 | 651 | self.id, |
|
|
652 | 652 | self.name, |
|
|
653 | 653 | self.datatype, |
|
|
654 | 654 | self.inputId) |
|
|
655 | 655 | |
|
|
656 | 656 | for opConfObj in self.opConfObjList: |
|
|
657 | 657 | opConfObj.printattr() |
|
|
658 | 658 | |
|
|
659 | 659 | |
|
|
660 | 660 | def getKwargs(self): |
|
|
661 | 661 | |
|
|
662 | 662 | opObj = self.opConfObjList[0] |
|
|
663 | 663 | kwargs = opObj.getKwargs() |
|
|
664 | 664 | |
|
|
665 | 665 | return kwargs |
|
|
666 | 666 | |
|
|
667 | 667 | def createObjects(self, plotter_queue=None): |
|
|
668 | 668 | |
|
|
669 | 669 | className = eval(self.name) |
|
|
670 | 670 | kwargs = self.getKwargs() |
|
|
671 | 671 | procUnitObj = className(**kwargs) |
|
|
672 | 672 | |
|
|
673 | 673 | for opConfObj in self.opConfObjList: |
|
|
674 | 674 | |
|
|
675 | 675 | if opConfObj.type=='self' and self.name=='run': |
|
|
676 | 676 | continue |
|
|
677 | 677 | elif opConfObj.type=='self': |
|
|
678 | 678 | procUnitObj.addOperationKwargs(opConfObj.id, **opConfObj.getKwargs()) |
|
|
679 | 679 | continue |
|
|
680 | 680 | |
|
|
681 | 681 | opObj = opConfObj.createObject(plotter_queue) |
|
|
682 | 682 | |
|
|
683 | 683 | self.opObjDict[opConfObj.id] = opObj |
|
|
684 | 684 | |
|
|
685 | 685 | procUnitObj.addOperation(opObj, opConfObj.id) |
|
|
686 | 686 | |
|
|
687 | 687 | self.procUnitObj = procUnitObj |
|
|
688 | 688 | |
|
|
689 | 689 | return procUnitObj |
|
|
690 | 690 | |
|
|
691 | 691 | def run(self): |
|
|
692 | 692 | |
|
|
693 | 693 | is_ok = False |
|
|
694 | 694 | |
|
|
695 | 695 | for opConfObj in self.opConfObjList: |
|
|
696 | 696 | |
|
|
697 | 697 | kwargs = {} |
|
|
698 | 698 | for parmConfObj in opConfObj.getParameterObjList(): |
|
|
699 | 699 | if opConfObj.name == 'run' and parmConfObj.name == 'datatype': |
|
|
700 | 700 | continue |
|
|
701 | 701 | |
|
|
702 | 702 | kwargs[parmConfObj.name] = parmConfObj.getValue() |
|
|
703 | 703 | |
|
|
704 | 704 | #ini = time.time() |
|
|
705 | 705 | |
|
|
706 | 706 | #print "\tRunning the '%s' operation with %s" %(opConfObj.name, opConfObj.id) |
|
|
707 | 707 | sts = self.procUnitObj.call(opType = opConfObj.type, |
|
|
708 | 708 | opName = opConfObj.name, |
|
|
709 | 709 | opId = opConfObj.id, |
|
|
710 | 710 | ) |
|
|
711 | 711 | |
|
|
712 | 712 | # total_time = time.time() - ini |
|
|
713 | 713 | # |
|
|
714 | 714 | # if total_time > 0.002: |
|
|
715 | 715 | # print "%s::%s took %f seconds" %(self.name, opConfObj.name, total_time) |
|
|
716 | 716 | |
|
|
717 | 717 | is_ok = is_ok or sts |
|
|
718 | 718 | |
|
|
719 | 719 | return is_ok |
|
|
720 | 720 | |
|
|
721 | 721 | def close(self): |
|
|
722 | 722 | |
|
|
723 | 723 | for opConfObj in self.opConfObjList: |
|
|
724 | 724 | if opConfObj.type == 'self': |
|
|
725 | 725 | continue |
|
|
726 | 726 | |
|
|
727 | 727 | opObj = self.procUnitObj.getOperationObj(opConfObj.id) |
|
|
728 | 728 | opObj.close() |
|
|
729 | 729 | |
|
|
730 | 730 | self.procUnitObj.close() |
|
|
731 | 731 | |
|
|
732 | 732 | return |
|
|
733 | 733 | |
|
|
734 | 734 | class ReadUnitConf(ProcUnitConf): |
|
|
735 | 735 | |
|
|
736 | 736 | path = None |
|
|
737 | 737 | startDate = None |
|
|
738 | 738 | endDate = None |
|
|
739 | 739 | startTime = None |
|
|
740 | 740 | endTime = None |
|
|
741 | 741 | |
|
|
742 | 742 | ELEMENTNAME = 'ReadUnit' |
|
|
743 | 743 | |
|
|
744 | 744 | def __init__(self): |
|
|
745 | 745 | |
|
|
746 | 746 | self.id = None |
|
|
747 | 747 | self.datatype = None |
|
|
748 | 748 | self.name = None |
|
|
749 | 749 | self.inputId = None |
|
|
750 | 750 | |
|
|
751 | 751 | self.parentId = None |
|
|
752 | 752 | |
|
|
753 | 753 | self.opConfObjList = [] |
|
|
754 | 754 | self.opObjList = [] |
|
|
755 | 755 | |
|
|
756 | 756 | def getElementName(self): |
|
|
757 | 757 | |
|
|
758 | 758 | return self.ELEMENTNAME |
|
|
759 | 759 | |
|
|
760 | 760 | def setup(self, id, name, datatype, path, startDate="", endDate="", startTime="", endTime="", parentId=None, queue=None, **kwargs): |
|
|
761 | 761 | |
|
|
762 | 762 | #Compatible with old signal chain version |
|
|
763 | 763 | if datatype==None and name==None: |
|
|
764 | 764 | raise ValueError, "datatype or name should be defined" |
|
|
765 | 765 | |
|
|
766 | 766 | if name==None: |
|
|
767 | 767 | if 'Reader' in datatype: |
|
|
768 | 768 | name = datatype |
|
|
769 | 769 | else: |
|
|
770 | 770 | name = '%sReader' %(datatype) |
|
|
771 | 771 | |
|
|
772 | 772 | if datatype==None: |
|
|
773 | 773 | datatype = name.replace('Reader','') |
|
|
774 | 774 | |
|
|
775 | 775 | self.id = id |
|
|
776 | 776 | self.name = name |
|
|
777 | 777 | self.datatype = datatype |
|
|
778 | 778 | |
|
|
779 | 779 | self.path = os.path.abspath(path) |
|
|
780 | 780 | self.startDate = startDate |
|
|
781 | 781 | self.endDate = endDate |
|
|
782 | 782 | self.startTime = startTime |
|
|
783 | 783 | self.endTime = endTime |
|
|
784 | 784 | |
|
|
785 | 785 | self.inputId = '0' |
|
|
786 | 786 | self.parentId = parentId |
|
|
787 | 787 | self.queue = queue |
|
|
788 | 788 | self.addRunOperation(**kwargs) |
|
|
789 | 789 | |
|
|
790 | 790 | def update(self, datatype, path, startDate, endDate, startTime, endTime, parentId=None, name=None, **kwargs): |
|
|
791 | 791 | |
|
|
792 | 792 | #Compatible with old signal chain version |
|
|
793 | 793 | if datatype==None and name==None: |
|
|
794 | 794 | raise ValueError, "datatype or name should be defined" |
|
|
795 | 795 | |
|
|
796 | 796 | if name==None: |
|
|
797 | 797 | if 'Reader' in datatype: |
|
|
798 | 798 | name = datatype |
|
|
799 | 799 | else: |
|
|
800 | 800 | name = '%sReader' %(datatype) |
|
|
801 | 801 | |
|
|
802 | 802 | if datatype==None: |
|
|
803 | 803 | datatype = name.replace('Reader','') |
|
|
804 | 804 | |
|
|
805 | 805 | self.datatype = datatype |
|
|
806 | 806 | self.name = name |
|
|
807 | 807 | self.path = path |
|
|
808 | 808 | self.startDate = startDate |
|
|
809 | 809 | self.endDate = endDate |
|
|
810 | 810 | self.startTime = startTime |
|
|
811 | 811 | self.endTime = endTime |
|
|
812 | 812 | |
|
|
813 | 813 | self.inputId = '0' |
|
|
814 | 814 | self.parentId = parentId |
|
|
815 | 815 | |
|
|
816 | 816 | self.updateRunOperation(**kwargs) |
|
|
817 | 817 | |
|
|
818 | 818 | def removeOperations(self): |
|
|
819 | 819 | |
|
|
820 | 820 | for obj in self.opConfObjList: |
|
|
821 | 821 | del obj |
|
|
822 | 822 | |
|
|
823 | 823 | self.opConfObjList = [] |
|
|
824 | 824 | |
|
|
825 | 825 | def addRunOperation(self, **kwargs): |
|
|
826 | 826 | |
|
|
827 | 827 | opObj = self.addOperation(name = 'run', optype = 'self') |
|
|
828 | 828 | |
|
|
829 | 829 | opObj.addParameter(name='datatype' , value=self.datatype, format='str') |
|
|
830 | 830 | opObj.addParameter(name='path' , value=self.path, format='str') |
|
|
831 | 831 | opObj.addParameter(name='startDate' , value=self.startDate, format='date') |
|
|
832 | 832 | opObj.addParameter(name='endDate' , value=self.endDate, format='date') |
|
|
833 | 833 | opObj.addParameter(name='startTime' , value=self.startTime, format='time') |
|
|
834 | 834 | opObj.addParameter(name='endTime' , value=self.endTime, format='time') |
|
|
835 | 835 | opObj.addParameter(name='queue' , value=self.queue, format='obj') |
|
|
836 | 836 | |
|
|
837 | 837 | for key, value in kwargs.items(): |
|
|
838 | 838 | opObj.addParameter(name=key, value=value, format=type(value).__name__) |
|
|
839 | 839 | |
|
|
840 | 840 | return opObj |
|
|
841 | 841 | |
|
|
842 | 842 | def updateRunOperation(self, **kwargs): |
|
|
843 | 843 | |
|
|
844 | 844 | opObj = self.getOperationObj(name = 'run') |
|
|
845 | 845 | opObj.removeParameters() |
|
|
846 | 846 | |
|
|
847 | 847 | opObj.addParameter(name='datatype' , value=self.datatype, format='str') |
|
|
848 | 848 | opObj.addParameter(name='path' , value=self.path, format='str') |
|
|
849 | 849 | opObj.addParameter(name='startDate' , value=self.startDate, format='date') |
|
|
850 | 850 | opObj.addParameter(name='endDate' , value=self.endDate, format='date') |
|
|
851 | 851 | opObj.addParameter(name='startTime' , value=self.startTime, format='time') |
|
|
852 | 852 | opObj.addParameter(name='endTime' , value=self.endTime, format='time') |
|
|
853 | 853 | |
|
|
854 | 854 | for key, value in kwargs.items(): |
|
|
855 | 855 | opObj.addParameter(name=key, value=value, format=type(value).__name__) |
|
|
856 | 856 | |
|
|
857 | 857 | return opObj |
|
|
858 | 858 | |
|
|
859 | 859 | # def makeXml(self, projectElement): |
|
|
860 | 860 | # |
|
|
861 | 861 | # procUnitElement = SubElement(projectElement, self.ELEMENTNAME) |
|
|
862 | 862 | # procUnitElement.set('id', str(self.id)) |
|
|
863 | 863 | # procUnitElement.set('name', self.name) |
|
|
864 | 864 | # procUnitElement.set('datatype', self.datatype) |
|
|
865 | 865 | # procUnitElement.set('inputId', str(self.inputId)) |
|
|
866 | 866 | # |
|
|
867 | 867 | # for opConfObj in self.opConfObjList: |
|
|
868 | 868 | # opConfObj.makeXml(procUnitElement) |
|
|
869 | 869 | |
|
|
870 | 870 | def readXml(self, upElement): |
|
|
871 | 871 | |
|
|
872 | 872 | self.id = upElement.get('id') |
|
|
873 | 873 | self.name = upElement.get('name') |
|
|
874 | 874 | self.datatype = upElement.get('datatype') |
|
|
875 | 875 | self.inputId = upElement.get('inputId') |
|
|
876 | 876 | |
|
|
877 | 877 | if self.ELEMENTNAME == "ReadUnit": |
|
|
878 | 878 | self.datatype = self.datatype.replace("Reader", "") |
|
|
879 | 879 | |
|
|
880 | 880 | if self.inputId == 'None': |
|
|
881 | 881 | self.inputId = '0' |
|
|
882 | 882 | |
|
|
883 | 883 | self.opConfObjList = [] |
|
|
884 | 884 | |
|
|
885 | 885 | opElementList = upElement.iter(OperationConf().getElementName()) |
|
|
886 | 886 | |
|
|
887 | 887 | for opElement in opElementList: |
|
|
888 | 888 | opConfObj = OperationConf() |
|
|
889 | 889 | opConfObj.readXml(opElement) |
|
|
890 | 890 | self.opConfObjList.append(opConfObj) |
|
|
891 | 891 | |
|
|
892 | 892 | if opConfObj.name == 'run': |
|
|
893 | 893 | self.path = opConfObj.getParameterValue('path') |
|
|
894 | 894 | self.startDate = opConfObj.getParameterValue('startDate') |
|
|
895 | 895 | self.endDate = opConfObj.getParameterValue('endDate') |
|
|
896 | 896 | self.startTime = opConfObj.getParameterValue('startTime') |
|
|
897 | 897 | self.endTime = opConfObj.getParameterValue('endTime') |
|
|
898 | 898 | |
|
|
899 | 899 | class Project(): |
|
|
900 | 900 | |
|
|
901 | 901 | id = None |
|
|
902 | 902 | name = None |
|
|
903 | 903 | description = None |
|
|
904 | 904 | filename = None |
|
|
905 | 905 | |
|
|
906 | 906 | procUnitConfObjDict = None |
|
|
907 | 907 | |
|
|
908 | 908 | ELEMENTNAME = 'Project' |
|
|
909 | 909 | |
|
|
910 | 910 | plotterQueue = None |
|
|
911 | 911 | |
|
|
912 | 912 | def __init__(self, plotter_queue=None): |
|
|
913 | 913 | |
|
|
914 | 914 | self.id = None |
|
|
915 | 915 | self.name = None |
|
|
916 | 916 | self.description = None |
|
|
917 | 917 | |
|
|
918 | 918 | self.plotterQueue = plotter_queue |
|
|
919 | 919 | |
|
|
920 | 920 | self.procUnitConfObjDict = {} |
|
|
921 | 921 | |
|
|
922 | 922 | def __getNewId(self): |
|
|
923 | 923 | |
|
|
924 | 924 | idList = self.procUnitConfObjDict.keys() |
|
|
925 | 925 | |
|
|
926 | 926 | id = int(self.id)*10 |
|
|
927 | 927 | |
|
|
928 | 928 | while True: |
|
|
929 | 929 | id += 1 |
|
|
930 | 930 | |
|
|
931 | 931 | if str(id) in idList: |
|
|
932 | 932 | continue |
|
|
933 | 933 | |
|
|
934 | 934 | break |
|
|
935 | 935 | |
|
|
936 | 936 | return str(id) |
|
|
937 | 937 | |
|
|
938 | 938 | def getElementName(self): |
|
|
939 | 939 | |
|
|
940 | 940 | return self.ELEMENTNAME |
|
|
941 | 941 | |
|
|
942 | 942 | def getId(self): |
|
|
943 | 943 | |
|
|
944 | 944 | return self.id |
|
|
945 | 945 | |
|
|
946 | 946 | def updateId(self, new_id): |
|
|
947 | 947 | |
|
|
948 | 948 | self.id = str(new_id) |
|
|
949 | 949 | |
|
|
950 | 950 | keyList = self.procUnitConfObjDict.keys() |
|
|
951 | 951 | keyList.sort() |
|
|
952 | 952 | |
|
|
953 | 953 | n = 1 |
|
|
954 | 954 | newProcUnitConfObjDict = {} |
|
|
955 | 955 | |
|
|
956 | 956 | for procKey in keyList: |
|
|
957 | 957 | |
|
|
958 | 958 | procUnitConfObj = self.procUnitConfObjDict[procKey] |
|
|
959 | 959 | idProcUnit = str(int(self.id)*10 + n) |
|
|
960 | 960 | procUnitConfObj.updateId(idProcUnit, parentId = self.id) |
|
|
961 | 961 | |
|
|
962 | 962 | newProcUnitConfObjDict[idProcUnit] = procUnitConfObj |
|
|
963 | 963 | n += 1 |
|
|
964 | 964 | |
|
|
965 | 965 | self.procUnitConfObjDict = newProcUnitConfObjDict |
|
|
966 | 966 | |
|
|
967 | 967 | def setup(self, id, name, description): |
|
|
968 | 968 | |
|
|
969 | 969 | self.id = str(id) |
|
|
970 | 970 | self.name = name |
|
|
971 | 971 | self.description = description |
|
|
972 | 972 | |
|
|
973 | 973 | def update(self, name, description): |
|
|
974 | 974 | |
|
|
975 | 975 | self.name = name |
|
|
976 | 976 | self.description = description |
|
|
977 | 977 | |
|
|
978 | 978 | def addReadUnit(self, id=None, datatype=None, name=None, **kwargs): |
|
|
979 | 979 | |
|
|
980 | 980 | if id is None: |
|
|
981 | 981 | idReadUnit = self.__getNewId() |
|
|
982 | 982 | else: |
|
|
983 | 983 | idReadUnit = str(id) |
|
|
984 | 984 | |
|
|
985 | 985 | readUnitConfObj = ReadUnitConf() |
|
|
986 | 986 | readUnitConfObj.setup(idReadUnit, name, datatype, parentId=self.id, **kwargs) |
|
|
987 | 987 | |
|
|
988 | 988 | self.procUnitConfObjDict[readUnitConfObj.getId()] = readUnitConfObj |
|
|
989 | 989 | |
|
|
990 | 990 | return readUnitConfObj |
|
|
991 | 991 | |
|
|
992 | 992 | def addProcUnit(self, inputId='0', datatype=None, name=None): |
|
|
993 | 993 | |
|
|
994 | 994 | idProcUnit = self.__getNewId() |
|
|
995 | 995 | |
|
|
996 | 996 | procUnitConfObj = ProcUnitConf() |
|
|
997 | 997 | procUnitConfObj.setup(idProcUnit, name, datatype, inputId, parentId=self.id) |
|
|
998 | 998 | |
|
|
999 | 999 | self.procUnitConfObjDict[procUnitConfObj.getId()] = procUnitConfObj |
|
|
1000 | 1000 | |
|
|
1001 | 1001 | return procUnitConfObj |
|
|
1002 | 1002 | |
|
|
1003 | 1003 | def removeProcUnit(self, id): |
|
|
1004 | 1004 | |
|
|
1005 | 1005 | if id in self.procUnitConfObjDict.keys(): |
|
|
1006 | 1006 | self.procUnitConfObjDict.pop(id) |
|
|
1007 | 1007 | |
|
|
1008 | 1008 | def getReadUnitId(self): |
|
|
1009 | 1009 | |
|
|
1010 | 1010 | readUnitConfObj = self.getReadUnitObj() |
|
|
1011 | 1011 | |
|
|
1012 | 1012 | return readUnitConfObj.id |
|
|
1013 | 1013 | |
|
|
1014 | 1014 | def getReadUnitObj(self): |
|
|
1015 | 1015 | |
|
|
1016 | 1016 | for obj in self.procUnitConfObjDict.values(): |
|
|
1017 | 1017 | if obj.getElementName() == "ReadUnit": |
|
|
1018 | 1018 | return obj |
|
|
1019 | 1019 | |
|
|
1020 | 1020 | return None |
|
|
1021 | 1021 | |
|
|
1022 | 1022 | def getProcUnitObj(self, id=None, name=None): |
|
|
1023 | 1023 | |
|
|
1024 | 1024 | if id != None: |
|
|
1025 | 1025 | return self.procUnitConfObjDict[id] |
|
|
1026 | 1026 | |
|
|
1027 | 1027 | if name != None: |
|
|
1028 | 1028 | return self.getProcUnitObjByName(name) |
|
|
1029 | 1029 | |
|
|
1030 | 1030 | return None |
|
|
1031 | 1031 | |
|
|
1032 | 1032 | def getProcUnitObjByName(self, name): |
|
|
1033 | 1033 | |
|
|
1034 | 1034 | for obj in self.procUnitConfObjDict.values(): |
|
|
1035 | 1035 | if obj.name == name: |
|
|
1036 | 1036 | return obj |
|
|
1037 | 1037 | |
|
|
1038 | 1038 | return None |
|
|
1039 | 1039 | |
|
|
1040 | 1040 | def procUnitItems(self): |
|
|
1041 | 1041 | |
|
|
1042 | 1042 | return self.procUnitConfObjDict.items() |
|
|
1043 | 1043 | |
|
|
1044 | 1044 | def makeXml(self): |
|
|
1045 | 1045 | |
|
|
1046 | 1046 | projectElement = Element('Project') |
|
|
1047 | 1047 | projectElement.set('id', str(self.id)) |
|
|
1048 | 1048 | projectElement.set('name', self.name) |
|
|
1049 | 1049 | projectElement.set('description', self.description) |
|
|
1050 | 1050 | |
|
|
1051 | 1051 | for procUnitConfObj in self.procUnitConfObjDict.values(): |
|
|
1052 | 1052 | procUnitConfObj.makeXml(projectElement) |
|
|
1053 | 1053 | |
|
|
1054 | 1054 | self.projectElement = projectElement |
|
|
1055 | 1055 | |
|
|
1056 | 1056 | def writeXml(self, filename=None): |
|
|
1057 | 1057 | |
|
|
1058 | 1058 | if filename == None: |
|
|
1059 | 1059 | if self.filename: |
|
|
1060 | 1060 | filename = self.filename |
|
|
1061 | 1061 | else: |
|
|
1062 | 1062 | filename = "schain.xml" |
|
|
1063 | 1063 | |
|
|
1064 | 1064 | if not filename: |
|
|
1065 | 1065 | print "filename has not been defined. Use setFilename(filename) for do it." |
|
|
1066 | 1066 | return 0 |
|
|
1067 | 1067 | |
|
|
1068 | 1068 | abs_file = os.path.abspath(filename) |
|
|
1069 | 1069 | |
|
|
1070 | 1070 | if not os.access(os.path.dirname(abs_file), os.W_OK): |
|
|
1071 | 1071 | print "No write permission on %s" %os.path.dirname(abs_file) |
|
|
1072 | 1072 | return 0 |
|
|
1073 | 1073 | |
|
|
1074 | 1074 | if os.path.isfile(abs_file) and not(os.access(abs_file, os.W_OK)): |
|
|
1075 | 1075 | print "File %s already exists and it could not be overwriten" %abs_file |
|
|
1076 | 1076 | return 0 |
|
|
1077 | 1077 | |
|
|
1078 | 1078 | self.makeXml() |
|
|
1079 | 1079 | |
|
|
1080 | 1080 | ElementTree(self.projectElement).write(abs_file, method='xml') |
|
|
1081 | 1081 | |
|
|
1082 | 1082 | self.filename = abs_file |
|
|
1083 | 1083 | |
|
|
1084 | 1084 | return 1 |
|
|
1085 | 1085 | |
|
|
1086 | 1086 | def readXml(self, filename = None): |
|
|
1087 | 1087 | |
|
|
1088 | 1088 | if not filename: |
|
|
1089 | 1089 | print "filename is not defined" |
|
|
1090 | 1090 | return 0 |
|
|
1091 | 1091 | |
|
|
1092 | 1092 | abs_file = os.path.abspath(filename) |
|
|
1093 | 1093 | |
|
|
1094 | 1094 | if not os.path.isfile(abs_file): |
|
|
1095 | 1095 | print "%s file does not exist" %abs_file |
|
|
1096 | 1096 | return 0 |
|
|
1097 | 1097 | |
|
|
1098 | 1098 | self.projectElement = None |
|
|
1099 | 1099 | self.procUnitConfObjDict = {} |
|
|
1100 | 1100 | |
|
|
1101 | 1101 | try: |
|
|
1102 | 1102 | self.projectElement = ElementTree().parse(abs_file) |
|
|
1103 | 1103 | except: |
|
|
1104 | 1104 | print "Error reading %s, verify file format" %filename |
|
|
1105 | 1105 | return 0 |
|
|
1106 | 1106 | |
|
|
1107 | 1107 | self.project = self.projectElement.tag |
|
|
1108 | 1108 | |
|
|
1109 | 1109 | self.id = self.projectElement.get('id') |
|
|
1110 | 1110 | self.name = self.projectElement.get('name') |
|
|
1111 | 1111 | self.description = self.projectElement.get('description') |
|
|
1112 | 1112 | |
|
|
1113 | 1113 | readUnitElementList = self.projectElement.iter(ReadUnitConf().getElementName()) |
|
|
1114 | 1114 | |
|
|
1115 | 1115 | for readUnitElement in readUnitElementList: |
|
|
1116 | 1116 | readUnitConfObj = ReadUnitConf() |
|
|
1117 | 1117 | readUnitConfObj.readXml(readUnitElement) |
|
|
1118 | 1118 | |
|
|
1119 | 1119 | if readUnitConfObj.parentId == None: |
|
|
1120 | 1120 | readUnitConfObj.parentId = self.id |
|
|
1121 | 1121 | |
|
|
1122 | 1122 | self.procUnitConfObjDict[readUnitConfObj.getId()] = readUnitConfObj |
|
|
1123 | 1123 | |
|
|
1124 | 1124 | procUnitElementList = self.projectElement.iter(ProcUnitConf().getElementName()) |
|
|
1125 | 1125 | |
|
|
1126 | 1126 | for procUnitElement in procUnitElementList: |
|
|
1127 | 1127 | procUnitConfObj = ProcUnitConf() |
|
|
1128 | 1128 | procUnitConfObj.readXml(procUnitElement) |
|
|
1129 | 1129 | |
|
|
1130 | 1130 | if procUnitConfObj.parentId == None: |
|
|
1131 | 1131 | procUnitConfObj.parentId = self.id |
|
|
1132 | 1132 | |
|
|
1133 | 1133 | self.procUnitConfObjDict[procUnitConfObj.getId()] = procUnitConfObj |
|
|
1134 | 1134 | |
|
|
1135 | 1135 | self.filename = abs_file |
|
|
1136 | 1136 | |
|
|
1137 | 1137 | return 1 |
|
|
1138 | 1138 | |
|
|
1139 | 1139 | def printattr(self): |
|
|
1140 | 1140 | |
|
|
1141 | 1141 | print "Project[%s]: name = %s, description = %s" %(self.id, |
|
|
1142 | 1142 | self.name, |
|
|
1143 | 1143 | self.description) |
|
|
1144 | 1144 | |
|
|
1145 | 1145 | for procUnitConfObj in self.procUnitConfObjDict.values(): |
|
|
1146 | 1146 | procUnitConfObj.printattr() |
|
|
1147 | 1147 | |
|
|
1148 | 1148 | def createObjects(self): |
|
|
1149 | 1149 | |
|
|
1150 | 1150 | for procUnitConfObj in self.procUnitConfObjDict.values(): |
|
|
1151 | 1151 | procUnitConfObj.createObjects(self.plotterQueue) |
|
|
1152 | 1152 | |
|
|
1153 | 1153 | def __connect(self, objIN, thisObj): |
|
|
1154 | 1154 | |
|
|
1155 | 1155 | thisObj.setInput(objIN.getOutputObj()) |
|
|
1156 | 1156 | |
|
|
1157 | 1157 | def connectObjects(self): |
|
|
1158 | 1158 | |
|
|
1159 | 1159 | for thisPUConfObj in self.procUnitConfObjDict.values(): |
|
|
1160 | 1160 | |
|
|
1161 | 1161 | inputId = thisPUConfObj.getInputId() |
|
|
1162 | 1162 | |
|
|
1163 | 1163 | if int(inputId) == 0: |
|
|
1164 | 1164 | continue |
|
|
1165 | 1165 | |
|
|
1166 | 1166 | #Get input object |
|
|
1167 | 1167 | puConfINObj = self.procUnitConfObjDict[inputId] |
|
|
1168 | 1168 | puObjIN = puConfINObj.getProcUnitObj() |
|
|
1169 | 1169 | |
|
|
1170 | 1170 | #Get current object |
|
|
1171 | 1171 | thisPUObj = thisPUConfObj.getProcUnitObj() |
|
|
1172 | 1172 | |
|
|
1173 | 1173 | self.__connect(puObjIN, thisPUObj) |
|
|
1174 | 1174 | |
|
|
1175 | 1175 | def __handleError(self, procUnitConfObj, send_email=True): |
|
|
1176 | 1176 | |
|
|
1177 | 1177 | import socket |
|
|
1178 | 1178 | |
|
|
1179 | 1179 | err = traceback.format_exception(sys.exc_info()[0], |
|
|
1180 | 1180 | sys.exc_info()[1], |
|
|
1181 | 1181 | sys.exc_info()[2]) |
|
|
1182 | 1182 | |
|
|
1183 | 1183 | print "***** Error occurred in %s *****" %(procUnitConfObj.name) |
|
|
1184 | 1184 | print "***** %s" %err[-1] |
|
|
1185 | 1185 | |
|
|
1186 | 1186 | message = "".join(err) |
|
|
1187 | 1187 | |
|
|
1188 | 1188 | sys.stderr.write(message) |
|
|
1189 | 1189 | |
|
|
1190 | 1190 | if not send_email: |
|
|
1191 | 1191 | return |
|
|
1192 | 1192 | |
|
|
1193 | 1193 | subject = "SChain v%s: Error running %s\n" %(schainpy.__version__, procUnitConfObj.name) |
|
|
1194 | 1194 | |
|
|
1195 | 1195 | subtitle = "%s: %s\n" %(procUnitConfObj.getElementName() ,procUnitConfObj.name) |
|
|
1196 | 1196 | subtitle += "Hostname: %s\n" %socket.gethostbyname(socket.gethostname()) |
|
|
1197 | 1197 | subtitle += "Working directory: %s\n" %os.path.abspath("./") |
|
|
1198 | 1198 | subtitle += "Configuration file: %s\n" %self.filename |
|
|
1199 | 1199 | subtitle += "Time: %s\n" %str(datetime.datetime.now()) |
|
|
1200 | 1200 | |
|
|
1201 | 1201 | readUnitConfObj = self.getReadUnitObj() |
|
|
1202 | 1202 | if readUnitConfObj: |
|
|
1203 | 1203 | subtitle += "\nInput parameters:\n" |
|
|
1204 | 1204 | subtitle += "[Data path = %s]\n" %readUnitConfObj.path |
|
|
1205 | 1205 | subtitle += "[Data type = %s]\n" %readUnitConfObj.datatype |
|
|
1206 | 1206 | subtitle += "[Start date = %s]\n" %readUnitConfObj.startDate |
|
|
1207 | 1207 | subtitle += "[End date = %s]\n" %readUnitConfObj.endDate |
|
|
1208 | 1208 | subtitle += "[Start time = %s]\n" %readUnitConfObj.startTime |
|
|
1209 | 1209 | subtitle += "[End time = %s]\n" %readUnitConfObj.endTime |
|
|
1210 | 1210 | |
|
|
1211 | 1211 | adminObj = schainpy.admin.SchainNotify() |
|
|
1212 | 1212 | adminObj.sendAlert(message=message, |
|
|
1213 | 1213 | subject=subject, |
|
|
1214 | 1214 | subtitle=subtitle, |
|
|
1215 | 1215 | filename=self.filename) |
|
|
1216 | 1216 | |
|
|
1217 | 1217 | def isPaused(self): |
|
|
1218 | 1218 | return 0 |
|
|
1219 | 1219 | |
|
|
1220 | 1220 | def isStopped(self): |
|
|
1221 | 1221 | return 0 |
|
|
1222 | 1222 | |
|
|
1223 | 1223 | def runController(self): |
|
|
1224 | 1224 | """ |
|
|
1225 | 1225 | returns 0 when this process has been stopped, 1 otherwise |
|
|
1226 | 1226 | """ |
|
|
1227 | 1227 | |
|
|
1228 | 1228 | if self.isPaused(): |
|
|
1229 | 1229 | print "Process suspended" |
|
|
1230 | 1230 | |
|
|
1231 | 1231 | while True: |
|
|
1232 | 1232 | sleep(0.1) |
|
|
1233 | 1233 | |
|
|
1234 | 1234 | if not self.isPaused(): |
|
|
1235 | 1235 | break |
|
|
1236 | 1236 | |
|
|
1237 | 1237 | if self.isStopped(): |
|
|
1238 | 1238 | break |
|
|
1239 | 1239 | |
|
|
1240 | 1240 | print "Process reinitialized" |
|
|
1241 | 1241 | |
|
|
1242 | 1242 | if self.isStopped(): |
|
|
1243 | 1243 | print "Process stopped" |
|
|
1244 | 1244 | return 0 |
|
|
1245 | 1245 | |
|
|
1246 | 1246 | return 1 |
|
|
1247 | 1247 | |
|
|
1248 | 1248 | def setFilename(self, filename): |
|
|
1249 | 1249 | |
|
|
1250 | 1250 | self.filename = filename |
|
|
1251 | 1251 | |
|
|
1252 | 1252 | def setPlotterQueue(self, plotter_queue): |
|
|
1253 | 1253 | |
|
|
1254 | 1254 | raise NotImplementedError, "Use schainpy.controller_api.ControllerThread instead Project class" |
|
|
1255 | 1255 | |
|
|
1256 | 1256 | def getPlotterQueue(self): |
|
|
1257 | 1257 | |
|
|
1258 | 1258 | raise NotImplementedError, "Use schainpy.controller_api.ControllerThread instead Project class" |
|
|
1259 | 1259 | |
|
|
1260 | 1260 | def useExternalPlotter(self): |
|
|
1261 | 1261 | |
|
|
1262 | 1262 | raise NotImplementedError, "Use schainpy.controller_api.ControllerThread instead Project class" |
|
|
1263 | 1263 | |
|
|
1264 | 1264 | def run(self): |
|
|
1265 | 1265 | |
|
|
1266 | 1266 | |
|
|
1267 | 1267 | print "*"*60 |
|
|
1268 | 1268 | print " Starting SIGNAL CHAIN PROCESSING v%s " %schainpy.__version__ |
|
|
1269 | 1269 | print "*"*60 |
|
|
1270 | 1270 | |
|
|
1271 | 1271 | |
|
|
1272 | 1272 | keyList = self.procUnitConfObjDict.keys() |
|
|
1273 | 1273 | keyList.sort() |
|
|
1274 | 1274 | |
|
|
1275 | 1275 | while(True): |
|
|
1276 | 1276 | |
|
|
1277 | 1277 | is_ok = False |
|
|
1278 | 1278 | |
|
|
1279 | 1279 | for procKey in keyList: |
|
|
1280 | 1280 | # print "Running the '%s' process with %s" %(procUnitConfObj.name, procUnitConfObj.id) |
|
|
1281 | 1281 | |
|
|
1282 | 1282 | procUnitConfObj = self.procUnitConfObjDict[procKey] |
|
|
1283 | 1283 | |
|
|
1284 | 1284 | try: |
|
|
1285 | 1285 | sts = procUnitConfObj.run() |
|
|
1286 | 1286 | is_ok = is_ok or sts |
|
|
1287 | 1287 | except KeyboardInterrupt: |
|
|
1288 | 1288 | is_ok = False |
|
|
1289 | 1289 | break |
|
|
1290 | 1290 | except ValueError, e: |
|
|
1291 | 1291 | sleep(0.5) |
|
|
1292 | 1292 | self.__handleError(procUnitConfObj, send_email=True) |
|
|
1293 | 1293 | is_ok = False |
|
|
1294 | 1294 | break |
|
|
1295 | 1295 | except: |
|
|
1296 | 1296 | sleep(0.5) |
|
|
1297 | 1297 | self.__handleError(procUnitConfObj) |
|
|
1298 | 1298 | is_ok = False |
|
|
1299 | 1299 | break |
|
|
1300 | 1300 | |
|
|
1301 | 1301 | #If every process unit finished so end process |
|
|
1302 | 1302 | if not(is_ok): |
|
|
1303 | 1303 | # print "Every process unit have finished" |
|
|
1304 | 1304 | break |
|
|
1305 | 1305 | |
|
|
1306 | 1306 | if not self.runController(): |
|
|
1307 | 1307 | break |
|
|
1308 | 1308 | |
|
|
1309 | 1309 | #Closing every process |
|
|
1310 | 1310 | for procKey in keyList: |
|
|
1311 | 1311 | procUnitConfObj = self.procUnitConfObjDict[procKey] |
|
|
1312 | 1312 | procUnitConfObj.close() |
|
|
1313 | 1313 | |
|
|
1314 | 1314 | print "Process finished" |
|
|
1315 | 1315 | |
|
|
1316 | 1316 | def start(self): |
|
|
1317 | 1317 | |
|
|
1318 | 1318 | self.writeXml() |
|
|
1319 | 1319 | self.createObjects() |
|
|
1320 | 1320 | self.connectObjects() |
|
|
1321 | 1321 | self.run() |
|
|
1 | NO CONTENT: modified file |
| @@ -1,693 +1,707 | |||
|
|
1 | 1 | |
|
|
2 | 2 | import os |
|
|
3 | 3 | import zmq |
|
|
4 | 4 | import time |
|
|
5 | 5 | import numpy |
|
|
6 | 6 | import datetime |
|
|
7 | 7 | import numpy as np |
|
|
8 | 8 | import matplotlib |
|
|
9 | 9 | matplotlib.use('TkAgg') |
|
|
10 | 10 | import matplotlib.pyplot as plt |
|
|
11 | 11 | from mpl_toolkits.axes_grid1 import make_axes_locatable |
|
|
12 | 12 | from matplotlib.ticker import FuncFormatter, LinearLocator |
|
|
13 | 13 | from multiprocessing import Process |
|
|
14 | 14 | |
|
|
15 | 15 | from schainpy.model.proc.jroproc_base import Operation |
|
|
16 | 16 | |
|
|
17 | 17 | plt.ioff() |
|
|
18 | 18 | |
|
|
19 | 19 | func = lambda x, pos: ('%s') %(datetime.datetime.fromtimestamp(x).strftime('%H:%M')) |
|
|
20 | 20 | |
|
|
21 | 21 | d1970 = datetime.datetime(1970,1,1) |
|
|
22 | 22 | |
|
|
23 | 23 | class PlotData(Operation, Process): |
|
|
24 | 24 | |
|
|
25 | 25 | CODE = 'Figure' |
|
|
26 | 26 | colormap = 'jro' |
|
|
27 |
CONFLATE = |
|
|
|
27 | CONFLATE = False | |
|
|
28 | 28 | __MAXNUMX = 80 |
|
|
29 | __MAXNUMY = 80 | |
|
|
30 | 29 | __missing = 1E30 |
|
|
31 | 30 | |
|
|
32 | 31 | def __init__(self, **kwargs): |
|
|
33 | 32 | |
|
|
34 | 33 | Operation.__init__(self, plot=True, **kwargs) |
|
|
35 | 34 | Process.__init__(self) |
|
|
36 | 35 | self.kwargs['code'] = self.CODE |
|
|
37 | 36 | self.mp = False |
|
|
38 | 37 | self.dataOut = None |
|
|
39 | 38 | self.isConfig = False |
|
|
40 | 39 | self.figure = None |
|
|
41 | 40 | self.axes = [] |
|
|
42 | 41 | self.localtime = kwargs.pop('localtime', True) |
|
|
43 | 42 | self.show = kwargs.get('show', True) |
|
|
44 | 43 | self.save = kwargs.get('save', False) |
|
|
45 | 44 | self.colormap = kwargs.get('colormap', self.colormap) |
|
|
46 | 45 | self.colormap_coh = kwargs.get('colormap_coh', 'jet') |
|
|
47 | 46 | self.colormap_phase = kwargs.get('colormap_phase', 'RdBu_r') |
|
|
48 | 47 | self.showprofile = kwargs.get('showprofile', True) |
|
|
49 | 48 | self.title = kwargs.get('wintitle', '') |
|
|
50 | 49 | self.xaxis = kwargs.get('xaxis', 'frequency') |
|
|
51 | 50 | self.zmin = kwargs.get('zmin', None) |
|
|
52 | 51 | self.zmax = kwargs.get('zmax', None) |
|
|
53 | 52 | self.xmin = kwargs.get('xmin', None) |
|
|
54 | 53 | self.xmax = kwargs.get('xmax', None) |
|
|
55 | 54 | self.xrange = kwargs.get('xrange', 24) |
|
|
56 | 55 | self.ymin = kwargs.get('ymin', None) |
|
|
57 | 56 | self.ymax = kwargs.get('ymax', None) |
|
|
57 | self.__MAXNUMY = kwargs.get('decimation', 80) | |
|
|
58 | 58 | self.throttle_value = 5 |
|
|
59 | self.times = [] | |
|
|
59 | 60 | |
|
|
60 | 61 | def fill_gaps(self, x_buffer, y_buffer, z_buffer): |
|
|
61 | 62 | |
|
|
62 | 63 | if x_buffer.shape[0] < 2: |
|
|
63 | 64 | return x_buffer, y_buffer, z_buffer |
|
|
64 | 65 | |
|
|
65 | 66 | deltas = x_buffer[1:] - x_buffer[0:-1] |
|
|
66 | 67 | x_median = np.median(deltas) |
|
|
67 | 68 | |
|
|
68 | 69 | index = np.where(deltas > 5*x_median) |
|
|
69 | 70 | |
|
|
70 | 71 | if len(index[0]) != 0: |
|
|
71 | 72 | z_buffer[::, index[0], ::] = self.__missing |
|
|
72 | 73 | z_buffer = np.ma.masked_inside(z_buffer, |
|
|
73 | 74 | 0.99*self.__missing, |
|
|
74 | 75 | 1.01*self.__missing) |
|
|
75 | 76 | |
|
|
76 | 77 | return x_buffer, y_buffer, z_buffer |
|
|
77 | 78 | |
|
|
78 | 79 | def decimate(self): |
|
|
79 | 80 | |
|
|
80 | 81 | # dx = int(len(self.x)/self.__MAXNUMX) + 1 |
|
|
81 | 82 | dy = int(len(self.y)/self.__MAXNUMY) + 1 |
|
|
82 | 83 | |
|
|
83 | 84 | # x = self.x[::dx] |
|
|
84 | 85 | x = self.x |
|
|
85 | 86 | y = self.y[::dy] |
|
|
86 | 87 | z = self.z[::, ::, ::dy] |
|
|
87 | 88 | |
|
|
88 | 89 | return x, y, z |
|
|
89 | 90 | |
|
|
90 | 91 | def __plot(self): |
|
|
91 | 92 | |
|
|
92 | 93 | print 'plotting...{}'.format(self.CODE) |
|
|
93 | 94 | |
|
|
94 | 95 | if self.show: |
|
|
95 | 96 | print 'showing' |
|
|
96 | 97 | self.figure.show() |
|
|
97 | 98 | |
|
|
98 | 99 | self.plot() |
|
|
99 | 100 | plt.tight_layout() |
|
|
100 | 101 | self.figure.canvas.manager.set_window_title('{} {} - Date:{}'.format(self.title, self.CODE.upper(), |
|
|
101 | 102 | datetime.datetime.fromtimestamp(self.max_time).strftime('%y/%m/%d %H:%M:%S'))) |
|
|
102 | 103 | |
|
|
103 | 104 | if self.save: |
|
|
104 | 105 | figname = os.path.join(self.save, '{}_{}.png'.format(self.CODE, |
|
|
105 | 106 | datetime.datetime.fromtimestamp(self.saveTime).strftime('%y%m%d_%H%M%S'))) |
|
|
106 | 107 | print 'Saving figure: {}'.format(figname) |
|
|
107 | 108 | self.figure.savefig(figname) |
|
|
108 | 109 | |
|
|
109 | 110 | self.figure.canvas.draw() |
|
|
110 | 111 | |
|
|
111 | 112 | def plot(self): |
|
|
112 | 113 | |
|
|
113 | 114 | print 'plotting...{}'.format(self.CODE.upper()) |
|
|
114 | 115 | return |
|
|
115 | 116 | |
|
|
116 | 117 | def run(self): |
|
|
117 | 118 | |
|
|
118 | 119 | print '[Starting] {}'.format(self.name) |
|
|
119 | 120 | context = zmq.Context() |
|
|
120 | 121 | receiver = context.socket(zmq.SUB) |
|
|
121 | 122 | receiver.setsockopt(zmq.SUBSCRIBE, '') |
|
|
122 | 123 | receiver.setsockopt(zmq.CONFLATE, self.CONFLATE) |
|
|
123 | 124 | receiver.connect("ipc:///tmp/zmq.plots") |
|
|
124 | ||
|
|
125 | seconds_passed = 0 | |
|
|
125 | 126 | while True: |
|
|
126 | 127 | try: |
|
|
127 | self.data = receiver.recv_pyobj(flags=zmq.NOBLOCK) | |
|
|
128 | self.data = receiver.recv_pyobj(flags=zmq.NOBLOCK)#flags=zmq.NOBLOCK | |
|
|
129 | self.started = self.data['STARTED'] | |
|
|
128 | 130 | self.dataOut = self.data['dataOut'] |
|
|
131 | ||
|
|
132 | if (len(self.times) < len(self.data['times']) and not self.started and self.data['ENDED']): | |
|
|
133 | continue | |
|
|
134 | ||
|
|
129 | 135 | self.times = self.data['times'] |
|
|
130 | 136 | self.times.sort() |
|
|
131 | 137 | self.throttle_value = self.data['throttle'] |
|
|
132 | 138 | self.min_time = self.times[0] |
|
|
133 | 139 | self.max_time = self.times[-1] |
|
|
134 | 140 | |
|
|
135 | 141 | if self.isConfig is False: |
|
|
142 | print 'setting up' | |
|
|
136 | 143 | self.setup() |
|
|
137 | 144 | self.isConfig = True |
|
|
138 | 145 | self.__plot() |
|
|
139 | 146 | |
|
|
140 | 147 | if self.data['ENDED'] is True: |
|
|
148 | print '********GRAPHIC ENDED********' | |
|
|
149 | self.ended = True | |
|
|
141 | 150 | self.isConfig = False |
|
|
151 | self.__plot() | |
|
|
152 | elif seconds_passed >= self.data['throttle']: | |
|
|
153 | print 'passed', seconds_passed | |
|
|
154 | self.__plot() | |
|
|
155 | seconds_passed = 0 | |
|
|
142 | 156 | |
|
|
143 | 157 | except zmq.Again as e: |
|
|
144 | 158 | print 'Waiting for data...' |
|
|
145 |
plt.pause( |
|
|
|
159 | plt.pause(2) | |
|
|
160 | seconds_passed += 2 | |
|
|
146 | 161 | |
|
|
147 | 162 | def close(self): |
|
|
148 | 163 | if self.dataOut: |
|
|
149 | 164 | self.__plot() |
|
|
150 | 165 | |
|
|
151 | 166 | |
|
|
152 | 167 | class PlotSpectraData(PlotData): |
|
|
153 | 168 | |
|
|
154 | 169 | CODE = 'spc' |
|
|
155 | 170 | colormap = 'jro' |
|
|
156 | 171 | CONFLATE = False |
|
|
157 | 172 | |
|
|
158 | 173 | def setup(self): |
|
|
159 | 174 | |
|
|
160 | 175 | ncolspan = 1 |
|
|
161 | 176 | colspan = 1 |
|
|
162 | 177 | self.ncols = int(numpy.sqrt(self.dataOut.nChannels)+0.9) |
|
|
163 | 178 | self.nrows = int(self.dataOut.nChannels*1./self.ncols + 0.9) |
|
|
164 | 179 | self.width = 3.6*self.ncols |
|
|
165 | 180 | self.height = 3.2*self.nrows |
|
|
166 | 181 | if self.showprofile: |
|
|
167 | 182 | ncolspan = 3 |
|
|
168 | 183 | colspan = 2 |
|
|
169 | 184 | self.width += 1.2*self.ncols |
|
|
170 | 185 | |
|
|
171 | 186 | self.ylabel = 'Range [Km]' |
|
|
172 | 187 | self.titles = ['Channel {}'.format(x) for x in self.dataOut.channelList] |
|
|
173 | 188 | |
|
|
174 | 189 | if self.figure is None: |
|
|
175 | 190 | self.figure = plt.figure(figsize=(self.width, self.height), |
|
|
176 | 191 | edgecolor='k', |
|
|
177 | 192 | facecolor='w') |
|
|
178 | 193 | else: |
|
|
179 | 194 | self.figure.clf() |
|
|
180 | 195 | |
|
|
181 | 196 | n = 0 |
|
|
182 | 197 | for y in range(self.nrows): |
|
|
183 | 198 | for x in range(self.ncols): |
|
|
184 | 199 | if n >= self.dataOut.nChannels: |
|
|
185 | 200 | break |
|
|
186 | 201 | ax = plt.subplot2grid((self.nrows, self.ncols*ncolspan), (y, x*ncolspan), 1, colspan) |
|
|
187 | 202 | if self.showprofile: |
|
|
188 | 203 | ax.ax_profile = plt.subplot2grid((self.nrows, self.ncols*ncolspan), (y, x*ncolspan+colspan), 1, 1) |
|
|
189 | 204 | |
|
|
190 | 205 | ax.firsttime = True |
|
|
191 | 206 | self.axes.append(ax) |
|
|
192 | 207 | n += 1 |
|
|
193 | 208 | |
|
|
194 | 209 | def plot(self): |
|
|
195 | 210 | |
|
|
196 | 211 | if self.xaxis == "frequency": |
|
|
197 | 212 | x = self.dataOut.getFreqRange(1)/1000. |
|
|
198 | 213 | xlabel = "Frequency (kHz)" |
|
|
199 | 214 | elif self.xaxis == "time": |
|
|
200 | 215 | x = self.dataOut.getAcfRange(1) |
|
|
201 | 216 | xlabel = "Time (ms)" |
|
|
202 | 217 | else: |
|
|
203 | 218 | x = self.dataOut.getVelRange(1) |
|
|
204 | 219 | xlabel = "Velocity (m/s)" |
|
|
205 | 220 | |
|
|
206 | 221 | y = self.dataOut.getHeiRange() |
|
|
207 | 222 | z = self.data[self.CODE] |
|
|
208 | 223 | |
|
|
209 | 224 | for n, ax in enumerate(self.axes): |
|
|
210 | 225 | |
|
|
211 | 226 | if ax.firsttime: |
|
|
212 | 227 | self.xmax = self.xmax if self.xmax else np.nanmax(x) |
|
|
213 | 228 | self.xmin = self.xmin if self.xmin else -self.xmax |
|
|
214 | 229 | self.ymin = self.ymin if self.ymin else np.nanmin(y) |
|
|
215 | 230 | self.ymax = self.ymax if self.ymax else np.nanmax(y) |
|
|
216 | 231 | self.zmin = self.zmin if self.zmin else np.nanmin(z) |
|
|
217 | 232 | self.zmax = self.zmax if self.zmax else np.nanmax(z) |
|
|
218 | 233 | ax.plot = ax.pcolormesh(x, y, z[n].T, |
|
|
219 | 234 | vmin=self.zmin, |
|
|
220 | 235 | vmax=self.zmax, |
|
|
221 | 236 | cmap=plt.get_cmap(self.colormap) |
|
|
222 | 237 | ) |
|
|
223 | 238 | divider = make_axes_locatable(ax) |
|
|
224 | 239 | cax = divider.new_horizontal(size='3%', pad=0.05) |
|
|
225 | 240 | self.figure.add_axes(cax) |
|
|
226 | 241 | plt.colorbar(ax.plot, cax) |
|
|
227 | 242 | |
|
|
228 | 243 | ax.set_xlim(self.xmin, self.xmax) |
|
|
229 | 244 | ax.set_ylim(self.ymin, self.ymax) |
|
|
230 | 245 | |
|
|
231 | 246 | ax.set_ylabel(self.ylabel) |
|
|
232 | 247 | ax.set_xlabel(xlabel) |
|
|
233 | 248 | |
|
|
234 | 249 | ax.firsttime = False |
|
|
235 | 250 | |
|
|
236 | 251 | if self.showprofile: |
|
|
237 | 252 | ax.plot_profile= ax.ax_profile.plot(self.data['rti'][self.max_time][n], y)[0] |
|
|
238 | 253 | ax.ax_profile.set_xlim(self.zmin, self.zmax) |
|
|
239 | 254 | ax.ax_profile.set_ylim(self.ymin, self.ymax) |
|
|
240 | 255 | ax.ax_profile.set_xlabel('dB') |
|
|
241 | 256 | ax.ax_profile.grid(b=True, axis='x') |
|
|
242 | 257 | ax.plot_noise = ax.ax_profile.plot(numpy.repeat(self.data['noise'][self.max_time][n], len(y)), y, |
|
|
243 | 258 | color="k", linestyle="dashed", lw=2)[0] |
|
|
244 | 259 | [tick.set_visible(False) for tick in ax.ax_profile.get_yticklabels()] |
|
|
245 | 260 | else: |
|
|
246 | 261 | ax.plot.set_array(z[n].T.ravel()) |
|
|
247 | 262 | if self.showprofile: |
|
|
248 | 263 | ax.plot_profile.set_data(self.data['rti'][self.max_time][n], y) |
|
|
249 | 264 | ax.plot_noise.set_data(numpy.repeat(self.data['noise'][self.max_time][n], len(y)), y) |
|
|
250 | 265 | |
|
|
251 | 266 | ax.set_title('{} - Noise: {:.2f} dB'.format(self.titles[n], self.data['noise'][self.max_time][n]), |
|
|
252 | 267 | size=8) |
|
|
253 | 268 | self.saveTime = self.max_time |
|
|
254 | 269 | |
|
|
255 | 270 | |
|
|
256 | 271 | class PlotCrossSpectraData(PlotData): |
|
|
257 | 272 | |
|
|
258 | 273 | CODE = 'cspc' |
|
|
259 | 274 | zmin_coh = None |
|
|
260 | 275 | zmax_coh = None |
|
|
261 | 276 | zmin_phase = None |
|
|
262 | 277 | zmax_phase = None |
|
|
263 | 278 | CONFLATE = False |
|
|
264 | 279 | |
|
|
265 | 280 | def setup(self): |
|
|
266 | 281 | |
|
|
267 | 282 | ncolspan = 1 |
|
|
268 | 283 | colspan = 1 |
|
|
269 | 284 | self.ncols = 2 |
|
|
270 | 285 | self.nrows = self.dataOut.nPairs |
|
|
271 | 286 | self.width = 3.6*self.ncols |
|
|
272 | 287 | self.height = 3.2*self.nrows |
|
|
273 | 288 | |
|
|
274 | 289 | self.ylabel = 'Range [Km]' |
|
|
275 | 290 | self.titles = ['Channel {}'.format(x) for x in self.dataOut.channelList] |
|
|
276 | 291 | |
|
|
277 | 292 | if self.figure is None: |
|
|
278 | 293 | self.figure = plt.figure(figsize=(self.width, self.height), |
|
|
279 | 294 | edgecolor='k', |
|
|
280 | 295 | facecolor='w') |
|
|
281 | 296 | else: |
|
|
282 | 297 | self.figure.clf() |
|
|
283 | 298 | |
|
|
284 | 299 | for y in range(self.nrows): |
|
|
285 | 300 | for x in range(self.ncols): |
|
|
286 | 301 | ax = plt.subplot2grid((self.nrows, self.ncols), (y, x), 1, 1) |
|
|
287 | 302 | ax.firsttime = True |
|
|
288 | 303 | self.axes.append(ax) |
|
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289 | 304 | |
|
|
290 | 305 | def plot(self): |
|
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291 | 306 | |
|
|
292 | 307 | if self.xaxis == "frequency": |
|
|
293 | 308 | x = self.dataOut.getFreqRange(1)/1000. |
|
|
294 | 309 | xlabel = "Frequency (kHz)" |
|
|
295 | 310 | elif self.xaxis == "time": |
|
|
296 | 311 | x = self.dataOut.getAcfRange(1) |
|
|
297 | 312 | xlabel = "Time (ms)" |
|
|
298 | 313 | else: |
|
|
299 | 314 | x = self.dataOut.getVelRange(1) |
|
|
300 | 315 | xlabel = "Velocity (m/s)" |
|
|
301 | 316 | |
|
|
302 | 317 | y = self.dataOut.getHeiRange() |
|
|
303 | 318 | z_coh = self.data['cspc_coh'] |
|
|
304 | 319 | z_phase = self.data['cspc_phase'] |
|
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305 | 320 | |
|
|
306 | 321 | for n in range(self.nrows): |
|
|
307 | 322 | ax = self.axes[2*n] |
|
|
308 | 323 | ax1 = self.axes[2*n+1] |
|
|
309 | 324 | if ax.firsttime: |
|
|
310 | 325 | self.xmax = self.xmax if self.xmax else np.nanmax(x) |
|
|
311 | 326 | self.xmin = self.xmin if self.xmin else -self.xmax |
|
|
312 | 327 | self.ymin = self.ymin if self.ymin else np.nanmin(y) |
|
|
313 | 328 | self.ymax = self.ymax if self.ymax else np.nanmax(y) |
|
|
314 | 329 | self.zmin_coh = self.zmin_coh if self.zmin_coh else 0.0 |
|
|
315 | 330 | self.zmax_coh = self.zmax_coh if self.zmax_coh else 1.0 |
|
|
316 | 331 | self.zmin_phase = self.zmin_phase if self.zmin_phase else -180 |
|
|
317 | 332 | self.zmax_phase = self.zmax_phase if self.zmax_phase else 180 |
|
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318 | 333 | |
|
|
319 | 334 | ax.plot = ax.pcolormesh(x, y, z_coh[n].T, |
|
|
320 | 335 | vmin=self.zmin_coh, |
|
|
321 | 336 | vmax=self.zmax_coh, |
|
|
322 | 337 | cmap=plt.get_cmap(self.colormap_coh) |
|
|
323 | 338 | ) |
|
|
324 | 339 | divider = make_axes_locatable(ax) |
|
|
325 | 340 | cax = divider.new_horizontal(size='3%', pad=0.05) |
|
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326 | 341 | self.figure.add_axes(cax) |
|
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327 | 342 | plt.colorbar(ax.plot, cax) |
|
|
328 | 343 | |
|
|
329 | 344 | ax.set_xlim(self.xmin, self.xmax) |
|
|
330 | 345 | ax.set_ylim(self.ymin, self.ymax) |
|
|
331 | 346 | |
|
|
332 | 347 | ax.set_ylabel(self.ylabel) |
|
|
333 | 348 | ax.set_xlabel(xlabel) |
|
|
334 | 349 | ax.firsttime = False |
|
|
335 | 350 | |
|
|
336 | 351 | ax1.plot = ax1.pcolormesh(x, y, z_phase[n].T, |
|
|
337 | 352 | vmin=self.zmin_phase, |
|
|
338 | 353 | vmax=self.zmax_phase, |
|
|
339 | 354 | cmap=plt.get_cmap(self.colormap_phase) |
|
|
340 | 355 | ) |
|
|
341 | 356 | divider = make_axes_locatable(ax1) |
|
|
342 | 357 | cax = divider.new_horizontal(size='3%', pad=0.05) |
|
|
343 | 358 | self.figure.add_axes(cax) |
|
|
344 | 359 | plt.colorbar(ax1.plot, cax) |
|
|
345 | 360 | |
|
|
346 | 361 | ax1.set_xlim(self.xmin, self.xmax) |
|
|
347 | 362 | ax1.set_ylim(self.ymin, self.ymax) |
|
|
348 | 363 | |
|
|
349 | 364 | ax1.set_ylabel(self.ylabel) |
|
|
350 | 365 | ax1.set_xlabel(xlabel) |
|
|
351 | 366 | ax1.firsttime = False |
|
|
352 | 367 | else: |
|
|
353 | 368 | ax.plot.set_array(z_coh[n].T.ravel()) |
|
|
354 | 369 | ax1.plot.set_array(z_phase[n].T.ravel()) |
|
|
355 | 370 | |
|
|
356 | 371 | ax.set_title('Coherence Ch{} * Ch{}'.format(self.dataOut.pairsList[n][0], self.dataOut.pairsList[n][1]), size=8) |
|
|
357 | 372 | ax1.set_title('Phase Ch{} * Ch{}'.format(self.dataOut.pairsList[n][0], self.dataOut.pairsList[n][1]), size=8) |
|
|
358 | 373 | self.saveTime = self.max_time |
|
|
359 | 374 | |
|
|
360 | 375 | |
|
|
361 | 376 | class PlotSpectraMeanData(PlotSpectraData): |
|
|
362 | 377 | |
|
|
363 | 378 | CODE = 'spc_mean' |
|
|
364 | 379 | colormap = 'jet' |
|
|
365 | 380 | |
|
|
366 | 381 | def plot(self): |
|
|
367 | 382 | |
|
|
368 | 383 | if self.xaxis == "frequency": |
|
|
369 | 384 | x = self.dataOut.getFreqRange(1)/1000. |
|
|
370 | 385 | xlabel = "Frequency (kHz)" |
|
|
371 | 386 | elif self.xaxis == "time": |
|
|
372 | 387 | x = self.dataOut.getAcfRange(1) |
|
|
373 | 388 | xlabel = "Time (ms)" |
|
|
374 | 389 | else: |
|
|
375 | 390 | x = self.dataOut.getVelRange(1) |
|
|
376 | 391 | xlabel = "Velocity (m/s)" |
|
|
377 | 392 | |
|
|
378 | 393 | y = self.dataOut.getHeiRange() |
|
|
379 | 394 | z = self.data['spc'] |
|
|
380 | 395 | mean = self.data['mean'][self.max_time] |
|
|
381 | 396 | |
|
|
382 | 397 | for n, ax in enumerate(self.axes): |
|
|
383 | 398 | |
|
|
384 | 399 | if ax.firsttime: |
|
|
385 | 400 | self.xmax = self.xmax if self.xmax else np.nanmax(x) |
|
|
386 | 401 | self.xmin = self.xmin if self.xmin else -self.xmax |
|
|
387 | 402 | self.ymin = self.ymin if self.ymin else np.nanmin(y) |
|
|
388 | 403 | self.ymax = self.ymax if self.ymax else np.nanmax(y) |
|
|
389 | 404 | self.zmin = self.zmin if self.zmin else np.nanmin(z) |
|
|
390 | 405 | self.zmax = self.zmax if self.zmax else np.nanmax(z) |
|
|
391 | 406 | ax.plt = ax.pcolormesh(x, y, z[n].T, |
|
|
392 | 407 | vmin=self.zmin, |
|
|
393 | 408 | vmax=self.zmax, |
|
|
394 | 409 | cmap=plt.get_cmap(self.colormap) |
|
|
395 | 410 | ) |
|
|
396 | 411 | ax.plt_dop = ax.plot(mean[n], y, |
|
|
397 | 412 | color='k')[0] |
|
|
398 | 413 | |
|
|
399 | 414 | divider = make_axes_locatable(ax) |
|
|
400 | 415 | cax = divider.new_horizontal(size='3%', pad=0.05) |
|
|
401 | 416 | self.figure.add_axes(cax) |
|
|
402 | 417 | plt.colorbar(ax.plt, cax) |
|
|
403 | 418 | |
|
|
404 | 419 | ax.set_xlim(self.xmin, self.xmax) |
|
|
405 | 420 | ax.set_ylim(self.ymin, self.ymax) |
|
|
406 | 421 | |
|
|
407 | 422 | ax.set_ylabel(self.ylabel) |
|
|
408 | 423 | ax.set_xlabel(xlabel) |
|
|
409 | 424 | |
|
|
410 | 425 | ax.firsttime = False |
|
|
411 | 426 | |
|
|
412 | 427 | if self.showprofile: |
|
|
413 | 428 | ax.plt_profile= ax.ax_profile.plot(self.data['rti'][self.max_time][n], y)[0] |
|
|
414 | 429 | ax.ax_profile.set_xlim(self.zmin, self.zmax) |
|
|
415 | 430 | ax.ax_profile.set_ylim(self.ymin, self.ymax) |
|
|
416 | 431 | ax.ax_profile.set_xlabel('dB') |
|
|
417 | 432 | ax.ax_profile.grid(b=True, axis='x') |
|
|
418 | 433 | ax.plt_noise = ax.ax_profile.plot(numpy.repeat(self.data['noise'][self.max_time][n], len(y)), y, |
|
|
419 | 434 | color="k", linestyle="dashed", lw=2)[0] |
|
|
420 | 435 | [tick.set_visible(False) for tick in ax.ax_profile.get_yticklabels()] |
|
|
421 | 436 | else: |
|
|
422 | 437 | ax.plt.set_array(z[n].T.ravel()) |
|
|
423 | 438 | ax.plt_dop.set_data(mean[n], y) |
|
|
424 | 439 | if self.showprofile: |
|
|
425 | 440 | ax.plt_profile.set_data(self.data['rti'][self.max_time][n], y) |
|
|
426 | 441 | ax.plt_noise.set_data(numpy.repeat(self.data['noise'][self.max_time][n], len(y)), y) |
|
|
427 | 442 | |
|
|
428 | 443 | ax.set_title('{} - Noise: {:.2f} dB'.format(self.titles[n], self.data['noise'][self.max_time][n]), |
|
|
429 | 444 | size=8) |
|
|
430 | 445 | self.saveTime = self.max_time |
|
|
431 | 446 | |
|
|
432 | 447 | |
|
|
433 | 448 | class PlotRTIData(PlotData): |
|
|
434 | 449 | |
|
|
435 | 450 | CODE = 'rti' |
|
|
436 | 451 | colormap = 'jro' |
|
|
437 | 452 | |
|
|
438 | 453 | def setup(self): |
|
|
439 | 454 | self.ncols = 1 |
|
|
440 | 455 | self.nrows = self.dataOut.nChannels |
|
|
441 | 456 | self.width = 10 |
|
|
442 | 457 | self.height = 2.2*self.nrows if self.nrows<6 else 12 |
|
|
443 | 458 | if self.nrows==1: |
|
|
444 | 459 | self.height += 1 |
|
|
445 | 460 | self.ylabel = 'Range [Km]' |
|
|
446 | 461 | self.titles = ['Channel {}'.format(x) for x in self.dataOut.channelList] |
|
|
447 | 462 | |
|
|
448 | 463 | if self.figure is None: |
|
|
449 | 464 | self.figure = plt.figure(figsize=(self.width, self.height), |
|
|
450 | 465 | edgecolor='k', |
|
|
451 | 466 | facecolor='w') |
|
|
452 | 467 | else: |
|
|
453 | 468 | self.figure.clf() |
|
|
454 | 469 | self.axes = [] |
|
|
455 | 470 | |
|
|
456 | 471 | for n in range(self.nrows): |
|
|
457 | 472 | ax = self.figure.add_subplot(self.nrows, self.ncols, n+1) |
|
|
458 | 473 | ax.firsttime = True |
|
|
459 | 474 | self.axes.append(ax) |
|
|
460 | 475 | |
|
|
461 | 476 | def plot(self): |
|
|
462 | 477 | |
|
|
463 | 478 | self.x = np.array(self.times) |
|
|
464 | 479 | self.y = self.dataOut.getHeiRange() |
|
|
465 | 480 | self.z = [] |
|
|
466 | 481 | |
|
|
467 | 482 | for ch in range(self.nrows): |
|
|
468 | 483 | self.z.append([self.data[self.CODE][t][ch] for t in self.times]) |
|
|
469 | 484 | |
|
|
470 | 485 | self.z = np.array(self.z) |
|
|
471 | 486 | for n, ax in enumerate(self.axes): |
|
|
472 | ||
|
|
473 | 487 | x, y, z = self.fill_gaps(*self.decimate()) |
|
|
474 | 488 | xmin = self.min_time |
|
|
475 | 489 | xmax = xmin+self.xrange*60*60 |
|
|
490 | self.zmin = self.zmin if self.zmin else np.min(self.z) | |
|
|
491 | self.zmax = self.zmax if self.zmax else np.max(self.z) | |
|
|
476 | 492 | if ax.firsttime: |
|
|
477 | 493 | self.ymin = self.ymin if self.ymin else np.nanmin(self.y) |
|
|
478 | 494 | self.ymax = self.ymax if self.ymax else np.nanmax(self.y) |
|
|
479 | self.zmin = self.zmin if self.zmin else np.nanmin(self.z) | |
|
|
480 | self.zmax = self.zmax if self.zmax else np.nanmax(self.z) | |
|
|
481 | 495 | plot = ax.pcolormesh(x, y, z[n].T, |
|
|
482 | 496 | vmin=self.zmin, |
|
|
483 | 497 | vmax=self.zmax, |
|
|
484 | 498 | cmap=plt.get_cmap(self.colormap) |
|
|
485 | 499 | ) |
|
|
486 | 500 | divider = make_axes_locatable(ax) |
|
|
487 | 501 | cax = divider.new_horizontal(size='2%', pad=0.05) |
|
|
488 | 502 | self.figure.add_axes(cax) |
|
|
489 | 503 | plt.colorbar(plot, cax) |
|
|
490 | 504 | ax.set_ylim(self.ymin, self.ymax) |
|
|
491 | 505 | |
|
|
492 | 506 | ax.xaxis.set_major_formatter(FuncFormatter(func)) |
|
|
493 | 507 | ax.xaxis.set_major_locator(LinearLocator(6)) |
|
|
494 | 508 | |
|
|
495 | 509 | ax.set_ylabel(self.ylabel) |
|
|
496 | 510 | |
|
|
497 | 511 | # if self.xmin is None: |
|
|
498 | 512 | # xmin = self.min_time |
|
|
499 | 513 | # else: |
|
|
500 | 514 | # xmin = (datetime.datetime.combine(self.dataOut.datatime.date(), |
|
|
501 | 515 | # datetime.time(self.xmin, 0, 0))-d1970).total_seconds() |
|
|
502 | 516 | |
|
|
503 | 517 | ax.set_xlim(xmin, xmax) |
|
|
504 | 518 | ax.firsttime = False |
|
|
505 | 519 | else: |
|
|
506 | 520 | ax.collections.remove(ax.collections[0]) |
|
|
507 | 521 | ax.set_xlim(xmin, xmax) |
|
|
508 | 522 | plot = ax.pcolormesh(x, y, z[n].T, |
|
|
509 | 523 | vmin=self.zmin, |
|
|
510 | 524 | vmax=self.zmax, |
|
|
511 | 525 | cmap=plt.get_cmap(self.colormap) |
|
|
512 | 526 | ) |
|
|
513 | 527 | ax.set_title('{} {}'.format(self.titles[n], |
|
|
514 | 528 | datetime.datetime.fromtimestamp(self.max_time).strftime('%y/%m/%d %H:%M:%S')), |
|
|
515 | 529 | size=8) |
|
|
516 | 530 | |
|
|
517 | 531 | self.saveTime = self.min_time |
|
|
518 | 532 | |
|
|
519 | 533 | |
|
|
520 | 534 | class PlotCOHData(PlotRTIData): |
|
|
521 | 535 | |
|
|
522 | 536 | CODE = 'coh' |
|
|
523 | 537 | |
|
|
524 | 538 | def setup(self): |
|
|
525 | 539 | |
|
|
526 | 540 | self.ncols = 1 |
|
|
527 | 541 | self.nrows = self.dataOut.nPairs |
|
|
528 | 542 | self.width = 10 |
|
|
529 | 543 | self.height = 2.2*self.nrows if self.nrows<6 else 12 |
|
|
530 | 544 | if self.nrows==1: |
|
|
531 | 545 | self.height += 1 |
|
|
532 | 546 | self.ylabel = 'Range [Km]' |
|
|
533 | 547 | self.titles = ['{} Ch{} * Ch{}'.format(self.CODE.upper(), x[0], x[1]) for x in self.dataOut.pairsList] |
|
|
534 | 548 | |
|
|
535 | 549 | if self.figure is None: |
|
|
536 | 550 | self.figure = plt.figure(figsize=(self.width, self.height), |
|
|
537 | 551 | edgecolor='k', |
|
|
538 | 552 | facecolor='w') |
|
|
539 | 553 | else: |
|
|
540 | 554 | self.figure.clf() |
|
|
541 | 555 | self.axes = [] |
|
|
542 | 556 | |
|
|
543 | 557 | for n in range(self.nrows): |
|
|
544 | 558 | ax = self.figure.add_subplot(self.nrows, self.ncols, n+1) |
|
|
545 | 559 | ax.firsttime = True |
|
|
546 | 560 | self.axes.append(ax) |
|
|
547 | 561 | |
|
|
548 | 562 | |
|
|
549 | 563 | class PlotNoiseData(PlotData): |
|
|
550 | 564 | CODE = 'noise' |
|
|
551 | 565 | |
|
|
552 | 566 | def setup(self): |
|
|
553 | 567 | |
|
|
554 | 568 | self.ncols = 1 |
|
|
555 | 569 | self.nrows = 1 |
|
|
556 | 570 | self.width = 10 |
|
|
557 | 571 | self.height = 3.2 |
|
|
558 | 572 | self.ylabel = 'Intensity [dB]' |
|
|
559 | 573 | self.titles = ['Noise'] |
|
|
560 | 574 | |
|
|
561 | 575 | if self.figure is None: |
|
|
562 | 576 | self.figure = plt.figure(figsize=(self.width, self.height), |
|
|
563 | 577 | edgecolor='k', |
|
|
564 | 578 | facecolor='w') |
|
|
565 | 579 | else: |
|
|
566 | 580 | self.figure.clf() |
|
|
567 | 581 | self.axes = [] |
|
|
568 | 582 | |
|
|
569 | 583 | self.ax = self.figure.add_subplot(self.nrows, self.ncols, 1) |
|
|
570 | 584 | self.ax.firsttime = True |
|
|
571 | 585 | |
|
|
572 | 586 | def plot(self): |
|
|
573 | 587 | |
|
|
574 | 588 | x = self.times |
|
|
575 | 589 | xmin = self.min_time |
|
|
576 | 590 | xmax = xmin+self.xrange*60*60 |
|
|
577 | 591 | if self.ax.firsttime: |
|
|
578 | 592 | for ch in self.dataOut.channelList: |
|
|
579 | 593 | y = [self.data[self.CODE][t][ch] for t in self.times] |
|
|
580 | 594 | self.ax.plot(x, y, lw=1, label='Ch{}'.format(ch)) |
|
|
581 | 595 | self.ax.firsttime = False |
|
|
582 | 596 | self.ax.xaxis.set_major_formatter(FuncFormatter(func)) |
|
|
583 | 597 | self.ax.xaxis.set_major_locator(LinearLocator(6)) |
|
|
584 | 598 | self.ax.set_ylabel(self.ylabel) |
|
|
585 | 599 | plt.legend() |
|
|
586 | 600 | else: |
|
|
587 | 601 | for ch in self.dataOut.channelList: |
|
|
588 | 602 | y = [self.data[self.CODE][t][ch] for t in self.times] |
|
|
589 | 603 | self.ax.lines[ch].set_data(x, y) |
|
|
590 | 604 | |
|
|
591 | 605 | self.ax.set_xlim(xmin, xmax) |
|
|
592 | 606 | self.ax.set_ylim(min(y)-5, max(y)+5) |
|
|
593 | 607 | self.saveTime = self.min_time |
|
|
594 | 608 | |
|
|
595 | 609 | |
|
|
596 | 610 | class PlotWindProfilerData(PlotRTIData): |
|
|
597 | 611 | CODE = 'wind' |
|
|
598 | 612 | colormap = 'seismic' |
|
|
599 | 613 | |
|
|
600 | 614 | def setup(self): |
|
|
601 | 615 | self.ncols = 1 |
|
|
602 | 616 | self.nrows = self.dataOut.data_output.shape[0] |
|
|
603 | 617 | self.width = 10 |
|
|
604 | 618 | self.height = 2.2*self.nrows |
|
|
605 | 619 | self.ylabel = 'Height [Km]' |
|
|
606 | 620 | self.titles = ['Zonal' ,'Meridional', 'Vertical'] |
|
|
607 | 621 | self.clabels = ['Velocity (m/s)','Velocity (m/s)','Velocity (cm/s)'] |
|
|
608 | 622 | self.windFactor = [1, 1, 100] |
|
|
609 | 623 | |
|
|
610 | 624 | if self.figure is None: |
|
|
611 | 625 | self.figure = plt.figure(figsize=(self.width, self.height), |
|
|
612 | 626 | edgecolor='k', |
|
|
613 | 627 | facecolor='w') |
|
|
614 | 628 | else: |
|
|
615 | 629 | self.figure.clf() |
|
|
616 | 630 | self.axes = [] |
|
|
617 | 631 | |
|
|
618 | 632 | for n in range(self.nrows): |
|
|
619 | 633 | ax = self.figure.add_subplot(self.nrows, self.ncols, n+1) |
|
|
620 | 634 | ax.firsttime = True |
|
|
621 | 635 | self.axes.append(ax) |
|
|
622 | 636 | |
|
|
623 | 637 | def plot(self): |
|
|
624 | 638 | |
|
|
625 | 639 | self.x = np.array(self.times) |
|
|
626 | 640 | self.y = self.dataOut.heightList |
|
|
627 | 641 | self.z = [] |
|
|
628 | 642 | |
|
|
629 | 643 | for ch in range(self.nrows): |
|
|
630 | 644 | self.z.append([self.data[self.CODE][t][ch] for t in self.times]) |
|
|
631 | 645 | |
|
|
632 | 646 | self.z = np.array(self.z) |
|
|
633 | 647 | self.z = numpy.ma.masked_invalid(self.z) |
|
|
634 | 648 | |
|
|
635 | 649 | cmap=plt.get_cmap(self.colormap) |
|
|
636 | 650 | cmap.set_bad('white', 1.) |
|
|
637 | 651 | |
|
|
638 | 652 | for n, ax in enumerate(self.axes): |
|
|
639 | 653 | x, y, z = self.fill_gaps(*self.decimate()) |
|
|
640 | 654 | xmin = self.min_time |
|
|
641 | 655 | xmax = xmin+self.xrange*60*60 |
|
|
642 | 656 | if ax.firsttime: |
|
|
643 | 657 | self.ymin = self.ymin if self.ymin else np.nanmin(self.y) |
|
|
644 | 658 | self.ymax = self.ymax if self.ymax else np.nanmax(self.y) |
|
|
645 | 659 | self.zmax = self.zmax if self.zmax else numpy.nanmax(abs(self.z[:-1, :])) |
|
|
646 | 660 | self.zmin = self.zmin if self.zmin else -self.zmax |
|
|
647 | 661 | |
|
|
648 | 662 | plot = ax.pcolormesh(x, y, z[n].T*self.windFactor[n], |
|
|
649 | 663 | vmin=self.zmin, |
|
|
650 | 664 | vmax=self.zmax, |
|
|
651 | 665 | cmap=cmap |
|
|
652 | 666 | ) |
|
|
653 | 667 | divider = make_axes_locatable(ax) |
|
|
654 | 668 | cax = divider.new_horizontal(size='2%', pad=0.05) |
|
|
655 | 669 | cax.set_ylabel(self.clabels[n]) |
|
|
656 | 670 | self.figure.add_axes(cax) |
|
|
657 | 671 | plt.colorbar(plot, cax) |
|
|
658 | 672 | ax.set_ylim(self.ymin, self.ymax) |
|
|
659 | 673 | |
|
|
660 | 674 | ax.xaxis.set_major_formatter(FuncFormatter(func)) |
|
|
661 | 675 | ax.xaxis.set_major_locator(LinearLocator(6)) |
|
|
662 | 676 | |
|
|
663 | 677 | ax.set_ylabel(self.ylabel) |
|
|
664 | 678 | |
|
|
665 | 679 | ax.set_xlim(xmin, xmax) |
|
|
666 | 680 | ax.firsttime = False |
|
|
667 | 681 | else: |
|
|
668 | 682 | ax.collections.remove(ax.collections[0]) |
|
|
669 | 683 | ax.set_xlim(xmin, xmax) |
|
|
670 | 684 | plot = ax.pcolormesh(x, y, z[n].T*self.windFactor[n], |
|
|
671 | 685 | vmin=self.zmin, |
|
|
672 | 686 | vmax=self.zmax, |
|
|
673 | 687 | cmap=plt.get_cmap(self.colormap) |
|
|
674 | 688 | ) |
|
|
675 | 689 | ax.set_title('{} {}'.format(self.titles[n], |
|
|
676 | 690 | datetime.datetime.fromtimestamp(self.max_time).strftime('%y/%m/%d %H:%M:%S')), |
|
|
677 | 691 | size=8) |
|
|
678 | 692 | |
|
|
679 | 693 | self.saveTime = self.min_time |
|
|
680 | 694 | |
|
|
681 | 695 | |
|
|
682 | 696 | class PlotSNRData(PlotRTIData): |
|
|
683 | 697 | CODE = 'snr' |
|
|
684 | 698 | colormap = 'jet' |
|
|
685 | 699 | |
|
|
686 | 700 | class PlotDOPData(PlotRTIData): |
|
|
687 | 701 | CODE = 'dop' |
|
|
688 | 702 | colormap = 'jet' |
|
|
689 | 703 | |
|
|
690 | 704 | |
|
|
691 | 705 | class PlotPHASEData(PlotCOHData): |
|
|
692 | 706 | CODE = 'phase' |
|
|
693 | 707 | colormap = 'seismic' |
| @@ -1,1743 +1,1750 | |||
|
|
1 | 1 | ''' |
|
|
2 | 2 | Created on Jul 2, 2014 |
|
|
3 | 3 | |
|
|
4 | 4 | @author: roj-idl71 |
|
|
5 | 5 | ''' |
|
|
6 | 6 | import os |
|
|
7 | 7 | import sys |
|
|
8 | 8 | import glob |
|
|
9 | 9 | import time |
|
|
10 | 10 | import numpy |
|
|
11 | 11 | import fnmatch |
|
|
12 | 12 | import time, datetime |
|
|
13 | 13 | #import h5py |
|
|
14 | 14 | import traceback |
|
|
15 | 15 | |
|
|
16 | 16 | try: |
|
|
17 | 17 | from gevent import sleep |
|
|
18 | 18 | except: |
|
|
19 | 19 | from time import sleep |
|
|
20 | 20 | |
|
|
21 | 21 | from schainpy.model.data.jroheaderIO import PROCFLAG, BasicHeader, SystemHeader, RadarControllerHeader, ProcessingHeader |
|
|
22 | 22 | from schainpy.model.data.jroheaderIO import get_dtype_index, get_numpy_dtype, get_procflag_dtype, get_dtype_width |
|
|
23 | 23 | |
|
|
24 | 24 | LOCALTIME = True |
|
|
25 | 25 | |
|
|
26 | 26 | def isNumber(cad): |
|
|
27 | 27 | """ |
|
|
28 | 28 | Chequea si el conjunto de caracteres que componen un string puede ser convertidos a un numero. |
|
|
29 | 29 | |
|
|
30 | 30 | Excepciones: |
|
|
31 | 31 | Si un determinado string no puede ser convertido a numero |
|
|
32 | 32 | Input: |
|
|
33 | 33 | str, string al cual se le analiza para determinar si convertible a un numero o no |
|
|
34 | 34 | |
|
|
35 | 35 | Return: |
|
|
36 | 36 | True : si el string es uno numerico |
|
|
37 | 37 | False : no es un string numerico |
|
|
38 | 38 | """ |
|
|
39 | 39 | try: |
|
|
40 | 40 | float( cad ) |
|
|
41 | 41 | return True |
|
|
42 | 42 | except: |
|
|
43 | 43 | return False |
|
|
44 | 44 | |
|
|
45 | 45 | def isFileInEpoch(filename, startUTSeconds, endUTSeconds): |
|
|
46 | 46 | """ |
|
|
47 | 47 | Esta funcion determina si un archivo de datos se encuentra o no dentro del rango de fecha especificado. |
|
|
48 | 48 | |
|
|
49 | 49 | Inputs: |
|
|
50 | 50 | filename : nombre completo del archivo de datos en formato Jicamarca (.r) |
|
|
51 | 51 | |
|
|
52 | 52 | startUTSeconds : fecha inicial del rango seleccionado. La fecha esta dada en |
|
|
53 | 53 | segundos contados desde 01/01/1970. |
|
|
54 | 54 | endUTSeconds : fecha final del rango seleccionado. La fecha esta dada en |
|
|
55 | 55 | segundos contados desde 01/01/1970. |
|
|
56 | 56 | |
|
|
57 | 57 | Return: |
|
|
58 | 58 | Boolean : Retorna True si el archivo de datos contiene datos en el rango de |
|
|
59 | 59 | fecha especificado, de lo contrario retorna False. |
|
|
60 | 60 | |
|
|
61 | 61 | Excepciones: |
|
|
62 | 62 | Si el archivo no existe o no puede ser abierto |
|
|
63 | 63 | Si la cabecera no puede ser leida. |
|
|
64 | 64 | |
|
|
65 | 65 | """ |
|
|
66 | 66 | basicHeaderObj = BasicHeader(LOCALTIME) |
|
|
67 | 67 | |
|
|
68 | 68 | try: |
|
|
69 | 69 | fp = open(filename,'rb') |
|
|
70 | 70 | except IOError: |
|
|
71 | 71 | print "The file %s can't be opened" %(filename) |
|
|
72 | 72 | return 0 |
|
|
73 | 73 | |
|
|
74 | 74 | sts = basicHeaderObj.read(fp) |
|
|
75 | 75 | fp.close() |
|
|
76 | 76 | |
|
|
77 | 77 | if not(sts): |
|
|
78 | 78 | print "Skipping the file %s because it has not a valid header" %(filename) |
|
|
79 | 79 | return 0 |
|
|
80 | 80 | |
|
|
81 | 81 | if not ((startUTSeconds <= basicHeaderObj.utc) and (endUTSeconds > basicHeaderObj.utc)): |
|
|
82 | 82 | return 0 |
|
|
83 | 83 | |
|
|
84 | 84 | return 1 |
|
|
85 | 85 | |
|
|
86 | 86 | def isTimeInRange(thisTime, startTime, endTime): |
|
|
87 | 87 | |
|
|
88 | 88 | if endTime >= startTime: |
|
|
89 | 89 | if (thisTime < startTime) or (thisTime > endTime): |
|
|
90 | 90 | return 0 |
|
|
91 | 91 | |
|
|
92 | 92 | return 1 |
|
|
93 | 93 | else: |
|
|
94 | 94 | if (thisTime < startTime) and (thisTime > endTime): |
|
|
95 | 95 | return 0 |
|
|
96 | 96 | |
|
|
97 | 97 | return 1 |
|
|
98 | 98 | |
|
|
99 | 99 | def isFileInTimeRange(filename, startDate, endDate, startTime, endTime): |
|
|
100 | 100 | """ |
|
|
101 | 101 | Retorna 1 si el archivo de datos se encuentra dentro del rango de horas especificado. |
|
|
102 | 102 | |
|
|
103 | 103 | Inputs: |
|
|
104 | 104 | filename : nombre completo del archivo de datos en formato Jicamarca (.r) |
|
|
105 | 105 | |
|
|
106 | 106 | startDate : fecha inicial del rango seleccionado en formato datetime.date |
|
|
107 | 107 | |
|
|
108 | 108 | endDate : fecha final del rango seleccionado en formato datetime.date |
|
|
109 | 109 | |
|
|
110 | 110 | startTime : tiempo inicial del rango seleccionado en formato datetime.time |
|
|
111 | 111 | |
|
|
112 | 112 | endTime : tiempo final del rango seleccionado en formato datetime.time |
|
|
113 | 113 | |
|
|
114 | 114 | Return: |
|
|
115 | 115 | Boolean : Retorna True si el archivo de datos contiene datos en el rango de |
|
|
116 | 116 | fecha especificado, de lo contrario retorna False. |
|
|
117 | 117 | |
|
|
118 | 118 | Excepciones: |
|
|
119 | 119 | Si el archivo no existe o no puede ser abierto |
|
|
120 | 120 | Si la cabecera no puede ser leida. |
|
|
121 | 121 | |
|
|
122 | 122 | """ |
|
|
123 | 123 | |
|
|
124 | 124 | |
|
|
125 | 125 | try: |
|
|
126 | 126 | fp = open(filename,'rb') |
|
|
127 | 127 | except IOError: |
|
|
128 | 128 | print "The file %s can't be opened" %(filename) |
|
|
129 | 129 | return None |
|
|
130 | 130 | |
|
|
131 | 131 | firstBasicHeaderObj = BasicHeader(LOCALTIME) |
|
|
132 | 132 | systemHeaderObj = SystemHeader() |
|
|
133 | 133 | radarControllerHeaderObj = RadarControllerHeader() |
|
|
134 | 134 | processingHeaderObj = ProcessingHeader() |
|
|
135 | 135 | |
|
|
136 | 136 | lastBasicHeaderObj = BasicHeader(LOCALTIME) |
|
|
137 | 137 | |
|
|
138 | 138 | sts = firstBasicHeaderObj.read(fp) |
|
|
139 | 139 | |
|
|
140 | 140 | if not(sts): |
|
|
141 | 141 | print "[Reading] Skipping the file %s because it has not a valid header" %(filename) |
|
|
142 | 142 | return None |
|
|
143 | 143 | |
|
|
144 | 144 | if not systemHeaderObj.read(fp): |
|
|
145 | 145 | return None |
|
|
146 | 146 | |
|
|
147 | 147 | if not radarControllerHeaderObj.read(fp): |
|
|
148 | 148 | return None |
|
|
149 | 149 | |
|
|
150 | 150 | if not processingHeaderObj.read(fp): |
|
|
151 | 151 | return None |
|
|
152 | 152 | |
|
|
153 | 153 | filesize = os.path.getsize(filename) |
|
|
154 | 154 | |
|
|
155 | 155 | offset = processingHeaderObj.blockSize + 24 #header size |
|
|
156 | 156 | |
|
|
157 | 157 | if filesize <= offset: |
|
|
158 | 158 | print "[Reading] %s: This file has not enough data" %filename |
|
|
159 | 159 | return None |
|
|
160 | 160 | |
|
|
161 | 161 | fp.seek(-offset, 2) |
|
|
162 | 162 | |
|
|
163 | 163 | sts = lastBasicHeaderObj.read(fp) |
|
|
164 | 164 | |
|
|
165 | 165 | fp.close() |
|
|
166 | 166 | |
|
|
167 | 167 | thisDatetime = lastBasicHeaderObj.datatime |
|
|
168 | 168 | thisTime_last_block = thisDatetime.time() |
|
|
169 | 169 | |
|
|
170 | 170 | thisDatetime = firstBasicHeaderObj.datatime |
|
|
171 | 171 | thisDate = thisDatetime.date() |
|
|
172 | 172 | thisTime_first_block = thisDatetime.time() |
|
|
173 | 173 | |
|
|
174 | 174 | #General case |
|
|
175 | 175 | # o>>>>>>>>>>>>>><<<<<<<<<<<<<<o |
|
|
176 | 176 | #-----------o----------------------------o----------- |
|
|
177 | 177 | # startTime endTime |
|
|
178 | 178 | |
|
|
179 | 179 | if endTime >= startTime: |
|
|
180 | 180 | if (thisTime_last_block < startTime) or (thisTime_first_block > endTime): |
|
|
181 | 181 | return None |
|
|
182 | 182 | |
|
|
183 | 183 | return thisDatetime |
|
|
184 | 184 | |
|
|
185 | 185 | #If endTime < startTime then endTime belongs to the next day |
|
|
186 | 186 | |
|
|
187 | 187 | |
|
|
188 | 188 | #<<<<<<<<<<<o o>>>>>>>>>>> |
|
|
189 | 189 | #-----------o----------------------------o----------- |
|
|
190 | 190 | # endTime startTime |
|
|
191 | 191 | |
|
|
192 | 192 | if (thisDate == startDate) and (thisTime_last_block < startTime): |
|
|
193 | 193 | return None |
|
|
194 | 194 | |
|
|
195 | 195 | if (thisDate == endDate) and (thisTime_first_block > endTime): |
|
|
196 | 196 | return None |
|
|
197 | 197 | |
|
|
198 | 198 | if (thisTime_last_block < startTime) and (thisTime_first_block > endTime): |
|
|
199 | 199 | return None |
|
|
200 | 200 | |
|
|
201 | 201 | return thisDatetime |
|
|
202 | 202 | |
|
|
203 | 203 | def isFolderInDateRange(folder, startDate=None, endDate=None): |
|
|
204 | 204 | """ |
|
|
205 | 205 | Retorna 1 si el archivo de datos se encuentra dentro del rango de horas especificado. |
|
|
206 | 206 | |
|
|
207 | 207 | Inputs: |
|
|
208 | 208 | folder : nombre completo del directorio. |
|
|
209 | 209 | Su formato deberia ser "/path_root/?YYYYDDD" |
|
|
210 | 210 | |
|
|
211 | 211 | siendo: |
|
|
212 | 212 | YYYY : Anio (ejemplo 2015) |
|
|
213 | 213 | DDD : Dia del anio (ejemplo 305) |
|
|
214 | 214 | |
|
|
215 | 215 | startDate : fecha inicial del rango seleccionado en formato datetime.date |
|
|
216 | 216 | |
|
|
217 | 217 | endDate : fecha final del rango seleccionado en formato datetime.date |
|
|
218 | 218 | |
|
|
219 | 219 | Return: |
|
|
220 | 220 | Boolean : Retorna True si el archivo de datos contiene datos en el rango de |
|
|
221 | 221 | fecha especificado, de lo contrario retorna False. |
|
|
222 | 222 | Excepciones: |
|
|
223 | 223 | Si el directorio no tiene el formato adecuado |
|
|
224 | 224 | """ |
|
|
225 | 225 | |
|
|
226 | 226 | basename = os.path.basename(folder) |
|
|
227 | 227 | |
|
|
228 | 228 | if not isRadarFolder(basename): |
|
|
229 | 229 | print "The folder %s has not the rigth format" %folder |
|
|
230 | 230 | return 0 |
|
|
231 | 231 | |
|
|
232 | 232 | if startDate and endDate: |
|
|
233 | 233 | thisDate = getDateFromRadarFolder(basename) |
|
|
234 | 234 | |
|
|
235 | 235 | if thisDate < startDate: |
|
|
236 | 236 | return 0 |
|
|
237 | 237 | |
|
|
238 | 238 | if thisDate > endDate: |
|
|
239 | 239 | return 0 |
|
|
240 | 240 | |
|
|
241 | 241 | return 1 |
|
|
242 | 242 | |
|
|
243 | 243 | def isFileInDateRange(filename, startDate=None, endDate=None): |
|
|
244 | 244 | """ |
|
|
245 | 245 | Retorna 1 si el archivo de datos se encuentra dentro del rango de horas especificado. |
|
|
246 | 246 | |
|
|
247 | 247 | Inputs: |
|
|
248 | 248 | filename : nombre completo del archivo de datos en formato Jicamarca (.r) |
|
|
249 | 249 | |
|
|
250 | 250 | Su formato deberia ser "?YYYYDDDsss" |
|
|
251 | 251 | |
|
|
252 | 252 | siendo: |
|
|
253 | 253 | YYYY : Anio (ejemplo 2015) |
|
|
254 | 254 | DDD : Dia del anio (ejemplo 305) |
|
|
255 | 255 | sss : set |
|
|
256 | 256 | |
|
|
257 | 257 | startDate : fecha inicial del rango seleccionado en formato datetime.date |
|
|
258 | 258 | |
|
|
259 | 259 | endDate : fecha final del rango seleccionado en formato datetime.date |
|
|
260 | 260 | |
|
|
261 | 261 | Return: |
|
|
262 | 262 | Boolean : Retorna True si el archivo de datos contiene datos en el rango de |
|
|
263 | 263 | fecha especificado, de lo contrario retorna False. |
|
|
264 | 264 | Excepciones: |
|
|
265 | 265 | Si el archivo no tiene el formato adecuado |
|
|
266 | 266 | """ |
|
|
267 | 267 | |
|
|
268 | 268 | basename = os.path.basename(filename) |
|
|
269 | 269 | |
|
|
270 | 270 | if not isRadarFile(basename): |
|
|
271 | 271 | print "The filename %s has not the rigth format" %filename |
|
|
272 | 272 | return 0 |
|
|
273 | 273 | |
|
|
274 | 274 | if startDate and endDate: |
|
|
275 | 275 | thisDate = getDateFromRadarFile(basename) |
|
|
276 | 276 | |
|
|
277 | 277 | if thisDate < startDate: |
|
|
278 | 278 | return 0 |
|
|
279 | 279 | |
|
|
280 | 280 | if thisDate > endDate: |
|
|
281 | 281 | return 0 |
|
|
282 | 282 | |
|
|
283 | 283 | return 1 |
|
|
284 | 284 | |
|
|
285 | 285 | def getFileFromSet(path, ext, set): |
|
|
286 | 286 | validFilelist = [] |
|
|
287 | 287 | fileList = os.listdir(path) |
|
|
288 | 288 | |
|
|
289 | 289 | # 0 1234 567 89A BCDE |
|
|
290 | 290 | # H YYYY DDD SSS .ext |
|
|
291 | 291 | |
|
|
292 | 292 | for thisFile in fileList: |
|
|
293 | 293 | try: |
|
|
294 | 294 | year = int(thisFile[1:5]) |
|
|
295 | 295 | doy = int(thisFile[5:8]) |
|
|
296 | 296 | except: |
|
|
297 | 297 | continue |
|
|
298 | 298 | |
|
|
299 | 299 | if (os.path.splitext(thisFile)[-1].lower() != ext.lower()): |
|
|
300 | 300 | continue |
|
|
301 | 301 | |
|
|
302 | 302 | validFilelist.append(thisFile) |
|
|
303 | 303 | |
|
|
304 | 304 | myfile = fnmatch.filter(validFilelist,'*%4.4d%3.3d%3.3d*'%(year,doy,set)) |
|
|
305 | 305 | |
|
|
306 | 306 | if len(myfile)!= 0: |
|
|
307 | 307 | return myfile[0] |
|
|
308 | 308 | else: |
|
|
309 | 309 | filename = '*%4.4d%3.3d%3.3d%s'%(year,doy,set,ext.lower()) |
|
|
310 | 310 | print 'the filename %s does not exist'%filename |
|
|
311 | 311 | print '...going to the last file: ' |
|
|
312 | 312 | |
|
|
313 | 313 | if validFilelist: |
|
|
314 | 314 | validFilelist = sorted( validFilelist, key=str.lower ) |
|
|
315 | 315 | return validFilelist[-1] |
|
|
316 | 316 | |
|
|
317 | 317 | return None |
|
|
318 | 318 | |
|
|
319 | 319 | def getlastFileFromPath(path, ext): |
|
|
320 | 320 | """ |
|
|
321 | 321 | Depura el fileList dejando solo los que cumplan el formato de "PYYYYDDDSSS.ext" |
|
|
322 | 322 | al final de la depuracion devuelve el ultimo file de la lista que quedo. |
|
|
323 | 323 | |
|
|
324 | 324 | Input: |
|
|
325 | 325 | fileList : lista conteniendo todos los files (sin path) que componen una determinada carpeta |
|
|
326 | 326 | ext : extension de los files contenidos en una carpeta |
|
|
327 | 327 | |
|
|
328 | 328 | Return: |
|
|
329 | 329 | El ultimo file de una determinada carpeta, no se considera el path. |
|
|
330 | 330 | """ |
|
|
331 | 331 | validFilelist = [] |
|
|
332 | 332 | fileList = os.listdir(path) |
|
|
333 | 333 | |
|
|
334 | 334 | # 0 1234 567 89A BCDE |
|
|
335 | 335 | # H YYYY DDD SSS .ext |
|
|
336 | 336 | |
|
|
337 | 337 | for thisFile in fileList: |
|
|
338 | 338 | |
|
|
339 | 339 | year = thisFile[1:5] |
|
|
340 | 340 | if not isNumber(year): |
|
|
341 | 341 | continue |
|
|
342 | 342 | |
|
|
343 | 343 | doy = thisFile[5:8] |
|
|
344 | 344 | if not isNumber(doy): |
|
|
345 | 345 | continue |
|
|
346 | 346 | |
|
|
347 | 347 | year = int(year) |
|
|
348 | 348 | doy = int(doy) |
|
|
349 | 349 | |
|
|
350 | 350 | if (os.path.splitext(thisFile)[-1].lower() != ext.lower()): |
|
|
351 | 351 | continue |
|
|
352 | 352 | |
|
|
353 | 353 | validFilelist.append(thisFile) |
|
|
354 | 354 | |
|
|
355 | 355 | if validFilelist: |
|
|
356 | 356 | validFilelist = sorted( validFilelist, key=str.lower ) |
|
|
357 | 357 | return validFilelist[-1] |
|
|
358 | 358 | |
|
|
359 | 359 | return None |
|
|
360 | 360 | |
|
|
361 | 361 | def checkForRealPath(path, foldercounter, year, doy, set, ext): |
|
|
362 | 362 | """ |
|
|
363 | 363 | Por ser Linux Case Sensitive entonces checkForRealPath encuentra el nombre correcto de un path, |
|
|
364 | 364 | Prueba por varias combinaciones de nombres entre mayusculas y minusculas para determinar |
|
|
365 | 365 | el path exacto de un determinado file. |
|
|
366 | 366 | |
|
|
367 | 367 | Example : |
|
|
368 | 368 | nombre correcto del file es .../.../D2009307/P2009307367.ext |
|
|
369 | 369 | |
|
|
370 | 370 | Entonces la funcion prueba con las siguientes combinaciones |
|
|
371 | 371 | .../.../y2009307367.ext |
|
|
372 | 372 | .../.../Y2009307367.ext |
|
|
373 | 373 | .../.../x2009307/y2009307367.ext |
|
|
374 | 374 | .../.../x2009307/Y2009307367.ext |
|
|
375 | 375 | .../.../X2009307/y2009307367.ext |
|
|
376 | 376 | .../.../X2009307/Y2009307367.ext |
|
|
377 | 377 | siendo para este caso, la ultima combinacion de letras, identica al file buscado |
|
|
378 | 378 | |
|
|
379 | 379 | Return: |
|
|
380 | 380 | Si encuentra la cobinacion adecuada devuelve el path completo y el nombre del file |
|
|
381 | 381 | caso contrario devuelve None como path y el la ultima combinacion de nombre en mayusculas |
|
|
382 | 382 | para el filename |
|
|
383 | 383 | """ |
|
|
384 | 384 | fullfilename = None |
|
|
385 | 385 | find_flag = False |
|
|
386 | 386 | filename = None |
|
|
387 | 387 | |
|
|
388 | 388 | prefixDirList = [None,'d','D'] |
|
|
389 | 389 | if ext.lower() == ".r": #voltage |
|
|
390 | 390 | prefixFileList = ['d','D'] |
|
|
391 | 391 | elif ext.lower() == ".pdata": #spectra |
|
|
392 | 392 | prefixFileList = ['p','P'] |
|
|
393 | 393 | else: |
|
|
394 | 394 | return None, filename |
|
|
395 | 395 | |
|
|
396 | 396 | #barrido por las combinaciones posibles |
|
|
397 | 397 | for prefixDir in prefixDirList: |
|
|
398 | 398 | thispath = path |
|
|
399 | 399 | if prefixDir != None: |
|
|
400 | 400 | #formo el nombre del directorio xYYYYDDD (x=d o x=D) |
|
|
401 | 401 | if foldercounter == 0: |
|
|
402 | 402 | thispath = os.path.join(path, "%s%04d%03d" % ( prefixDir, year, doy )) |
|
|
403 | 403 | else: |
|
|
404 | 404 | thispath = os.path.join(path, "%s%04d%03d_%02d" % ( prefixDir, year, doy , foldercounter)) |
|
|
405 | 405 | for prefixFile in prefixFileList: #barrido por las dos combinaciones posibles de "D" |
|
|
406 | 406 | filename = "%s%04d%03d%03d%s" % ( prefixFile, year, doy, set, ext ) #formo el nombre del file xYYYYDDDSSS.ext |
|
|
407 | 407 | fullfilename = os.path.join( thispath, filename ) #formo el path completo |
|
|
408 | 408 | |
|
|
409 | 409 | if os.path.exists( fullfilename ): #verifico que exista |
|
|
410 | 410 | find_flag = True |
|
|
411 | 411 | break |
|
|
412 | 412 | if find_flag: |
|
|
413 | 413 | break |
|
|
414 | 414 | |
|
|
415 | 415 | if not(find_flag): |
|
|
416 | 416 | return None, filename |
|
|
417 | 417 | |
|
|
418 | 418 | return fullfilename, filename |
|
|
419 | 419 | |
|
|
420 | 420 | def isRadarFolder(folder): |
|
|
421 | 421 | try: |
|
|
422 | 422 | year = int(folder[1:5]) |
|
|
423 | 423 | doy = int(folder[5:8]) |
|
|
424 | 424 | except: |
|
|
425 | 425 | return 0 |
|
|
426 | 426 | |
|
|
427 | 427 | return 1 |
|
|
428 | 428 | |
|
|
429 | 429 | def isRadarFile(file): |
|
|
430 | 430 | try: |
|
|
431 | 431 | year = int(file[1:5]) |
|
|
432 | 432 | doy = int(file[5:8]) |
|
|
433 | 433 | set = int(file[8:11]) |
|
|
434 | 434 | except: |
|
|
435 | 435 | return 0 |
|
|
436 | 436 | |
|
|
437 | 437 | return 1 |
|
|
438 | 438 | |
|
|
439 | 439 | def getDateFromRadarFile(file): |
|
|
440 | 440 | try: |
|
|
441 | 441 | year = int(file[1:5]) |
|
|
442 | 442 | doy = int(file[5:8]) |
|
|
443 | 443 | set = int(file[8:11]) |
|
|
444 | 444 | except: |
|
|
445 | 445 | return None |
|
|
446 | 446 | |
|
|
447 | 447 | thisDate = datetime.date(year, 1, 1) + datetime.timedelta(doy-1) |
|
|
448 | 448 | return thisDate |
|
|
449 | 449 | |
|
|
450 | 450 | def getDateFromRadarFolder(folder): |
|
|
451 | 451 | try: |
|
|
452 | 452 | year = int(folder[1:5]) |
|
|
453 | 453 | doy = int(folder[5:8]) |
|
|
454 | 454 | except: |
|
|
455 | 455 | return None |
|
|
456 | 456 | |
|
|
457 | 457 | thisDate = datetime.date(year, 1, 1) + datetime.timedelta(doy-1) |
|
|
458 | 458 | return thisDate |
|
|
459 | 459 | |
|
|
460 | 460 | class JRODataIO: |
|
|
461 | 461 | |
|
|
462 | 462 | c = 3E8 |
|
|
463 | 463 | |
|
|
464 | 464 | isConfig = False |
|
|
465 | 465 | |
|
|
466 | 466 | basicHeaderObj = None |
|
|
467 | 467 | |
|
|
468 | 468 | systemHeaderObj = None |
|
|
469 | 469 | |
|
|
470 | 470 | radarControllerHeaderObj = None |
|
|
471 | 471 | |
|
|
472 | 472 | processingHeaderObj = None |
|
|
473 | 473 | |
|
|
474 | 474 | dtype = None |
|
|
475 | 475 | |
|
|
476 | 476 | pathList = [] |
|
|
477 | 477 | |
|
|
478 | 478 | filenameList = [] |
|
|
479 | 479 | |
|
|
480 | 480 | filename = None |
|
|
481 | 481 | |
|
|
482 | 482 | ext = None |
|
|
483 | 483 | |
|
|
484 | 484 | flagIsNewFile = 1 |
|
|
485 | 485 | |
|
|
486 | 486 | flagDiscontinuousBlock = 0 |
|
|
487 | 487 | |
|
|
488 | 488 | flagIsNewBlock = 0 |
|
|
489 | 489 | |
|
|
490 | 490 | fp = None |
|
|
491 | 491 | |
|
|
492 | 492 | firstHeaderSize = 0 |
|
|
493 | 493 | |
|
|
494 | 494 | basicHeaderSize = 24 |
|
|
495 | 495 | |
|
|
496 | 496 | versionFile = 1103 |
|
|
497 | 497 | |
|
|
498 | 498 | fileSize = None |
|
|
499 | 499 | |
|
|
500 | 500 | # ippSeconds = None |
|
|
501 | 501 | |
|
|
502 | 502 | fileSizeByHeader = None |
|
|
503 | 503 | |
|
|
504 | 504 | fileIndex = None |
|
|
505 | 505 | |
|
|
506 | 506 | profileIndex = None |
|
|
507 | 507 | |
|
|
508 | 508 | blockIndex = None |
|
|
509 | 509 | |
|
|
510 | 510 | nTotalBlocks = None |
|
|
511 | 511 | |
|
|
512 | 512 | maxTimeStep = 30 |
|
|
513 | 513 | |
|
|
514 | 514 | lastUTTime = None |
|
|
515 | 515 | |
|
|
516 | 516 | datablock = None |
|
|
517 | 517 | |
|
|
518 | 518 | dataOut = None |
|
|
519 | 519 | |
|
|
520 | 520 | blocksize = None |
|
|
521 | 521 | |
|
|
522 | 522 | getByBlock = False |
|
|
523 | 523 | |
|
|
524 | 524 | def __init__(self): |
|
|
525 | 525 | |
|
|
526 | 526 | raise NotImplementedError |
|
|
527 | 527 | |
|
|
528 | 528 | def run(self): |
|
|
529 | 529 | |
|
|
530 | 530 | raise NotImplementedError |
|
|
531 | 531 | |
|
|
532 | 532 | def getDtypeWidth(self): |
|
|
533 | 533 | |
|
|
534 | 534 | dtype_index = get_dtype_index(self.dtype) |
|
|
535 | 535 | dtype_width = get_dtype_width(dtype_index) |
|
|
536 | 536 | |
|
|
537 | 537 | return dtype_width |
|
|
538 | 538 | |
|
|
539 | 539 | class JRODataReader(JRODataIO): |
|
|
540 | 540 | |
|
|
541 | 541 | |
|
|
542 | 542 | online = 0 |
|
|
543 | 543 | |
|
|
544 | 544 | realtime = 0 |
|
|
545 | 545 | |
|
|
546 | 546 | nReadBlocks = 0 |
|
|
547 | 547 | |
|
|
548 | 548 | delay = 10 #number of seconds waiting a new file |
|
|
549 | 549 | |
|
|
550 | 550 | nTries = 3 #quantity tries |
|
|
551 | 551 | |
|
|
552 | 552 | nFiles = 3 #number of files for searching |
|
|
553 | 553 | |
|
|
554 | 554 | path = None |
|
|
555 | 555 | |
|
|
556 | 556 | foldercounter = 0 |
|
|
557 | 557 | |
|
|
558 | 558 | flagNoMoreFiles = 0 |
|
|
559 | 559 | |
|
|
560 | 560 | datetimeList = [] |
|
|
561 | 561 | |
|
|
562 | 562 | __isFirstTimeOnline = 1 |
|
|
563 | 563 | |
|
|
564 | 564 | __printInfo = True |
|
|
565 | 565 | |
|
|
566 | 566 | profileIndex = None |
|
|
567 | 567 | |
|
|
568 | 568 | nTxs = 1 |
|
|
569 | 569 | |
|
|
570 | 570 | txIndex = None |
|
|
571 | 571 | |
|
|
572 | 572 | #Added-------------------- |
|
|
573 | 573 | |
|
|
574 | 574 | selBlocksize = None |
|
|
575 | 575 | |
|
|
576 | 576 | selBlocktime = None |
|
|
577 | 577 | |
|
|
578 | 578 | |
|
|
579 | 579 | def __init__(self): |
|
|
580 | 580 | |
|
|
581 | 581 | """ |
|
|
582 | 582 | This class is used to find data files |
|
|
583 | 583 | |
|
|
584 | 584 | Example: |
|
|
585 | 585 | reader = JRODataReader() |
|
|
586 | 586 | fileList = reader.findDataFiles() |
|
|
587 | 587 | |
|
|
588 | 588 | """ |
|
|
589 | 589 | pass |
|
|
590 | 590 | |
|
|
591 | 591 | |
|
|
592 | 592 | def createObjByDefault(self): |
|
|
593 | 593 | """ |
|
|
594 | 594 | |
|
|
595 | 595 | """ |
|
|
596 | 596 | raise NotImplementedError |
|
|
597 | 597 | |
|
|
598 | 598 | def getBlockDimension(self): |
|
|
599 | 599 | |
|
|
600 | 600 | raise NotImplementedError |
|
|
601 | 601 | |
|
|
602 | 602 | def __searchFilesOffLine(self, |
|
|
603 | 603 | path, |
|
|
604 | 604 | startDate=None, |
|
|
605 | 605 | endDate=None, |
|
|
606 | 606 | startTime=datetime.time(0,0,0), |
|
|
607 | 607 | endTime=datetime.time(23,59,59), |
|
|
608 | 608 | set=None, |
|
|
609 | 609 | expLabel='', |
|
|
610 | 610 | ext='.r', |
|
|
611 | 611 | queue=None, |
|
|
612 | 612 | cursor=None, |
|
|
613 | 613 | skip=None, |
|
|
614 | 614 | walk=True): |
|
|
615 | 615 | |
|
|
616 | 616 | self.filenameList = [] |
|
|
617 | 617 | self.datetimeList = [] |
|
|
618 | 618 | |
|
|
619 | 619 | pathList = [] |
|
|
620 | 620 | |
|
|
621 | 621 | dateList, pathList = self.findDatafiles(path, startDate, endDate, expLabel, ext, walk, include_path=True) |
|
|
622 | 622 | |
|
|
623 | 623 | if dateList == []: |
|
|
624 | 624 | # print "[Reading] Date range selected invalid [%s - %s]: No *%s files in %s)" %(startDate, endDate, ext, path) |
|
|
625 | 625 | return None, None |
|
|
626 | 626 | |
|
|
627 | 627 | if len(dateList) > 1: |
|
|
628 | 628 | print "[Reading] Data found for date range [%s - %s]: total days = %d" %(startDate, endDate, len(dateList)) |
|
|
629 | 629 | else: |
|
|
630 | 630 | print "[Reading] Data found for date range [%s - %s]: date = %s" %(startDate, endDate, dateList[0]) |
|
|
631 | 631 | |
|
|
632 | 632 | filenameList = [] |
|
|
633 | 633 | datetimeList = [] |
|
|
634 | 634 | |
|
|
635 | 635 | for thisPath in pathList: |
|
|
636 | 636 | # thisPath = pathList[pathDict[file]] |
|
|
637 | 637 | |
|
|
638 | 638 | fileList = glob.glob1(thisPath, "*%s" %ext) |
|
|
639 | 639 | fileList.sort() |
|
|
640 | 640 | |
|
|
641 | 641 | skippedFileList = [] |
|
|
642 | 642 | |
|
|
643 | 643 | if cursor is not None and skip is not None: |
|
|
644 | 644 | # if cursor*skip > len(fileList): |
|
|
645 | 645 | if skip == 0: |
|
|
646 | 646 | if queue is not None: |
|
|
647 | 647 | queue.put(len(fileList)) |
|
|
648 | 648 | skippedFileList = [] |
|
|
649 | 649 | else: |
|
|
650 | 650 | skippedFileList = fileList[cursor*skip: cursor*skip + skip] |
|
|
651 | 651 | |
|
|
652 | 652 | else: |
|
|
653 | 653 | skippedFileList = fileList |
|
|
654 | 654 | |
|
|
655 | 655 | for file in skippedFileList: |
|
|
656 | 656 | |
|
|
657 | 657 | filename = os.path.join(thisPath,file) |
|
|
658 | 658 | |
|
|
659 | 659 | if not isFileInDateRange(filename, startDate, endDate): |
|
|
660 | 660 | continue |
|
|
661 | 661 | |
|
|
662 | 662 | thisDatetime = isFileInTimeRange(filename, startDate, endDate, startTime, endTime) |
|
|
663 | 663 | |
|
|
664 | 664 | if not(thisDatetime): |
|
|
665 | 665 | continue |
|
|
666 | 666 | |
|
|
667 | 667 | filenameList.append(filename) |
|
|
668 | 668 | datetimeList.append(thisDatetime) |
|
|
669 | 669 | |
|
|
670 | 670 | if not(filenameList): |
|
|
671 | 671 | print "[Reading] Time range selected invalid [%s - %s]: No *%s files in %s)" %(startTime, endTime, ext, path) |
|
|
672 | 672 | return None, None |
|
|
673 | 673 | |
|
|
674 | 674 | print "[Reading] %d file(s) was(were) found in time range: %s - %s" %(len(filenameList), startTime, endTime) |
|
|
675 | 675 | |
|
|
676 | 676 | |
|
|
677 | 677 | for i in range(len(filenameList)): |
|
|
678 | 678 | print "[Reading] %s -> [%s]" %(filenameList[i], datetimeList[i].ctime()) |
|
|
679 | 679 | |
|
|
680 | 680 | self.filenameList = filenameList |
|
|
681 | 681 | self.datetimeList = datetimeList |
|
|
682 | 682 | |
|
|
683 | 683 | return pathList, filenameList |
|
|
684 | 684 | |
|
|
685 | 685 | def __searchFilesOnLine(self, path, expLabel = "", ext = None, walk=True, set=None): |
|
|
686 | 686 | |
|
|
687 | 687 | """ |
|
|
688 | 688 | Busca el ultimo archivo de la ultima carpeta (determinada o no por startDateTime) y |
|
|
689 | 689 | devuelve el archivo encontrado ademas de otros datos. |
|
|
690 | 690 | |
|
|
691 | 691 | Input: |
|
|
692 | 692 | path : carpeta donde estan contenidos los files que contiene data |
|
|
693 | 693 | |
|
|
694 | 694 | expLabel : Nombre del subexperimento (subfolder) |
|
|
695 | 695 | |
|
|
696 | 696 | ext : extension de los files |
|
|
697 | 697 | |
|
|
698 | 698 | walk : Si es habilitado no realiza busquedas dentro de los ubdirectorios (doypath) |
|
|
699 | 699 | |
|
|
700 | 700 | Return: |
|
|
701 | 701 | directory : eL directorio donde esta el file encontrado |
|
|
702 | 702 | filename : el ultimo file de una determinada carpeta |
|
|
703 | 703 | year : el anho |
|
|
704 | 704 | doy : el numero de dia del anho |
|
|
705 | 705 | set : el set del archivo |
|
|
706 | 706 | |
|
|
707 | 707 | |
|
|
708 | 708 | """ |
|
|
709 | 709 | if not os.path.isdir(path): |
|
|
710 | 710 | return None, None, None, None, None, None |
|
|
711 | 711 | |
|
|
712 | 712 | dirList = [] |
|
|
713 | 713 | |
|
|
714 | 714 | if not walk: |
|
|
715 | 715 | fullpath = path |
|
|
716 | 716 | foldercounter = 0 |
|
|
717 | 717 | else: |
|
|
718 | 718 | #Filtra solo los directorios |
|
|
719 | 719 | for thisPath in os.listdir(path): |
|
|
720 | 720 | if not os.path.isdir(os.path.join(path,thisPath)): |
|
|
721 | 721 | continue |
|
|
722 | 722 | if not isRadarFolder(thisPath): |
|
|
723 | 723 | continue |
|
|
724 | 724 | |
|
|
725 | 725 | dirList.append(thisPath) |
|
|
726 | 726 | |
|
|
727 | 727 | if not(dirList): |
|
|
728 | 728 | return None, None, None, None, None, None |
|
|
729 | 729 | |
|
|
730 | 730 | dirList = sorted( dirList, key=str.lower ) |
|
|
731 | 731 | |
|
|
732 | 732 | doypath = dirList[-1] |
|
|
733 | 733 | foldercounter = int(doypath.split('_')[1]) if len(doypath.split('_'))>1 else 0 |
|
|
734 | 734 | fullpath = os.path.join(path, doypath, expLabel) |
|
|
735 | 735 | |
|
|
736 | 736 | |
|
|
737 | 737 | print "[Reading] %s folder was found: " %(fullpath ) |
|
|
738 | 738 | |
|
|
739 | 739 | if set == None: |
|
|
740 | 740 | filename = getlastFileFromPath(fullpath, ext) |
|
|
741 | 741 | else: |
|
|
742 | 742 | filename = getFileFromSet(fullpath, ext, set) |
|
|
743 | 743 | |
|
|
744 | 744 | if not(filename): |
|
|
745 | 745 | return None, None, None, None, None, None |
|
|
746 | 746 | |
|
|
747 | 747 | print "[Reading] %s file was found" %(filename) |
|
|
748 | 748 | |
|
|
749 | 749 | if not(self.__verifyFile(os.path.join(fullpath, filename))): |
|
|
750 | 750 | return None, None, None, None, None, None |
|
|
751 | 751 | |
|
|
752 | 752 | year = int( filename[1:5] ) |
|
|
753 | 753 | doy = int( filename[5:8] ) |
|
|
754 | 754 | set = int( filename[8:11] ) |
|
|
755 | 755 | |
|
|
756 | 756 | return fullpath, foldercounter, filename, year, doy, set |
|
|
757 | 757 | |
|
|
758 | 758 | def __setNextFileOffline(self): |
|
|
759 | 759 | |
|
|
760 | 760 | idFile = self.fileIndex |
|
|
761 | 761 | |
|
|
762 | 762 | while (True): |
|
|
763 | 763 | idFile += 1 |
|
|
764 | 764 | if not(idFile < len(self.filenameList)): |
|
|
765 | 765 | self.flagNoMoreFiles = 1 |
|
|
766 | 766 | # print "[Reading] No more Files" |
|
|
767 | 767 | return 0 |
|
|
768 | 768 | |
|
|
769 | 769 | filename = self.filenameList[idFile] |
|
|
770 | 770 | |
|
|
771 | 771 | if not(self.__verifyFile(filename)): |
|
|
772 | 772 | continue |
|
|
773 | 773 | |
|
|
774 | 774 | fileSize = os.path.getsize(filename) |
|
|
775 | 775 | fp = open(filename,'rb') |
|
|
776 | 776 | break |
|
|
777 | 777 | |
|
|
778 | 778 | self.flagIsNewFile = 1 |
|
|
779 | 779 | self.fileIndex = idFile |
|
|
780 | 780 | self.filename = filename |
|
|
781 | 781 | self.fileSize = fileSize |
|
|
782 | 782 | self.fp = fp |
|
|
783 | 783 | |
|
|
784 | 784 | # print "[Reading] Setting the file: %s"%self.filename |
|
|
785 | 785 | |
|
|
786 | 786 | return 1 |
|
|
787 | 787 | |
|
|
788 | 788 | def __setNextFileOnline(self): |
|
|
789 | 789 | """ |
|
|
790 | 790 | Busca el siguiente file que tenga suficiente data para ser leida, dentro de un folder especifico, si |
|
|
791 | 791 | no encuentra un file valido espera un tiempo determinado y luego busca en los posibles n files |
|
|
792 | 792 | siguientes. |
|
|
793 | 793 | |
|
|
794 | 794 | Affected: |
|
|
795 | 795 | self.flagIsNewFile |
|
|
796 | 796 | self.filename |
|
|
797 | 797 | self.fileSize |
|
|
798 | 798 | self.fp |
|
|
799 | 799 | self.set |
|
|
800 | 800 | self.flagNoMoreFiles |
|
|
801 | 801 | |
|
|
802 | 802 | Return: |
|
|
803 | 803 | 0 : si luego de una busqueda del siguiente file valido este no pudo ser encontrado |
|
|
804 | 804 | 1 : si el file fue abierto con exito y esta listo a ser leido |
|
|
805 | 805 | |
|
|
806 | 806 | Excepciones: |
|
|
807 | 807 | Si un determinado file no puede ser abierto |
|
|
808 | 808 | """ |
|
|
809 | 809 | nFiles = 0 |
|
|
810 | 810 | fileOk_flag = False |
|
|
811 | 811 | firstTime_flag = True |
|
|
812 | 812 | |
|
|
813 | 813 | self.set += 1 |
|
|
814 | 814 | |
|
|
815 | 815 | if self.set > 999: |
|
|
816 | 816 | self.set = 0 |
|
|
817 | 817 | self.foldercounter += 1 |
|
|
818 | 818 | |
|
|
819 | 819 | #busca el 1er file disponible |
|
|
820 | 820 | fullfilename, filename = checkForRealPath( self.path, self.foldercounter, self.year, self.doy, self.set, self.ext ) |
|
|
821 | 821 | if fullfilename: |
|
|
822 | 822 | if self.__verifyFile(fullfilename, False): |
|
|
823 | 823 | fileOk_flag = True |
|
|
824 | 824 | |
|
|
825 | 825 | #si no encuentra un file entonces espera y vuelve a buscar |
|
|
826 | 826 | if not(fileOk_flag): |
|
|
827 | 827 | for nFiles in range(self.nFiles+1): #busco en los siguientes self.nFiles+1 files posibles |
|
|
828 | 828 | |
|
|
829 | 829 | if firstTime_flag: #si es la 1era vez entonces hace el for self.nTries veces |
|
|
830 | 830 | tries = self.nTries |
|
|
831 | 831 | else: |
|
|
832 | 832 | tries = 1 #si no es la 1era vez entonces solo lo hace una vez |
|
|
833 | 833 | |
|
|
834 | 834 | for nTries in range( tries ): |
|
|
835 | 835 | if firstTime_flag: |
|
|
836 | 836 | print "\t[Reading] Waiting %0.2f sec for the next file: \"%s\" , try %03d ..." % ( self.delay, filename, nTries+1 ) |
|
|
837 | 837 | sleep( self.delay ) |
|
|
838 | 838 | else: |
|
|
839 | 839 | print "\t[Reading] Searching the next \"%s%04d%03d%03d%s\" file ..." % (self.optchar, self.year, self.doy, self.set, self.ext) |
|
|
840 | 840 | |
|
|
841 | 841 | fullfilename, filename = checkForRealPath( self.path, self.foldercounter, self.year, self.doy, self.set, self.ext ) |
|
|
842 | 842 | if fullfilename: |
|
|
843 | 843 | if self.__verifyFile(fullfilename): |
|
|
844 | 844 | fileOk_flag = True |
|
|
845 | 845 | break |
|
|
846 | 846 | |
|
|
847 | 847 | if fileOk_flag: |
|
|
848 | 848 | break |
|
|
849 | 849 | |
|
|
850 | 850 | firstTime_flag = False |
|
|
851 | 851 | |
|
|
852 | 852 | print "\t[Reading] Skipping the file \"%s\" due to this file doesn't exist" % filename |
|
|
853 | 853 | self.set += 1 |
|
|
854 | 854 | |
|
|
855 | 855 | if nFiles == (self.nFiles-1): #si no encuentro el file buscado cambio de carpeta y busco en la siguiente carpeta |
|
|
856 | 856 | self.set = 0 |
|
|
857 | 857 | self.doy += 1 |
|
|
858 | 858 | self.foldercounter = 0 |
|
|
859 | 859 | |
|
|
860 | 860 | if fileOk_flag: |
|
|
861 | 861 | self.fileSize = os.path.getsize( fullfilename ) |
|
|
862 | 862 | self.filename = fullfilename |
|
|
863 | 863 | self.flagIsNewFile = 1 |
|
|
864 | 864 | if self.fp != None: self.fp.close() |
|
|
865 | 865 | self.fp = open(fullfilename, 'rb') |
|
|
866 | 866 | self.flagNoMoreFiles = 0 |
|
|
867 | 867 | # print '[Reading] Setting the file: %s' % fullfilename |
|
|
868 | 868 | else: |
|
|
869 | 869 | self.fileSize = 0 |
|
|
870 | 870 | self.filename = None |
|
|
871 | 871 | self.flagIsNewFile = 0 |
|
|
872 | 872 | self.fp = None |
|
|
873 | 873 | self.flagNoMoreFiles = 1 |
|
|
874 | 874 | # print '[Reading] No more files to read' |
|
|
875 | 875 | |
|
|
876 | 876 | return fileOk_flag |
|
|
877 | 877 | |
|
|
878 | 878 | def setNextFile(self): |
|
|
879 | 879 | if self.fp != None: |
|
|
880 | 880 | self.fp.close() |
|
|
881 | 881 | |
|
|
882 | 882 | if self.online: |
|
|
883 | 883 | newFile = self.__setNextFileOnline() |
|
|
884 | 884 | else: |
|
|
885 | 885 | newFile = self.__setNextFileOffline() |
|
|
886 | 886 | |
|
|
887 | 887 | if not(newFile): |
|
|
888 | 888 | print '[Reading] No more files to read' |
|
|
889 | 889 | return 0 |
|
|
890 | 890 | |
|
|
891 | if self.verbose: | |
|
|
891 | 892 | print '[Reading] Setting the file: %s' % self.filename |
|
|
892 | 893 | |
|
|
893 | 894 | self.__readFirstHeader() |
|
|
894 | 895 | self.nReadBlocks = 0 |
|
|
895 | 896 | return 1 |
|
|
896 | 897 | |
|
|
897 | 898 | def __waitNewBlock(self): |
|
|
898 | 899 | """ |
|
|
899 | 900 | Return 1 si se encontro un nuevo bloque de datos, 0 de otra forma. |
|
|
900 | 901 | |
|
|
901 | 902 | Si el modo de lectura es OffLine siempre retorn 0 |
|
|
902 | 903 | """ |
|
|
903 | 904 | if not self.online: |
|
|
904 | 905 | return 0 |
|
|
905 | 906 | |
|
|
906 | 907 | if (self.nReadBlocks >= self.processingHeaderObj.dataBlocksPerFile): |
|
|
907 | 908 | return 0 |
|
|
908 | 909 | |
|
|
909 | 910 | currentPointer = self.fp.tell() |
|
|
910 | 911 | |
|
|
911 | 912 | neededSize = self.processingHeaderObj.blockSize + self.basicHeaderSize |
|
|
912 | 913 | |
|
|
913 | 914 | for nTries in range( self.nTries ): |
|
|
914 | 915 | |
|
|
915 | 916 | self.fp.close() |
|
|
916 | 917 | self.fp = open( self.filename, 'rb' ) |
|
|
917 | 918 | self.fp.seek( currentPointer ) |
|
|
918 | 919 | |
|
|
919 | 920 | self.fileSize = os.path.getsize( self.filename ) |
|
|
920 | 921 | currentSize = self.fileSize - currentPointer |
|
|
921 | 922 | |
|
|
922 | 923 | if ( currentSize >= neededSize ): |
|
|
923 | 924 | self.basicHeaderObj.read(self.fp) |
|
|
924 | 925 | return 1 |
|
|
925 | 926 | |
|
|
926 | 927 | if self.fileSize == self.fileSizeByHeader: |
|
|
927 | 928 | # self.flagEoF = True |
|
|
928 | 929 | return 0 |
|
|
929 | 930 | |
|
|
930 | 931 | print "[Reading] Waiting %0.2f seconds for the next block, try %03d ..." % (self.delay, nTries+1) |
|
|
931 | 932 | sleep( self.delay ) |
|
|
932 | 933 | |
|
|
933 | 934 | |
|
|
934 | 935 | return 0 |
|
|
935 | 936 | |
|
|
936 | 937 | def waitDataBlock(self,pointer_location): |
|
|
937 | 938 | |
|
|
938 | 939 | currentPointer = pointer_location |
|
|
939 | 940 | |
|
|
940 | 941 | neededSize = self.processingHeaderObj.blockSize #+ self.basicHeaderSize |
|
|
941 | 942 | |
|
|
942 | 943 | for nTries in range( self.nTries ): |
|
|
943 | 944 | self.fp.close() |
|
|
944 | 945 | self.fp = open( self.filename, 'rb' ) |
|
|
945 | 946 | self.fp.seek( currentPointer ) |
|
|
946 | 947 | |
|
|
947 | 948 | self.fileSize = os.path.getsize( self.filename ) |
|
|
948 | 949 | currentSize = self.fileSize - currentPointer |
|
|
949 | 950 | |
|
|
950 | 951 | if ( currentSize >= neededSize ): |
|
|
951 | 952 | return 1 |
|
|
952 | 953 | |
|
|
953 | 954 | print "[Reading] Waiting %0.2f seconds for the next block, try %03d ..." % (self.delay, nTries+1) |
|
|
954 | 955 | sleep( self.delay ) |
|
|
955 | 956 | |
|
|
956 | 957 | return 0 |
|
|
957 | 958 | |
|
|
958 | 959 | def __jumpToLastBlock(self): |
|
|
959 | 960 | |
|
|
960 | 961 | if not(self.__isFirstTimeOnline): |
|
|
961 | 962 | return |
|
|
962 | 963 | |
|
|
963 | 964 | csize = self.fileSize - self.fp.tell() |
|
|
964 | 965 | blocksize = self.processingHeaderObj.blockSize |
|
|
965 | 966 | |
|
|
966 | 967 | #salta el primer bloque de datos |
|
|
967 | 968 | if csize > self.processingHeaderObj.blockSize: |
|
|
968 | 969 | self.fp.seek(self.fp.tell() + blocksize) |
|
|
969 | 970 | else: |
|
|
970 | 971 | return |
|
|
971 | 972 | |
|
|
972 | 973 | csize = self.fileSize - self.fp.tell() |
|
|
973 | 974 | neededsize = self.processingHeaderObj.blockSize + self.basicHeaderSize |
|
|
974 | 975 | while True: |
|
|
975 | 976 | |
|
|
976 | 977 | if self.fp.tell()<self.fileSize: |
|
|
977 | 978 | self.fp.seek(self.fp.tell() + neededsize) |
|
|
978 | 979 | else: |
|
|
979 | 980 | self.fp.seek(self.fp.tell() - neededsize) |
|
|
980 | 981 | break |
|
|
981 | 982 | |
|
|
982 | 983 | # csize = self.fileSize - self.fp.tell() |
|
|
983 | 984 | # neededsize = self.processingHeaderObj.blockSize + self.basicHeaderSize |
|
|
984 | 985 | # factor = int(csize/neededsize) |
|
|
985 | 986 | # if factor > 0: |
|
|
986 | 987 | # self.fp.seek(self.fp.tell() + factor*neededsize) |
|
|
987 | 988 | |
|
|
988 | 989 | self.flagIsNewFile = 0 |
|
|
989 | 990 | self.__isFirstTimeOnline = 0 |
|
|
990 | 991 | |
|
|
991 | 992 | def __setNewBlock(self): |
|
|
992 | 993 | |
|
|
993 | 994 | if self.fp == None: |
|
|
994 | 995 | return 0 |
|
|
995 | 996 | |
|
|
996 | 997 | # if self.online: |
|
|
997 | 998 | # self.__jumpToLastBlock() |
|
|
998 | 999 | |
|
|
999 | 1000 | if self.flagIsNewFile: |
|
|
1000 | 1001 | self.lastUTTime = self.basicHeaderObj.utc |
|
|
1001 | 1002 | return 1 |
|
|
1002 | 1003 | |
|
|
1003 | 1004 | if self.realtime: |
|
|
1004 | 1005 | self.flagDiscontinuousBlock = 1 |
|
|
1005 | 1006 | if not(self.setNextFile()): |
|
|
1006 | 1007 | return 0 |
|
|
1007 | 1008 | else: |
|
|
1008 | 1009 | return 1 |
|
|
1009 | 1010 | |
|
|
1010 | 1011 | currentSize = self.fileSize - self.fp.tell() |
|
|
1011 | 1012 | neededSize = self.processingHeaderObj.blockSize + self.basicHeaderSize |
|
|
1012 | 1013 | |
|
|
1013 | 1014 | if (currentSize >= neededSize): |
|
|
1014 | 1015 | self.basicHeaderObj.read(self.fp) |
|
|
1015 | 1016 | self.lastUTTime = self.basicHeaderObj.utc |
|
|
1016 | 1017 | return 1 |
|
|
1017 | 1018 | |
|
|
1018 | 1019 | if self.__waitNewBlock(): |
|
|
1019 | 1020 | self.lastUTTime = self.basicHeaderObj.utc |
|
|
1020 | 1021 | return 1 |
|
|
1021 | 1022 | |
|
|
1022 | 1023 | if not(self.setNextFile()): |
|
|
1023 | 1024 | return 0 |
|
|
1024 | 1025 | |
|
|
1025 | 1026 | deltaTime = self.basicHeaderObj.utc - self.lastUTTime # |
|
|
1026 | 1027 | self.lastUTTime = self.basicHeaderObj.utc |
|
|
1027 | 1028 | |
|
|
1028 | 1029 | self.flagDiscontinuousBlock = 0 |
|
|
1029 | 1030 | |
|
|
1030 | 1031 | if deltaTime > self.maxTimeStep: |
|
|
1031 | 1032 | self.flagDiscontinuousBlock = 1 |
|
|
1032 | 1033 | |
|
|
1033 | 1034 | return 1 |
|
|
1034 | 1035 | |
|
|
1035 | 1036 | def readNextBlock(self): |
|
|
1036 | 1037 | |
|
|
1037 | 1038 | #Skip block out of startTime and endTime |
|
|
1038 | 1039 | while True: |
|
|
1039 | 1040 | if not(self.__setNewBlock()): |
|
|
1040 | 1041 | return 0 |
|
|
1041 | 1042 | |
|
|
1042 | 1043 | if not(self.readBlock()): |
|
|
1043 | 1044 | return 0 |
|
|
1044 | 1045 | |
|
|
1045 | 1046 | self.getBasicHeader() |
|
|
1046 | 1047 | |
|
|
1047 | 1048 | if not isTimeInRange(self.dataOut.datatime.time(), self.startTime, self.endTime): |
|
|
1048 | 1049 | |
|
|
1049 | 1050 | print "[Reading] Block No. %d/%d -> %s [Skipping]" %(self.nReadBlocks, |
|
|
1050 | 1051 | self.processingHeaderObj.dataBlocksPerFile, |
|
|
1051 | 1052 | self.dataOut.datatime.ctime()) |
|
|
1052 | 1053 | continue |
|
|
1053 | 1054 | |
|
|
1054 | 1055 | break |
|
|
1055 | 1056 | |
|
|
1057 | if self.verbose: | |
|
|
1056 | 1058 | print "[Reading] Block No. %d/%d -> %s" %(self.nReadBlocks, |
|
|
1057 | 1059 | self.processingHeaderObj.dataBlocksPerFile, |
|
|
1058 | 1060 | self.dataOut.datatime.ctime()) |
|
|
1059 | 1061 | return 1 |
|
|
1060 | 1062 | |
|
|
1061 | 1063 | def __readFirstHeader(self): |
|
|
1062 | 1064 | |
|
|
1063 | 1065 | self.basicHeaderObj.read(self.fp) |
|
|
1064 | 1066 | self.systemHeaderObj.read(self.fp) |
|
|
1065 | 1067 | self.radarControllerHeaderObj.read(self.fp) |
|
|
1066 | 1068 | self.processingHeaderObj.read(self.fp) |
|
|
1067 | 1069 | |
|
|
1068 | 1070 | self.firstHeaderSize = self.basicHeaderObj.size |
|
|
1069 | 1071 | |
|
|
1070 | 1072 | datatype = int(numpy.log2((self.processingHeaderObj.processFlags & PROCFLAG.DATATYPE_MASK))-numpy.log2(PROCFLAG.DATATYPE_CHAR)) |
|
|
1071 | 1073 | if datatype == 0: |
|
|
1072 | 1074 | datatype_str = numpy.dtype([('real','<i1'),('imag','<i1')]) |
|
|
1073 | 1075 | elif datatype == 1: |
|
|
1074 | 1076 | datatype_str = numpy.dtype([('real','<i2'),('imag','<i2')]) |
|
|
1075 | 1077 | elif datatype == 2: |
|
|
1076 | 1078 | datatype_str = numpy.dtype([('real','<i4'),('imag','<i4')]) |
|
|
1077 | 1079 | elif datatype == 3: |
|
|
1078 | 1080 | datatype_str = numpy.dtype([('real','<i8'),('imag','<i8')]) |
|
|
1079 | 1081 | elif datatype == 4: |
|
|
1080 | 1082 | datatype_str = numpy.dtype([('real','<f4'),('imag','<f4')]) |
|
|
1081 | 1083 | elif datatype == 5: |
|
|
1082 | 1084 | datatype_str = numpy.dtype([('real','<f8'),('imag','<f8')]) |
|
|
1083 | 1085 | else: |
|
|
1084 | 1086 | raise ValueError, 'Data type was not defined' |
|
|
1085 | 1087 | |
|
|
1086 | 1088 | self.dtype = datatype_str |
|
|
1087 | 1089 | #self.ippSeconds = 2 * 1000 * self.radarControllerHeaderObj.ipp / self.c |
|
|
1088 | 1090 | self.fileSizeByHeader = self.processingHeaderObj.dataBlocksPerFile * self.processingHeaderObj.blockSize + self.firstHeaderSize + self.basicHeaderSize*(self.processingHeaderObj.dataBlocksPerFile - 1) |
|
|
1089 | 1091 | # self.dataOut.channelList = numpy.arange(self.systemHeaderObj.numChannels) |
|
|
1090 | 1092 | # self.dataOut.channelIndexList = numpy.arange(self.systemHeaderObj.numChannels) |
|
|
1091 | 1093 | self.getBlockDimension() |
|
|
1092 | 1094 | |
|
|
1093 | 1095 | def __verifyFile(self, filename, msgFlag=True): |
|
|
1094 | 1096 | |
|
|
1095 | 1097 | msg = None |
|
|
1096 | 1098 | |
|
|
1097 | 1099 | try: |
|
|
1098 | 1100 | fp = open(filename, 'rb') |
|
|
1099 | 1101 | except IOError: |
|
|
1100 | 1102 | |
|
|
1101 | 1103 | if msgFlag: |
|
|
1102 | 1104 | print "[Reading] File %s can't be opened" % (filename) |
|
|
1103 | 1105 | |
|
|
1104 | 1106 | return False |
|
|
1105 | 1107 | |
|
|
1106 | 1108 | currentPosition = fp.tell() |
|
|
1107 | 1109 | neededSize = self.processingHeaderObj.blockSize + self.firstHeaderSize |
|
|
1108 | 1110 | |
|
|
1109 | 1111 | if neededSize == 0: |
|
|
1110 | 1112 | basicHeaderObj = BasicHeader(LOCALTIME) |
|
|
1111 | 1113 | systemHeaderObj = SystemHeader() |
|
|
1112 | 1114 | radarControllerHeaderObj = RadarControllerHeader() |
|
|
1113 | 1115 | processingHeaderObj = ProcessingHeader() |
|
|
1114 | 1116 | |
|
|
1115 | 1117 | if not( basicHeaderObj.read(fp) ): |
|
|
1116 | 1118 | fp.close() |
|
|
1117 | 1119 | return False |
|
|
1118 | 1120 | |
|
|
1119 | 1121 | if not( systemHeaderObj.read(fp) ): |
|
|
1120 | 1122 | fp.close() |
|
|
1121 | 1123 | return False |
|
|
1122 | 1124 | |
|
|
1123 | 1125 | if not( radarControllerHeaderObj.read(fp) ): |
|
|
1124 | 1126 | fp.close() |
|
|
1125 | 1127 | return False |
|
|
1126 | 1128 | |
|
|
1127 | 1129 | if not( processingHeaderObj.read(fp) ): |
|
|
1128 | 1130 | fp.close() |
|
|
1129 | 1131 | return False |
|
|
1130 | 1132 | |
|
|
1131 | 1133 | neededSize = processingHeaderObj.blockSize + basicHeaderObj.size |
|
|
1132 | 1134 | else: |
|
|
1133 | 1135 | msg = "[Reading] Skipping the file %s due to it hasn't enough data" %filename |
|
|
1134 | 1136 | |
|
|
1135 | 1137 | fp.close() |
|
|
1136 | 1138 | |
|
|
1137 | 1139 | fileSize = os.path.getsize(filename) |
|
|
1138 | 1140 | currentSize = fileSize - currentPosition |
|
|
1139 | 1141 | |
|
|
1140 | 1142 | if currentSize < neededSize: |
|
|
1141 | 1143 | if msgFlag and (msg != None): |
|
|
1142 | 1144 | print msg |
|
|
1143 | 1145 | return False |
|
|
1144 | 1146 | |
|
|
1145 | 1147 | return True |
|
|
1146 | 1148 | |
|
|
1147 | 1149 | def findDatafiles(self, path, startDate=None, endDate=None, expLabel='', ext='.r', walk=True, include_path=False): |
|
|
1148 | 1150 | |
|
|
1149 | 1151 | path_empty = True |
|
|
1150 | 1152 | |
|
|
1151 | 1153 | dateList = [] |
|
|
1152 | 1154 | pathList = [] |
|
|
1153 | 1155 | |
|
|
1154 | 1156 | multi_path = path.split(',') |
|
|
1155 | 1157 | |
|
|
1156 | 1158 | if not walk: |
|
|
1157 | 1159 | |
|
|
1158 | 1160 | for single_path in multi_path: |
|
|
1159 | 1161 | |
|
|
1160 | 1162 | if not os.path.isdir(single_path): |
|
|
1161 | 1163 | continue |
|
|
1162 | 1164 | |
|
|
1163 | 1165 | fileList = glob.glob1(single_path, "*"+ext) |
|
|
1164 | 1166 | |
|
|
1165 | 1167 | if not fileList: |
|
|
1166 | 1168 | continue |
|
|
1167 | 1169 | |
|
|
1168 | 1170 | path_empty = False |
|
|
1169 | 1171 | |
|
|
1170 | 1172 | fileList.sort() |
|
|
1171 | 1173 | |
|
|
1172 | 1174 | for thisFile in fileList: |
|
|
1173 | 1175 | |
|
|
1174 | 1176 | if not os.path.isfile(os.path.join(single_path, thisFile)): |
|
|
1175 | 1177 | continue |
|
|
1176 | 1178 | |
|
|
1177 | 1179 | if not isRadarFile(thisFile): |
|
|
1178 | 1180 | continue |
|
|
1179 | 1181 | |
|
|
1180 | 1182 | if not isFileInDateRange(thisFile, startDate, endDate): |
|
|
1181 | 1183 | continue |
|
|
1182 | 1184 | |
|
|
1183 | 1185 | thisDate = getDateFromRadarFile(thisFile) |
|
|
1184 | 1186 | |
|
|
1185 | 1187 | if thisDate in dateList: |
|
|
1186 | 1188 | continue |
|
|
1187 | 1189 | |
|
|
1188 | 1190 | dateList.append(thisDate) |
|
|
1189 | 1191 | pathList.append(single_path) |
|
|
1190 | 1192 | |
|
|
1191 | 1193 | else: |
|
|
1192 | 1194 | for single_path in multi_path: |
|
|
1193 | 1195 | |
|
|
1194 | 1196 | if not os.path.isdir(single_path): |
|
|
1195 | 1197 | continue |
|
|
1196 | 1198 | |
|
|
1197 | 1199 | dirList = [] |
|
|
1198 | 1200 | |
|
|
1199 | 1201 | for thisPath in os.listdir(single_path): |
|
|
1200 | 1202 | |
|
|
1201 | 1203 | if not os.path.isdir(os.path.join(single_path,thisPath)): |
|
|
1202 | 1204 | continue |
|
|
1203 | 1205 | |
|
|
1204 | 1206 | if not isRadarFolder(thisPath): |
|
|
1205 | 1207 | continue |
|
|
1206 | 1208 | |
|
|
1207 | 1209 | if not isFolderInDateRange(thisPath, startDate, endDate): |
|
|
1208 | 1210 | continue |
|
|
1209 | 1211 | |
|
|
1210 | 1212 | dirList.append(thisPath) |
|
|
1211 | 1213 | |
|
|
1212 | 1214 | if not dirList: |
|
|
1213 | 1215 | continue |
|
|
1214 | 1216 | |
|
|
1215 | 1217 | dirList.sort() |
|
|
1216 | 1218 | |
|
|
1217 | 1219 | for thisDir in dirList: |
|
|
1218 | 1220 | |
|
|
1219 | 1221 | datapath = os.path.join(single_path, thisDir, expLabel) |
|
|
1220 | 1222 | fileList = glob.glob1(datapath, "*"+ext) |
|
|
1221 | 1223 | |
|
|
1222 | 1224 | if not fileList: |
|
|
1223 | 1225 | continue |
|
|
1224 | 1226 | |
|
|
1225 | 1227 | path_empty = False |
|
|
1226 | 1228 | |
|
|
1227 | 1229 | thisDate = getDateFromRadarFolder(thisDir) |
|
|
1228 | 1230 | |
|
|
1229 | 1231 | pathList.append(datapath) |
|
|
1230 | 1232 | dateList.append(thisDate) |
|
|
1231 | 1233 | |
|
|
1232 | 1234 | dateList.sort() |
|
|
1233 | 1235 | |
|
|
1234 | 1236 | if walk: |
|
|
1235 | 1237 | pattern_path = os.path.join(multi_path[0], "[dYYYYDDD]", expLabel) |
|
|
1236 | 1238 | else: |
|
|
1237 | 1239 | pattern_path = multi_path[0] |
|
|
1238 | 1240 | |
|
|
1239 | 1241 | if path_empty: |
|
|
1240 | 1242 | print "[Reading] No *%s files in %s for %s to %s" %(ext, pattern_path, startDate, endDate) |
|
|
1241 | 1243 | else: |
|
|
1242 | 1244 | if not dateList: |
|
|
1243 | 1245 | print "[Reading] Date range selected invalid [%s - %s]: No *%s files in %s)" %(startDate, endDate, ext, path) |
|
|
1244 | 1246 | |
|
|
1245 | 1247 | if include_path: |
|
|
1246 | 1248 | return dateList, pathList |
|
|
1247 | 1249 | |
|
|
1248 | 1250 | return dateList |
|
|
1249 | 1251 | |
|
|
1250 | 1252 | def setup(self, |
|
|
1251 | 1253 | path=None, |
|
|
1252 | 1254 | startDate=None, |
|
|
1253 | 1255 | endDate=None, |
|
|
1254 | 1256 | startTime=datetime.time(0,0,0), |
|
|
1255 | 1257 | endTime=datetime.time(23,59,59), |
|
|
1256 | 1258 | set=None, |
|
|
1257 | 1259 | expLabel = "", |
|
|
1258 | 1260 | ext = None, |
|
|
1259 | 1261 | online = False, |
|
|
1260 | 1262 | delay = 60, |
|
|
1261 | 1263 | walk = True, |
|
|
1262 | 1264 | getblock = False, |
|
|
1263 | 1265 | nTxs = 1, |
|
|
1264 | 1266 | realtime=False, |
|
|
1265 | 1267 | blocksize=None, |
|
|
1266 | 1268 | blocktime=None, |
|
|
1267 | 1269 | queue=None, |
|
|
1268 | 1270 | skip=None, |
|
|
1269 |
cursor=None |
|
|
|
1271 | cursor=None, | |
|
|
1272 | warnings=True, | |
|
|
1273 | verbose=True): | |
|
|
1270 | 1274 | |
|
|
1271 | 1275 | if path == None: |
|
|
1272 | 1276 | raise ValueError, "[Reading] The path is not valid" |
|
|
1273 | 1277 | |
|
|
1274 | 1278 | if ext == None: |
|
|
1275 | 1279 | ext = self.ext |
|
|
1276 | 1280 | |
|
|
1277 | 1281 | if online: |
|
|
1278 | 1282 | print "[Reading] Searching files in online mode..." |
|
|
1279 | 1283 | |
|
|
1280 | 1284 | for nTries in range( self.nTries ): |
|
|
1281 | 1285 | fullpath, foldercounter, file, year, doy, set = self.__searchFilesOnLine(path=path, expLabel=expLabel, ext=ext, walk=walk, set=set) |
|
|
1282 | 1286 | |
|
|
1283 | 1287 | if fullpath: |
|
|
1284 | 1288 | break |
|
|
1285 | 1289 | |
|
|
1286 | 1290 | print '[Reading] Waiting %0.2f sec for an valid file in %s: try %02d ...' % (self.delay, path, nTries+1) |
|
|
1287 | 1291 | sleep( self.delay ) |
|
|
1288 | 1292 | |
|
|
1289 | 1293 | if not(fullpath): |
|
|
1290 | 1294 | print "[Reading] There 'isn't any valid file in %s" % path |
|
|
1291 | 1295 | return |
|
|
1292 | 1296 | |
|
|
1293 | 1297 | self.year = year |
|
|
1294 | 1298 | self.doy = doy |
|
|
1295 | 1299 | self.set = set - 1 |
|
|
1296 | 1300 | self.path = path |
|
|
1297 | 1301 | self.foldercounter = foldercounter |
|
|
1298 | 1302 | last_set = None |
|
|
1299 | 1303 | |
|
|
1300 | 1304 | else: |
|
|
1301 | 1305 | print "[Reading] Searching files in offline mode ..." |
|
|
1302 | 1306 | pathList, filenameList = self.__searchFilesOffLine(path, startDate=startDate, endDate=endDate, |
|
|
1303 | 1307 | startTime=startTime, endTime=endTime, |
|
|
1304 | 1308 | set=set, expLabel=expLabel, ext=ext, |
|
|
1305 | 1309 | walk=walk, cursor=cursor, |
|
|
1306 | 1310 | skip=skip, queue=queue) |
|
|
1307 | 1311 | |
|
|
1308 | 1312 | if not(pathList): |
|
|
1309 | 1313 | # print "[Reading] No *%s files in %s (%s - %s)"%(ext, path, |
|
|
1310 | 1314 | # datetime.datetime.combine(startDate,startTime).ctime(), |
|
|
1311 | 1315 | # datetime.datetime.combine(endDate,endTime).ctime()) |
|
|
1312 | 1316 | |
|
|
1313 | 1317 | # sys.exit(-1) |
|
|
1314 | 1318 | |
|
|
1315 | 1319 | self.fileIndex = -1 |
|
|
1316 | 1320 | self.pathList = [] |
|
|
1317 | 1321 | self.filenameList = [] |
|
|
1318 | 1322 | return |
|
|
1319 | 1323 | |
|
|
1320 | 1324 | self.fileIndex = -1 |
|
|
1321 | 1325 | self.pathList = pathList |
|
|
1322 | 1326 | self.filenameList = filenameList |
|
|
1323 | 1327 | file_name = os.path.basename(filenameList[-1]) |
|
|
1324 | 1328 | basename, ext = os.path.splitext(file_name) |
|
|
1325 | 1329 | last_set = int(basename[-3:]) |
|
|
1326 | 1330 | |
|
|
1327 | 1331 | self.online = online |
|
|
1328 | 1332 | self.realtime = realtime |
|
|
1329 | 1333 | self.delay = delay |
|
|
1330 | 1334 | ext = ext.lower() |
|
|
1331 | 1335 | self.ext = ext |
|
|
1332 | 1336 | self.getByBlock = getblock |
|
|
1333 | 1337 | self.nTxs = nTxs |
|
|
1334 | 1338 | self.startTime = startTime |
|
|
1335 | 1339 | self.endTime = endTime |
|
|
1336 | 1340 | |
|
|
1337 | 1341 | #Added----------------- |
|
|
1338 | 1342 | self.selBlocksize = blocksize |
|
|
1339 | 1343 | self.selBlocktime = blocktime |
|
|
1340 | 1344 | |
|
|
1345 | # Verbose----------- | |
|
|
1346 | self.verbose = verbose | |
|
|
1347 | self.warnings = warnings | |
|
|
1341 | 1348 | |
|
|
1342 | 1349 | if not(self.setNextFile()): |
|
|
1343 | 1350 | if (startDate!=None) and (endDate!=None): |
|
|
1344 | 1351 | print "[Reading] No files in range: %s - %s" %(datetime.datetime.combine(startDate,startTime).ctime(), datetime.datetime.combine(endDate,endTime).ctime()) |
|
|
1345 | 1352 | elif startDate != None: |
|
|
1346 | 1353 | print "[Reading] No files in range: %s" %(datetime.datetime.combine(startDate,startTime).ctime()) |
|
|
1347 | 1354 | else: |
|
|
1348 | 1355 | print "[Reading] No files" |
|
|
1349 | 1356 | |
|
|
1350 | 1357 | self.fileIndex = -1 |
|
|
1351 | 1358 | self.pathList = [] |
|
|
1352 | 1359 | self.filenameList = [] |
|
|
1353 | 1360 | return |
|
|
1354 | 1361 | |
|
|
1355 | 1362 | # self.getBasicHeader() |
|
|
1356 | 1363 | |
|
|
1357 | 1364 | if last_set != None: |
|
|
1358 | 1365 | self.dataOut.last_block = last_set * self.processingHeaderObj.dataBlocksPerFile + self.basicHeaderObj.dataBlock |
|
|
1359 | 1366 | return |
|
|
1360 | 1367 | |
|
|
1361 | 1368 | def getBasicHeader(self): |
|
|
1362 | 1369 | |
|
|
1363 | 1370 | self.dataOut.utctime = self.basicHeaderObj.utc + self.basicHeaderObj.miliSecond/1000. + self.profileIndex * self.radarControllerHeaderObj.ippSeconds |
|
|
1364 | 1371 | |
|
|
1365 | 1372 | self.dataOut.flagDiscontinuousBlock = self.flagDiscontinuousBlock |
|
|
1366 | 1373 | |
|
|
1367 | 1374 | self.dataOut.timeZone = self.basicHeaderObj.timeZone |
|
|
1368 | 1375 | |
|
|
1369 | 1376 | self.dataOut.dstFlag = self.basicHeaderObj.dstFlag |
|
|
1370 | 1377 | |
|
|
1371 | 1378 | self.dataOut.errorCount = self.basicHeaderObj.errorCount |
|
|
1372 | 1379 | |
|
|
1373 | 1380 | self.dataOut.useLocalTime = self.basicHeaderObj.useLocalTime |
|
|
1374 | 1381 | |
|
|
1375 | 1382 | self.dataOut.ippSeconds = self.radarControllerHeaderObj.ippSeconds/self.nTxs |
|
|
1376 | 1383 | |
|
|
1377 | 1384 | # self.dataOut.nProfiles = self.processingHeaderObj.profilesPerBlock*self.nTxs |
|
|
1378 | 1385 | |
|
|
1379 | 1386 | |
|
|
1380 | 1387 | def getFirstHeader(self): |
|
|
1381 | 1388 | |
|
|
1382 | 1389 | raise NotImplementedError |
|
|
1383 | 1390 | |
|
|
1384 | 1391 | def getData(self): |
|
|
1385 | 1392 | |
|
|
1386 | 1393 | raise NotImplementedError |
|
|
1387 | 1394 | |
|
|
1388 | 1395 | def hasNotDataInBuffer(self): |
|
|
1389 | 1396 | |
|
|
1390 | 1397 | raise NotImplementedError |
|
|
1391 | 1398 | |
|
|
1392 | 1399 | def readBlock(self): |
|
|
1393 | 1400 | |
|
|
1394 | 1401 | raise NotImplementedError |
|
|
1395 | 1402 | |
|
|
1396 | 1403 | def isEndProcess(self): |
|
|
1397 | 1404 | |
|
|
1398 | 1405 | return self.flagNoMoreFiles |
|
|
1399 | 1406 | |
|
|
1400 | 1407 | def printReadBlocks(self): |
|
|
1401 | 1408 | |
|
|
1402 | 1409 | print "[Reading] Number of read blocks per file %04d" %self.nReadBlocks |
|
|
1403 | 1410 | |
|
|
1404 | 1411 | def printTotalBlocks(self): |
|
|
1405 | 1412 | |
|
|
1406 | 1413 | print "[Reading] Number of read blocks %04d" %self.nTotalBlocks |
|
|
1407 | 1414 | |
|
|
1408 | 1415 | def printNumberOfBlock(self): |
|
|
1409 | 1416 | |
|
|
1410 | 1417 | if self.flagIsNewBlock: |
|
|
1411 | 1418 | print "[Reading] Block No. %d/%d -> %s" %(self.nReadBlocks, |
|
|
1412 | 1419 | self.processingHeaderObj.dataBlocksPerFile, |
|
|
1413 | 1420 | self.dataOut.datatime.ctime()) |
|
|
1414 | 1421 | |
|
|
1415 | 1422 | def printInfo(self): |
|
|
1416 | 1423 | |
|
|
1417 | 1424 | if self.__printInfo == False: |
|
|
1418 | 1425 | return |
|
|
1419 | 1426 | |
|
|
1420 | 1427 | self.basicHeaderObj.printInfo() |
|
|
1421 | 1428 | self.systemHeaderObj.printInfo() |
|
|
1422 | 1429 | self.radarControllerHeaderObj.printInfo() |
|
|
1423 | 1430 | self.processingHeaderObj.printInfo() |
|
|
1424 | 1431 | |
|
|
1425 | 1432 | self.__printInfo = False |
|
|
1426 | 1433 | |
|
|
1427 | 1434 | |
|
|
1428 | 1435 | def run(self, **kwargs): |
|
|
1429 | 1436 | |
|
|
1430 | 1437 | if not(self.isConfig): |
|
|
1431 | 1438 | |
|
|
1432 | 1439 | # self.dataOut = dataOut |
|
|
1433 | 1440 | self.setup(**kwargs) |
|
|
1434 | 1441 | self.isConfig = True |
|
|
1435 | 1442 | |
|
|
1436 | 1443 | self.getData() |
|
|
1437 | 1444 | |
|
|
1438 | 1445 | class JRODataWriter(JRODataIO): |
|
|
1439 | 1446 | |
|
|
1440 | 1447 | """ |
|
|
1441 | 1448 | Esta clase permite escribir datos a archivos procesados (.r o ,pdata). La escritura |
|
|
1442 | 1449 | de los datos siempre se realiza por bloques. |
|
|
1443 | 1450 | """ |
|
|
1444 | 1451 | |
|
|
1445 | 1452 | blockIndex = 0 |
|
|
1446 | 1453 | |
|
|
1447 | 1454 | path = None |
|
|
1448 | 1455 | |
|
|
1449 | 1456 | setFile = None |
|
|
1450 | 1457 | |
|
|
1451 | 1458 | profilesPerBlock = None |
|
|
1452 | 1459 | |
|
|
1453 | 1460 | blocksPerFile = None |
|
|
1454 | 1461 | |
|
|
1455 | 1462 | nWriteBlocks = 0 |
|
|
1456 | 1463 | |
|
|
1457 | 1464 | fileDate = None |
|
|
1458 | 1465 | |
|
|
1459 | 1466 | def __init__(self, dataOut=None): |
|
|
1460 | 1467 | raise NotImplementedError |
|
|
1461 | 1468 | |
|
|
1462 | 1469 | |
|
|
1463 | 1470 | def hasAllDataInBuffer(self): |
|
|
1464 | 1471 | raise NotImplementedError |
|
|
1465 | 1472 | |
|
|
1466 | 1473 | |
|
|
1467 | 1474 | def setBlockDimension(self): |
|
|
1468 | 1475 | raise NotImplementedError |
|
|
1469 | 1476 | |
|
|
1470 | 1477 | |
|
|
1471 | 1478 | def writeBlock(self): |
|
|
1472 | 1479 | raise NotImplementedError |
|
|
1473 | 1480 | |
|
|
1474 | 1481 | |
|
|
1475 | 1482 | def putData(self): |
|
|
1476 | 1483 | raise NotImplementedError |
|
|
1477 | 1484 | |
|
|
1478 | 1485 | |
|
|
1479 | 1486 | def getProcessFlags(self): |
|
|
1480 | 1487 | |
|
|
1481 | 1488 | processFlags = 0 |
|
|
1482 | 1489 | |
|
|
1483 | 1490 | dtype_index = get_dtype_index(self.dtype) |
|
|
1484 | 1491 | procflag_dtype = get_procflag_dtype(dtype_index) |
|
|
1485 | 1492 | |
|
|
1486 | 1493 | processFlags += procflag_dtype |
|
|
1487 | 1494 | |
|
|
1488 | 1495 | if self.dataOut.flagDecodeData: |
|
|
1489 | 1496 | processFlags += PROCFLAG.DECODE_DATA |
|
|
1490 | 1497 | |
|
|
1491 | 1498 | if self.dataOut.flagDeflipData: |
|
|
1492 | 1499 | processFlags += PROCFLAG.DEFLIP_DATA |
|
|
1493 | 1500 | |
|
|
1494 | 1501 | if self.dataOut.code is not None: |
|
|
1495 | 1502 | processFlags += PROCFLAG.DEFINE_PROCESS_CODE |
|
|
1496 | 1503 | |
|
|
1497 | 1504 | if self.dataOut.nCohInt > 1: |
|
|
1498 | 1505 | processFlags += PROCFLAG.COHERENT_INTEGRATION |
|
|
1499 | 1506 | |
|
|
1500 | 1507 | if self.dataOut.type == "Spectra": |
|
|
1501 | 1508 | if self.dataOut.nIncohInt > 1: |
|
|
1502 | 1509 | processFlags += PROCFLAG.INCOHERENT_INTEGRATION |
|
|
1503 | 1510 | |
|
|
1504 | 1511 | if self.dataOut.data_dc is not None: |
|
|
1505 | 1512 | processFlags += PROCFLAG.SAVE_CHANNELS_DC |
|
|
1506 | 1513 | |
|
|
1507 | 1514 | if self.dataOut.flagShiftFFT: |
|
|
1508 | 1515 | processFlags += PROCFLAG.SHIFT_FFT_DATA |
|
|
1509 | 1516 | |
|
|
1510 | 1517 | return processFlags |
|
|
1511 | 1518 | |
|
|
1512 | 1519 | def setBasicHeader(self): |
|
|
1513 | 1520 | |
|
|
1514 | 1521 | self.basicHeaderObj.size = self.basicHeaderSize #bytes |
|
|
1515 | 1522 | self.basicHeaderObj.version = self.versionFile |
|
|
1516 | 1523 | self.basicHeaderObj.dataBlock = self.nTotalBlocks |
|
|
1517 | 1524 | |
|
|
1518 | 1525 | utc = numpy.floor(self.dataOut.utctime) |
|
|
1519 | 1526 | milisecond = (self.dataOut.utctime - utc)* 1000.0 |
|
|
1520 | 1527 | |
|
|
1521 | 1528 | self.basicHeaderObj.utc = utc |
|
|
1522 | 1529 | self.basicHeaderObj.miliSecond = milisecond |
|
|
1523 | 1530 | self.basicHeaderObj.timeZone = self.dataOut.timeZone |
|
|
1524 | 1531 | self.basicHeaderObj.dstFlag = self.dataOut.dstFlag |
|
|
1525 | 1532 | self.basicHeaderObj.errorCount = self.dataOut.errorCount |
|
|
1526 | 1533 | |
|
|
1527 | 1534 | def setFirstHeader(self): |
|
|
1528 | 1535 | """ |
|
|
1529 | 1536 | Obtiene una copia del First Header |
|
|
1530 | 1537 | |
|
|
1531 | 1538 | Affected: |
|
|
1532 | 1539 | |
|
|
1533 | 1540 | self.basicHeaderObj |
|
|
1534 | 1541 | self.systemHeaderObj |
|
|
1535 | 1542 | self.radarControllerHeaderObj |
|
|
1536 | 1543 | self.processingHeaderObj self. |
|
|
1537 | 1544 | |
|
|
1538 | 1545 | Return: |
|
|
1539 | 1546 | None |
|
|
1540 | 1547 | """ |
|
|
1541 | 1548 | |
|
|
1542 | 1549 | raise NotImplementedError |
|
|
1543 | 1550 | |
|
|
1544 | 1551 | def __writeFirstHeader(self): |
|
|
1545 | 1552 | """ |
|
|
1546 | 1553 | Escribe el primer header del file es decir el Basic header y el Long header (SystemHeader, RadarControllerHeader, ProcessingHeader) |
|
|
1547 | 1554 | |
|
|
1548 | 1555 | Affected: |
|
|
1549 | 1556 | __dataType |
|
|
1550 | 1557 | |
|
|
1551 | 1558 | Return: |
|
|
1552 | 1559 | None |
|
|
1553 | 1560 | """ |
|
|
1554 | 1561 | |
|
|
1555 | 1562 | # CALCULAR PARAMETROS |
|
|
1556 | 1563 | |
|
|
1557 | 1564 | sizeLongHeader = self.systemHeaderObj.size + self.radarControllerHeaderObj.size + self.processingHeaderObj.size |
|
|
1558 | 1565 | self.basicHeaderObj.size = self.basicHeaderSize + sizeLongHeader |
|
|
1559 | 1566 | |
|
|
1560 | 1567 | self.basicHeaderObj.write(self.fp) |
|
|
1561 | 1568 | self.systemHeaderObj.write(self.fp) |
|
|
1562 | 1569 | self.radarControllerHeaderObj.write(self.fp) |
|
|
1563 | 1570 | self.processingHeaderObj.write(self.fp) |
|
|
1564 | 1571 | |
|
|
1565 | 1572 | def __setNewBlock(self): |
|
|
1566 | 1573 | """ |
|
|
1567 | 1574 | Si es un nuevo file escribe el First Header caso contrario escribe solo el Basic Header |
|
|
1568 | 1575 | |
|
|
1569 | 1576 | Return: |
|
|
1570 | 1577 | 0 : si no pudo escribir nada |
|
|
1571 | 1578 | 1 : Si escribio el Basic el First Header |
|
|
1572 | 1579 | """ |
|
|
1573 | 1580 | if self.fp == None: |
|
|
1574 | 1581 | self.setNextFile() |
|
|
1575 | 1582 | |
|
|
1576 | 1583 | if self.flagIsNewFile: |
|
|
1577 | 1584 | return 1 |
|
|
1578 | 1585 | |
|
|
1579 | 1586 | if self.blockIndex < self.processingHeaderObj.dataBlocksPerFile: |
|
|
1580 | 1587 | self.basicHeaderObj.write(self.fp) |
|
|
1581 | 1588 | return 1 |
|
|
1582 | 1589 | |
|
|
1583 | 1590 | if not( self.setNextFile() ): |
|
|
1584 | 1591 | return 0 |
|
|
1585 | 1592 | |
|
|
1586 | 1593 | return 1 |
|
|
1587 | 1594 | |
|
|
1588 | 1595 | |
|
|
1589 | 1596 | def writeNextBlock(self): |
|
|
1590 | 1597 | """ |
|
|
1591 | 1598 | Selecciona el bloque siguiente de datos y los escribe en un file |
|
|
1592 | 1599 | |
|
|
1593 | 1600 | Return: |
|
|
1594 | 1601 | 0 : Si no hizo pudo escribir el bloque de datos |
|
|
1595 | 1602 | 1 : Si no pudo escribir el bloque de datos |
|
|
1596 | 1603 | """ |
|
|
1597 | 1604 | if not( self.__setNewBlock() ): |
|
|
1598 | 1605 | return 0 |
|
|
1599 | 1606 | |
|
|
1600 | 1607 | self.writeBlock() |
|
|
1601 | 1608 | |
|
|
1602 | 1609 | print "[Writing] Block No. %d/%d" %(self.blockIndex, |
|
|
1603 | 1610 | self.processingHeaderObj.dataBlocksPerFile) |
|
|
1604 | 1611 | |
|
|
1605 | 1612 | return 1 |
|
|
1606 | 1613 | |
|
|
1607 | 1614 | def setNextFile(self): |
|
|
1608 | 1615 | """ |
|
|
1609 | 1616 | Determina el siguiente file que sera escrito |
|
|
1610 | 1617 | |
|
|
1611 | 1618 | Affected: |
|
|
1612 | 1619 | self.filename |
|
|
1613 | 1620 | self.subfolder |
|
|
1614 | 1621 | self.fp |
|
|
1615 | 1622 | self.setFile |
|
|
1616 | 1623 | self.flagIsNewFile |
|
|
1617 | 1624 | |
|
|
1618 | 1625 | Return: |
|
|
1619 | 1626 | 0 : Si el archivo no puede ser escrito |
|
|
1620 | 1627 | 1 : Si el archivo esta listo para ser escrito |
|
|
1621 | 1628 | """ |
|
|
1622 | 1629 | ext = self.ext |
|
|
1623 | 1630 | path = self.path |
|
|
1624 | 1631 | |
|
|
1625 | 1632 | if self.fp != None: |
|
|
1626 | 1633 | self.fp.close() |
|
|
1627 | 1634 | |
|
|
1628 | 1635 | timeTuple = time.localtime( self.dataOut.utctime) |
|
|
1629 | 1636 | subfolder = 'd%4.4d%3.3d' % (timeTuple.tm_year,timeTuple.tm_yday) |
|
|
1630 | 1637 | |
|
|
1631 | 1638 | fullpath = os.path.join( path, subfolder ) |
|
|
1632 | 1639 | setFile = self.setFile |
|
|
1633 | 1640 | |
|
|
1634 | 1641 | if not( os.path.exists(fullpath) ): |
|
|
1635 | 1642 | os.mkdir(fullpath) |
|
|
1636 | 1643 | setFile = -1 #inicializo mi contador de seteo |
|
|
1637 | 1644 | else: |
|
|
1638 | 1645 | filesList = os.listdir( fullpath ) |
|
|
1639 | 1646 | if len( filesList ) > 0: |
|
|
1640 | 1647 | filesList = sorted( filesList, key=str.lower ) |
|
|
1641 | 1648 | filen = filesList[-1] |
|
|
1642 | 1649 | # el filename debera tener el siguiente formato |
|
|
1643 | 1650 | # 0 1234 567 89A BCDE (hex) |
|
|
1644 | 1651 | # x YYYY DDD SSS .ext |
|
|
1645 | 1652 | if isNumber( filen[8:11] ): |
|
|
1646 | 1653 | setFile = int( filen[8:11] ) #inicializo mi contador de seteo al seteo del ultimo file |
|
|
1647 | 1654 | else: |
|
|
1648 | 1655 | setFile = -1 |
|
|
1649 | 1656 | else: |
|
|
1650 | 1657 | setFile = -1 #inicializo mi contador de seteo |
|
|
1651 | 1658 | |
|
|
1652 | 1659 | setFile += 1 |
|
|
1653 | 1660 | |
|
|
1654 | 1661 | #If this is a new day it resets some values |
|
|
1655 | 1662 | if self.dataOut.datatime.date() > self.fileDate: |
|
|
1656 | 1663 | setFile = 0 |
|
|
1657 | 1664 | self.nTotalBlocks = 0 |
|
|
1658 | 1665 | |
|
|
1659 | 1666 | filen = '%s%4.4d%3.3d%3.3d%s' % (self.optchar, timeTuple.tm_year, timeTuple.tm_yday, setFile, ext ) |
|
|
1660 | 1667 | |
|
|
1661 | 1668 | filename = os.path.join( path, subfolder, filen ) |
|
|
1662 | 1669 | |
|
|
1663 | 1670 | fp = open( filename,'wb' ) |
|
|
1664 | 1671 | |
|
|
1665 | 1672 | self.blockIndex = 0 |
|
|
1666 | 1673 | |
|
|
1667 | 1674 | #guardando atributos |
|
|
1668 | 1675 | self.filename = filename |
|
|
1669 | 1676 | self.subfolder = subfolder |
|
|
1670 | 1677 | self.fp = fp |
|
|
1671 | 1678 | self.setFile = setFile |
|
|
1672 | 1679 | self.flagIsNewFile = 1 |
|
|
1673 | 1680 | self.fileDate = self.dataOut.datatime.date() |
|
|
1674 | 1681 | |
|
|
1675 | 1682 | self.setFirstHeader() |
|
|
1676 | 1683 | |
|
|
1677 | 1684 | print '[Writing] Opening file: %s'%self.filename |
|
|
1678 | 1685 | |
|
|
1679 | 1686 | self.__writeFirstHeader() |
|
|
1680 | 1687 | |
|
|
1681 | 1688 | return 1 |
|
|
1682 | 1689 | |
|
|
1683 | 1690 | def setup(self, dataOut, path, blocksPerFile, profilesPerBlock=64, set=None, ext=None, datatype=4): |
|
|
1684 | 1691 | """ |
|
|
1685 | 1692 | Setea el tipo de formato en la cual sera guardada la data y escribe el First Header |
|
|
1686 | 1693 | |
|
|
1687 | 1694 | Inputs: |
|
|
1688 | 1695 | path : directory where data will be saved |
|
|
1689 | 1696 | profilesPerBlock : number of profiles per block |
|
|
1690 | 1697 | set : initial file set |
|
|
1691 | 1698 | datatype : An integer number that defines data type: |
|
|
1692 | 1699 | 0 : int8 (1 byte) |
|
|
1693 | 1700 | 1 : int16 (2 bytes) |
|
|
1694 | 1701 | 2 : int32 (4 bytes) |
|
|
1695 | 1702 | 3 : int64 (8 bytes) |
|
|
1696 | 1703 | 4 : float32 (4 bytes) |
|
|
1697 | 1704 | 5 : double64 (8 bytes) |
|
|
1698 | 1705 | |
|
|
1699 | 1706 | Return: |
|
|
1700 | 1707 | 0 : Si no realizo un buen seteo |
|
|
1701 | 1708 | 1 : Si realizo un buen seteo |
|
|
1702 | 1709 | """ |
|
|
1703 | 1710 | |
|
|
1704 | 1711 | if ext == None: |
|
|
1705 | 1712 | ext = self.ext |
|
|
1706 | 1713 | |
|
|
1707 | 1714 | self.ext = ext.lower() |
|
|
1708 | 1715 | |
|
|
1709 | 1716 | self.path = path |
|
|
1710 | 1717 | |
|
|
1711 | 1718 | if set is None: |
|
|
1712 | 1719 | self.setFile = -1 |
|
|
1713 | 1720 | else: |
|
|
1714 | 1721 | self.setFile = set - 1 |
|
|
1715 | 1722 | |
|
|
1716 | 1723 | self.blocksPerFile = blocksPerFile |
|
|
1717 | 1724 | |
|
|
1718 | 1725 | self.profilesPerBlock = profilesPerBlock |
|
|
1719 | 1726 | |
|
|
1720 | 1727 | self.dataOut = dataOut |
|
|
1721 | 1728 | self.fileDate = self.dataOut.datatime.date() |
|
|
1722 | 1729 | #By default |
|
|
1723 | 1730 | self.dtype = self.dataOut.dtype |
|
|
1724 | 1731 | |
|
|
1725 | 1732 | if datatype is not None: |
|
|
1726 | 1733 | self.dtype = get_numpy_dtype(datatype) |
|
|
1727 | 1734 | |
|
|
1728 | 1735 | if not(self.setNextFile()): |
|
|
1729 | 1736 | print "[Writing] There isn't a next file" |
|
|
1730 | 1737 | return 0 |
|
|
1731 | 1738 | |
|
|
1732 | 1739 | self.setBlockDimension() |
|
|
1733 | 1740 | |
|
|
1734 | 1741 | return 1 |
|
|
1735 | 1742 | |
|
|
1736 | 1743 | def run(self, dataOut, **kwargs): |
|
|
1737 | 1744 | |
|
|
1738 | 1745 | if not(self.isConfig): |
|
|
1739 | 1746 | |
|
|
1740 | 1747 | self.setup(dataOut, **kwargs) |
|
|
1741 | 1748 | self.isConfig = True |
|
|
1742 | 1749 | |
|
|
1743 | 1750 | self.putData() |
| @@ -1,346 +1,346 | |||
|
|
1 | 1 | ''' |
|
|
2 | 2 | |
|
|
3 | 3 | $Author: murco $ |
|
|
4 | 4 | $Id: jroproc_base.py 1 2012-11-12 18:56:07Z murco $ |
|
|
5 | 5 | ''' |
|
|
6 | 6 | import inspect |
|
|
7 | 7 | from fuzzywuzzy import process |
|
|
8 | 8 | |
|
|
9 | 9 | def checkKwargs(method, kwargs): |
|
|
10 | 10 | currentKwargs = kwargs |
|
|
11 | 11 | choices = inspect.getargspec(method).args |
|
|
12 | 12 | try: |
|
|
13 | 13 | choices.remove('self') |
|
|
14 | 14 | except Exception as e: |
|
|
15 | 15 | pass |
|
|
16 | 16 | |
|
|
17 | 17 | try: |
|
|
18 | 18 | choices.remove('dataOut') |
|
|
19 | 19 | except Exception as e: |
|
|
20 | 20 | pass |
|
|
21 | 21 | |
|
|
22 | 22 | for kwarg in kwargs: |
|
|
23 | 23 | fuzz = process.extractOne(kwarg, choices) |
|
|
24 | 24 | if fuzz is None: |
|
|
25 | 25 | continue |
|
|
26 | 26 | if fuzz[1] < 100: |
|
|
27 |
raise Exception('\x1b[ |
|
|
|
27 | raise Exception('\x1b[0;32;40mDid you mean {} instead of {} in {}? \x1b[0m'. | |
|
|
28 | 28 | format(fuzz[0], kwarg, method.__self__.__class__.__name__)) |
|
|
29 | 29 | |
|
|
30 | 30 | class ProcessingUnit(object): |
|
|
31 | 31 | |
|
|
32 | 32 | """ |
|
|
33 | 33 | Esta es la clase base para el procesamiento de datos. |
|
|
34 | 34 | |
|
|
35 | 35 | Contiene el metodo "call" para llamar operaciones. Las operaciones pueden ser: |
|
|
36 | 36 | - Metodos internos (callMethod) |
|
|
37 | 37 | - Objetos del tipo Operation (callObject). Antes de ser llamados, estos objetos |
|
|
38 | 38 | tienen que ser agreagados con el metodo "add". |
|
|
39 | 39 | |
|
|
40 | 40 | """ |
|
|
41 | 41 | # objeto de datos de entrada (Voltage, Spectra o Correlation) |
|
|
42 | 42 | dataIn = None |
|
|
43 | 43 | dataInList = [] |
|
|
44 | 44 | |
|
|
45 | 45 | # objeto de datos de entrada (Voltage, Spectra o Correlation) |
|
|
46 | 46 | dataOut = None |
|
|
47 | 47 | |
|
|
48 | 48 | operations2RunDict = None |
|
|
49 | 49 | |
|
|
50 | 50 | isConfig = False |
|
|
51 | 51 | |
|
|
52 | 52 | |
|
|
53 | 53 | def __init__(self, *args, **kwargs): |
|
|
54 | 54 | |
|
|
55 | 55 | self.dataIn = None |
|
|
56 | 56 | self.dataInList = [] |
|
|
57 | 57 | |
|
|
58 | 58 | self.dataOut = None |
|
|
59 | 59 | |
|
|
60 | 60 | self.operations2RunDict = {} |
|
|
61 | 61 | self.operationKwargs = {} |
|
|
62 | 62 | |
|
|
63 | 63 | self.isConfig = False |
|
|
64 | 64 | |
|
|
65 | 65 | self.args = args |
|
|
66 | 66 | self.kwargs = kwargs |
|
|
67 | 67 | checkKwargs(self.run, kwargs) |
|
|
68 | 68 | |
|
|
69 | 69 | def getAllowedArgs(self): |
|
|
70 | 70 | return inspect.getargspec(self.run).args |
|
|
71 | 71 | |
|
|
72 | 72 | def addOperationKwargs(self, objId, **kwargs): |
|
|
73 | 73 | ''' |
|
|
74 | 74 | ''' |
|
|
75 | 75 | |
|
|
76 | 76 | self.operationKwargs[objId] = kwargs |
|
|
77 | 77 | |
|
|
78 | 78 | |
|
|
79 | 79 | def addOperation(self, opObj, objId): |
|
|
80 | 80 | |
|
|
81 | 81 | """ |
|
|
82 | 82 | Agrega un objeto del tipo "Operation" (opObj) a la lista de objetos "self.objectList" y retorna el |
|
|
83 | 83 | identificador asociado a este objeto. |
|
|
84 | 84 | |
|
|
85 | 85 | Input: |
|
|
86 | 86 | |
|
|
87 | 87 | object : objeto de la clase "Operation" |
|
|
88 | 88 | |
|
|
89 | 89 | Return: |
|
|
90 | 90 | |
|
|
91 | 91 | objId : identificador del objeto, necesario para ejecutar la operacion |
|
|
92 | 92 | """ |
|
|
93 | 93 | |
|
|
94 | 94 | self.operations2RunDict[objId] = opObj |
|
|
95 | 95 | |
|
|
96 | 96 | return objId |
|
|
97 | 97 | |
|
|
98 | 98 | def getOperationObj(self, objId): |
|
|
99 | 99 | |
|
|
100 | 100 | if objId not in self.operations2RunDict.keys(): |
|
|
101 | 101 | return None |
|
|
102 | 102 | |
|
|
103 | 103 | return self.operations2RunDict[objId] |
|
|
104 | 104 | |
|
|
105 | 105 | def operation(self, **kwargs): |
|
|
106 | 106 | |
|
|
107 | 107 | """ |
|
|
108 | 108 | Operacion directa sobre la data (dataOut.data). Es necesario actualizar los valores de los |
|
|
109 | 109 | atributos del objeto dataOut |
|
|
110 | 110 | |
|
|
111 | 111 | Input: |
|
|
112 | 112 | |
|
|
113 | 113 | **kwargs : Diccionario de argumentos de la funcion a ejecutar |
|
|
114 | 114 | """ |
|
|
115 | 115 | |
|
|
116 | 116 | raise NotImplementedError |
|
|
117 | 117 | |
|
|
118 | 118 | def callMethod(self, name, opId): |
|
|
119 | 119 | |
|
|
120 | 120 | """ |
|
|
121 | 121 | Ejecuta el metodo con el nombre "name" y con argumentos **kwargs de la propia clase. |
|
|
122 | 122 | |
|
|
123 | 123 | Input: |
|
|
124 | 124 | name : nombre del metodo a ejecutar |
|
|
125 | 125 | |
|
|
126 | 126 | **kwargs : diccionario con los nombres y valores de la funcion a ejecutar. |
|
|
127 | 127 | |
|
|
128 | 128 | """ |
|
|
129 | 129 | |
|
|
130 | 130 | #Checking the inputs |
|
|
131 | 131 | if name == 'run': |
|
|
132 | 132 | |
|
|
133 | 133 | if not self.checkInputs(): |
|
|
134 | 134 | self.dataOut.flagNoData = True |
|
|
135 | 135 | return False |
|
|
136 | 136 | else: |
|
|
137 | 137 | #Si no es un metodo RUN la entrada es la misma dataOut (interna) |
|
|
138 | 138 | if self.dataOut is not None and self.dataOut.isEmpty(): |
|
|
139 | 139 | return False |
|
|
140 | 140 | |
|
|
141 | 141 | #Getting the pointer to method |
|
|
142 | 142 | methodToCall = getattr(self, name) |
|
|
143 | 143 | |
|
|
144 | 144 | #Executing the self method |
|
|
145 | 145 | |
|
|
146 | 146 | if hasattr(self, 'mp'): |
|
|
147 | 147 | if name=='run': |
|
|
148 | 148 | if self.mp is False: |
|
|
149 | 149 | self.mp = True |
|
|
150 | 150 | self.start() |
|
|
151 | 151 | else: |
|
|
152 | 152 | methodToCall(**self.operationKwargs[opId]) |
|
|
153 | 153 | else: |
|
|
154 | 154 | if name=='run': |
|
|
155 | 155 | methodToCall(**self.kwargs) |
|
|
156 | 156 | else: |
|
|
157 | 157 | methodToCall(**self.operationKwargs[opId]) |
|
|
158 | 158 | |
|
|
159 | 159 | if self.dataOut is None: |
|
|
160 | 160 | return False |
|
|
161 | 161 | |
|
|
162 | 162 | if self.dataOut.isEmpty(): |
|
|
163 | 163 | return False |
|
|
164 | 164 | |
|
|
165 | 165 | return True |
|
|
166 | 166 | |
|
|
167 | 167 | def callObject(self, objId): |
|
|
168 | 168 | |
|
|
169 | 169 | """ |
|
|
170 | 170 | Ejecuta la operacion asociada al identificador del objeto "objId" |
|
|
171 | 171 | |
|
|
172 | 172 | Input: |
|
|
173 | 173 | |
|
|
174 | 174 | objId : identificador del objeto a ejecutar |
|
|
175 | 175 | |
|
|
176 | 176 | **kwargs : diccionario con los nombres y valores de la funcion a ejecutar. |
|
|
177 | 177 | |
|
|
178 | 178 | Return: |
|
|
179 | 179 | |
|
|
180 | 180 | None |
|
|
181 | 181 | """ |
|
|
182 | 182 | |
|
|
183 | 183 | if self.dataOut is not None and self.dataOut.isEmpty(): |
|
|
184 | 184 | return False |
|
|
185 | 185 | |
|
|
186 | 186 | externalProcObj = self.operations2RunDict[objId] |
|
|
187 | 187 | |
|
|
188 | 188 | if hasattr(externalProcObj, 'mp'): |
|
|
189 | 189 | if externalProcObj.mp is False: |
|
|
190 | 190 | self.operationKwargs[objId] = externalProcObj.kwargs |
|
|
191 | 191 | externalProcObj.mp = True |
|
|
192 | 192 | externalProcObj.start() |
|
|
193 | 193 | else: |
|
|
194 | 194 | externalProcObj.run(self.dataOut, **externalProcObj.kwargs) |
|
|
195 | 195 | self.operationKwargs[objId] = externalProcObj.kwargs |
|
|
196 | 196 | |
|
|
197 | 197 | return True |
|
|
198 | 198 | |
|
|
199 | 199 | def call(self, opType, opName=None, opId=None): |
|
|
200 | 200 | |
|
|
201 | 201 | """ |
|
|
202 | 202 | Return True si ejecuta la operacion interna nombrada "opName" o la operacion externa |
|
|
203 | 203 | identificada con el id "opId"; con los argumentos "**kwargs". |
|
|
204 | 204 | |
|
|
205 | 205 | False si la operacion no se ha ejecutado. |
|
|
206 | 206 | |
|
|
207 | 207 | Input: |
|
|
208 | 208 | |
|
|
209 | 209 | opType : Puede ser "self" o "external" |
|
|
210 | 210 | |
|
|
211 | 211 | Depende del tipo de operacion para llamar a:callMethod or callObject: |
|
|
212 | 212 | |
|
|
213 | 213 | 1. If opType = "self": Llama a un metodo propio de esta clase: |
|
|
214 | 214 | |
|
|
215 | 215 | name_method = getattr(self, name) |
|
|
216 | 216 | name_method(**kwargs) |
|
|
217 | 217 | |
|
|
218 | 218 | |
|
|
219 | 219 | 2. If opType = "other" o"external": Llama al metodo "run()" de una instancia de la |
|
|
220 | 220 | clase "Operation" o de un derivado de ella: |
|
|
221 | 221 | |
|
|
222 | 222 | instanceName = self.operationList[opId] |
|
|
223 | 223 | instanceName.run(**kwargs) |
|
|
224 | 224 | |
|
|
225 | 225 | opName : Si la operacion es interna (opType = 'self'), entonces el "opName" sera |
|
|
226 | 226 | usada para llamar a un metodo interno de la clase Processing |
|
|
227 | 227 | |
|
|
228 | 228 | opId : Si la operacion es externa (opType = 'other' o 'external), entonces el |
|
|
229 | 229 | "opId" sera usada para llamar al metodo "run" de la clase Operation |
|
|
230 | 230 | registrada anteriormente con ese Id |
|
|
231 | 231 | |
|
|
232 | 232 | Exception: |
|
|
233 | 233 | Este objeto de tipo Operation debe de haber sido agregado antes con el metodo: |
|
|
234 | 234 | "addOperation" e identificado con el valor "opId" = el id de la operacion. |
|
|
235 | 235 | De lo contrario retornara un error del tipo ValueError |
|
|
236 | 236 | |
|
|
237 | 237 | """ |
|
|
238 | 238 | |
|
|
239 | 239 | if opType == 'self': |
|
|
240 | 240 | |
|
|
241 | 241 | if not opName: |
|
|
242 | 242 | raise ValueError, "opName parameter should be defined" |
|
|
243 | 243 | |
|
|
244 | 244 | sts = self.callMethod(opName, opId) |
|
|
245 | 245 | |
|
|
246 | 246 | elif opType == 'other' or opType == 'external' or opType == 'plotter': |
|
|
247 | 247 | |
|
|
248 | 248 | if not opId: |
|
|
249 | 249 | raise ValueError, "opId parameter should be defined" |
|
|
250 | 250 | |
|
|
251 | 251 | if opId not in self.operations2RunDict.keys(): |
|
|
252 | 252 | raise ValueError, "Any operation with id=%s has been added" %str(opId) |
|
|
253 | 253 | |
|
|
254 | 254 | sts = self.callObject(opId) |
|
|
255 | 255 | |
|
|
256 | 256 | else: |
|
|
257 | 257 | raise ValueError, "opType should be 'self', 'external' or 'plotter'; and not '%s'" %opType |
|
|
258 | 258 | |
|
|
259 | 259 | return sts |
|
|
260 | 260 | |
|
|
261 | 261 | def setInput(self, dataIn): |
|
|
262 | 262 | |
|
|
263 | 263 | self.dataIn = dataIn |
|
|
264 | 264 | self.dataInList.append(dataIn) |
|
|
265 | 265 | |
|
|
266 | 266 | def getOutputObj(self): |
|
|
267 | 267 | |
|
|
268 | 268 | return self.dataOut |
|
|
269 | 269 | |
|
|
270 | 270 | def checkInputs(self): |
|
|
271 | 271 | |
|
|
272 | 272 | for thisDataIn in self.dataInList: |
|
|
273 | 273 | |
|
|
274 | 274 | if thisDataIn.isEmpty(): |
|
|
275 | 275 | return False |
|
|
276 | 276 | |
|
|
277 | 277 | return True |
|
|
278 | 278 | |
|
|
279 | 279 | def setup(self): |
|
|
280 | 280 | |
|
|
281 | 281 | raise NotImplementedError |
|
|
282 | 282 | |
|
|
283 | 283 | def run(self): |
|
|
284 | 284 | |
|
|
285 | 285 | raise NotImplementedError |
|
|
286 | 286 | |
|
|
287 | 287 | def close(self): |
|
|
288 | 288 | #Close every thread, queue or any other object here is it is neccesary. |
|
|
289 | 289 | return |
|
|
290 | 290 | |
|
|
291 | 291 | class Operation(object): |
|
|
292 | 292 | |
|
|
293 | 293 | """ |
|
|
294 | 294 | Clase base para definir las operaciones adicionales que se pueden agregar a la clase ProcessingUnit |
|
|
295 | 295 | y necesiten acumular informacion previa de los datos a procesar. De preferencia usar un buffer de |
|
|
296 | 296 | acumulacion dentro de esta clase |
|
|
297 | 297 | |
|
|
298 | 298 | Ejemplo: Integraciones coherentes, necesita la informacion previa de los n perfiles anteriores (bufffer) |
|
|
299 | 299 | |
|
|
300 | 300 | """ |
|
|
301 | 301 | |
|
|
302 | 302 | __buffer = None |
|
|
303 | 303 | isConfig = False |
|
|
304 | 304 | |
|
|
305 | 305 | def __init__(self, **kwargs): |
|
|
306 | 306 | |
|
|
307 | 307 | self.__buffer = None |
|
|
308 | 308 | self.isConfig = False |
|
|
309 | 309 | self.kwargs = kwargs |
|
|
310 | 310 | checkKwargs(self.run, kwargs) |
|
|
311 | 311 | |
|
|
312 | 312 | def getAllowedArgs(self): |
|
|
313 | 313 | return inspect.getargspec(self.run).args |
|
|
314 | 314 | |
|
|
315 | 315 | def setup(self): |
|
|
316 | 316 | |
|
|
317 | 317 | self.isConfig = True |
|
|
318 | 318 | |
|
|
319 | 319 | raise NotImplementedError |
|
|
320 | 320 | |
|
|
321 | 321 | def run(self, dataIn, **kwargs): |
|
|
322 | 322 | |
|
|
323 | 323 | """ |
|
|
324 | 324 | Realiza las operaciones necesarias sobre la dataIn.data y actualiza los |
|
|
325 | 325 | atributos del objeto dataIn. |
|
|
326 | 326 | |
|
|
327 | 327 | Input: |
|
|
328 | 328 | |
|
|
329 | 329 | dataIn : objeto del tipo JROData |
|
|
330 | 330 | |
|
|
331 | 331 | Return: |
|
|
332 | 332 | |
|
|
333 | 333 | None |
|
|
334 | 334 | |
|
|
335 | 335 | Affected: |
|
|
336 | 336 | __buffer : buffer de recepcion de datos. |
|
|
337 | 337 | |
|
|
338 | 338 | """ |
|
|
339 | 339 | if not self.isConfig: |
|
|
340 | 340 | self.setup(**kwargs) |
|
|
341 | 341 | |
|
|
342 | 342 | raise NotImplementedError |
|
|
343 | 343 | |
|
|
344 | 344 | def close(self): |
|
|
345 | 345 | |
|
|
346 | 346 | pass |
| @@ -1,445 +1,457 | |||
|
|
1 | 1 | ''' |
|
|
2 | 2 | @author: Juan C. Espinoza |
|
|
3 | 3 | ''' |
|
|
4 | 4 | |
|
|
5 | 5 | import time |
|
|
6 | 6 | import json |
|
|
7 | 7 | import numpy |
|
|
8 | 8 | import paho.mqtt.client as mqtt |
|
|
9 | 9 | import zmq |
|
|
10 | import cPickle as pickle | |
|
|
10 | from profilehooks import profile | |
|
|
11 | 11 | import datetime |
|
|
12 | 12 | from zmq.utils.monitor import recv_monitor_message |
|
|
13 | 13 | from functools import wraps |
|
|
14 | 14 | from threading import Thread |
|
|
15 | 15 | from multiprocessing import Process |
|
|
16 | 16 | |
|
|
17 | 17 | from schainpy.model.proc.jroproc_base import Operation, ProcessingUnit |
|
|
18 | 18 | |
|
|
19 | 19 | MAXNUMX = 100 |
|
|
20 | 20 | MAXNUMY = 100 |
|
|
21 | 21 | |
|
|
22 | 22 | class PrettyFloat(float): |
|
|
23 | 23 | def __repr__(self): |
|
|
24 | 24 | return '%.2f' % self |
|
|
25 | 25 | |
|
|
26 | 26 | def roundFloats(obj): |
|
|
27 | 27 | if isinstance(obj, list): |
|
|
28 | 28 | return map(roundFloats, obj) |
|
|
29 | 29 | elif isinstance(obj, float): |
|
|
30 | 30 | return round(obj, 2) |
|
|
31 | 31 | |
|
|
32 | def decimate(z): | |
|
|
32 | def decimate(z, MAXNUMY): | |
|
|
33 | 33 | # dx = int(len(self.x)/self.__MAXNUMX) + 1 |
|
|
34 | 34 | |
|
|
35 | 35 | dy = int(len(z[0])/MAXNUMY) + 1 |
|
|
36 | 36 | |
|
|
37 | 37 | return z[::, ::dy] |
|
|
38 | 38 | |
|
|
39 | 39 | class throttle(object): |
|
|
40 | 40 | """Decorator that prevents a function from being called more than once every |
|
|
41 | 41 | time period. |
|
|
42 | 42 | To create a function that cannot be called more than once a minute, but |
|
|
43 | 43 | will sleep until it can be called: |
|
|
44 | 44 | @throttle(minutes=1) |
|
|
45 | 45 | def foo(): |
|
|
46 | 46 | pass |
|
|
47 | 47 | |
|
|
48 | 48 | for i in range(10): |
|
|
49 | 49 | foo() |
|
|
50 | 50 | print "This function has run %s times." % i |
|
|
51 | 51 | """ |
|
|
52 | 52 | |
|
|
53 | 53 | def __init__(self, seconds=0, minutes=0, hours=0): |
|
|
54 | 54 | self.throttle_period = datetime.timedelta( |
|
|
55 | 55 | seconds=seconds, minutes=minutes, hours=hours |
|
|
56 | 56 | ) |
|
|
57 | 57 | |
|
|
58 | 58 | self.time_of_last_call = datetime.datetime.min |
|
|
59 | 59 | |
|
|
60 | 60 | def __call__(self, fn): |
|
|
61 | 61 | @wraps(fn) |
|
|
62 | 62 | def wrapper(*args, **kwargs): |
|
|
63 | 63 | now = datetime.datetime.now() |
|
|
64 | 64 | time_since_last_call = now - self.time_of_last_call |
|
|
65 | 65 | time_left = self.throttle_period - time_since_last_call |
|
|
66 | 66 | |
|
|
67 | 67 | if time_left > datetime.timedelta(seconds=0): |
|
|
68 | 68 | return |
|
|
69 | 69 | |
|
|
70 | 70 | self.time_of_last_call = datetime.datetime.now() |
|
|
71 | 71 | return fn(*args, **kwargs) |
|
|
72 | 72 | |
|
|
73 | 73 | return wrapper |
|
|
74 | 74 | |
|
|
75 | 75 | |
|
|
76 | 76 | class PublishData(Operation): |
|
|
77 | 77 | """Clase publish.""" |
|
|
78 | 78 | |
|
|
79 | 79 | def __init__(self, **kwargs): |
|
|
80 | 80 | """Inicio.""" |
|
|
81 | 81 | Operation.__init__(self, **kwargs) |
|
|
82 | 82 | self.isConfig = False |
|
|
83 | 83 | self.client = None |
|
|
84 | 84 | self.zeromq = None |
|
|
85 | 85 | self.mqtt = None |
|
|
86 | 86 | |
|
|
87 | 87 | def on_disconnect(self, client, userdata, rc): |
|
|
88 | 88 | if rc != 0: |
|
|
89 | 89 | print("Unexpected disconnection.") |
|
|
90 | 90 | self.connect() |
|
|
91 | 91 | |
|
|
92 | 92 | def connect(self): |
|
|
93 | 93 | print 'trying to connect' |
|
|
94 | 94 | try: |
|
|
95 | 95 | self.client.connect( |
|
|
96 | 96 | host=self.host, |
|
|
97 | 97 | port=self.port, |
|
|
98 | 98 | keepalive=60*10, |
|
|
99 | 99 | bind_address='') |
|
|
100 | 100 | self.client.loop_start() |
|
|
101 | 101 | # self.client.publish( |
|
|
102 | 102 | # self.topic + 'SETUP', |
|
|
103 | 103 | # json.dumps(setup), |
|
|
104 | 104 | # retain=True |
|
|
105 | 105 | # ) |
|
|
106 | 106 | except: |
|
|
107 | 107 | print "MQTT Conection error." |
|
|
108 | 108 | self.client = False |
|
|
109 | 109 | |
|
|
110 | def setup(self, port=1883, username=None, password=None, clientId="user", zeromq=1, **kwargs): | |
|
|
110 | def setup(self, port=1883, username=None, password=None, clientId="user", zeromq=1, verbose=True, **kwargs): | |
|
|
111 | 111 | self.counter = 0 |
|
|
112 | 112 | self.topic = kwargs.get('topic', 'schain') |
|
|
113 | 113 | self.delay = kwargs.get('delay', 0) |
|
|
114 | 114 | self.plottype = kwargs.get('plottype', 'spectra') |
|
|
115 | 115 | self.host = kwargs.get('host', "10.10.10.82") |
|
|
116 | 116 | self.port = kwargs.get('port', 3000) |
|
|
117 | 117 | self.clientId = clientId |
|
|
118 | 118 | self.cnt = 0 |
|
|
119 | 119 | self.zeromq = zeromq |
|
|
120 | 120 | self.mqtt = kwargs.get('plottype', 0) |
|
|
121 | 121 | self.client = None |
|
|
122 | self.verbose = verbose | |
|
|
123 | self.dataOut.firstdata = True | |
|
|
122 | 124 | setup = [] |
|
|
123 | 125 | if mqtt is 1: |
|
|
124 | 126 | self.client = mqtt.Client( |
|
|
125 | 127 | client_id=self.clientId + self.topic + 'SCHAIN', |
|
|
126 | 128 | clean_session=True) |
|
|
127 | 129 | self.client.on_disconnect = self.on_disconnect |
|
|
128 | 130 | self.connect() |
|
|
129 | 131 | for plot in self.plottype: |
|
|
130 | 132 | setup.append({ |
|
|
131 | 133 | 'plot': plot, |
|
|
132 | 134 | 'topic': self.topic + plot, |
|
|
133 | 135 | 'title': getattr(self, plot + '_' + 'title', False), |
|
|
134 | 136 | 'xlabel': getattr(self, plot + '_' + 'xlabel', False), |
|
|
135 | 137 | 'ylabel': getattr(self, plot + '_' + 'ylabel', False), |
|
|
136 | 138 | 'xrange': getattr(self, plot + '_' + 'xrange', False), |
|
|
137 | 139 | 'yrange': getattr(self, plot + '_' + 'yrange', False), |
|
|
138 | 140 | 'zrange': getattr(self, plot + '_' + 'zrange', False), |
|
|
139 | 141 | }) |
|
|
140 | 142 | if zeromq is 1: |
|
|
141 | 143 | context = zmq.Context() |
|
|
142 | 144 | self.zmq_socket = context.socket(zmq.PUSH) |
|
|
143 | 145 | server = kwargs.get('server', 'zmq.pipe') |
|
|
144 | 146 | |
|
|
145 | 147 | if 'tcp://' in server: |
|
|
146 | 148 | address = server |
|
|
147 | 149 | else: |
|
|
148 | 150 | address = 'ipc:///tmp/%s' % server |
|
|
149 | 151 | |
|
|
150 | 152 | self.zmq_socket.connect(address) |
|
|
151 | 153 | time.sleep(1) |
|
|
152 | 154 | |
|
|
155 | ||
|
|
153 | 156 | def publish_data(self): |
|
|
154 | 157 | self.dataOut.finished = False |
|
|
155 | 158 | if self.mqtt is 1: |
|
|
156 | 159 | yData = self.dataOut.heightList[:2].tolist() |
|
|
157 | 160 | if self.plottype == 'spectra': |
|
|
158 | 161 | data = getattr(self.dataOut, 'data_spc') |
|
|
159 | 162 | z = data/self.dataOut.normFactor |
|
|
160 | 163 | zdB = 10*numpy.log10(z) |
|
|
161 | 164 | xlen, ylen = zdB[0].shape |
|
|
162 | 165 | dx = int(xlen/MAXNUMX) + 1 |
|
|
163 | 166 | dy = int(ylen/MAXNUMY) + 1 |
|
|
164 | 167 | Z = [0 for i in self.dataOut.channelList] |
|
|
165 | 168 | for i in self.dataOut.channelList: |
|
|
166 | 169 | Z[i] = zdB[i][::dx, ::dy].tolist() |
|
|
167 | 170 | payload = { |
|
|
168 | 171 | 'timestamp': self.dataOut.utctime, |
|
|
169 | 172 | 'data': roundFloats(Z), |
|
|
170 | 173 | 'channels': ['Ch %s' % ch for ch in self.dataOut.channelList], |
|
|
171 | 174 | 'interval': self.dataOut.getTimeInterval(), |
|
|
172 | 175 | 'type': self.plottype, |
|
|
173 | 176 | 'yData': yData |
|
|
174 | 177 | } |
|
|
175 | 178 | # print payload |
|
|
176 | 179 | |
|
|
177 | 180 | elif self.plottype in ('rti', 'power'): |
|
|
178 | 181 | data = getattr(self.dataOut, 'data_spc') |
|
|
179 | 182 | z = data/self.dataOut.normFactor |
|
|
180 | 183 | avg = numpy.average(z, axis=1) |
|
|
181 | 184 | avgdB = 10*numpy.log10(avg) |
|
|
182 | 185 | xlen, ylen = z[0].shape |
|
|
183 | 186 | dy = numpy.floor(ylen/self.__MAXNUMY) + 1 |
|
|
184 | 187 | AVG = [0 for i in self.dataOut.channelList] |
|
|
185 | 188 | for i in self.dataOut.channelList: |
|
|
186 | 189 | AVG[i] = avgdB[i][::dy].tolist() |
|
|
187 | 190 | payload = { |
|
|
188 | 191 | 'timestamp': self.dataOut.utctime, |
|
|
189 | 192 | 'data': roundFloats(AVG), |
|
|
190 | 193 | 'channels': ['Ch %s' % ch for ch in self.dataOut.channelList], |
|
|
191 | 194 | 'interval': self.dataOut.getTimeInterval(), |
|
|
192 | 195 | 'type': self.plottype, |
|
|
193 | 196 | 'yData': yData |
|
|
194 | 197 | } |
|
|
195 | 198 | elif self.plottype == 'noise': |
|
|
196 | 199 | noise = self.dataOut.getNoise()/self.dataOut.normFactor |
|
|
197 | 200 | noisedB = 10*numpy.log10(noise) |
|
|
198 | 201 | payload = { |
|
|
199 | 202 | 'timestamp': self.dataOut.utctime, |
|
|
200 | 203 | 'data': roundFloats(noisedB.reshape(-1, 1).tolist()), |
|
|
201 | 204 | 'channels': ['Ch %s' % ch for ch in self.dataOut.channelList], |
|
|
202 | 205 | 'interval': self.dataOut.getTimeInterval(), |
|
|
203 | 206 | 'type': self.plottype, |
|
|
204 | 207 | 'yData': yData |
|
|
205 | 208 | } |
|
|
206 | 209 | elif self.plottype == 'snr': |
|
|
207 | 210 | data = getattr(self.dataOut, 'data_SNR') |
|
|
208 | 211 | avgdB = 10*numpy.log10(data) |
|
|
209 | 212 | |
|
|
210 | 213 | ylen = data[0].size |
|
|
211 | 214 | dy = numpy.floor(ylen/self.__MAXNUMY) + 1 |
|
|
212 | 215 | AVG = [0 for i in self.dataOut.channelList] |
|
|
213 | 216 | for i in self.dataOut.channelList: |
|
|
214 | 217 | AVG[i] = avgdB[i][::dy].tolist() |
|
|
215 | 218 | payload = { |
|
|
216 | 219 | 'timestamp': self.dataOut.utctime, |
|
|
217 | 220 | 'data': roundFloats(AVG), |
|
|
218 | 221 | 'channels': ['Ch %s' % ch for ch in self.dataOut.channelList], |
|
|
219 | 222 | 'type': self.plottype, |
|
|
220 | 223 | 'yData': yData |
|
|
221 | 224 | } |
|
|
222 | 225 | else: |
|
|
223 | 226 | print "Tipo de grafico invalido" |
|
|
224 | 227 | payload = { |
|
|
225 | 228 | 'data': 'None', |
|
|
226 | 229 | 'timestamp': 'None', |
|
|
227 | 230 | 'type': None |
|
|
228 | 231 | } |
|
|
229 | 232 | # print 'Publishing data to {}'.format(self.host) |
|
|
230 | 233 | self.client.publish(self.topic + self.plottype, json.dumps(payload), qos=0) |
|
|
231 | 234 | |
|
|
232 | 235 | if self.zeromq is 1: |
|
|
236 | if self.verbose: | |
|
|
233 | 237 | print '[Sending] {} - {}'.format(self.dataOut.type, self.dataOut.datatime) |
|
|
234 | 238 | self.zmq_socket.send_pyobj(self.dataOut) |
|
|
239 | self.dataOut.firstdata = False | |
|
|
240 | ||
|
|
235 | 241 | |
|
|
236 | 242 | def run(self, dataOut, **kwargs): |
|
|
237 | 243 | self.dataOut = dataOut |
|
|
238 | 244 | if not self.isConfig: |
|
|
239 | 245 | self.setup(**kwargs) |
|
|
240 | 246 | self.isConfig = True |
|
|
241 | 247 | |
|
|
242 | 248 | self.publish_data() |
|
|
243 | 249 | time.sleep(self.delay) |
|
|
244 | 250 | |
|
|
245 | 251 | def close(self): |
|
|
246 | 252 | if self.zeromq is 1: |
|
|
247 | 253 | self.dataOut.finished = True |
|
|
248 | 254 | self.zmq_socket.send_pyobj(self.dataOut) |
|
|
249 | ||
|
|
255 | self.zmq_socket.close() | |
|
|
250 | 256 | if self.client: |
|
|
251 | 257 | self.client.loop_stop() |
|
|
252 | 258 | self.client.disconnect() |
|
|
253 | 259 | |
|
|
254 | ||
|
|
255 | 260 | class ReceiverData(ProcessingUnit, Process): |
|
|
256 | 261 | |
|
|
257 | 262 | throttle_value = 5 |
|
|
258 | 263 | |
|
|
259 | 264 | def __init__(self, **kwargs): |
|
|
260 | 265 | |
|
|
261 | 266 | ProcessingUnit.__init__(self, **kwargs) |
|
|
262 | 267 | Process.__init__(self) |
|
|
263 | 268 | self.mp = False |
|
|
264 | 269 | self.isConfig = False |
|
|
265 | 270 | self.isWebConfig = False |
|
|
266 | 271 | self.plottypes =[] |
|
|
267 | 272 | self.connections = 0 |
|
|
268 | 273 | server = kwargs.get('server', 'zmq.pipe') |
|
|
269 | 274 | plot_server = kwargs.get('plot_server', 'zmq.web') |
|
|
270 | 275 | if 'tcp://' in server: |
|
|
271 | 276 | address = server |
|
|
272 | 277 | else: |
|
|
273 | 278 | address = 'ipc:///tmp/%s' % server |
|
|
274 | 279 | |
|
|
275 | 280 | if 'tcp://' in plot_server: |
|
|
276 | 281 | plot_address = plot_server |
|
|
277 | 282 | else: |
|
|
278 | 283 | plot_address = 'ipc:///tmp/%s' % plot_server |
|
|
279 | 284 | |
|
|
280 | 285 | self.address = address |
|
|
281 | 286 | self.plot_address = plot_address |
|
|
282 | 287 | self.plottypes = [s.strip() for s in kwargs.get('plottypes', 'rti').split(',')] |
|
|
283 | 288 | self.realtime = kwargs.get('realtime', False) |
|
|
284 | 289 | self.throttle_value = kwargs.get('throttle', 5) |
|
|
285 | 290 | self.sendData = self.initThrottle(self.throttle_value) |
|
|
286 | 291 | self.setup() |
|
|
287 | 292 | |
|
|
288 | 293 | def setup(self): |
|
|
289 | 294 | |
|
|
290 | 295 | self.data = {} |
|
|
291 | 296 | self.data['times'] = [] |
|
|
292 | 297 | for plottype in self.plottypes: |
|
|
293 | 298 | self.data[plottype] = {} |
|
|
294 | 299 | self.data['noise'] = {} |
|
|
295 | 300 | self.data['throttle'] = self.throttle_value |
|
|
296 | 301 | self.data['ENDED'] = False |
|
|
297 | 302 | self.isConfig = True |
|
|
298 | 303 | self.data_web = {} |
|
|
299 | 304 | |
|
|
300 | 305 | def event_monitor(self, monitor): |
|
|
301 | 306 | |
|
|
302 | 307 | events = {} |
|
|
303 | 308 | |
|
|
304 | 309 | for name in dir(zmq): |
|
|
305 | 310 | if name.startswith('EVENT_'): |
|
|
306 | 311 | value = getattr(zmq, name) |
|
|
307 | 312 | events[value] = name |
|
|
308 | 313 | |
|
|
309 | 314 | while monitor.poll(): |
|
|
310 | 315 | evt = recv_monitor_message(monitor) |
|
|
311 | 316 | if evt['event'] == 32: |
|
|
312 | 317 | self.connections += 1 |
|
|
313 | 318 | if evt['event'] == 512: |
|
|
314 | 319 | pass |
|
|
315 | 320 | if self.connections == 0 and self.started is True: |
|
|
316 | 321 | self.ended = True |
|
|
317 | 322 | |
|
|
318 | 323 | evt.update({'description': events[evt['event']]}) |
|
|
319 | 324 | |
|
|
320 | 325 | if evt['event'] == zmq.EVENT_MONITOR_STOPPED: |
|
|
321 | 326 | break |
|
|
322 | 327 | monitor.close() |
|
|
323 | 328 | print("event monitor thread done!") |
|
|
324 | 329 | |
|
|
325 | 330 | def initThrottle(self, throttle_value): |
|
|
326 | 331 | |
|
|
327 | 332 | @throttle(seconds=throttle_value) |
|
|
328 | 333 | def sendDataThrottled(fn_sender, data): |
|
|
329 | 334 | fn_sender(data) |
|
|
330 | 335 | |
|
|
331 | 336 | return sendDataThrottled |
|
|
332 | 337 | |
|
|
338 | ||
|
|
333 | 339 | def send(self, data): |
|
|
334 | 340 | # print '[sending] data=%s size=%s' % (data.keys(), len(data['times'])) |
|
|
335 | 341 | self.sender.send_pyobj(data) |
|
|
336 | 342 | |
|
|
337 | def update(self): | |
|
|
338 | 343 | |
|
|
344 | def update(self): | |
|
|
339 | 345 | t = self.dataOut.utctime |
|
|
340 | 346 | |
|
|
341 | 347 | if t in self.data['times']: |
|
|
342 | 348 | return |
|
|
343 | 349 | |
|
|
344 | 350 | self.data['times'].append(t) |
|
|
345 | 351 | self.data['dataOut'] = self.dataOut |
|
|
346 | 352 | |
|
|
347 | 353 | for plottype in self.plottypes: |
|
|
348 | 354 | if plottype == 'spc': |
|
|
349 | 355 | z = self.dataOut.data_spc/self.dataOut.normFactor |
|
|
350 | 356 | self.data[plottype] = 10*numpy.log10(z) |
|
|
351 | 357 | self.data['noise'][t] = 10*numpy.log10(self.dataOut.getNoise()/self.dataOut.normFactor) |
|
|
352 | 358 | if plottype == 'cspc': |
|
|
353 | 359 | jcoherence = self.dataOut.data_cspc/numpy.sqrt(self.dataOut.data_spc*self.dataOut.data_spc) |
|
|
354 | 360 | self.data['cspc_coh'] = numpy.abs(jcoherence) |
|
|
355 | 361 | self.data['cspc_phase'] = numpy.arctan2(jcoherence.imag, jcoherence.real)*180/numpy.pi |
|
|
356 | 362 | if plottype == 'rti': |
|
|
357 | 363 | self.data[plottype][t] = self.dataOut.getPower() |
|
|
358 | 364 | if plottype == 'snr': |
|
|
359 | 365 | self.data[plottype][t] = 10*numpy.log10(self.dataOut.data_SNR) |
|
|
360 | 366 | if plottype == 'dop': |
|
|
361 | 367 | self.data[plottype][t] = 10*numpy.log10(self.dataOut.data_DOP) |
|
|
362 | 368 | if plottype == 'mean': |
|
|
363 | 369 | self.data[plottype][t] = self.dataOut.data_MEAN |
|
|
364 | 370 | if plottype == 'std': |
|
|
365 | 371 | self.data[plottype][t] = self.dataOut.data_STD |
|
|
366 | 372 | if plottype == 'coh': |
|
|
367 | 373 | self.data[plottype][t] = self.dataOut.getCoherence() |
|
|
368 | 374 | if plottype == 'phase': |
|
|
369 | 375 | self.data[plottype][t] = self.dataOut.getCoherence(phase=True) |
|
|
370 | 376 | if plottype == 'wind': |
|
|
371 | 377 | self.data[plottype][t] = self.dataOut.data_output |
|
|
372 | 378 | if self.realtime: |
|
|
373 | 379 | self.data_web['timestamp'] = t |
|
|
374 | 380 | if plottype == 'spc': |
|
|
375 | 381 | self.data_web[plottype] = roundFloats(decimate(self.data[plottype]).tolist()) |
|
|
376 | 382 | elif plottype == 'cspc': |
|
|
377 | 383 | self.data_web['cspc_coh'] = roundFloats(decimate(self.data['cspc_coh']).tolist()) |
|
|
378 | 384 | self.data_web['cspc_phase'] = roundFloats(decimate(self.data['cspc_phase']).tolist()) |
|
|
379 | 385 | elif plottype == 'noise': |
|
|
380 | 386 | self.data_web['noise'] = roundFloats(self.data['noise'][t].tolist()) |
|
|
381 | 387 | else: |
|
|
382 | 388 | self.data_web[plottype] = roundFloats(decimate(self.data[plottype][t]).tolist()) |
|
|
383 | 389 | self.data_web['interval'] = self.dataOut.getTimeInterval() |
|
|
384 | 390 | self.data_web['type'] = plottype |
|
|
385 | 391 | |
|
|
386 | 392 | def run(self): |
|
|
387 | 393 | |
|
|
388 | 394 | print '[Starting] {} from {}'.format(self.name, self.address) |
|
|
389 | 395 | |
|
|
390 | 396 | self.context = zmq.Context() |
|
|
391 | 397 | self.receiver = self.context.socket(zmq.PULL) |
|
|
392 | 398 | self.receiver.bind(self.address) |
|
|
393 | 399 | monitor = self.receiver.get_monitor_socket() |
|
|
394 | 400 | self.sender = self.context.socket(zmq.PUB) |
|
|
395 | 401 | if self.realtime: |
|
|
396 | 402 | self.sender_web = self.context.socket(zmq.PUB) |
|
|
397 | 403 | self.sender_web.connect(self.plot_address) |
|
|
398 | 404 | time.sleep(1) |
|
|
399 | 405 | self.sender.bind("ipc:///tmp/zmq.plots") |
|
|
400 | ||
|
|
406 | time.sleep(3) | |
|
|
401 | 407 | t = Thread(target=self.event_monitor, args=(monitor,)) |
|
|
402 | 408 | t.start() |
|
|
403 | 409 | |
|
|
404 | 410 | while True: |
|
|
405 | 411 | self.dataOut = self.receiver.recv_pyobj() |
|
|
406 | 412 | # print '[Receiving] {} - {}'.format(self.dataOut.type, |
|
|
407 | 413 | # self.dataOut.datatime.ctime()) |
|
|
408 | 414 | |
|
|
409 | 415 | self.update() |
|
|
410 | 416 | |
|
|
417 | if self.dataOut.firstdata is True: | |
|
|
418 | self.data['STARTED'] = True | |
|
|
419 | ||
|
|
420 | ||
|
|
411 | 421 | if self.dataOut.finished is True: |
|
|
412 | 422 | self.send(self.data) |
|
|
413 | 423 | self.connections -= 1 |
|
|
414 | 424 | if self.connections == 0 and self.started: |
|
|
415 | 425 | self.ended = True |
|
|
416 | 426 | self.data['ENDED'] = True |
|
|
417 | 427 | self.send(self.data) |
|
|
418 | 428 | self.setup() |
|
|
429 | self.started = False | |
|
|
419 | 430 | else: |
|
|
420 | 431 | if self.realtime: |
|
|
421 | 432 | self.send(self.data) |
|
|
422 | 433 | self.sender_web.send_string(json.dumps(self.data_web)) |
|
|
423 | 434 | else: |
|
|
424 | 435 | self.sendData(self.send, self.data) |
|
|
425 | 436 | self.started = True |
|
|
426 | 437 | |
|
|
438 | self.data['STARTED'] = False | |
|
|
427 | 439 | return |
|
|
428 | 440 | |
|
|
429 | 441 | def sendToWeb(self): |
|
|
430 | 442 | |
|
|
431 | 443 | if not self.isWebConfig: |
|
|
432 | 444 | context = zmq.Context() |
|
|
433 | 445 | sender_web_config = context.socket(zmq.PUB) |
|
|
434 | 446 | if 'tcp://' in self.plot_address: |
|
|
435 | 447 | dum, address, port = self.plot_address.split(':') |
|
|
436 | 448 | conf_address = '{}:{}:{}'.format(dum, address, int(port)+1) |
|
|
437 | 449 | else: |
|
|
438 | 450 | conf_address = self.plot_address + '.config' |
|
|
439 | 451 | sender_web_config.bind(conf_address) |
|
|
440 | 452 | time.sleep(1) |
|
|
441 | 453 | for kwargs in self.operationKwargs.values(): |
|
|
442 | 454 | if 'plot' in kwargs: |
|
|
443 | 455 | print '[Sending] Config data to web for {}'.format(kwargs['code'].upper()) |
|
|
444 | 456 | sender_web_config.send_string(json.dumps(kwargs)) |
|
|
445 | 457 | self.isWebConfig = True |
| @@ -1,96 +1,97 | |||
|
|
1 | 1 | import argparse |
|
|
2 | 2 | |
|
|
3 | 3 | from schainpy.controller import Project, multiSchain |
|
|
4 | 4 | |
|
|
5 | 5 | desc = "HF_EXAMPLE" |
|
|
6 | 6 | |
|
|
7 | 7 | def fiber(cursor, skip, q, dt): |
|
|
8 | 8 | |
|
|
9 | 9 | controllerObj = Project() |
|
|
10 | 10 | |
|
|
11 | 11 | controllerObj.setup(id='191', name='test01', description=desc) |
|
|
12 | 12 | |
|
|
13 | 13 | readUnitConfObj = controllerObj.addReadUnit(datatype='SpectraReader', |
|
|
14 |
path='/home/nanosat/data/ |
|
|
|
14 | path='/home/nanosat/data/sp1_f0', | |
|
|
15 | 15 | startDate=dt, |
|
|
16 | 16 | endDate=dt, |
|
|
17 | 17 | startTime="00:00:00", |
|
|
18 | 18 | endTime="23:59:59", |
|
|
19 | 19 | online=0, |
|
|
20 | 20 | #set=1426485881, |
|
|
21 | delay=10, | |
|
|
22 | 21 | walk=1, |
|
|
23 | 22 | queue=q, |
|
|
24 | 23 | cursor=cursor, |
|
|
25 | 24 | skip=skip, |
|
|
25 | verbose=1 | |
|
|
26 | 26 | #timezone=-5*3600 |
|
|
27 | 27 | ) |
|
|
28 | 28 | |
|
|
29 | 29 | # #opObj11 = readUnitConfObj.addOperation(name='printNumberOfBlock') |
|
|
30 | 30 | # |
|
|
31 | 31 | procUnitConfObj2 = controllerObj.addProcUnit(datatype='Spectra', inputId=readUnitConfObj.getId()) |
|
|
32 | 32 | # procUnitConfObj2.addParameter(name='nipp', value='5', format='int') |
|
|
33 | 33 | |
|
|
34 | 34 | procUnitConfObj3 = controllerObj.addProcUnit(datatype='ParametersProc', inputId=readUnitConfObj.getId()) |
|
|
35 | 35 | opObj11 = procUnitConfObj3.addOperation(name='SpectralMoments', optype='other') |
|
|
36 | 36 | |
|
|
37 | 37 | # |
|
|
38 | 38 | # opObj11 = procUnitConfObj1.addOperation(name='SpectraPlot', optype='other') |
|
|
39 | 39 | # opObj11.addParameter(name='id', value='1000', format='int') |
|
|
40 | 40 | # opObj11.addParameter(name='wintitle', value='HF_Jicamarca_Spc', format='str') |
|
|
41 | 41 | # opObj11.addParameter(name='channelList', value='0', format='intlist') |
|
|
42 | 42 | # opObj11.addParameter(name='zmin', value='-120', format='float') |
|
|
43 | 43 | # opObj11.addParameter(name='zmax', value='-70', format='float') |
|
|
44 | 44 | # opObj11.addParameter(name='save', value='1', format='int') |
|
|
45 | 45 | # opObj11.addParameter(name='figpath', value=figpath, format='str') |
|
|
46 | 46 | |
|
|
47 | opObj11 = procUnitConfObj3.addOperation(name='Parameters1Plot', optype='other') | |
|
|
48 | opObj11.addParameter(name='channelList', value='0', format='intList') | |
|
|
47 | # opObj11 = procUnitConfObj3.addOperation(name='Parameters1Plot', optype='other') | |
|
|
48 | # opObj11.addParameter(name='channelList', value='0', format='intList') | |
|
|
49 | 49 | |
|
|
50 | opObj11.addParameter(name='id', value='2000', format='int') | |
|
|
51 | # opObj11.addParameter(name='colormap', value='0', format='bool') | |
|
|
52 | opObj11.addParameter(name='onlySNR', value='1', format='bool') | |
|
|
53 | opObj11.addParameter(name='DOP', value='0', format='bool') | |
|
|
54 | # opObj11.addParameter(name='showSNR', value='1', format='bool') | |
|
|
55 | # opObj11.addParameter(name='SNRthresh', value='0', format='int') | |
|
|
50 | # opObj11.addParameter(name='id', value='2000', format='int') | |
|
|
51 | # # opObj11.addParameter(name='colormap', value='0', format='bool') | |
|
|
52 | # opObj11.addParameter(name='onlySNR', value='1', format='bool') | |
|
|
53 | # opObj11.addParameter(name='DOP', value='0', format='bool') | |
|
|
54 | # # opObj11.addParameter(name='showSNR', value='1', format='bool') | |
|
|
55 | # # opObj11.addParameter(name='SNRthresh', value='0', format='int') | |
|
|
56 | 56 | # opObj11.addParameter(name='SNRmin', value='-10', format='int') |
|
|
57 | 57 | # opObj11.addParameter(name='SNRmax', value='30', format='int') |
|
|
58 | 58 | |
|
|
59 | 59 | # opObj11.addParameter(name='showSNR', value='1', format='int') |
|
|
60 | 60 | # # opObj11.addParameter(name='channelList', value='0', format='intlist') |
|
|
61 | 61 | # # opObj11.addParameter(name='xmin', value='0', format='float') |
|
|
62 | 62 | # opObj11.addParameter(name='xmin', value='0', format='float') |
|
|
63 | 63 | # opObj11.addParameter(name='xmax', value='24', format='float') |
|
|
64 | 64 | |
|
|
65 | 65 | # opObj11.addParameter(name='zmin', value='-110', format='float') |
|
|
66 | 66 | # opObj11.addParameter(name='zmax', value='-70', format='float') |
|
|
67 | 67 | # opObj11.addParameter(name='save', value='0', format='int') |
|
|
68 | 68 | # # opObj11.addParameter(name='figpath', value='/tmp/', format='str') |
|
|
69 | 69 | # |
|
|
70 | 70 | opObj12 = procUnitConfObj3.addOperation(name='PublishData', optype='other') |
|
|
71 | 71 | opObj12.addParameter(name='zeromq', value=1, format='int') |
|
|
72 | opObj12.addParameter(name='verbose', value=0, format='bool') | |
|
|
72 | 73 | |
|
|
73 | 74 | |
|
|
74 | 75 | # opObj13 = procUnitConfObj3.addOperation(name='PublishData', optype='other') |
|
|
75 | 76 | # opObj13.addParameter(name='zeromq', value=1, format='int') |
|
|
76 | 77 | # opObj13.addParameter(name='server', value="juanca", format='str') |
|
|
77 | 78 | |
|
|
78 |
opObj12.addParameter(name='delay', value= |
|
|
|
79 | opObj12.addParameter(name='delay', value=0, format='int') | |
|
|
79 | 80 | |
|
|
80 | 81 | |
|
|
81 | 82 | # print "Escribiendo el archivo XML" |
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82 | 83 | # controllerObj.writeXml(filename) |
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83 | 84 | # print "Leyendo el archivo XML" |
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84 | 85 | # controllerObj.readXml(filename) |
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85 | 86 | |
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86 | 87 | |
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87 | 88 | # timeit.timeit('controllerObj.run()', number=2) |
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88 | 89 | |
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89 | 90 | controllerObj.start() |
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90 | 91 | |
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91 | 92 | |
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92 | 93 | if __name__ == '__main__': |
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93 | 94 | parser = argparse.ArgumentParser(description='Set number of parallel processes') |
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94 | 95 | parser.add_argument('--nProcess', default=1, type=int) |
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95 | 96 | args = parser.parse_args() |
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96 |
multiSchain(fiber, nProcess=args.nProcess, startDate='201 |
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97 | multiSchain(fiber, nProcess=args.nProcess, startDate='2017/01/26', endDate='2017/01/28') | |
| @@ -1,75 +1,97 | |||
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1 | #!/usr/bin/env python | |
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2 | ''' | |
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3 | Created on Jul 7, 2014 | |
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1 | import argparse | |
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4 | 2 | |
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5 | @author: roj-idl71 | |
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6 | ''' | |
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7 | import os, sys | |
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8 | from datetime import datetime, timedelta | |
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9 | import multiprocessing | |
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10 | from schainpy.controller import Project | |
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3 | from schainpy.controller import Project, multiSchain | |
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11 | 4 | |
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12 | def main(date): | |
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5 | desc = "HF_EXAMPLE" | |
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6 | ||
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7 | def fiber(cursor, skip, q, dt): | |
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13 | 8 | |
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14 | 9 | controllerObj = Project() |
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15 | 10 | |
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16 |
controllerObj.setup(id='191', name='test01', description= |
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11 | controllerObj.setup(id='191', name='test01', description=desc) | |
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17 | 12 | |
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18 | readUnitConfObj = controllerObj.addReadUnit(datatype='Spectra', | |
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19 |
path='/home/nanosat/data/ |
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20 |
startDate=d |
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21 |
endDate=d |
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22 |
startTime= |
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23 |
endTime= |
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13 | readUnitConfObj = controllerObj.addReadUnit(datatype='SpectraReader', | |
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14 | path='/home/nanosat/data/julia', | |
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15 | startDate=dt, | |
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16 | endDate=dt, | |
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17 | startTime="00:00:00", | |
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18 | endTime="23:59:59", | |
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24 | 19 | online=0, |
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20 | #set=1426485881, | |
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21 | delay=10, | |
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25 | 22 | walk=1, |
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26 |
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27 | ||
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28 | procUnitConfObj1 = controllerObj.addProcUnit(datatype='Spectra', inputId=readUnitConfObj.getId()) | |
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29 | #opObj11 = procUnitConfObj1.addOperation(name='removeDC') | |
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30 | #opObj11.addParameter(name='mode', value='1', format='int') | |
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31 | ||
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32 |
#opObj11 = |
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33 | ||
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34 | ||
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35 | opObj11 = procUnitConfObj1.addOperation(name='RTIPlot', optype='other') | |
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36 | opObj11.addParameter(name='id', value='10', format='int') | |
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37 | opObj11.addParameter(name='wintitle', value='150Km', format='str') | |
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38 | opObj11.addParameter(name='colormap', value='jro', format='str') | |
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39 | opObj11.addParameter(name='xaxis', value='time', format='str') | |
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40 | opObj11.addParameter(name='xmin', value='0', format='int') | |
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41 | opObj11.addParameter(name='xmax', value='23', format='int') | |
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42 |
#opObj11.addParameter(name=' |
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43 |
#opObj11.addParameter(name=' |
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44 |
opObj11.addParameter(name=' |
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45 |
opObj11.addParameter(name='zm |
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46 | ||
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47 | ||
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48 | ||
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49 | ||
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50 |
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51 |
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52 | opObject12.addParameter(name='wintitle', value='150Km', format='str') | |
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53 |
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54 |
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55 |
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56 |
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57 |
# |
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58 |
# |
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59 |
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60 |
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61 | #opObject12.addParameter(name='pause', value='1', format='bool') | |
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62 |
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63 |
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64 | ||
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23 | queue=q, | |
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24 | cursor=cursor, | |
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25 | skip=skip, | |
|
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26 | #timezone=-5*3600 | |
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27 | ) | |
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28 | ||
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29 | # #opObj11 = readUnitConfObj.addOperation(name='printNumberOfBlock') | |
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30 | # | |
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31 | procUnitConfObj2 = controllerObj.addProcUnit(datatype='Spectra', inputId=readUnitConfObj.getId()) | |
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32 | # procUnitConfObj2.addParameter(name='nipp', value='5', format='int') | |
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33 | ||
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34 | # procUnitConfObj3 = controllerObj.addProcUnit(datatype='ParametersProc', inputId=readUnitConfObj.getId()) | |
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35 | # opObj11 = procUnitConfObj3.addOperation(name='SpectralMoments', optype='other') | |
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36 | ||
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37 | # | |
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38 | # opObj11 = procUnitConfObj1.addOperation(name='SpectraPlot', optype='other') | |
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39 | # opObj11.addParameter(name='id', value='1000', format='int') | |
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40 | # opObj11.addParameter(name='wintitle', value='HF_Jicamarca_Spc', format='str') | |
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41 | # opObj11.addParameter(name='channelList', value='0', format='intlist') | |
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42 | # opObj11.addParameter(name='zmin', value='-120', format='float') | |
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43 | # opObj11.addParameter(name='zmax', value='-70', format='float') | |
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44 | # opObj11.addParameter(name='save', value='1', format='int') | |
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45 | # opObj11.addParameter(name='figpath', value=figpath, format='str') | |
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46 | ||
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47 | # opObj11 = procUnitConfObj3.addOperation(name='Parameters1Plot', optype='other') | |
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48 | # opObj11.addParameter(name='channelList', value='0', format='intList') | |
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49 | # | |
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50 | # opObj11.addParameter(name='id', value='2000', format='int') | |
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51 | # # opObj11.addParameter(name='colormap', value='0', format='bool') | |
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52 | # opObj11.addParameter(name='onlySNR', value='1', format='bool') | |
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53 | # opObj11.addParameter(name='DOP', value='0', format='bool') | |
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54 | # opObj11.addParameter(name='showSNR', value='1', format='bool') | |
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55 | # opObj11.addParameter(name='SNRthresh', value='0', format='int') | |
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56 | # opObj11.addParameter(name='SNRmin', value='-10', format='int') | |
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57 | # opObj11.addParameter(name='SNRmax', value='30', format='int') | |
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58 | ||
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59 | # opObj11.addParameter(name='showSNR', value='1', format='int') | |
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60 | # # opObj11.addParameter(name='channelList', value='0', format='intlist') | |
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61 | # # opObj11.addParameter(name='xmin', value='0', format='float') | |
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62 | # opObj11.addParameter(name='xmin', value='0', format='float') | |
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63 | # opObj11.addParameter(name='xmax', value='24', format='float') | |
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64 | ||
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65 | # opObj11.addParameter(name='zmin', value='-110', format='float') | |
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66 | # opObj11.addParameter(name='zmax', value='-70', format='float') | |
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67 | # opObj11.addParameter(name='save', value='0', format='int') | |
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68 | # # opObj11.addParameter(name='figpath', value='/tmp/', format='str') | |
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69 | # | |
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70 | opObj12 = procUnitConfObj2.addOperation(name='PublishData', optype='other') | |
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71 | opObj12.addParameter(name='zeromq', value=1, format='int') | |
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72 | # opObj12.addParameter(name='server', value='tcp://10.10.10.82:7000', format='str') | |
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73 | ||
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74 | ||
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75 | # opObj13 = procUnitConfObj3.addOperation(name='PublishData', optype='other') | |
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76 | # opObj13.addParameter(name='zeromq', value=1, format='int') | |
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77 | # opObj13.addParameter(name='server', value="juanca", format='str') | |
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78 | ||
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79 | # opObj12.addParameter(name='delay', value=1, format='int') | |
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80 | ||
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81 | ||
|
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82 | # print "Escribiendo el archivo XML" | |
|
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83 | # controllerObj.writeXml(filename) | |
|
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84 | # print "Leyendo el archivo XML" | |
|
|
85 | # controllerObj.readXml(filename) | |
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86 | ||
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87 | ||
|
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88 | # timeit.timeit('controllerObj.run()', number=2) | |
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65 | 89 | |
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66 | 90 | controllerObj.start() |
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67 | 91 | |
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68 | if __name__=='__main__': | |
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69 | 92 | |
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70 | dt = datetime(2017, 1, 12) | |
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71 | ||
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72 | dates = [(dt+timedelta(x)).strftime('%Y/%m/%d') for x in range(20)] | |
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73 | ||
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74 | p = multiprocessing.Pool(4) | |
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75 | p.map(main, dates) | |
|
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93 | if __name__ == '__main__': | |
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94 | parser = argparse.ArgumentParser(description='Set number of parallel processes') | |
|
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95 | parser.add_argument('--nProcess', default=1, type=int) | |
|
|
96 | args = parser.parse_args() | |
|
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97 | multiSchain(fiber, nProcess=args.nProcess, startDate='2016/08/19', endDate='2016/08/19') | |
| @@ -1,58 +1,58 | |||
|
|
1 | 1 | #!/usr/bin/env python |
|
|
2 | 2 | ''' |
|
|
3 | 3 | Created on Jul 7, 2014 |
|
|
4 | 4 | |
|
|
5 | 5 | @author: roj-idl71 |
|
|
6 | 6 | ''' |
|
|
7 | 7 | import os, sys |
|
|
8 | 8 | |
|
|
9 | 9 | from schainpy.controller import Project |
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10 | 10 | |
|
|
11 | 11 | if __name__ == '__main__': |
|
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12 | 12 | desc = "Segundo Test" |
|
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13 | 13 | |
|
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14 | 14 | controllerObj = Project() |
|
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15 | 15 | controllerObj.setup(id='191', name='test01', description=desc) |
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16 | 16 | |
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17 | 17 | proc1 = controllerObj.addProcUnit(name='ReceiverData') |
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18 | 18 | proc1.addParameter(name='realtime', value='0', format='bool') |
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19 |
proc1.addParameter(name='plottypes', value='rti,coh,phase |
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|
19 | proc1.addParameter(name='plottypes', value='rti,coh,phase', format='str') | |
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20 | 20 | proc1.addParameter(name='throttle', value='10', format='int') |
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21 |
proc1.addParameter(name=' |
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21 | # proc1.addParameter(name='server', value='tcp://10.10.10.82:7000', format='str') | |
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22 | 22 | ## TODO Agregar direccion de server de publicacion a graficos como variable |
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23 | 23 | |
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24 | 24 | op1 = proc1.addOperation(name='PlotRTIData', optype='other') |
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25 | 25 | op1.addParameter(name='wintitle', value='Julia 150Km', format='str') |
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26 | 26 | op1.addParameter(name='save', value='/home/nanosat/Pictures', format='str') |
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27 | 27 | op1.addParameter(name='show', value='0', format='bool') |
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28 | 28 | op1.addParameter(name='colormap', value='jet', format='str') |
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29 | 29 | # |
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30 | 30 | op2 = proc1.addOperation(name='PlotCOHData', optype='other') |
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31 | 31 | op2.addParameter(name='wintitle', value='Julia 150Km', format='str') |
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32 | 32 | op2.addParameter(name='save', value='/home/nanosat/Pictures', format='str') |
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33 | 33 | op2.addParameter(name='colormap', value='jet', format='str') |
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34 | 34 | op2.addParameter(name='show', value='0', format='bool') |
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35 | # # | |
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35 | # # # | |
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36 | 36 | op6 = proc1.addOperation(name='PlotPHASEData', optype='other') |
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37 | 37 | op6.addParameter(name='wintitle', value='Julia 150Km', format='str') |
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38 | 38 | op6.addParameter(name='save', value='/home/nanosat/Pictures', format='str') |
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39 | 39 | op6.addParameter(name='show', value='1', format='bool') |
|
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40 | # | |
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41 | # proc2 = controllerObj.addProcUnit(name='ReceiverData') | |
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|
42 | # proc2.addParameter(name='server', value='juanca', format='str') | |
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43 | # proc2.addParameter(name='plottypes', value='snr,dop', format='str') | |
|
|
44 | # | |
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|
45 | op3 = proc1.addOperation(name='PlotSNRData', optype='other') | |
|
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46 | op3.addParameter(name='wintitle', value='Julia 150Km', format='str') | |
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47 | op3.addParameter(name='save', value='/home/nanosat/Pictures', format='str') | |
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48 | op3.addParameter(name='show', value='0', format='bool') | |
|
|
49 | # | |
|
|
50 | op4 = proc1.addOperation(name='PlotDOPData', optype='other') | |
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51 | op4.addParameter(name='wintitle', value='Julia 150Km', format='str') | |
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52 | op4.addParameter(name='save', value='/home/nanosat/Pictures', format='str') | |
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53 | op4.addParameter(name='show', value='0', format='bool') | |
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54 | op4.addParameter(name='colormap', value='jet', format='str') | |
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40 | # # | |
|
|
41 | # # proc2 = controllerObj.addProcUnit(name='ReceiverData') | |
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42 | # # proc2.addParameter(name='server', value='juanca', format='str') | |
|
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43 | # # proc2.addParameter(name='plottypes', value='snr,dop', format='str') | |
|
|
44 | # # | |
|
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45 | # op3 = proc1.addOperation(name='PlotSNRData', optype='other') | |
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46 | # op3.addParameter(name='wintitle', value='Julia 150Km', format='str') | |
|
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47 | # op3.addParameter(name='save', value='/home/nanosat/Pictures', format='str') | |
|
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48 | # op3.addParameter(name='show', value='0', format='bool') | |
|
|
49 | # # | |
|
|
50 | # op4 = proc1.addOperation(name='PlotDOPData', optype='other') | |
|
|
51 | # op4.addParameter(name='wintitle', value='Julia 150Km', format='str') | |
|
|
52 | # op4.addParameter(name='save', value='/home/nanosat/Pictures', format='str') | |
|
|
53 | # op4.addParameter(name='show', value='0', format='bool') | |
|
|
54 | # op4.addParameter(name='colormap', value='jet', format='str') | |
|
|
55 | 55 | |
|
|
56 | 56 | |
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57 | 57 | |
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|
58 | 58 | controllerObj.start() |
| @@ -1,1 +1,1 | |||
|
|
1 |
<Project description="HF_EXAMPLE" id="191" name="test01"><ReadUnit datatype="SpectraReader" id="1911" inputId="0" name="SpectraReader"><Operation id="19111" name="run" priority="1" type="self"><Parameter format="str" id="191111" name="datatype" value="SpectraReader" /><Parameter format="str" id="191112" name="path" value="/home/nanosat/data/ |
|
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|
1 | <Project description="HF_EXAMPLE" id="191" name="test01"><ReadUnit datatype="SpectraReader" id="1911" inputId="0" name="SpectraReader"><Operation id="19111" name="run" priority="1" type="self"><Parameter format="str" id="191111" name="datatype" value="SpectraReader" /><Parameter format="str" id="191112" name="path" value="/home/nanosat/data/sp1_f0" /><Parameter format="date" id="191113" name="startDate" value="2017/01/28" /><Parameter format="date" id="191114" name="endDate" value="2017/01/28" /><Parameter format="time" id="191115" name="startTime" value="00:00:00" /><Parameter format="time" id="191116" name="endTime" value="23:59:59" /><Parameter format="int" id="191118" name="cursor" value="28" /><Parameter format="int" id="191119" name="skip" value="22" /><Parameter format="int" id="191120" name="walk" value="1" /><Parameter format="int" id="191121" name="verbose" value="1" /><Parameter format="int" id="191122" name="online" value="0" /></Operation></ReadUnit><ProcUnit datatype="ParametersProc" id="1913" inputId="1911" name="ParametersProc"><Operation id="19131" name="run" priority="1" type="self" /><Operation id="19132" name="SpectralMoments" priority="2" type="other" /><Operation id="19133" name="PublishData" priority="3" type="other"><Parameter format="int" id="191331" name="zeromq" value="1" /><Parameter format="bool" id="191332" name="verbose" value="0" /><Parameter format="int" id="191333" name="delay" value="0" /></Operation></ProcUnit><ProcUnit datatype="Spectra" id="1912" inputId="1911" name="SpectraProc"><Operation id="19121" name="run" priority="1" type="self" /></ProcUnit></Project> No newline at end of file | |
| @@ -1,48 +1,49 | |||
|
|
1 | 1 | ''' |
|
|
2 | 2 | Created on Jul 16, 2014 |
|
|
3 | 3 | |
|
|
4 | 4 | @author: Miguel Urco |
|
|
5 | 5 | ''' |
|
|
6 | 6 | |
|
|
7 | 7 | from schainpy import __version__ |
|
|
8 | 8 | from setuptools import setup, Extension |
|
|
9 | 9 | |
|
|
10 | 10 | setup(name="schainpy", |
|
|
11 | 11 | version=__version__, |
|
|
12 | 12 | description="Python tools to read, write and process Jicamarca data", |
|
|
13 | 13 | author="Miguel Urco", |
|
|
14 | 14 | author_email="miguel.urco@jro.igp.gob.pe", |
|
|
15 | 15 | url="http://jro.igp.gob.pe", |
|
|
16 | 16 | packages = {'schainpy', |
|
|
17 | 17 | 'schainpy.model', |
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18 | 18 | 'schainpy.model.data', |
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|
19 | 19 | 'schainpy.model.graphics', |
|
|
20 | 20 | 'schainpy.model.io', |
|
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21 | 21 | 'schainpy.model.proc', |
|
|
22 | 22 | 'schainpy.model.serializer', |
|
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23 | 23 | 'schainpy.model.utils', |
|
|
24 | 24 | 'schainpy.gui', |
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25 | 25 | 'schainpy.gui.figures', |
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26 | 26 | 'schainpy.gui.viewcontroller', |
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27 | 27 | 'schainpy.gui.viewer', |
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28 | 28 | 'schainpy.gui.viewer.windows'}, |
|
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29 | 29 | ext_package='schainpy', |
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|
30 | 30 | py_modules=[''], |
|
|
31 | 31 | package_data={'': ['schain.conf.template'], |
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|
32 | 32 | 'schainpy.gui.figures': ['*.png','*.jpg'], |
|
|
33 | 33 | }, |
|
|
34 | 34 | include_package_data=False, |
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35 | 35 | scripts =['schainpy/gui/schainGUI', |
|
|
36 | 36 | 'schainpy/scripts/schain'], |
|
|
37 | 37 | ext_modules=[Extension("cSchain", ["schainpy/model/proc/extensions.c"])], |
|
|
38 | 38 | install_requires=[ |
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39 | 39 | "scipy >= 0.14.0", |
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40 | 40 | "h5py >= 2.2.1", |
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41 | 41 | "matplotlib >= 1.4.2", |
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42 | 42 | "pyfits >= 3.4", |
|
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43 | 43 | "numpy >= 1.11.2", |
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44 | 44 | "paramiko >= 2.1.2", |
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45 | 45 | "paho-mqtt >= 1.2", |
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46 | 46 | "zmq", |
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47 | "fuzzywuzzy" | |
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47 | 48 | ], |
|
|
48 | 49 | ) |
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