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1 | This software, unless otherwise noted, is licensed under the BSD 3-clause. | |
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2 | ||
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3 | Copyright (c) 2012-2020 Jicamarca Radio Observatory | |
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4 | ||
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5 | Redistribution and use in source and binary forms, with or without | |
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6 | modification, are permitted provided that the following conditions are met: | |
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7 | ||
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8 | * Redistributions of source code must retain the above copyright notice, this | |
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9 | list of conditions and the following disclaimer. | |
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10 | ||
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11 | * Redistributions in binary form must reproduce the above copyright notice, | |
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12 | this list of conditions and the following disclaimer in the documentation | |
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13 | and/or other materials provided with the distribution. | |
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14 | ||
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15 | * Neither the name of the copyright holder nor the names of its | |
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16 | contributors may be used to endorse or promote products derived from | |
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17 | this software without specific prior written permission. | |
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18 | ||
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19 | THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" | |
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20 | AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE | |
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21 | IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE | |
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22 | DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE | |
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23 | FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL | |
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24 | DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR | |
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25 | SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER | |
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26 | CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, | |
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27 | OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE | |
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28 | OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. | |
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1 | #include <Python.h> | |
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2 | #include <numpy/arrayobject.h> | |
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3 | #include <math.h> | |
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4 | ||
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5 | ||
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6 | static PyObject *hildebrand_sekhon(PyObject *self, PyObject *args) { | |
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7 | double navg; | |
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8 | PyObject *data_obj, *data_array; | |
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9 | ||
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10 | if (!PyArg_ParseTuple(args, "Od", &data_obj, &navg)) { | |
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11 | return NULL; | |
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12 | } | |
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13 | ||
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14 | data_array = PyArray_FROM_OTF(data_obj, NPY_FLOAT64, NPY_IN_ARRAY); | |
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15 | ||
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16 | if (data_array == NULL) { | |
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17 | Py_XDECREF(data_array); | |
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18 | Py_XDECREF(data_obj); | |
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19 | return NULL; | |
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20 | } | |
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21 | double *sortdata = (double*)PyArray_DATA(data_array); | |
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22 | int lenOfData = (int)PyArray_SIZE(data_array) ; | |
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23 | double nums_min = lenOfData*0.2; | |
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24 | if (nums_min <= 5) nums_min = 5; | |
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25 | double sump = 0; | |
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26 | double sumq = 0; | |
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27 | long j = 0; | |
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28 | int cont = 1; | |
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29 | double rtest = 0; | |
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30 | while ((cont == 1) && (j < lenOfData)) { | |
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31 | sump = sump + sortdata[j]; | |
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32 | sumq = sumq + pow(sortdata[j], 2); | |
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33 | if (j > nums_min) { | |
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34 | rtest = (double)j/(j-1) + 1/navg; | |
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35 | if ((sumq*j) > (rtest*pow(sump, 2))) { | |
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36 | j = j - 1; | |
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37 | sump = sump - sortdata[j]; | |
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38 | sumq = sumq - pow(sortdata[j],2); | |
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39 | cont = 0; | |
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40 | } | |
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41 | } | |
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42 | j = j + 1; | |
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43 | } | |
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44 | ||
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45 | double lnoise = sump / j; | |
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46 | ||
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47 | Py_DECREF(data_array); | |
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48 | ||
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49 | // return PyLong_FromLong(lnoise); | |
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50 | return PyFloat_FromDouble(lnoise); | |
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51 | } | |
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52 | ||
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53 | ||
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54 | static PyMethodDef noiseMethods[] = { | |
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55 | { "hildebrand_sekhon", hildebrand_sekhon, METH_VARARGS, "Get noise with hildebrand_sekhon algorithm" }, | |
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56 | { NULL, NULL, 0, NULL } | |
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57 | }; | |
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58 | ||
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59 | #if PY_MAJOR_VERSION >= 3 | |
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60 | ||
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61 | static struct PyModuleDef noisemodule = { | |
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62 | PyModuleDef_HEAD_INIT, | |
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63 | "_noise", | |
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64 | "Get noise with hildebrand_sekhon algorithm", | |
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65 | -1, | |
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66 | noiseMethods | |
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67 | }; | |
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68 | ||
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69 | #endif | |
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70 | ||
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71 | #if PY_MAJOR_VERSION >= 3 | |
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72 | PyMODINIT_FUNC PyInit__noise(void) { | |
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73 | Py_Initialize(); | |
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74 | import_array(); | |
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75 | return PyModule_Create(&noisemodule); | |
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76 | } | |
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77 | #else | |
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78 | PyMODINIT_FUNC init_noise() { | |
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79 | Py_InitModule("_noise", noiseMethods); | |
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80 | import_array(); | |
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81 | } | |
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82 | #endif | |
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100755 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100755 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644, binary diff hidden |
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100755 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100755 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100755 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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|
1 | NO CONTENT: new file 100755 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100755 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: new file 100644, binary diff hidden |
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1 | NO CONTENT: new file 100644, binary diff hidden |
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|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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|
1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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1 | NO CONTENT: new file 100644 | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
| @@ -1,114 +1,102 | |||
|
|
1 | 1 | # Byte-compiled / optimized / DLL files |
|
|
2 | 2 | __pycache__/ |
|
|
3 | 3 | *.py[cod] |
|
|
4 | 4 | *$py.class |
|
|
5 | 5 | |
|
|
6 | 6 | # C extensions |
|
|
7 | 7 | *.so |
|
|
8 | 8 | |
|
|
9 | 9 | # Distribution / packaging |
|
|
10 | 10 | .Python |
|
|
11 | 11 | env/ |
|
|
12 | 12 | build/ |
|
|
13 | 13 | develop-eggs/ |
|
|
14 | 14 | dist/ |
|
|
15 | 15 | downloads/ |
|
|
16 | 16 | eggs/ |
|
|
17 | 17 | .eggs/ |
|
|
18 | 18 | lib/ |
|
|
19 | 19 | lib64/ |
|
|
20 | 20 | parts/ |
|
|
21 | 21 | sdist/ |
|
|
22 | 22 | var/ |
|
|
23 | 23 | wheels/ |
|
|
24 | 24 | *.egg-info/ |
|
|
25 | 25 | .installed.cfg |
|
|
26 | 26 | *.egg |
|
|
27 | 27 | |
|
|
28 | 28 | # PyInstaller |
|
|
29 | 29 | # Usually these files are written by a python script from a template |
|
|
30 | 30 | # before PyInstaller builds the exe, so as to inject date/other infos into it. |
|
|
31 | 31 | *.manifest |
|
|
32 | 32 | *.spec |
|
|
33 | 33 | |
|
|
34 | 34 | # Installer logs |
|
|
35 | 35 | pip-log.txt |
|
|
36 | 36 | pip-delete-this-directory.txt |
|
|
37 | 37 | |
|
|
38 | 38 | # Unit test / coverage reports |
|
|
39 | 39 | htmlcov/ |
|
|
40 | 40 | .tox/ |
|
|
41 | 41 | .coverage |
|
|
42 | 42 | .coverage.* |
|
|
43 | 43 | .cache |
|
|
44 | 44 | nosetests.xml |
|
|
45 | 45 | coverage.xml |
|
|
46 | 46 | *,cover |
|
|
47 | 47 | .hypothesis/ |
|
|
48 | 48 | |
|
|
49 | 49 | # Translations |
|
|
50 | 50 | *.mo |
|
|
51 | 51 | *.pot |
|
|
52 | 52 | |
|
|
53 | 53 | # Django stuff: |
|
|
54 | 54 | *.log |
|
|
55 | 55 | local_settings.py |
|
|
56 | 56 | |
|
|
57 | 57 | # Flask stuff: |
|
|
58 | 58 | instance/ |
|
|
59 | 59 | .webassets-cache |
|
|
60 | 60 | |
|
|
61 | 61 | # Scrapy stuff: |
|
|
62 | 62 | .scrapy |
|
|
63 | 63 | |
|
|
64 | 64 | # Sphinx documentation |
|
|
65 | 65 | docs/_build/ |
|
|
66 | 66 | |
|
|
67 | 67 | # PyBuilder |
|
|
68 | 68 | target/ |
|
|
69 | 69 | |
|
|
70 | 70 | # Jupyter Notebook |
|
|
71 | 71 | .ipynb_checkpoints |
|
|
72 | 72 | |
|
|
73 | 73 | # pyenv |
|
|
74 | 74 | .python-version |
|
|
75 | 75 | |
|
|
76 | 76 | # celery beat schedule file |
|
|
77 | 77 | celerybeat-schedule |
|
|
78 | 78 | |
|
|
79 | 79 | # SageMath parsed files |
|
|
80 | 80 | *.sage.py |
|
|
81 | 81 | |
|
|
82 | 82 | # dotenv |
|
|
83 | 83 | .env |
|
|
84 | 84 | |
|
|
85 | 85 | # virtualenv |
|
|
86 | 86 | .venv |
|
|
87 | 87 | venv/ |
|
|
88 | 88 | ENV/ |
|
|
89 | 89 | |
|
|
90 | 90 | # Spyder project settings |
|
|
91 | 91 | .spyderproject |
|
|
92 | 92 | .spyproject |
|
|
93 | 93 | |
|
|
94 | 94 | # Rope project settings |
|
|
95 | 95 | .ropeproject |
|
|
96 | 96 | |
|
|
97 | 97 | # mkdocs documentation |
|
|
98 | 98 | /site |
|
|
99 | 99 | |
|
|
100 | 100 | # eclipse |
|
|
101 | 101 | .project |
|
|
102 | 102 | .pydevproject |
|
|
103 | # vscode | |
|
|
104 | ||
|
|
105 | .vscode | |
|
|
106 | ||
|
|
107 | schaingui/node_modules/ | |
|
|
108 | schainpy/scripts/ | |
|
|
109 | .svn/ | |
|
|
110 | *.png | |
|
|
111 | *.pyc | |
|
|
112 | .vscode | |
|
|
113 | trash | |
|
|
114 | *.log | |
| @@ -1,119 +1,141 | |||
|
|
1 |
|
|
|
|
1 | # CHANGELOG | |
|
|
2 | 2 | |
|
|
3 |
## |
|
|
|
4 | * Python 3.x compatible | |
|
|
5 | * New architecture with multiprocessing and IPC communication | |
|
|
6 | * Add @MPDecorator for multiprocessing Units and Operations | |
|
|
3 | ## 3.0.0 | |
|
|
4 | ||
|
|
5 | * Python 3.x & 2.X compatible | |
|
|
6 | * New architecture with multiprocessing support | |
|
|
7 | * Add @MPDecorator for multiprocessing Operations (Plots, Writers and Publishers) | |
|
|
7 | 8 | * Added new type of operation `external` for non-locking operations |
|
|
8 | 9 | * New plotting architecture with buffering/throttle capabilities to speed up plots |
|
|
10 | * Clean controller to optimize scripts (format & optype are no longer required) | |
|
|
11 | * Replace `ParamReader` and `ParamWriter` with new flexible `HDFReader` and `HDFWriter` | |
|
|
12 | * New GUI with dynamic load of Units and operations (use Kivy framework) | |
|
|
13 | * Clean code | |
|
|
14 | ||
|
|
15 | ## 2.3 | |
|
|
9 | 16 | |
|
|
10 | ### 2.3 | |
|
|
11 | 17 | * Added support for Madrigal formats (reading/writing). |
|
|
12 | 18 | * Added support for reading BLTR parameters (*.sswma). |
|
|
13 | 19 | * Added support for reading Julia format (*.dat). |
|
|
14 | 20 | * Added high order function `MPProject` for multiprocessing scripts. |
|
|
15 | 21 | * Added two new Processing Units `PublishData` and `ReceiverData` for receiving and sending dataOut through multiple ways (tcp, ipc, inproc). |
|
|
16 | 22 | * Added a new graphics Processing Unit `PlotterReceiver`. It is decoupled from normal processing sequence with support for data generated by multiprocessing scripts. |
|
|
17 | 23 | * Added support for sending realtime graphic to web server. |
|
|
18 |
* GUI command `schain` is now `schainGUI`. |
|
|
|
19 |
* Added a CLI tool named `schain`. |
|
|
|
20 |
|
|
|
|
21 |
|
|
|
|
22 |
|
|
|
|
24 | * GUI command `schain` is now `schainGUI`. | |
|
|
25 | * Added a CLI tool named `schain`. | |
|
|
26 | * Scripts templates can be now generated with `schain generate`. | |
|
|
27 | * Now it is possible to search Processing Units and Operations with `schain search [module]` to get the right name and its allowed parameters. | |
|
|
28 | * `schain xml` to run xml scripts. | |
|
|
23 | 29 | * Added suggestions when parameters are poorly written. |
|
|
24 | 30 | * `Controller.start()` now runs in a different process than the process calling it. |
|
|
25 | 31 | * Added `schainpy.utils.log` for log standarization. |
|
|
26 | 32 | * Running script on online mode no longer ignores date and hour. Issue #1109. |
|
|
27 | 33 | * Added support for receving voltage data directly from JARS (tcp, ipc). |
|
|
28 | 34 | * Updated README for MAC OS GUI installation. |
|
|
29 | 35 | * Setup now installs numpy. |
|
|
30 | 36 | |
|
|
31 |
## |
|
|
|
37 | ## 2.2.6 | |
|
|
38 | ||
|
|
32 | 39 | * Graphics generated by the GUI are now the same as generated by scripts. Issue #1074. |
|
|
33 | 40 | * Added support for C extensions. |
|
|
34 | 41 | * Function `hildebrand_sehkon` optimized with a C wrapper. |
|
|
35 | 42 | * Numpy version updated. |
|
|
36 | 43 | * Migration to GIT. |
|
|
37 | 44 | |
|
|
38 |
## |
|
|
|
45 | ## 2.2.5 | |
|
|
46 | ||
|
|
39 | 47 | * splitProfiles and combineProfiles modules were added to VoltageProc and Signal Chain GUI. |
|
|
40 | 48 | * nProfiles of USRP data (hdf5) is the number of profiles thera are in one second. |
|
|
41 | 49 | * jroPlotter works directly with data objects instead of dictionaries |
|
|
42 | 50 | * script "schain" was added to Signal Chain installer |
|
|
43 | 51 | |
|
|
44 |
## |
|
|
|
45 | * jroIO_usrp.py is update to read Sandra's data | |
|
|
52 | ## 2.2.4.1 | |
|
|
53 | ||
|
|
54 | * jroIO_usrp.py is update to read Sandra's data | |
|
|
46 | 55 | * decimation in Spectra and RTI plots is always enabled. |
|
|
47 | 56 | * time* window option added to GUI |
|
|
48 | 57 | |
|
|
49 |
## |
|
|
|
58 | ## 2.2.4 | |
|
|
59 | ||
|
|
50 | 60 | * jroproc_spectra_lags.py added to schainpy |
|
|
51 | 61 | * Bug fixed in schainGUI: ProcUnit was created with the same id in some cases. |
|
|
52 | 62 | * Bug fixed in jroHeaderIO: Header size validation. |
|
|
53 | 63 | |
|
|
54 |
## |
|
|
|
64 | ## 2.2.3.1 | |
|
|
65 | ||
|
|
55 | 66 | * Filtering block by time has been added. |
|
|
56 | 67 | * Bug fixed plotting RTI, CoherenceMap and others using xmin and xmax parameters. The first day worked |
|
|
57 | 68 | properly but the next days did not. |
|
|
58 | 69 | |
|
|
59 |
## |
|
|
|
70 | ## 2.2.3 | |
|
|
71 | ||
|
|
60 | 72 | * Bug fixed in GUI: Error getting(reading) Code value |
|
|
61 | 73 | * Bug fixed in GUI: Flip option always needs channelList field |
|
|
62 | 74 | * Bug fixed in jrodata: when one branch modified a value in "dataOut" (example: dataOut.code) this value |
|
|
63 | 75 | was modified for every branch (because this was a reference). It was modified in data.copy() |
|
|
64 | 76 | * Bug fixed in jroproc_voltage.profileSelector(): rangeList replaces to profileRangeList. |
|
|
65 | 77 | |
|
|
66 |
## |
|
|
|
78 | ## 2.2.2 | |
|
|
79 | ||
|
|
67 | 80 | * VoltageProc: ProfileSelector, Reshape, Decoder with nTxs!=1 and getblock=True was tested |
|
|
68 | 81 | * Rawdata and testRawdata.py added to Signal Chain project |
|
|
69 | 82 | |
|
|
70 |
## |
|
|
|
83 | ## 2.2.1 | |
|
|
84 | ||
|
|
71 | 85 | * Bugs fixed in GUI |
|
|
72 | 86 | * Views were improved in GUI |
|
|
73 | 87 | * Support to MST* ISR experiments |
|
|
74 | 88 | * Bug fixed getting noise using hyldebrant. (minimum number of points > 20%) |
|
|
75 | 89 | * handleError added to jroplotter.py |
|
|
76 | 90 | |
|
|
77 |
## |
|
|
|
91 | ## 2.2.0 | |
|
|
92 | ||
|
|
78 | 93 | * GUI: use of external plotter |
|
|
79 | 94 | * Compatible with matplotlib 1.5.0 |
|
|
80 | 95 | |
|
|
81 |
## |
|
|
|
96 | ## 2.1.5 | |
|
|
97 | ||
|
|
82 | 98 | * serializer module added to Signal Chain |
|
|
83 | 99 | * jroplotter.py added to Signal Chain |
|
|
84 | 100 | |
|
|
85 |
## |
|
|
|
101 | ## 2.1.4.2 | |
|
|
102 | ||
|
|
86 | 103 | * A new Plotter Class was added |
|
|
87 | 104 | * Project.start() does not accept filename as a parameter anymore |
|
|
88 | 105 | |
|
|
89 |
## |
|
|
|
106 | ## 2.1.4.1 | |
|
|
107 | ||
|
|
90 | 108 | * Send notifications when an error different to ValueError is detected |
|
|
91 | 109 | |
|
|
92 |
## |
|
|
|
110 | ## 2.1.4 | |
|
|
111 | ||
|
|
93 | 112 | * Sending error notifications to signal chain administrator |
|
|
94 | 113 | * Login to email server added |
|
|
95 | 114 | |
|
|
96 |
## |
|
|
|
115 | ## 2.1.3.3 | |
|
|
116 | ||
|
|
97 | 117 | * Colored Button Icons were added to GUI |
|
|
98 | 118 | |
|
|
99 |
## |
|
|
|
119 | ## 2.1.3.2 | |
|
|
120 | ||
|
|
100 | 121 | * GUI: user interaction enhanced |
|
|
101 | 122 | * controller_api.py: Safe access to ControllerThead |
|
|
102 | 123 | |
|
|
103 |
## |
|
|
|
124 | ## 2.1.3.1 | |
|
|
125 | ||
|
|
104 | 126 | * GUI: every icon were resized |
|
|
105 | 127 | * jroproc_voltage.py: Print a message when "Read from code" option is selected and the code is not defined inside data file |
|
|
106 | 128 | |
|
|
107 |
## |
|
|
|
129 | ## 2.1.3 | |
|
|
130 | ||
|
|
108 | 131 | * jroplot_heispectra.py: SpectraHeisScope was not showing the right channels |
|
|
109 | * jroproc_voltage.py: Bug fixed selecting profiles (self.nProfiles took a wrong value), | |
|
|
110 | Bug fixed selecting heights by block (selecting profiles instead heights) | |
|
|
132 | * jroproc_voltage.py: Bug fixed selecting profiles (self.nProfiles took a wrong value), Bug fixed selecting heights by block (selecting profiles instead heights) | |
|
|
111 | 133 | * jroproc_voltage.py: New feature added: decoding data by block using FFT. |
|
|
112 | 134 | * jroIO_heispectra.py: Bug fixed in FitsReader. Using local Fits instance instead schainpy.mode.data.jrodata.Fits. |
|
|
113 | 135 | * jroIO_heispectra.py: Channel index list does not exist. |
|
|
114 | 136 | |
|
|
115 |
## |
|
|
|
116 | * jroutils_ftp.py: Bug fixed, Any error sending file stopped the Server Thread | |
|
|
117 |
|
|
|
|
137 | ## 2.1.2 | |
|
|
138 | ||
|
|
139 | * jroutils_ftp.py: Bug fixed, Any error sending file stopped the Server Thread Server thread opens and closes remote server each time file list is sent | |
|
|
118 | 140 | * jroplot_spectra.py: Noise path was not being created when noise data is saved. |
|
|
119 |
* jroIO_base.py: startTime can be greater than endTime. Example: SpreadF |
|
|
|
141 | * jroIO_base.py: startTime can be greater than endTime. Example: SpreadF | |
| @@ -1,155 +1,104 | |||
|
|
1 | 1 | # Signal Chain |
|
|
2 | 2 | |
|
|
3 | ## Introduction | |
|
|
3 | Signal Chain is a radar data processing library wich includes modules to read, | |
|
|
4 | and write different files formats, besides modules to process and visualize the | |
|
|
5 | data. | |
|
|
4 | 6 | |
|
|
5 | Signal Chain (SCh) is a radar data processing library developed using [Python](www.python.org) at JRO. SCh provides modules to read, write, process and plot data. | |
|
|
7 | ## Dependencies | |
|
|
6 | 8 | |
|
|
7 | ## Installation | |
|
|
8 | ||
|
|
9 | Install system dependencies, clone the latest version from [here](http://jro-dev.igp.gob.pe/rhodecode/schain/) and install it as a normal python package. | |
|
|
9 | - GCC (gcc or gfortran) | |
|
|
10 | - Python.h (python-dev or python-devel) | |
|
|
11 | - Python-TK (python-tk) | |
|
|
12 | - HDF5 libraries (libhdf5-dev) | |
|
|
10 | 13 | |
|
|
11 | ### Linux based system | |
|
|
12 | ``` | |
|
|
13 | $ sudo apt-get install python-pip python-dev gfortran libpng-dev freetype* libblas-dev liblapack-dev libatlas-base-dev python-qt4 python-tk libssl-dev libhdf5-dev | |
|
|
14 | $ git clone http://jro-dev.igp.gob.pe/rhodecode/schain/ | |
|
|
15 | $ cd schain | |
|
|
16 | $ sudo pip install ./ | |
|
|
17 | ||
|
|
18 | ``` | |
|
|
14 | ## Installation | |
|
|
19 | 15 | |
|
|
20 | ### MAC Os | |
|
|
21 | ``` | |
|
|
22 | $ brew install python | |
|
|
23 | $ brew install cartr/qt4/pyqt | |
|
|
24 | $ git clone http://jro-dev.igp.gob.pe/rhodecode/schain/ | |
|
|
25 | $ cd schain | |
|
|
26 | $ pip install ./ | |
|
|
27 | ``` | |
|
|
16 | To get started the easiest way to install it is through | |
|
|
17 | [PyPI](https://pypi.org/project/schainpy/) with pip. We strongly recommend to | |
|
|
18 | use an virtual environment like virtualenv or anaconda. | |
|
|
28 | 19 | |
|
|
29 | **It is recommended to install schain in a virtual environment** | |
|
|
30 | ``` | |
|
|
31 | $ virtualenv /path/to/virtual | |
|
|
32 | $ source /path/to/virtual/bin/activate | |
|
|
33 | (virtual) $ cd schain | |
|
|
34 | (virtual) $ pip install ./ | |
|
|
35 | (virtual) $ bash link_PyQt4.sh | |
|
|
20 | ```bash | |
|
|
21 | pip install schainpy | |
|
|
36 | 22 | ``` |
|
|
37 | 23 | |
|
|
38 | ### Docker | |
|
|
24 | ### From source | |
|
|
39 | 25 | |
|
|
40 | Download Dockerfile from the repository, and create a docker image | |
|
|
26 | First, ensure that you have the above-listed dependencies installed, then clone | |
|
|
27 | the repository and install as normal python package: | |
|
|
41 | 28 | |
|
|
29 | ```bash | |
|
|
30 | git clone https://github.com/JRO-Peru/schainpy.git | |
|
|
31 | cd schain | |
|
|
32 | git checkout `branch-name` (optional) | |
|
|
33 | sudo pip install ./ | |
|
|
42 | 34 | ``` |
|
|
43 | $ docker build -t schain . | |
|
|
44 | ``` | |
|
|
45 | ||
|
|
46 | You can run a container using an xml file or a schain script also you need to mount a volume for the data input and for the output files/plots | |
|
|
47 | ``` | |
|
|
48 | $ docker run -it --rm --volume /path/to/host/data:/data schain xml /data/test.xml | |
|
|
49 | $ docker run -it --rm --volume /path/to/host/data:/data --entrypoint /urs/local/bin/python schain /data/test.py | |
|
|
50 | ``` | |
|
|
51 | ||
|
|
52 | ## First Script | |
|
|
53 | ||
|
|
54 | Read Spectra data (.pdata) - remove dc - plot spectra & RTI | |
|
|
55 | ||
|
|
56 | Import SCh and creating a project | |
|
|
57 | ||
|
|
58 | ```python | |
|
|
59 | #!/usr/bin/python | |
|
|
60 | 35 | |
|
|
61 | from schainpy.controller import Project | |
|
|
62 | ||
|
|
63 | controller = Project() | |
|
|
64 | controller.setup(id = '100', | |
|
|
65 | name='test', | |
|
|
66 | description='Basic experiment') | |
|
|
36 | ### Using Docker | |
|
|
67 | 37 | |
|
|
38 | Download Dockerfile from the repository, and create a docker image: | |
|
|
68 | 39 | |
|
|
40 | ```bash | |
|
|
41 | docker build -t schain . | |
|
|
69 | 42 | ``` |
|
|
70 | 43 | |
|
|
71 | Adding read unit and operations | |
|
|
72 | ||
|
|
73 | ```python | |
|
|
74 | read_unit = controller.addReadUnit(datatype='Spectra', | |
|
|
75 | path='/path/to/pdata/', | |
|
|
76 | startDate='2014/01/31', | |
|
|
77 | endDate='2014/03/31', | |
|
|
78 | startTime='00:00:00', | |
|
|
79 | endTime='23:59:59', | |
|
|
80 | online=0, | |
|
|
81 | walk=0) | |
|
|
82 | ||
|
|
83 | proc_unit = controller.addProcUnit(datatype='Spectra', | |
|
|
84 | inputId=read_unit.getId()) | |
|
|
85 | ||
|
|
86 | op = proc_unit.addOperation(name='selectChannels') | |
|
|
87 | op.addParameter(name='channelList', value='0,1', format='intlist') | |
|
|
88 | ||
|
|
89 | op = proc_unit.addOperation(name='selectHeights') | |
|
|
90 | op.addParameter(name='minHei', value='80', format='float') | |
|
|
91 | op.addParameter(name='maxHei', value='200', format='float') | |
|
|
92 | ||
|
|
93 | op = proc_unit.addOperation(name='removeDC') | |
|
|
44 | You can run a container using an xml file or a schain script also you need to | |
|
|
45 | mount a volume for the data input and for the output files/plots: | |
|
|
94 | 46 | |
|
|
47 | ```bash | |
|
|
48 | docker run -it --rm --volume /path/to/host/data:/data schain xml /data/test.xml | |
|
|
49 | docker run -it --rm --volume /path/to/host/data:/data --entrypoint /urs/local/bin/python schain /data/test.py | |
|
|
95 | 50 | ``` |
|
|
96 | 51 | |
|
|
97 | Plotting data & start project | |
|
|
52 | ## CLI (command line interface) | |
|
|
98 | 53 | |
|
|
99 | ```python | |
|
|
100 | op = proc_unit.addOperation(name='SpectraPlot', optype='other') | |
|
|
101 | op.addParameter(name='id', value='1', format='int') | |
|
|
102 | op.addParameter(name='wintitle', value='Spectra', format='str') | |
|
|
54 | Signal Chain provides the following commands: | |
|
|
103 | 55 | |
|
|
104 | op = procUnitConfObj1.addOperation(name='RTIPlot', optype='other') | |
|
|
105 | op.addParameter(name='id', value='2', format='int') | |
|
|
106 | op.addParameter(name='wintitle', value='RTI', format='str') | |
|
|
56 | - schainGUI: Open the GUI | |
|
|
57 | - schain: Signal chain command line | |
|
|
107 | 58 | |
|
|
108 | controller.start() | |
|
|
109 | ||
|
|
110 | ``` | |
|
|
111 | ||
|
|
112 | Full script | |
|
|
59 | ## Example | |
|
|
113 | 60 | |
|
|
61 | Here you can find an script to read Spectra data (.pdata), remove dc and plot | |
|
|
62 | self-spectra & RTI: | |
|
|
114 | 63 | |
|
|
115 | 64 | ```python |
|
|
116 | 65 | #!/usr/bin/python |
|
|
117 | 66 | |
|
|
118 | 67 | from schainpy.controller import Project |
|
|
119 | 68 | |
|
|
120 |
|
|
|
|
121 | controller.setup(id = '100', | |
|
|
122 | name='test', | |
|
|
123 | description='Basic experiment') | |
|
|
124 | read_unit = controller.addReadUnit(datatype='Spectra', | |
|
|
125 | path='/path/to/pdata/', | |
|
|
126 | startDate='2014/01/31', | |
|
|
127 | endDate='2014/03/31', | |
|
|
128 | startTime='00:00:00', | |
|
|
129 | endTime='23:59:59', | |
|
|
130 | online=0, | |
|
|
131 | walk=0) | |
|
|
132 | ||
|
|
133 |
proc_unit = |
|
|
|
134 | inputId=read_unit.getId()) | |
|
|
69 | prj = Project() | |
|
|
70 | ||
|
|
71 | read_unit = prj.addReadUnit( | |
|
|
72 | datatype='Spectra', | |
|
|
73 | path='/path/to/pdata/', | |
|
|
74 | startDate='2014/01/31', | |
|
|
75 | endDate='2014/03/31', | |
|
|
76 | startTime='00:00:00', | |
|
|
77 | endTime='23:59:59', | |
|
|
78 | online=0, | |
|
|
79 | walk=0 | |
|
|
80 | ) | |
|
|
81 | ||
|
|
82 | proc_unit = prj.addProcUnit( | |
|
|
83 | datatype='Spectra', | |
|
|
84 | inputId=read_unit.getId() | |
|
|
85 | ) | |
|
|
135 | 86 | |
|
|
136 | 87 | op = proc_unit.addOperation(name='selectChannels') |
|
|
137 |
op.addParameter(name='channelList', value='0,1' |
|
|
|
88 | op.addParameter(name='channelList', value='0,1') | |
|
|
138 | 89 | |
|
|
139 | 90 | op = proc_unit.addOperation(name='selectHeights') |
|
|
140 |
op.addParameter(name='minHei', value='80' |
|
|
|
141 |
op.addParameter(name='maxHei', value='200' |
|
|
|
91 | op.addParameter(name='minHei', value='80') | |
|
|
92 | op.addParameter(name='maxHei', value='200') | |
|
|
142 | 93 | |
|
|
143 | 94 | op = proc_unit.addOperation(name='removeDC') |
|
|
144 | 95 | |
|
|
145 |
op = proc_unit.addOperation(name='SpectraPlot' |
|
|
|
146 | op.addParameter(name='id', value='6', format='int') | |
|
|
96 | op = proc_unit.addOperation(name='SpectraPlot') | |
|
|
147 | 97 | op.addParameter(name='wintitle', value='Spectra', format='str') |
|
|
148 | 98 | |
|
|
149 |
op = proc |
|
|
|
150 | op.addParameter(name='id', value='2', format='int') | |
|
|
99 | op = proc_unit.addOperation(name='RTIPlot') | |
|
|
151 | 100 | op.addParameter(name='wintitle', value='RTI', format='str') |
|
|
152 | 101 | |
|
|
153 |
|
|
|
|
102 | prj.start() | |
|
|
154 | 103 | |
|
|
155 | ``` No newline at end of file | |
|
|
104 | ``` | |
| @@ -1,7 +1,8 | |||
|
|
1 | ''' | |
|
|
2 | Created on Jul 3, 2018 | |
|
|
1 | """Signal chain python package""" | |
|
|
3 | 2 | |
|
|
4 | @author $Author$ | |
|
|
5 | @version $Id$ | |
|
|
6 | ''' | |
|
|
7 | __version__ = '3.0' | |
|
|
3 | try: | |
|
|
4 | from schainpy.controller import Project | |
|
|
5 | except: | |
|
|
6 | pass | |
|
|
7 | ||
|
|
8 | __version__ = '3.0.0b6' | |
| @@ -1,236 +1,238 | |||
|
|
1 | 1 | import click |
|
|
2 | import schainpy | |
|
|
3 | 2 | import subprocess |
|
|
4 | 3 | import os |
|
|
5 | 4 | import sys |
|
|
6 | 5 | import glob |
|
|
7 | save_stdout = sys.stdout | |
|
|
8 | sys.stdout = open('/dev/null', 'w') | |
|
|
9 | from multiprocessing import cpu_count | |
|
|
6 | import schainpy | |
|
|
10 | 7 | from schainpy.controller import Project |
|
|
11 | 8 | from schainpy.model import Operation, ProcessingUnit |
|
|
12 | 9 | from schainpy.utils import log |
|
|
13 | 10 | from importlib import import_module |
|
|
14 | 11 | from pydoc import locate |
|
|
15 | 12 | from fuzzywuzzy import process |
|
|
16 | 13 | from schainpy.cli import templates |
|
|
17 | 14 | import inspect |
|
|
18 | 15 | try: |
|
|
19 | 16 | from queue import Queue |
|
|
20 | 17 | except: |
|
|
21 | 18 | from Queue import Queue |
|
|
22 | sys.stdout = save_stdout | |
|
|
23 | 19 | |
|
|
24 | 20 | |
|
|
25 | 21 | def getProcs(): |
|
|
26 | 22 | modules = dir(schainpy.model) |
|
|
27 | 23 | procs = check_module(modules, 'processing') |
|
|
28 | 24 | try: |
|
|
29 | 25 | procs.remove('ProcessingUnit') |
|
|
30 | 26 | except Exception as e: |
|
|
31 | 27 | pass |
|
|
32 | 28 | return procs |
|
|
33 | 29 | |
|
|
34 | 30 | def getOperations(): |
|
|
35 | 31 | module = dir(schainpy.model) |
|
|
36 | 32 | noProcs = [x for x in module if not x.endswith('Proc')] |
|
|
37 | 33 | operations = check_module(noProcs, 'operation') |
|
|
38 | 34 | try: |
|
|
39 | 35 | operations.remove('Operation') |
|
|
40 | 36 | operations.remove('Figure') |
|
|
41 | 37 | operations.remove('Plot') |
|
|
42 | 38 | except Exception as e: |
|
|
43 | 39 | pass |
|
|
44 | 40 | return operations |
|
|
45 | 41 | |
|
|
46 | 42 | def getArgs(op): |
|
|
47 | 43 | module = locate('schainpy.model.{}'.format(op)) |
|
|
48 | ||
|
|
49 | if hasattr(module, '__attrs__'): | |
|
|
50 | args = module.__attrs__ | |
|
|
44 | try: | |
|
|
45 | obj = module(1, 2, 3, Queue()) | |
|
|
46 | except: | |
|
|
47 | obj = module() | |
|
|
48 | ||
|
|
49 | if hasattr(obj, '__attrs__'): | |
|
|
50 | args = obj.__attrs__ | |
|
|
51 | 51 | else: |
|
|
52 | args = inspect.getargspec(module.run).args | |
|
|
52 | if hasattr(obj, 'myrun'): | |
|
|
53 | args = inspect.getfullargspec(obj.myrun).args | |
|
|
54 | else: | |
|
|
55 | args = inspect.getfullargspec(obj.run).args | |
|
|
56 | ||
|
|
53 | 57 | try: |
|
|
54 | 58 | args.remove('self') |
|
|
55 | 59 | except Exception as e: |
|
|
56 | 60 | pass |
|
|
57 | 61 | try: |
|
|
58 | 62 | args.remove('dataOut') |
|
|
59 | 63 | except Exception as e: |
|
|
60 | 64 | pass |
|
|
61 | 65 | return args |
|
|
62 | 66 | |
|
|
63 | 67 | def getDoc(obj): |
|
|
64 | 68 | module = locate('schainpy.model.{}'.format(obj)) |
|
|
65 | 69 | try: |
|
|
66 |
obj = module(1,2,3,Queue() |
|
|
|
70 | obj = module(1, 2, 3, Queue()) | |
|
|
67 | 71 | except: |
|
|
68 | 72 | obj = module() |
|
|
69 | 73 | return obj.__doc__ |
|
|
70 | 74 | |
|
|
71 | 75 | def getAll(): |
|
|
72 | 76 | modules = getOperations() |
|
|
73 | 77 | modules.extend(getProcs()) |
|
|
74 | 78 | return modules |
|
|
75 | 79 | |
|
|
76 | 80 | |
|
|
77 | 81 | def print_version(ctx, param, value): |
|
|
78 | 82 | if not value or ctx.resilient_parsing: |
|
|
79 | 83 | return |
|
|
80 | 84 | click.echo(schainpy.__version__) |
|
|
81 | 85 | ctx.exit() |
|
|
82 | 86 | |
|
|
83 | 87 | |
|
|
84 | 88 | PREFIX = 'experiment' |
|
|
85 | 89 | |
|
|
86 | 90 | @click.command() |
|
|
87 | 91 | @click.option('--version', '-v', is_flag=True, callback=print_version, help='SChain version', type=str) |
|
|
88 | 92 | @click.argument('command', default='run', required=True) |
|
|
89 | 93 | @click.argument('nextcommand', default=None, required=False, type=str) |
|
|
90 | 94 | def main(command, nextcommand, version): |
|
|
91 | 95 | """COMMAND LINE INTERFACE FOR SIGNAL CHAIN - JICAMARCA RADIO OBSERVATORY V3.0\n |
|
|
92 |
Available commands |
|
|
|
96 | Available commands:\n | |
|
|
93 | 97 | xml: runs a schain XML generated file\n |
|
|
94 |
run: runs any python script |
|
|
|
98 | run: runs any python script'\n | |
|
|
95 | 99 | generate: generates a template schain script\n |
|
|
96 | 100 | list: return a list of available procs and operations\n |
|
|
97 | 101 | search: return avilable operations, procs or arguments of the given |
|
|
98 | 102 | operation/proc\n""" |
|
|
99 | 103 | if command == 'xml': |
|
|
100 | 104 | runFromXML(nextcommand) |
|
|
101 | 105 | elif command == 'generate': |
|
|
102 | 106 | generate() |
|
|
103 | 107 | elif command == 'test': |
|
|
104 | 108 | test() |
|
|
105 | 109 | elif command == 'run': |
|
|
106 | 110 | runschain(nextcommand) |
|
|
107 | 111 | elif command == 'search': |
|
|
108 | 112 | search(nextcommand) |
|
|
109 | 113 | elif command == 'list': |
|
|
110 | 114 | cmdlist(nextcommand) |
|
|
111 | 115 | else: |
|
|
112 | 116 | log.error('Command {} is not defined'.format(command)) |
|
|
113 | 117 | |
|
|
114 | 118 | |
|
|
115 | 119 | def check_module(possible, instance): |
|
|
116 | 120 | def check(x): |
|
|
117 | 121 | try: |
|
|
118 | 122 | instancia = locate('schainpy.model.{}'.format(x)) |
|
|
119 | 123 | ret = instancia.proc_type == instance |
|
|
120 | 124 | return ret |
|
|
121 | 125 | except Exception as e: |
|
|
122 | 126 | return False |
|
|
123 | 127 | clean = clean_modules(possible) |
|
|
124 | 128 | return [x for x in clean if check(x)] |
|
|
125 | 129 | |
|
|
126 | 130 | |
|
|
127 | 131 | def clean_modules(module): |
|
|
128 | 132 | noEndsUnder = [x for x in module if not x.endswith('__')] |
|
|
129 | 133 | noStartUnder = [x for x in noEndsUnder if not x.startswith('__')] |
|
|
130 | 134 | noFullUpper = [x for x in noStartUnder if not x.isupper()] |
|
|
131 | 135 | return noFullUpper |
|
|
132 | 136 | |
|
|
133 | 137 | def cmdlist(nextcommand): |
|
|
134 | 138 | if nextcommand is None: |
|
|
135 | 139 | log.error('Missing argument, available arguments: procs, operations', '') |
|
|
136 | 140 | elif nextcommand == 'procs': |
|
|
137 | 141 | procs = getProcs() |
|
|
138 | 142 | log.success( |
|
|
139 | 143 | 'Current ProcessingUnits are:\n {}'.format('\n '.join(procs)), '') |
|
|
140 | 144 | elif nextcommand == 'operations': |
|
|
141 | 145 | operations = getOperations() |
|
|
142 | 146 | log.success('Current Operations are:\n {}'.format( |
|
|
143 | 147 | '\n '.join(operations)), '') |
|
|
144 | 148 | else: |
|
|
145 | 149 | log.error('Wrong argument', '') |
|
|
146 | 150 | |
|
|
147 | 151 | def search(nextcommand): |
|
|
148 | 152 | if nextcommand is None: |
|
|
149 | 153 | log.error('There is no Operation/ProcessingUnit to search', '') |
|
|
150 | 154 | else: |
|
|
151 |
try: |
|
|
|
155 | try: | |
|
|
152 | 156 | args = getArgs(nextcommand) |
|
|
153 | 157 | doc = getDoc(nextcommand) |
|
|
154 | if len(args) == 0: | |
|
|
155 | log.success('\n{} has no arguments'.format(nextcommand), '') | |
|
|
156 |
|
|
|
|
157 | log.success('{}\n{}\n\narguments:\n {}'.format( | |
|
|
158 | nextcommand, doc, ', '.join(args)), '') | |
|
|
158 | log.success('{}\n{}\n\nparameters:\n {}'.format( | |
|
|
159 | nextcommand, doc, ', '.join(args)), '' | |
|
|
160 | ) | |
|
|
159 | 161 | except Exception as e: |
|
|
160 | 162 | log.error('Module `{}` does not exists'.format(nextcommand), '') |
|
|
161 | 163 | allModules = getAll() |
|
|
162 | 164 | similar = [t[0] for t in process.extract(nextcommand, allModules, limit=12) if t[1]>80] |
|
|
163 | 165 | log.success('Possible modules are: {}'.format(', '.join(similar)), '') |
|
|
164 | 166 | |
|
|
165 | 167 | def runschain(nextcommand): |
|
|
166 | 168 | if nextcommand is None: |
|
|
167 | 169 | currentfiles = glob.glob('./{}_*.py'.format(PREFIX)) |
|
|
168 | 170 | numberfiles = len(currentfiles) |
|
|
169 | 171 | if numberfiles > 1: |
|
|
170 | 172 | log.error('There is more than one file to run') |
|
|
171 | 173 | elif numberfiles == 1: |
|
|
172 | 174 | subprocess.call(['python ' + currentfiles[0]], shell=True) |
|
|
173 | 175 | else: |
|
|
174 | 176 | log.error('There is no file to run') |
|
|
175 | 177 | else: |
|
|
176 | 178 | try: |
|
|
177 | 179 | subprocess.call(['python ' + nextcommand], shell=True) |
|
|
178 | 180 | except Exception as e: |
|
|
179 | 181 | log.error("I cannot run the file. Does it exists?") |
|
|
180 | 182 | |
|
|
181 | 183 | |
|
|
182 | 184 | def basicInputs(): |
|
|
183 | 185 | inputs = {} |
|
|
184 | 186 | inputs['name'] = click.prompt( |
|
|
185 | 187 | 'Name of the project', default="project", type=str) |
|
|
186 | 188 | inputs['desc'] = click.prompt( |
|
|
187 | 189 | 'Enter a description', default="A schain project", type=str) |
|
|
188 | 190 | inputs['multiprocess'] = click.prompt( |
|
|
189 | 191 | '''Select data type: |
|
|
190 | 192 | |
|
|
191 | 193 | - Voltage (*.r): [1] |
|
|
192 | 194 | - Spectra (*.pdata): [2] |
|
|
193 | 195 | - Voltage and Spectra (*.r): [3] |
|
|
194 | 196 | |
|
|
195 | 197 | -->''', type=int) |
|
|
196 | 198 | inputs['path'] = click.prompt('Data path', default=os.getcwd( |
|
|
197 | 199 | ), type=click.Path(exists=True, resolve_path=True)) |
|
|
198 | 200 | inputs['startDate'] = click.prompt( |
|
|
199 | 201 | 'Start date', default='1970/01/01', type=str) |
|
|
200 | 202 | inputs['endDate'] = click.prompt( |
|
|
201 | 203 | 'End date', default='2018/12/31', type=str) |
|
|
202 | 204 | inputs['startHour'] = click.prompt( |
|
|
203 | 205 | 'Start hour', default='00:00:00', type=str) |
|
|
204 | 206 | inputs['endHour'] = click.prompt('End hour', default='23:59:59', type=str) |
|
|
205 | 207 | inputs['figpath'] = inputs['path'] + '/figs' |
|
|
206 | 208 | return inputs |
|
|
207 | 209 | |
|
|
208 | 210 | |
|
|
209 | 211 | def generate(): |
|
|
210 | 212 | inputs = basicInputs() |
|
|
211 | 213 | |
|
|
212 | 214 | if inputs['multiprocess'] == 1: |
|
|
213 | 215 | current = templates.voltage.format(**inputs) |
|
|
214 | 216 | elif inputs['multiprocess'] == 2: |
|
|
215 | 217 | current = templates.spectra.format(**inputs) |
|
|
216 | 218 | elif inputs['multiprocess'] == 3: |
|
|
217 | 219 | current = templates.voltagespectra.format(**inputs) |
|
|
218 | 220 | scriptname = '{}_{}.py'.format(PREFIX, inputs['name']) |
|
|
219 | 221 | script = open(scriptname, 'w') |
|
|
220 | 222 | try: |
|
|
221 | 223 | script.write(current) |
|
|
222 | 224 | log.success('Script {} generated'.format(scriptname)) |
|
|
223 | 225 | except Exception as e: |
|
|
224 | 226 | log.error('I cannot create the file. Do you have writing permissions?') |
|
|
225 | 227 | |
|
|
226 | 228 | |
|
|
227 | 229 | def test(): |
|
|
228 | 230 | log.warning('testing') |
|
|
229 | 231 | |
|
|
230 | 232 | |
|
|
231 | 233 | def runFromXML(filename): |
|
|
232 | 234 | controller = Project() |
|
|
233 | 235 | if not controller.readXml(filename): |
|
|
234 | 236 | return |
|
|
235 | 237 | controller.start() |
|
|
236 | 238 | return |
| This diff has been collapsed as it changes many lines, (929 lines changed) Show them Hide them | |||
| @@ -1,1295 +1,918 | |||
|
|
1 | ''' | |
|
|
2 | Updated on January , 2018, for multiprocessing purposes | |
|
|
3 | Author: Sergio Cortez | |
|
|
4 | Created on September , 2012 | |
|
|
5 | ''' | |
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6 | from platform import python_version | |
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1 | # Copyright (c) 2012-2020 Jicamarca Radio Observatory | |
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2 | # All rights reserved. | |
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3 | # | |
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4 | # Distributed under the terms of the BSD 3-clause license. | |
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5 | """API to create signal chain projects | |
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6 | ||
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7 | The API is provide through class: Project | |
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8 | """ | |
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9 | ||
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10 | import re | |
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7 | 11 | import sys |
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8 | 12 | import ast |
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9 | 13 | import datetime |
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10 | 14 | import traceback |
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11 | import math | |
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12 | 15 | import time |
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13 | import zmq | |
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14 |
from multiprocessing import Process, Queue |
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16 | import multiprocessing | |
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17 | from multiprocessing import Process, Queue | |
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15 | 18 | from threading import Thread |
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16 |
from xml.etree.ElementTree import ElementTree, Element, SubElement |
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17 | from xml.dom import minidom | |
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18 | ||
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19 | from xml.etree.ElementTree import ElementTree, Element, SubElement | |
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19 | 20 | |
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20 | 21 | from schainpy.admin import Alarm, SchainWarning |
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21 | 22 | from schainpy.model import * |
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22 | 23 | from schainpy.utils import log |
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23 | 24 | |
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25 | if 'darwin' in sys.platform and sys.version_info[0] == 3 and sys.version_info[1] > 7: | |
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26 | multiprocessing.set_start_method('fork') | |
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24 | 27 | |
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25 | 28 | DTYPES = { |
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26 | 29 | 'Voltage': '.r', |
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27 | 30 | 'Spectra': '.pdata' |
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28 | 31 | } |
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29 | 32 | |
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30 | 33 | |
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31 | 34 | def MPProject(project, n=cpu_count()): |
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32 | 35 | ''' |
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33 | 36 | Project wrapper to run schain in n processes |
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34 | 37 | ''' |
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35 | 38 | |
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36 | 39 | rconf = project.getReadUnitObj() |
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37 | 40 | op = rconf.getOperationObj('run') |
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38 | 41 | dt1 = op.getParameterValue('startDate') |
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39 | 42 | dt2 = op.getParameterValue('endDate') |
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40 | 43 | tm1 = op.getParameterValue('startTime') |
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41 | 44 | tm2 = op.getParameterValue('endTime') |
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42 | 45 | days = (dt2 - dt1).days |
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43 | 46 | |
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44 | 47 | for day in range(days + 1): |
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45 | 48 | skip = 0 |
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46 | 49 | cursor = 0 |
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47 | 50 | processes = [] |
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48 | 51 | dt = dt1 + datetime.timedelta(day) |
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49 | 52 | dt_str = dt.strftime('%Y/%m/%d') |
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50 | 53 | reader = JRODataReader() |
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51 | 54 | paths, files = reader.searchFilesOffLine(path=rconf.path, |
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52 | 55 | startDate=dt, |
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53 | 56 | endDate=dt, |
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54 | 57 | startTime=tm1, |
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55 | 58 | endTime=tm2, |
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56 | 59 | ext=DTYPES[rconf.datatype]) |
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57 | 60 | nFiles = len(files) |
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58 | 61 | if nFiles == 0: |
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59 | 62 | continue |
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60 | 63 | skip = int(math.ceil(nFiles / n)) |
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61 | 64 | while nFiles > cursor * skip: |
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62 | 65 | rconf.update(startDate=dt_str, endDate=dt_str, cursor=cursor, |
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63 | 66 | skip=skip) |
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64 | 67 | p = project.clone() |
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65 | 68 | p.start() |
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66 | 69 | processes.append(p) |
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67 | 70 | cursor += 1 |
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68 | 71 | |
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69 | 72 | def beforeExit(exctype, value, trace): |
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70 | 73 | for process in processes: |
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71 | 74 | process.terminate() |
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72 | 75 | process.join() |
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73 | 76 | print(traceback.print_tb(trace)) |
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74 | 77 | |
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75 | 78 | sys.excepthook = beforeExit |
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76 | 79 | |
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77 | 80 | for process in processes: |
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78 | 81 | process.join() |
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79 | 82 | process.terminate() |
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80 | 83 | |
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81 | 84 | time.sleep(3) |
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82 | 85 | |
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83 | 86 | def wait(context): |
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84 | 87 | |
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85 | 88 | time.sleep(1) |
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86 | 89 | c = zmq.Context() |
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87 | 90 | receiver = c.socket(zmq.SUB) |
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88 | 91 | receiver.connect('ipc:///tmp/schain_{}_pub'.format(self.id)) |
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89 | 92 | receiver.setsockopt(zmq.SUBSCRIBE, self.id.encode()) |
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90 | 93 | msg = receiver.recv_multipart()[1] |
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91 | 94 | context.terminate() |
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92 | 95 | |
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93 | 96 | class ParameterConf(): |
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94 | 97 | |
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95 | 98 | id = None |
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96 | 99 | name = None |
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97 | 100 | value = None |
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98 | 101 | format = None |
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99 | 102 | |
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100 | 103 | __formated_value = None |
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101 | 104 | |
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102 | 105 | ELEMENTNAME = 'Parameter' |
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103 | 106 | |
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104 | 107 | def __init__(self): |
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105 | 108 | |
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106 | 109 | self.format = 'str' |
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107 | 110 | |
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108 | 111 | def getElementName(self): |
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109 | 112 | |
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110 | 113 | return self.ELEMENTNAME |
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111 | 114 | |
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112 | 115 | def getValue(self): |
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113 | 116 | |
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114 | 117 | value = self.value |
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115 | 118 | format = self.format |
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116 | 119 | |
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117 | 120 | if self.__formated_value != None: |
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118 | 121 | |
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119 | 122 | return self.__formated_value |
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120 | 123 | |
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121 | 124 | if format == 'obj': |
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122 | 125 | return value |
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123 | 126 | |
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124 | 127 | if format == 'str': |
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125 | 128 | self.__formated_value = str(value) |
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126 | 129 | return self.__formated_value |
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127 | 130 | |
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128 | 131 | if value == '': |
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129 | 132 | raise ValueError('%s: This parameter value is empty' % self.name) |
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130 | 133 | |
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131 | 134 | if format == 'list': |
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132 | 135 | strList = [s.strip() for s in value.split(',')] |
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133 | 136 | self.__formated_value = strList |
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134 | 137 | |
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135 | 138 | return self.__formated_value |
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136 | 139 | |
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137 | 140 | if format == 'intlist': |
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138 | 141 | ''' |
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139 | 142 | Example: |
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140 | 143 | value = (0,1,2) |
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141 | 144 | ''' |
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142 | 145 | |
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143 | 146 | new_value = ast.literal_eval(value) |
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144 | 147 | |
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145 | 148 | if type(new_value) not in (tuple, list): |
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146 | 149 | new_value = [int(new_value)] |
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147 | 150 | |
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148 | 151 | self.__formated_value = new_value |
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149 | 152 | |
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150 | 153 | return self.__formated_value |
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151 | 154 | |
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152 | 155 | if format == 'floatlist': |
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153 | 156 | ''' |
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154 | 157 | Example: |
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155 | 158 | value = (0.5, 1.4, 2.7) |
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156 | 159 | ''' |
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157 | 160 | |
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158 | 161 | new_value = ast.literal_eval(value) |
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159 | 162 | |
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160 | 163 | if type(new_value) not in (tuple, list): |
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161 | 164 | new_value = [float(new_value)] |
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162 | 165 | |
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163 | 166 | self.__formated_value = new_value |
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164 | 167 | |
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165 | 168 | return self.__formated_value |
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166 | 169 | |
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167 | 170 | if format == 'date': |
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168 | 171 | strList = value.split('/') |
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169 | 172 | intList = [int(x) for x in strList] |
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170 | 173 | date = datetime.date(intList[0], intList[1], intList[2]) |
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171 | 174 | |
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172 | 175 | self.__formated_value = date |
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173 | 176 | |
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174 | 177 | return self.__formated_value |
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175 | 178 | |
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176 | 179 | if format == 'time': |
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177 | 180 | strList = value.split(':') |
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178 | 181 | intList = [int(x) for x in strList] |
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179 | 182 | time = datetime.time(intList[0], intList[1], intList[2]) |
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180 | 183 | |
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181 | 184 | self.__formated_value = time |
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182 | 185 | |
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183 | 186 | return self.__formated_value |
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184 | 187 | |
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185 | 188 | if format == 'pairslist': |
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186 | 189 | ''' |
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187 | 190 | Example: |
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188 | 191 | value = (0,1),(1,2) |
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189 | 192 | ''' |
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190 | 193 | |
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191 | 194 | new_value = ast.literal_eval(value) |
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192 | 195 | |
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193 | 196 | if type(new_value) not in (tuple, list): |
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194 | 197 | raise ValueError('%s has to be a tuple or list of pairs' % value) |
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195 | 198 | |
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196 | 199 | if type(new_value[0]) not in (tuple, list): |
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197 | 200 | if len(new_value) != 2: |
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198 | 201 | raise ValueError('%s has to be a tuple or list of pairs' % value) |
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199 | 202 | new_value = [new_value] |
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200 | 203 | |
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201 | 204 | for thisPair in new_value: |
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202 | 205 | if len(thisPair) != 2: |
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203 | 206 | raise ValueError('%s has to be a tuple or list of pairs' % value) |
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204 | 207 | |
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205 | 208 | self.__formated_value = new_value |
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206 | 209 | |
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207 | 210 | return self.__formated_value |
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208 | 211 | |
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209 | 212 | if format == 'multilist': |
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210 | 213 | ''' |
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211 | 214 | Example: |
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212 | 215 | value = (0,1,2),(3,4,5) |
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213 | 216 | ''' |
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214 | 217 | multiList = ast.literal_eval(value) |
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215 | 218 | |
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216 | 219 | if type(multiList[0]) == int: |
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217 | 220 | multiList = ast.literal_eval('(' + value + ')') |
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218 | 221 | |
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219 | 222 | self.__formated_value = multiList |
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220 | 223 | |
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221 | 224 | return self.__formated_value |
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222 | 225 | |
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223 | 226 | if format == 'bool': |
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224 | 227 | value = int(value) |
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225 | 228 | |
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226 | 229 | if format == 'int': |
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227 | 230 | value = float(value) |
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228 | 231 | |
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229 | 232 | format_func = eval(format) |
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230 | 233 | |
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231 | 234 | self.__formated_value = format_func(value) |
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232 | 235 | |
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233 | 236 | return self.__formated_value |
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234 | 237 | |
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235 | 238 | def updateId(self, new_id): |
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236 | 239 | |
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237 | 240 | self.id = str(new_id) |
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238 | 241 | |
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239 | 242 | def setup(self, id, name, value, format='str'): |
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240 | 243 | self.id = str(id) |
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241 | 244 | self.name = name |
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242 | 245 | if format == 'obj': |
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243 | 246 | self.value = value |
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244 | 247 | else: |
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245 | 248 | self.value = str(value) |
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246 | 249 | self.format = str.lower(format) |
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247 | 250 | |
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248 | 251 | self.getValue() |
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249 | 252 | |
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250 | 253 | return 1 |
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251 | 254 | |
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252 | 255 | def update(self, name, value, format='str'): |
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253 | 256 | |
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254 | 257 | self.name = name |
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255 | 258 | self.value = str(value) |
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256 | 259 | self.format = format |
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257 | 260 | |
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258 | 261 | def makeXml(self, opElement): |
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259 | 262 | if self.name not in ('queue',): |
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260 | 263 | parmElement = SubElement(opElement, self.ELEMENTNAME) |
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261 | 264 | parmElement.set('id', str(self.id)) |
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262 | 265 | parmElement.set('name', self.name) |
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263 | 266 | parmElement.set('value', self.value) |
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264 | 267 | parmElement.set('format', self.format) |
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265 | 268 | |
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266 | 269 | def readXml(self, parmElement): |
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267 | 270 | |
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268 | 271 | self.id = parmElement.get('id') |
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269 | 272 | self.name = parmElement.get('name') |
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270 | 273 | self.value = parmElement.get('value') |
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271 | 274 | self.format = str.lower(parmElement.get('format')) |
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272 | 275 | |
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273 | 276 | # Compatible with old signal chain version |
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274 | 277 | if self.format == 'int' and self.name == 'idfigure': |
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275 | 278 | self.name = 'id' |
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276 | 279 | |
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277 | 280 | def printattr(self): |
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278 | 281 | |
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279 | 282 | print('Parameter[%s]: name = %s, value = %s, format = %s, project_id = %s' % (self.id, self.name, self.value, self.format, self.project_id)) |
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280 | 283 | |
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281 | 284 | class OperationConf(): |
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282 | 285 | |
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283 | 286 | ELEMENTNAME = 'Operation' |
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284 | 287 | |
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285 | 288 | def __init__(self): |
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286 | 289 | |
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287 | 290 | self.id = '0' |
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288 | 291 | self.name = None |
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289 | 292 | self.priority = None |
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290 |
self. |
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291 | ||
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292 | def __getNewId(self): | |
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293 | ||
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294 | return int(self.id) * 10 + len(self.parmConfObjList) + 1 | |
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293 | self.parameters = {} | |
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294 | self.object = None | |
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295 | self.operations = [] | |
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295 | 296 | |
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296 | 297 | def getId(self): |
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298 | ||
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297 | 299 | return self.id |
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298 | 300 | |
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301 | def getNewId(self): | |
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302 | ||
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303 | return int(self.id) * 10 + len(self.operations) + 1 | |
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304 | ||
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299 | 305 | def updateId(self, new_id): |
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300 | 306 | |
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301 | 307 | self.id = str(new_id) |
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302 | 308 | |
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303 | 309 | n = 1 |
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304 |
for |
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305 | ||
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306 | idParm = str(int(new_id) * 10 + n) | |
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307 | parmObj.updateId(idParm) | |
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308 | ||
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310 | for conf in self.operations: | |
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311 | conf_id = str(int(new_id) * 10 + n) | |
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312 | conf.updateId(conf_id) | |
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309 | 313 | n += 1 |
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310 | 314 | |
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311 |
def get |
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312 | ||
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313 | return self.ELEMENTNAME | |
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314 | ||
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315 | def getParameterObjList(self): | |
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316 | ||
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317 | return self.parmConfObjList | |
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318 | ||
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319 | def getParameterObj(self, parameterName): | |
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315 | def getKwargs(self): | |
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320 | 316 | |
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321 | for parmConfObj in self.parmConfObjList: | |
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317 | params = {} | |
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322 | 318 | |
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323 | if parmConfObj.name != parameterName: | |
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324 | continue | |
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319 | for key, value in self.parameters.items(): | |
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320 | if value not in (None, '', ' '): | |
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321 | params[key] = value | |
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325 | 322 | |
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326 |
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323 | return params | |
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327 | 324 | |
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328 | return None | |
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325 | def update(self, **kwargs): | |
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329 | 326 | |
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330 | def getParameterObjfromValue(self, parameterValue): | |
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327 | for key, value in kwargs.items(): | |
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328 | self.addParameter(name=key, value=value) | |
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331 | 329 | |
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332 | for parmConfObj in self.parmConfObjList: | |
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330 | def addParameter(self, name, value, format=None): | |
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331 | ''' | |
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332 | ''' | |
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333 | 333 | |
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334 | if parmConfObj.getValue() != parameterValue: | |
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335 | continue | |
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334 | if isinstance(value, str) and re.search(r'(\d+/\d+/\d+)', value): | |
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335 | self.parameters[name] = datetime.date(*[int(x) for x in value.split('/')]) | |
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336 | elif isinstance(value, str) and re.search(r'(\d+:\d+:\d+)', value): | |
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337 | self.parameters[name] = datetime.time(*[int(x) for x in value.split(':')]) | |
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338 | else: | |
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339 | try: | |
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340 | self.parameters[name] = ast.literal_eval(value) | |
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341 | except: | |
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342 | if isinstance(value, str) and ',' in value: | |
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343 | self.parameters[name] = value.split(',') | |
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344 | else: | |
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345 | self.parameters[name] = value | |
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346 | ||
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347 | def getParameters(self): | |
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348 | ||
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349 | params = {} | |
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350 | for key, value in self.parameters.items(): | |
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351 | s = type(value).__name__ | |
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352 | if s == 'date': | |
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353 | params[key] = value.strftime('%Y/%m/%d') | |
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354 | elif s == 'time': | |
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355 | params[key] = value.strftime('%H:%M:%S') | |
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356 | else: | |
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357 | params[key] = str(value) | |
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336 | 358 | |
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337 |
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359 | return params | |
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338 | 360 | |
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339 | return None | |
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361 | def makeXml(self, element): | |
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340 | 362 | |
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341 | def getParameterValue(self, parameterName): | |
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363 | xml = SubElement(element, self.ELEMENTNAME) | |
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364 | for label in self.xml_labels: | |
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365 | xml.set(label, str(getattr(self, label))) | |
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342 | 366 | |
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343 |
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367 | for key, value in self.getParameters().items(): | |
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368 | xml_param = SubElement(xml, 'Parameter') | |
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369 | xml_param.set('name', key) | |
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370 | xml_param.set('value', value) | |
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344 | 371 | |
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345 | # if not parameterObj: | |
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346 | # return None | |
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372 | for conf in self.operations: | |
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373 | conf.makeXml(xml) | |
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347 | 374 | |
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348 | value = parameterObj.getValue() | |
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375 | def __str__(self): | |
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349 | 376 | |
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350 | return value | |
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377 | if self.ELEMENTNAME == 'Operation': | |
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378 | s = ' {}[id={}]\n'.format(self.name, self.id) | |
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379 | else: | |
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380 | s = '{}[id={}, inputId={}]\n'.format(self.name, self.id, self.inputId) | |
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351 | 381 | |
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352 | def getKwargs(self): | |
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382 | for key, value in self.parameters.items(): | |
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383 | if self.ELEMENTNAME == 'Operation': | |
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384 | s += ' {}: {}\n'.format(key, value) | |
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385 | else: | |
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386 | s += ' {}: {}\n'.format(key, value) | |
|
|
353 | 387 | |
|
|
354 | kwargs = {} | |
|
|
388 | for conf in self.operations: | |
|
|
389 | s += str(conf) | |
|
|
355 | 390 | |
|
|
356 | for parmConfObj in self.parmConfObjList: | |
|
|
357 | if self.name == 'run' and parmConfObj.name == 'datatype': | |
|
|
358 | continue | |
|
|
391 | return s | |
|
|
359 | 392 | |
|
|
360 | kwargs[parmConfObj.name] = parmConfObj.getValue() | |
|
|
393 | class OperationConf(ConfBase): | |
|
|
361 | 394 | |
|
|
362 | return kwargs | |
|
|
395 | ELEMENTNAME = 'Operation' | |
|
|
396 | xml_labels = ['id', 'name'] | |
|
|
363 | 397 | |
|
|
364 |
def setup(self, id, name, priority, |
|
|
|
398 | def setup(self, id, name, priority, project_id, err_queue): | |
|
|
365 | 399 | |
|
|
366 | 400 | self.id = str(id) |
|
|
367 | 401 | self.project_id = project_id |
|
|
368 | 402 | self.name = name |
|
|
369 |
self.type = |
|
|
|
370 | self.priority = priority | |
|
|
403 | self.type = 'other' | |
|
|
371 | 404 | self.err_queue = err_queue |
|
|
372 | self.lock = lock | |
|
|
373 | self.parmConfObjList = [] | |
|
|
374 | 405 | |
|
|
375 | def removeParameters(self): | |
|
|
406 | def readXml(self, element, project_id, err_queue): | |
|
|
376 | 407 | |
|
|
377 | for obj in self.parmConfObjList: | |
|
|
378 | del obj | |
|
|
379 | ||
|
|
380 | self.parmConfObjList = [] | |
|
|
381 | ||
|
|
382 | def addParameter(self, name, value, format='str'): | |
|
|
383 | ||
|
|
384 | if value is None: | |
|
|
385 | return None | |
|
|
386 | id = self.__getNewId() | |
|
|
387 | ||
|
|
388 | parmConfObj = ParameterConf() | |
|
|
389 | if not parmConfObj.setup(id, name, value, format): | |
|
|
390 | return None | |
|
|
391 | ||
|
|
392 | self.parmConfObjList.append(parmConfObj) | |
|
|
393 | ||
|
|
394 | return parmConfObj | |
|
|
395 | ||
|
|
396 | def changeParameter(self, name, value, format='str'): | |
|
|
397 | ||
|
|
398 | parmConfObj = self.getParameterObj(name) | |
|
|
399 | parmConfObj.update(name, value, format) | |
|
|
400 | ||
|
|
401 | return parmConfObj | |
|
|
402 | ||
|
|
403 | def makeXml(self, procUnitElement): | |
|
|
404 | ||
|
|
405 | opElement = SubElement(procUnitElement, self.ELEMENTNAME) | |
|
|
406 | opElement.set('id', str(self.id)) | |
|
|
407 | opElement.set('name', self.name) | |
|
|
408 | opElement.set('type', self.type) | |
|
|
409 | opElement.set('priority', str(self.priority)) | |
|
|
410 | ||
|
|
411 | for parmConfObj in self.parmConfObjList: | |
|
|
412 | parmConfObj.makeXml(opElement) | |
|
|
413 | ||
|
|
414 | def readXml(self, opElement, project_id): | |
|
|
415 | ||
|
|
416 | self.id = opElement.get('id') | |
|
|
417 | self.name = opElement.get('name') | |
|
|
418 | self.type = opElement.get('type') | |
|
|
419 | self.priority = opElement.get('priority') | |
|
|
408 | self.id = element.get('id') | |
|
|
409 | self.name = element.get('name') | |
|
|
410 | self.type = 'other' | |
|
|
420 | 411 | self.project_id = str(project_id) |
|
|
412 | self.err_queue = err_queue | |
|
|
421 | 413 | |
|
|
422 | # Compatible with old signal chain version | |
|
|
423 | # Use of 'run' method instead 'init' | |
|
|
424 | if self.type == 'self' and self.name == 'init': | |
|
|
425 | self.name = 'run' | |
|
|
426 | ||
|
|
427 | self.parmConfObjList = [] | |
|
|
428 | ||
|
|
429 | parmElementList = opElement.iter(ParameterConf().getElementName()) | |
|
|
430 | ||
|
|
431 | for parmElement in parmElementList: | |
|
|
432 | parmConfObj = ParameterConf() | |
|
|
433 | parmConfObj.readXml(parmElement) | |
|
|
434 | ||
|
|
435 | # Compatible with old signal chain version | |
|
|
436 | # If an 'plot' OPERATION is found, changes name operation by the value of its type PARAMETER | |
|
|
437 | if self.type != 'self' and self.name == 'Plot': | |
|
|
438 | if parmConfObj.format == 'str' and parmConfObj.name == 'type': | |
|
|
439 | self.name = parmConfObj.value | |
|
|
440 | continue | |
|
|
441 | ||
|
|
442 | self.parmConfObjList.append(parmConfObj) | |
|
|
443 | ||
|
|
444 | def printattr(self): | |
|
|
445 | ||
|
|
446 | print('%s[%s]: name = %s, type = %s, priority = %s, project_id = %s' % (self.ELEMENTNAME, | |
|
|
447 | self.id, | |
|
|
448 | self.name, | |
|
|
449 | self.type, | |
|
|
450 | self.priority, | |
|
|
451 | self.project_id)) | |
|
|
452 | ||
|
|
453 | for parmConfObj in self.parmConfObjList: | |
|
|
454 | parmConfObj.printattr() | |
|
|
414 | for elm in element.iter('Parameter'): | |
|
|
415 | self.addParameter(elm.get('name'), elm.get('value')) | |
|
|
455 | 416 | |
|
|
456 | 417 | def createObject(self): |
|
|
457 | 418 | |
|
|
458 | 419 | className = eval(self.name) |
|
|
459 | 420 | |
|
|
460 | if self.type == 'other': | |
|
|
461 | opObj = className() | |
|
|
462 | elif self.type == 'external': | |
|
|
421 | if 'Plot' in self.name or 'Writer' in self.name or 'Send' in self.name or 'print' in self.name: | |
|
|
463 | 422 | kwargs = self.getKwargs() |
|
|
464 |
opObj = className(self.id, self.id, self.project_id, self.err_queue, |
|
|
|
423 | opObj = className(self.id, self.id, self.project_id, self.err_queue, **kwargs) | |
|
|
465 | 424 | opObj.start() |
|
|
466 |
self. |
|
|
|
425 | self.type = 'external' | |
|
|
426 | else: | |
|
|
427 | opObj = className() | |
|
|
467 | 428 | |
|
|
429 | self.object = opObj | |
|
|
468 | 430 | return opObj |
|
|
469 | 431 | |
|
|
470 | class ProcUnitConf(): | |
|
|
432 | class ProcUnitConf(ConfBase): | |
|
|
471 | 433 | |
|
|
472 | 434 | ELEMENTNAME = 'ProcUnit' |
|
|
435 | xml_labels = ['id', 'inputId', 'name'] | |
|
|
473 | 436 | |
|
|
474 | def __init__(self): | |
|
|
475 | ||
|
|
476 | self.id = None | |
|
|
477 | self.datatype = None | |
|
|
478 | self.name = None | |
|
|
479 | self.inputId = None | |
|
|
480 | self.opConfObjList = [] | |
|
|
481 | self.procUnitObj = None | |
|
|
482 | self.opObjDict = {} | |
|
|
483 | ||
|
|
484 | def __getPriority(self): | |
|
|
485 | ||
|
|
486 | return len(self.opConfObjList) + 1 | |
|
|
487 | ||
|
|
488 | def __getNewId(self): | |
|
|
489 | ||
|
|
490 | return int(self.id) * 10 + len(self.opConfObjList) + 1 | |
|
|
491 | ||
|
|
492 | def getElementName(self): | |
|
|
493 | ||
|
|
494 | return self.ELEMENTNAME | |
|
|
495 | ||
|
|
496 | def getId(self): | |
|
|
497 | ||
|
|
498 | return self.id | |
|
|
499 | ||
|
|
500 | def updateId(self, new_id): | |
|
|
501 | ''' | |
|
|
502 | new_id = int(parentId) * 10 + (int(self.id) % 10) | |
|
|
503 | new_inputId = int(parentId) * 10 + (int(self.inputId) % 10) | |
|
|
504 | ||
|
|
505 | # If this proc unit has not inputs | |
|
|
506 | #if self.inputId == '0': | |
|
|
507 | #new_inputId = 0 | |
|
|
508 | ||
|
|
509 | n = 1 | |
|
|
510 | for opConfObj in self.opConfObjList: | |
|
|
511 | ||
|
|
512 | idOp = str(int(new_id) * 10 + n) | |
|
|
513 | opConfObj.updateId(idOp) | |
|
|
514 | ||
|
|
515 | n += 1 | |
|
|
516 | ||
|
|
517 | self.parentId = str(parentId) | |
|
|
518 | self.id = str(new_id) | |
|
|
519 | #self.inputId = str(new_inputId) | |
|
|
520 | ''' | |
|
|
521 | n = 1 | |
|
|
522 | ||
|
|
523 | def getInputId(self): | |
|
|
524 | ||
|
|
525 | return self.inputId | |
|
|
526 | ||
|
|
527 | def getOperationObjList(self): | |
|
|
528 | ||
|
|
529 | return self.opConfObjList | |
|
|
530 | ||
|
|
531 | def getOperationObj(self, name=None): | |
|
|
532 | ||
|
|
533 | for opConfObj in self.opConfObjList: | |
|
|
534 | ||
|
|
535 | if opConfObj.name != name: | |
|
|
536 | continue | |
|
|
537 | ||
|
|
538 | return opConfObj | |
|
|
539 | ||
|
|
540 | return None | |
|
|
541 | ||
|
|
542 | def getOpObjfromParamValue(self, value=None): | |
|
|
543 | ||
|
|
544 | for opConfObj in self.opConfObjList: | |
|
|
545 | if opConfObj.getParameterObjfromValue(parameterValue=value) != value: | |
|
|
546 | continue | |
|
|
547 | return opConfObj | |
|
|
548 | return None | |
|
|
549 | ||
|
|
550 | def getProcUnitObj(self): | |
|
|
551 | ||
|
|
552 | return self.procUnitObj | |
|
|
553 | ||
|
|
554 | def setup(self, project_id, id, name, datatype, inputId, err_queue, lock): | |
|
|
437 | def setup(self, project_id, id, name, datatype, inputId, err_queue): | |
|
|
555 | 438 | ''' |
|
|
556 | id sera el topico a publicar | |
|
|
557 | inputId sera el topico a subscribirse | |
|
|
558 | 439 | ''' |
|
|
559 | 440 | |
|
|
560 | # Compatible with old signal chain version | |
|
|
561 | 441 | if datatype == None and name == None: |
|
|
562 | 442 | raise ValueError('datatype or name should be defined') |
|
|
563 | 443 | |
|
|
564 | #Definir una condicion para inputId cuando sea 0 | |
|
|
565 | ||
|
|
566 | 444 | if name == None: |
|
|
567 | 445 | if 'Proc' in datatype: |
|
|
568 | 446 | name = datatype |
|
|
569 | 447 | else: |
|
|
570 | 448 | name = '%sProc' % (datatype) |
|
|
571 | 449 | |
|
|
572 | 450 | if datatype == None: |
|
|
573 | 451 | datatype = name.replace('Proc', '') |
|
|
574 | 452 | |
|
|
575 | 453 | self.id = str(id) |
|
|
576 | 454 | self.project_id = project_id |
|
|
577 | 455 | self.name = name |
|
|
578 | 456 | self.datatype = datatype |
|
|
579 | 457 | self.inputId = inputId |
|
|
580 | 458 | self.err_queue = err_queue |
|
|
581 |
self. |
|
|
|
582 |
self. |
|
|
|
583 | ||
|
|
584 | self.addOperation(name='run', optype='self') | |
|
|
585 | ||
|
|
586 | def removeOperations(self): | |
|
|
459 | self.operations = [] | |
|
|
460 | self.parameters = {} | |
|
|
587 | 461 | |
|
|
588 | for obj in self.opConfObjList: | |
|
|
589 | del obj | |
|
|
462 | def removeOperation(self, id): | |
|
|
590 | 463 | |
|
|
591 | self.opConfObjList = [] | |
|
|
592 |
self. |
|
|
|
464 | i = [1 if x.id==id else 0 for x in self.operations] | |
|
|
465 | self.operations.pop(i.index(1)) | |
|
|
593 | 466 | |
|
|
594 | def addParameter(self, **kwargs): | |
|
|
595 | ''' | |
|
|
596 | Add parameters to 'run' operation | |
|
|
597 | ''' | |
|
|
598 | opObj = self.opConfObjList[0] | |
|
|
467 | def getOperation(self, id): | |
|
|
599 | 468 | |
|
|
600 | opObj.addParameter(**kwargs) | |
|
|
601 | ||
|
|
602 |
return |
|
|
|
469 | for conf in self.operations: | |
|
|
470 | if conf.id == id: | |
|
|
471 | return conf | |
|
|
603 | 472 | |
|
|
604 | 473 | def addOperation(self, name, optype='self'): |
|
|
605 | 474 | ''' |
|
|
606 | Actualizacion - > proceso comunicacion | |
|
|
607 | En el caso de optype='self', elminar. DEfinir comuncacion IPC -> Topic | |
|
|
608 | definir el tipoc de socket o comunicacion ipc++ | |
|
|
609 | ||
|
|
610 | 475 | ''' |
|
|
611 | 476 | |
|
|
612 |
id = self. |
|
|
|
613 | priority = self.__getPriority() # Sin mucho sentido, pero puede usarse | |
|
|
614 | opConfObj = OperationConf() | |
|
|
615 | opConfObj.setup(id, name=name, priority=priority, type=optype, project_id=self.project_id, err_queue=self.err_queue, lock=self.lock) | |
|
|
616 | self.opConfObjList.append(opConfObj) | |
|
|
617 | ||
|
|
618 | return opConfObj | |
|
|
619 | ||
|
|
620 | def makeXml(self, projectElement): | |
|
|
621 | ||
|
|
622 | procUnitElement = SubElement(projectElement, self.ELEMENTNAME) | |
|
|
623 | procUnitElement.set('id', str(self.id)) | |
|
|
624 | procUnitElement.set('name', self.name) | |
|
|
625 | procUnitElement.set('datatype', self.datatype) | |
|
|
626 | procUnitElement.set('inputId', str(self.inputId)) | |
|
|
477 | id = self.getNewId() | |
|
|
478 | conf = OperationConf() | |
|
|
479 | conf.setup(id, name=name, priority='0', project_id=self.project_id, err_queue=self.err_queue) | |
|
|
480 | self.operations.append(conf) | |
|
|
627 | 481 | |
|
|
628 | for opConfObj in self.opConfObjList: | |
|
|
629 | opConfObj.makeXml(procUnitElement) | |
|
|
482 | return conf | |
|
|
630 | 483 | |
|
|
631 |
def readXml(self, |
|
|
|
484 | def readXml(self, element, project_id, err_queue): | |
|
|
632 | 485 | |
|
|
633 |
self.id = |
|
|
|
634 |
self.name = |
|
|
|
635 | self.datatype = upElement.get('datatype') | |
|
|
636 | self.inputId = upElement.get('inputId') | |
|
|
486 | self.id = element.get('id') | |
|
|
487 | self.name = element.get('name') | |
|
|
488 | self.inputId = None if element.get('inputId') == 'None' else element.get('inputId') | |
|
|
489 | self.datatype = element.get('datatype', self.name.replace(self.ELEMENTNAME.replace('Unit', ''), '')) | |
|
|
637 | 490 | self.project_id = str(project_id) |
|
|
491 | self.err_queue = err_queue | |
|
|
492 | self.operations = [] | |
|
|
493 | self.parameters = {} | |
|
|
638 | 494 | |
|
|
639 | if self.ELEMENTNAME == 'ReadUnit': | |
|
|
640 | self.datatype = self.datatype.replace('Reader', '') | |
|
|
641 | ||
|
|
642 | if self.ELEMENTNAME == 'ProcUnit': | |
|
|
643 | self.datatype = self.datatype.replace('Proc', '') | |
|
|
644 | ||
|
|
645 | if self.inputId == 'None': | |
|
|
646 | self.inputId = '0' | |
|
|
647 | ||
|
|
648 | self.opConfObjList = [] | |
|
|
649 | ||
|
|
650 | opElementList = upElement.iter(OperationConf().getElementName()) | |
|
|
651 | ||
|
|
652 | for opElement in opElementList: | |
|
|
653 | opConfObj = OperationConf() | |
|
|
654 | opConfObj.readXml(opElement, project_id) | |
|
|
655 | self.opConfObjList.append(opConfObj) | |
|
|
656 | ||
|
|
657 | def printattr(self): | |
|
|
658 | ||
|
|
659 | print('%s[%s]: name = %s, datatype = %s, inputId = %s, project_id = %s' % (self.ELEMENTNAME, | |
|
|
660 | self.id, | |
|
|
661 | self.name, | |
|
|
662 | self.datatype, | |
|
|
663 | self.inputId, | |
|
|
664 | self.project_id)) | |
|
|
665 | ||
|
|
666 | for opConfObj in self.opConfObjList: | |
|
|
667 | opConfObj.printattr() | |
|
|
668 | ||
|
|
669 | def getKwargs(self): | |
|
|
670 | ||
|
|
671 | opObj = self.opConfObjList[0] | |
|
|
672 | kwargs = opObj.getKwargs() | |
|
|
673 | ||
|
|
674 | return kwargs | |
|
|
495 | for elm in element: | |
|
|
496 | if elm.tag == 'Parameter': | |
|
|
497 | self.addParameter(elm.get('name'), elm.get('value')) | |
|
|
498 | elif elm.tag == 'Operation': | |
|
|
499 | conf = OperationConf() | |
|
|
500 | conf.readXml(elm, project_id, err_queue) | |
|
|
501 | self.operations.append(conf) | |
|
|
675 | 502 | |
|
|
676 | 503 | def createObjects(self): |
|
|
677 | 504 | ''' |
|
|
678 | 505 | Instancia de unidades de procesamiento. |
|
|
679 | 506 | ''' |
|
|
680 | 507 | |
|
|
681 | 508 | className = eval(self.name) |
|
|
682 | 509 | #print(self.name) |
|
|
683 | 510 | kwargs = self.getKwargs() |
|
|
684 | #print(kwargs) | |
|
|
685 | #print("mark_a") | |
|
|
686 | procUnitObj = className(self.id, self.inputId, self.project_id, self.err_queue, self.lock, 'ProcUnit', **kwargs) | |
|
|
687 | #print("mark_b") | |
|
|
511 | procUnitObj = className() | |
|
|
512 | procUnitObj.name = self.name | |
|
|
688 | 513 | log.success('creating process...', self.name) |
|
|
689 | 514 | |
|
|
690 |
for |
|
|
|
515 | for conf in self.operations: | |
|
|
691 | 516 | |
|
|
692 | if opConfObj.type == 'self' and opConfObj.name == 'run': | |
|
|
693 | continue | |
|
|
694 | elif opConfObj.type == 'self': | |
|
|
695 | opObj = getattr(procUnitObj, opConfObj.name) | |
|
|
696 | else: | |
|
|
697 | opObj = opConfObj.createObject() | |
|
|
517 | opObj = conf.createObject() | |
|
|
698 | 518 | |
|
|
699 | 519 | log.success('adding operation: {}, type:{}'.format( |
|
|
700 |
|
|
|
|
701 |
|
|
|
|
702 | ||
|
|
703 | procUnitObj.addOperation(opConfObj, opObj) | |
|
|
520 | conf.name, | |
|
|
521 | conf.type), self.name) | |
|
|
704 | 522 | |
|
|
705 |
procUnitObj. |
|
|
|
706 | self.procUnitObj = procUnitObj | |
|
|
523 | procUnitObj.addOperation(conf, opObj) | |
|
|
707 | 524 | |
|
|
708 | def close(self): | |
|
|
709 | ||
|
|
710 | for opConfObj in self.opConfObjList: | |
|
|
711 | if opConfObj.type == 'self': | |
|
|
712 | continue | |
|
|
525 | self.object = procUnitObj | |
|
|
713 | 526 | |
|
|
714 | opObj = self.procUnitObj.getOperationObj(opConfObj.id) | |
|
|
715 | opObj.close() | |
|
|
716 | ||
|
|
717 | self.procUnitObj.close() | |
|
|
527 | def run(self): | |
|
|
528 | ''' | |
|
|
529 | ''' | |
|
|
718 | 530 | |
|
|
719 | return | |
|
|
531 | return self.object.call(**self.getKwargs()) | |
|
|
720 | 532 | |
|
|
721 | 533 | |
|
|
722 | 534 | class ReadUnitConf(ProcUnitConf): |
|
|
723 | 535 | |
|
|
724 | 536 | ELEMENTNAME = 'ReadUnit' |
|
|
725 | 537 | |
|
|
726 | 538 | def __init__(self): |
|
|
727 | 539 | |
|
|
728 | 540 | self.id = None |
|
|
729 | 541 | self.datatype = None |
|
|
730 | 542 | self.name = None |
|
|
731 | 543 | self.inputId = None |
|
|
732 |
self.op |
|
|
|
733 | self.lock = Event() | |
|
|
734 | self.lock.set() | |
|
|
735 | self.lock.n = Value('d', 0) | |
|
|
736 | ||
|
|
737 | def getElementName(self): | |
|
|
738 | ||
|
|
739 | return self.ELEMENTNAME | |
|
|
544 | self.operations = [] | |
|
|
545 | self.parameters = {} | |
|
|
740 | 546 | |
|
|
741 | 547 | def setup(self, project_id, id, name, datatype, err_queue, path='', startDate='', endDate='', |
|
|
742 | 548 | startTime='', endTime='', server=None, **kwargs): |
|
|
743 | 549 | |
|
|
744 | ||
|
|
745 | ''' | |
|
|
746 | *****el id del proceso sera el Topico | |
|
|
747 | ||
|
|
748 | Adicion de {topic}, si no esta presente -> error | |
|
|
749 | kwargs deben ser trasmitidos en la instanciacion | |
|
|
750 | ||
|
|
751 | ''' | |
|
|
752 | ||
|
|
753 | # Compatible with old signal chain version | |
|
|
754 | 550 | if datatype == None and name == None: |
|
|
755 | 551 | raise ValueError('datatype or name should be defined') |
|
|
756 | 552 | if name == None: |
|
|
757 | 553 | if 'Reader' in datatype: |
|
|
758 | 554 | name = datatype |
|
|
759 | 555 | datatype = name.replace('Reader','') |
|
|
760 | 556 | else: |
|
|
761 | 557 | name = '{}Reader'.format(datatype) |
|
|
762 | 558 | if datatype == None: |
|
|
763 | 559 | if 'Reader' in name: |
|
|
764 | 560 | datatype = name.replace('Reader','') |
|
|
765 | 561 | else: |
|
|
766 | 562 | datatype = name |
|
|
767 | 563 | name = '{}Reader'.format(name) |
|
|
768 | 564 | |
|
|
769 | 565 | self.id = id |
|
|
770 | 566 | self.project_id = project_id |
|
|
771 | 567 | self.name = name |
|
|
772 | 568 | self.datatype = datatype |
|
|
773 | if path != '': | |
|
|
774 | self.path = os.path.abspath(path) | |
|
|
775 | print (self.path) | |
|
|
776 | self.startDate = startDate | |
|
|
777 | self.endDate = endDate | |
|
|
778 | self.startTime = startTime | |
|
|
779 | self.endTime = endTime | |
|
|
780 | self.server = server | |
|
|
781 | 569 | self.err_queue = err_queue |
|
|
782 | self.addRunOperation(**kwargs) | |
|
|
783 | 570 | |
|
|
784 | def update(self, **kwargs): | |
|
|
785 | ||
|
|
786 | if 'datatype' in kwargs: | |
|
|
787 | datatype = kwargs.pop('datatype') | |
|
|
788 | if 'Reader' in datatype: | |
|
|
789 | self.name = datatype | |
|
|
790 | else: | |
|
|
791 | self.name = '%sReader' % (datatype) | |
|
|
792 | self.datatype = self.name.replace('Reader', '') | |
|
|
793 | ||
|
|
794 | attrs = ('path', 'startDate', 'endDate', | |
|
|
795 | 'startTime', 'endTime') | |
|
|
796 | ||
|
|
797 | for attr in attrs: | |
|
|
798 | if attr in kwargs: | |
|
|
799 | setattr(self, attr, kwargs.pop(attr)) | |
|
|
800 | ||
|
|
801 | self.updateRunOperation(**kwargs) | |
|
|
802 | ||
|
|
803 | def removeOperations(self): | |
|
|
571 | self.addParameter(name='path', value=path) | |
|
|
572 | self.addParameter(name='startDate', value=startDate) | |
|
|
573 | self.addParameter(name='endDate', value=endDate) | |
|
|
574 | self.addParameter(name='startTime', value=startTime) | |
|
|
575 | self.addParameter(name='endTime', value=endTime) | |
|
|
804 | 576 | |
|
|
805 | for obj in self.opConfObjList: | |
|
|
806 | del obj | |
|
|
807 | ||
|
|
808 | self.opConfObjList = [] | |
|
|
809 | ||
|
|
810 | def addRunOperation(self, **kwargs): | |
|
|
811 | ||
|
|
812 | opObj = self.addOperation(name='run', optype='self') | |
|
|
813 | ||
|
|
814 | if self.server is None: | |
|
|
815 | opObj.addParameter( | |
|
|
816 | name='datatype', value=self.datatype, format='str') | |
|
|
817 | opObj.addParameter(name='path', value=self.path, format='str') | |
|
|
818 | opObj.addParameter( | |
|
|
819 | name='startDate', value=self.startDate, format='date') | |
|
|
820 | opObj.addParameter( | |
|
|
821 | name='endDate', value=self.endDate, format='date') | |
|
|
822 | opObj.addParameter( | |
|
|
823 | name='startTime', value=self.startTime, format='time') | |
|
|
824 | opObj.addParameter( | |
|
|
825 | name='endTime', value=self.endTime, format='time') | |
|
|
826 | ||
|
|
827 | for key, value in list(kwargs.items()): | |
|
|
828 | opObj.addParameter(name=key, value=value, | |
|
|
829 | format=type(value).__name__) | |
|
|
830 | else: | |
|
|
831 | opObj.addParameter(name='server', value=self.server, format='str') | |
|
|
832 | ||
|
|
833 | return opObj | |
|
|
834 | ||
|
|
835 | def updateRunOperation(self, **kwargs): | |
|
|
836 | ||
|
|
837 | opObj = self.getOperationObj(name='run') | |
|
|
838 | opObj.removeParameters() | |
|
|
839 | ||
|
|
840 | opObj.addParameter(name='datatype', value=self.datatype, format='str') | |
|
|
841 | opObj.addParameter(name='path', value=self.path, format='str') | |
|
|
842 | opObj.addParameter( | |
|
|
843 | name='startDate', value=self.startDate, format='date') | |
|
|
844 | opObj.addParameter(name='endDate', value=self.endDate, format='date') | |
|
|
845 | opObj.addParameter( | |
|
|
846 | name='startTime', value=self.startTime, format='time') | |
|
|
847 | opObj.addParameter(name='endTime', value=self.endTime, format='time') | |
|
|
848 | ||
|
|
849 | for key, value in list(kwargs.items()): | |
|
|
850 | opObj.addParameter(name=key, value=value, | |
|
|
851 | format=type(value).__name__) | |
|
|
852 | ||
|
|
853 | return opObj | |
|
|
854 | ||
|
|
855 | def readXml(self, upElement, project_id): | |
|
|
856 | ||
|
|
857 | self.id = upElement.get('id') | |
|
|
858 | self.name = upElement.get('name') | |
|
|
859 | self.datatype = upElement.get('datatype') | |
|
|
860 | self.project_id = str(project_id) #yong | |
|
|
861 | ||
|
|
862 | if self.ELEMENTNAME == 'ReadUnit': | |
|
|
863 | self.datatype = self.datatype.replace('Reader', '') | |
|
|
864 | ||
|
|
865 | self.opConfObjList = [] | |
|
|
866 | ||
|
|
867 | opElementList = upElement.iter(OperationConf().getElementName()) | |
|
|
868 | ||
|
|
869 | for opElement in opElementList: | |
|
|
870 | opConfObj = OperationConf() | |
|
|
871 | opConfObj.readXml(opElement, project_id) | |
|
|
872 | self.opConfObjList.append(opConfObj) | |
|
|
873 | ||
|
|
874 | if opConfObj.name == 'run': | |
|
|
875 | self.path = opConfObj.getParameterValue('path') | |
|
|
876 | self.startDate = opConfObj.getParameterValue('startDate') | |
|
|
877 | self.endDate = opConfObj.getParameterValue('endDate') | |
|
|
878 | self.startTime = opConfObj.getParameterValue('startTime') | |
|
|
879 | self.endTime = opConfObj.getParameterValue('endTime') | |
|
|
577 | for key, value in kwargs.items(): | |
|
|
578 | self.addParameter(name=key, value=value) | |
|
|
880 | 579 | |
|
|
881 | 580 | |
|
|
882 | 581 | class Project(Process): |
|
|
582 | """API to create signal chain projects""" | |
|
|
883 | 583 | |
|
|
884 | 584 | ELEMENTNAME = 'Project' |
|
|
885 | 585 | |
|
|
886 | def __init__(self): | |
|
|
586 | def __init__(self, name=''): | |
|
|
887 | 587 | |
|
|
888 | 588 | Process.__init__(self) |
|
|
889 |
self.id = |
|
|
|
589 | self.id = '1' | |
|
|
590 | if name: | |
|
|
591 | self.name = '{} ({})'.format(Process.__name__, name) | |
|
|
890 | 592 | self.filename = None |
|
|
891 | 593 | self.description = None |
|
|
892 | 594 | self.email = None |
|
|
893 |
self.alarm = |
|
|
|
894 |
self. |
|
|
|
895 | self.err_queue = Queue() | |
|
|
595 | self.alarm = [] | |
|
|
596 | self.configurations = {} | |
|
|
597 | # self.err_queue = Queue() | |
|
|
598 | self.err_queue = None | |
|
|
599 | self.started = False | |
|
|
896 | 600 | |
|
|
897 |
def |
|
|
|
601 | def getNewId(self): | |
|
|
898 | 602 | |
|
|
899 |
idList = list(self. |
|
|
|
603 | idList = list(self.configurations.keys()) | |
|
|
900 | 604 | id = int(self.id) * 10 |
|
|
901 | 605 | |
|
|
902 | 606 | while True: |
|
|
903 | 607 | id += 1 |
|
|
904 | 608 | |
|
|
905 | 609 | if str(id) in idList: |
|
|
906 | 610 | continue |
|
|
907 | 611 | |
|
|
908 | 612 | break |
|
|
909 | 613 | |
|
|
910 | 614 | return str(id) |
|
|
911 | 615 | |
|
|
912 | def getElementName(self): | |
|
|
913 | ||
|
|
914 | return self.ELEMENTNAME | |
|
|
915 | ||
|
|
916 | def getId(self): | |
|
|
917 | ||
|
|
918 | return self.id | |
|
|
919 | ||
|
|
920 | 616 | def updateId(self, new_id): |
|
|
921 | 617 | |
|
|
922 | 618 | self.id = str(new_id) |
|
|
923 | 619 | |
|
|
924 |
keyList = list(self. |
|
|
|
620 | keyList = list(self.configurations.keys()) | |
|
|
925 | 621 | keyList.sort() |
|
|
926 | 622 | |
|
|
927 | 623 | n = 1 |
|
|
928 |
new |
|
|
|
624 | new_confs = {} | |
|
|
929 | 625 | |
|
|
930 | 626 | for procKey in keyList: |
|
|
931 | 627 | |
|
|
932 |
|
|
|
|
628 | conf = self.configurations[procKey] | |
|
|
933 | 629 | idProcUnit = str(int(self.id) * 10 + n) |
|
|
934 |
|
|
|
|
935 |
new |
|
|
|
630 | conf.updateId(idProcUnit) | |
|
|
631 | new_confs[idProcUnit] = conf | |
|
|
936 | 632 | n += 1 |
|
|
937 | 633 | |
|
|
938 |
self. |
|
|
|
634 | self.configurations = new_confs | |
|
|
939 | 635 | |
|
|
940 | 636 | def setup(self, id=1, name='', description='', email=None, alarm=[]): |
|
|
941 | 637 | |
|
|
942 | print(' ') | |
|
|
943 | print('*' * 60) | |
|
|
944 | print('* Starting SIGNAL CHAIN PROCESSING (Multiprocessing) v%s *' % schainpy.__version__) | |
|
|
945 | print('*' * 60) | |
|
|
946 | print("* Python " + python_version() + " *") | |
|
|
947 | print('*' * 19) | |
|
|
948 | print(' ') | |
|
|
949 | 638 | self.id = str(id) |
|
|
950 | 639 | self.description = description |
|
|
951 | 640 | self.email = email |
|
|
952 | 641 | self.alarm = alarm |
|
|
953 | 642 | if name: |
|
|
954 | 643 | self.name = '{} ({})'.format(Process.__name__, name) |
|
|
955 | 644 | |
|
|
956 | 645 | def update(self, **kwargs): |
|
|
957 | 646 | |
|
|
958 |
for key, value in |
|
|
|
647 | for key, value in kwargs.items(): | |
|
|
959 | 648 | setattr(self, key, value) |
|
|
960 | 649 | |
|
|
961 | 650 | def clone(self): |
|
|
962 | 651 | |
|
|
963 | 652 | p = Project() |
|
|
964 | p.procUnitConfObjDict = self.procUnitConfObjDict | |
|
|
653 | p.id = self.id | |
|
|
654 | p.name = self.name | |
|
|
655 | p.description = self.description | |
|
|
656 | p.configurations = self.configurations.copy() | |
|
|
657 | ||
|
|
965 | 658 | return p |
|
|
966 | 659 | |
|
|
967 | 660 | def addReadUnit(self, id=None, datatype=None, name=None, **kwargs): |
|
|
968 | 661 | |
|
|
969 | 662 | ''' |
|
|
970 | Actualizacion: | |
|
|
971 | Se agrego un nuevo argumento: topic -relativo a la forma de comunicar los procesos simultaneos | |
|
|
972 | ||
|
|
973 | * El id del proceso sera el topico al que se deben subscribir los procUnits para recibir la informacion(data) | |
|
|
974 | ||
|
|
975 | 663 | ''' |
|
|
976 | 664 | |
|
|
977 | 665 | if id is None: |
|
|
978 |
idReadUnit = self. |
|
|
|
666 | idReadUnit = self.getNewId() | |
|
|
979 | 667 | else: |
|
|
980 | 668 | idReadUnit = str(id) |
|
|
981 | 669 | |
|
|
982 |
|
|
|
|
983 |
|
|
|
|
984 | self.procUnitConfObjDict[readUnitConfObj.getId()] = readUnitConfObj | |
|
|
670 | conf = ReadUnitConf() | |
|
|
671 | conf.setup(self.id, idReadUnit, name, datatype, self.err_queue, **kwargs) | |
|
|
672 | self.configurations[conf.id] = conf | |
|
|
985 | 673 | |
|
|
986 |
return |
|
|
|
674 | return conf | |
|
|
987 | 675 | |
|
|
988 | def addProcUnit(self, inputId='0', datatype=None, name=None): | |
|
|
676 | def addProcUnit(self, id=None, inputId='0', datatype=None, name=None): | |
|
|
989 | 677 | |
|
|
990 | 678 | ''' |
|
|
991 | Actualizacion: | |
|
|
992 | Se agrego dos nuevos argumentos: topic_read (lee data de otro procUnit) y topic_write(escribe o envia data a otro procUnit) | |
|
|
993 | Deberia reemplazar a "inputId" | |
|
|
994 | ||
|
|
995 | ** A fin de mantener el inputID, este sera la representaacion del topicoal que deben subscribirse. El ID propio de la intancia | |
|
|
996 | (proceso) sera el topico de la publicacion, todo sera asignado de manera dinamica. | |
|
|
997 | ||
|
|
998 | 679 | ''' |
|
|
999 | 680 | |
|
|
1000 | idProcUnit = self.__getNewId() | |
|
|
1001 | procUnitConfObj = ProcUnitConf() | |
|
|
1002 | input_proc = self.procUnitConfObjDict[inputId] | |
|
|
1003 | procUnitConfObj.setup(self.id, idProcUnit, name, datatype, inputId, self.err_queue, input_proc.lock) | |
|
|
1004 | self.procUnitConfObjDict[procUnitConfObj.getId()] = procUnitConfObj | |
|
|
1005 | ||
|
|
1006 | return procUnitConfObj | |
|
|
1007 | ||
|
|
1008 | def removeProcUnit(self, id): | |
|
|
681 | if id is None: | |
|
|
682 | idProcUnit = self.getNewId() | |
|
|
683 | else: | |
|
|
684 | idProcUnit = id | |
|
|
1009 | 685 | |
|
|
1010 | if id in list(self.procUnitConfObjDict.keys()): | |
|
|
1011 | self.procUnitConfObjDict.pop(id) | |
|
|
686 | conf = ProcUnitConf() | |
|
|
687 | conf.setup(self.id, idProcUnit, name, datatype, inputId, self.err_queue) | |
|
|
688 | self.configurations[conf.id] = conf | |
|
|
1012 | 689 | |
|
|
1013 | def getReadUnitId(self): | |
|
|
690 | return conf | |
|
|
1014 | 691 | |
|
|
1015 | readUnitConfObj = self.getReadUnitObj() | |
|
|
692 | def removeProcUnit(self, id): | |
|
|
1016 | 693 | |
|
|
1017 | return readUnitConfObj.id | |
|
|
694 | if id in self.configurations: | |
|
|
695 | self.configurations.pop(id) | |
|
|
1018 | 696 | |
|
|
1019 |
def getReadUnit |
|
|
|
697 | def getReadUnit(self): | |
|
|
1020 | 698 | |
|
|
1021 |
for obj in list(self. |
|
|
|
1022 |
if obj. |
|
|
|
699 | for obj in list(self.configurations.values()): | |
|
|
700 | if obj.ELEMENTNAME == 'ReadUnit': | |
|
|
1023 | 701 | return obj |
|
|
1024 | 702 | |
|
|
1025 | 703 | return None |
|
|
1026 | 704 | |
|
|
1027 |
def getProcUnit |
|
|
|
1028 | ||
|
|
1029 | if id != None: | |
|
|
1030 | return self.procUnitConfObjDict[id] | |
|
|
705 | def getProcUnit(self, id): | |
|
|
1031 | 706 | |
|
|
1032 | if name != None: | |
|
|
1033 | return self.getProcUnitObjByName(name) | |
|
|
1034 | ||
|
|
1035 | return None | |
|
|
707 | return self.configurations[id] | |
|
|
1036 | 708 | |
|
|
1037 |
def get |
|
|
|
709 | def getUnits(self): | |
|
|
1038 | 710 | |
|
|
1039 | for obj in list(self.procUnitConfObjDict.values()): | |
|
|
1040 | if obj.name == name: | |
|
|
1041 | return obj | |
|
|
711 | keys = list(self.configurations) | |
|
|
712 | keys.sort() | |
|
|
1042 | 713 | |
|
|
1043 |
r |
|
|
|
714 | for key in keys: | |
|
|
715 | yield self.configurations[key] | |
|
|
1044 | 716 | |
|
|
1045 | def procUnitItems(self): | |
|
|
717 | def updateUnit(self, id, **kwargs): | |
|
|
1046 | 718 | |
|
|
1047 | return list(self.procUnitConfObjDict.items()) | |
|
|
719 | conf = self.configurations[id].update(**kwargs) | |
|
|
1048 | 720 | |
|
|
1049 | 721 | def makeXml(self): |
|
|
1050 | 722 | |
|
|
1051 |
|
|
|
|
1052 |
|
|
|
|
1053 |
|
|
|
|
1054 |
|
|
|
|
723 | xml = Element('Project') | |
|
|
724 | xml.set('id', str(self.id)) | |
|
|
725 | xml.set('name', self.name) | |
|
|
726 | xml.set('description', self.description) | |
|
|
1055 | 727 | |
|
|
1056 |
for |
|
|
|
1057 |
|
|
|
|
728 | for conf in self.configurations.values(): | |
|
|
729 | conf.makeXml(xml) | |
|
|
1058 | 730 | |
|
|
1059 | self.projectElement = projectElement | |
|
|
731 | self.xml = xml | |
|
|
1060 | 732 | |
|
|
1061 | 733 | def writeXml(self, filename=None): |
|
|
1062 | 734 | |
|
|
1063 | 735 | if filename == None: |
|
|
1064 | 736 | if self.filename: |
|
|
1065 | 737 | filename = self.filename |
|
|
1066 | 738 | else: |
|
|
1067 | 739 | filename = 'schain.xml' |
|
|
1068 | 740 | |
|
|
1069 | 741 | if not filename: |
|
|
1070 | 742 | print('filename has not been defined. Use setFilename(filename) for do it.') |
|
|
1071 | 743 | return 0 |
|
|
1072 | 744 | |
|
|
1073 | 745 | abs_file = os.path.abspath(filename) |
|
|
1074 | 746 | |
|
|
1075 | 747 | if not os.access(os.path.dirname(abs_file), os.W_OK): |
|
|
1076 | 748 | print('No write permission on %s' % os.path.dirname(abs_file)) |
|
|
1077 | 749 | return 0 |
|
|
1078 | 750 | |
|
|
1079 | 751 | if os.path.isfile(abs_file) and not(os.access(abs_file, os.W_OK)): |
|
|
1080 | 752 | print('File %s already exists and it could not be overwriten' % abs_file) |
|
|
1081 | 753 | return 0 |
|
|
1082 | 754 | |
|
|
1083 | 755 | self.makeXml() |
|
|
1084 | 756 | |
|
|
1085 |
ElementTree(self. |
|
|
|
757 | ElementTree(self.xml).write(abs_file, method='xml') | |
|
|
1086 | 758 | |
|
|
1087 | 759 | self.filename = abs_file |
|
|
1088 | 760 | |
|
|
1089 | 761 | return 1 |
|
|
1090 | 762 | |
|
|
1091 |
def readXml(self, filename |
|
|
|
1092 | ||
|
|
1093 | if not filename: | |
|
|
1094 | print('filename is not defined') | |
|
|
1095 | return 0 | |
|
|
763 | def readXml(self, filename): | |
|
|
1096 | 764 | |
|
|
1097 | 765 | abs_file = os.path.abspath(filename) |
|
|
1098 | 766 | |
|
|
1099 | if not os.path.isfile(abs_file): | |
|
|
1100 | print('%s file does not exist' % abs_file) | |
|
|
1101 | return 0 | |
|
|
1102 | ||
|
|
1103 | self.projectElement = None | |
|
|
1104 | self.procUnitConfObjDict = {} | |
|
|
767 | self.configurations = {} | |
|
|
1105 | 768 | |
|
|
1106 | 769 | try: |
|
|
1107 |
self. |
|
|
|
770 | self.xml = ElementTree().parse(abs_file) | |
|
|
1108 | 771 | except: |
|
|
1109 |
|
|
|
|
772 | log.error('Error reading %s, verify file format' % filename) | |
|
|
1110 | 773 | return 0 |
|
|
1111 | 774 | |
|
|
1112 | self.project = self.projectElement.tag | |
|
|
1113 | ||
|
|
1114 |
self. |
|
|
|
1115 | self.name = self.projectElement.get('name') | |
|
|
1116 | self.description = self.projectElement.get('description') | |
|
|
1117 | ||
|
|
1118 | readUnitElementList = self.projectElement.iter( | |
|
|
1119 | ReadUnitConf().getElementName()) | |
|
|
1120 | ||
|
|
1121 | for readUnitElement in readUnitElementList: | |
|
|
1122 |
|
|
|
|
1123 | readUnitConfObj.readXml(readUnitElement, self.id) | |
|
|
1124 | self.procUnitConfObjDict[readUnitConfObj.getId()] = readUnitConfObj | |
|
|
1125 | ||
|
|
1126 | procUnitElementList = self.projectElement.iter( | |
|
|
1127 | ProcUnitConf().getElementName()) | |
|
|
1128 | ||
|
|
1129 | for procUnitElement in procUnitElementList: | |
|
|
1130 | procUnitConfObj = ProcUnitConf() | |
|
|
1131 | procUnitConfObj.readXml(procUnitElement, self.id) | |
|
|
1132 | self.procUnitConfObjDict[procUnitConfObj.getId()] = procUnitConfObj | |
|
|
775 | self.id = self.xml.get('id') | |
|
|
776 | self.name = self.xml.get('name') | |
|
|
777 | self.description = self.xml.get('description') | |
|
|
778 | ||
|
|
779 | for element in self.xml: | |
|
|
780 | if element.tag == 'ReadUnit': | |
|
|
781 | conf = ReadUnitConf() | |
|
|
782 | conf.readXml(element, self.id, self.err_queue) | |
|
|
783 | self.configurations[conf.id] = conf | |
|
|
784 | elif element.tag == 'ProcUnit': | |
|
|
785 | conf = ProcUnitConf() | |
|
|
786 | input_proc = self.configurations[element.get('inputId')] | |
|
|
787 | conf.readXml(element, self.id, self.err_queue) | |
|
|
788 | self.configurations[conf.id] = conf | |
|
|
1133 | 789 | |
|
|
1134 | 790 | self.filename = abs_file |
|
|
1135 | 791 | |
|
|
1136 | 792 | return 1 |
|
|
1137 | 793 | |
|
|
1138 | 794 | def __str__(self): |
|
|
1139 | 795 | |
|
|
1140 |
|
|
|
|
1141 | self.name, | |
|
|
1142 | self.description, | |
|
|
1143 | self.id)) | |
|
|
796 | text = '\nProject[id=%s, name=%s, description=%s]\n\n' % ( | |
|
|
797 | self.id, | |
|
|
798 | self.name, | |
|
|
799 | self.description, | |
|
|
800 | ) | |
|
|
801 | ||
|
|
802 | for conf in self.configurations.values(): | |
|
|
803 | text += '{}'.format(conf) | |
|
|
1144 | 804 | |
|
|
1145 | for procUnitConfObj in self.procUnitConfObjDict.values(): | |
|
|
1146 | print(procUnitConfObj) | |
|
|
805 | return text | |
|
|
1147 | 806 | |
|
|
1148 | 807 | def createObjects(self): |
|
|
1149 | 808 | |
|
|
1150 | ||
|
|
1151 | keys = list(self.procUnitConfObjDict.keys()) | |
|
|
809 | keys = list(self.configurations.keys()) | |
|
|
1152 | 810 | keys.sort() |
|
|
1153 | 811 | for key in keys: |
|
|
1154 | self.procUnitConfObjDict[key].createObjects() | |
|
|
812 | conf = self.configurations[key] | |
|
|
813 | conf.createObjects() | |
|
|
814 | if conf.inputId is not None: | |
|
|
815 | conf.object.setInput(self.configurations[conf.inputId].object) | |
|
|
1155 | 816 | |
|
|
1156 | 817 | def monitor(self): |
|
|
1157 | 818 | |
|
|
1158 |
t = Thread(target=self. |
|
|
|
819 | t = Thread(target=self._monitor, args=(self.err_queue, self.ctx)) | |
|
|
1159 | 820 | t.start() |
|
|
1160 | 821 | |
|
|
1161 |
def |
|
|
|
822 | def _monitor(self, queue, ctx): | |
|
|
1162 | 823 | |
|
|
1163 | 824 | import socket |
|
|
1164 | 825 | |
|
|
1165 | 826 | procs = 0 |
|
|
1166 | 827 | err_msg = '' |
|
|
1167 | 828 | |
|
|
1168 | 829 | while True: |
|
|
1169 | 830 | msg = queue.get() |
|
|
1170 | 831 | if '#_start_#' in msg: |
|
|
1171 | 832 | procs += 1 |
|
|
1172 | 833 | elif '#_end_#' in msg: |
|
|
1173 | 834 | procs -=1 |
|
|
1174 | 835 | else: |
|
|
1175 | 836 | err_msg = msg |
|
|
1176 | 837 | |
|
|
1177 | 838 | if procs == 0 or 'Traceback' in err_msg: |
|
|
1178 | 839 | break |
|
|
1179 | 840 | time.sleep(0.1) |
|
|
1180 | 841 | |
|
|
1181 | 842 | if '|' in err_msg: |
|
|
1182 | 843 | name, err = err_msg.split('|') |
|
|
1183 | 844 | if 'SchainWarning' in err: |
|
|
1184 | 845 | log.warning(err.split('SchainWarning:')[-1].split('\n')[0].strip(), name) |
|
|
1185 | 846 | elif 'SchainError' in err: |
|
|
1186 | 847 | log.error(err.split('SchainError:')[-1].split('\n')[0].strip(), name) |
|
|
1187 | 848 | else: |
|
|
1188 | 849 | log.error(err, name) |
|
|
1189 | 850 | else: |
|
|
1190 | 851 | name, err = self.name, err_msg |
|
|
1191 | 852 | |
|
|
1192 |
time.sleep( |
|
|
|
1193 | ||
|
|
1194 | for conf in self.procUnitConfObjDict.values(): | |
|
|
1195 | for confop in conf.opConfObjList: | |
|
|
1196 | if confop.type == 'external': | |
|
|
1197 | confop.opObj.terminate() | |
|
|
1198 | conf.procUnitObj.terminate() | |
|
|
853 | time.sleep(1) | |
|
|
1199 | 854 | |
|
|
1200 | 855 | ctx.term() |
|
|
1201 | 856 | |
|
|
1202 | 857 | message = ''.join(err) |
|
|
1203 | 858 | |
|
|
1204 | 859 | if err_msg: |
|
|
1205 | 860 | subject = 'SChain v%s: Error running %s\n' % ( |
|
|
1206 | 861 | schainpy.__version__, self.name) |
|
|
1207 | 862 | |
|
|
1208 | 863 | subtitle = 'Hostname: %s\n' % socket.gethostbyname( |
|
|
1209 | 864 | socket.gethostname()) |
|
|
1210 | 865 | subtitle += 'Working directory: %s\n' % os.path.abspath('./') |
|
|
1211 | 866 | subtitle += 'Configuration file: %s\n' % self.filename |
|
|
1212 | 867 | subtitle += 'Time: %s\n' % str(datetime.datetime.now()) |
|
|
1213 | 868 | |
|
|
1214 |
readUnitConfObj = self.getReadUnit |
|
|
|
869 | readUnitConfObj = self.getReadUnit() | |
|
|
1215 | 870 | if readUnitConfObj: |
|
|
1216 | 871 | subtitle += '\nInput parameters:\n' |
|
|
1217 | subtitle += '[Data path = %s]\n' % readUnitConfObj.path | |
|
|
1218 |
subtitle += '[ |
|
|
|
1219 |
subtitle += '[ |
|
|
|
1220 |
subtitle += '[ |
|
|
|
1221 |
subtitle += '[ |
|
|
|
1222 | subtitle += '[End time = %s]\n' % readUnitConfObj.endTime | |
|
|
872 | subtitle += '[Data path = %s]\n' % readUnitConfObj.parameters['path'] | |
|
|
873 | subtitle += '[Start date = %s]\n' % readUnitConfObj.parameters['startDate'] | |
|
|
874 | subtitle += '[End date = %s]\n' % readUnitConfObj.parameters['endDate'] | |
|
|
875 | subtitle += '[Start time = %s]\n' % readUnitConfObj.parameters['startTime'] | |
|
|
876 | subtitle += '[End time = %s]\n' % readUnitConfObj.parameters['endTime'] | |
|
|
1223 | 877 | |
|
|
1224 | 878 | a = Alarm( |
|
|
1225 | 879 | modes=self.alarm, |
|
|
1226 | 880 | email=self.email, |
|
|
1227 | 881 | message=message, |
|
|
1228 | 882 | subject=subject, |
|
|
1229 | 883 | subtitle=subtitle, |
|
|
1230 | 884 | filename=self.filename |
|
|
1231 | 885 | ) |
|
|
1232 | 886 | |
|
|
1233 | 887 | a.start() |
|
|
1234 | 888 | |
|
|
1235 | def isPaused(self): | |
|
|
1236 | return 0 | |
|
|
1237 | ||
|
|
1238 | def isStopped(self): | |
|
|
1239 | return 0 | |
|
|
1240 | ||
|
|
1241 | def runController(self): | |
|
|
1242 | ''' | |
|
|
1243 | returns 0 when this process has been stopped, 1 otherwise | |
|
|
1244 | ''' | |
|
|
1245 | ||
|
|
1246 | if self.isPaused(): | |
|
|
1247 | print('Process suspended') | |
|
|
1248 | ||
|
|
1249 | while True: | |
|
|
1250 | time.sleep(0.1) | |
|
|
1251 | ||
|
|
1252 | if not self.isPaused(): | |
|
|
1253 | break | |
|
|
1254 | ||
|
|
1255 | if self.isStopped(): | |
|
|
1256 | break | |
|
|
1257 | ||
|
|
1258 | print('Process reinitialized') | |
|
|
1259 | ||
|
|
1260 | if self.isStopped(): | |
|
|
1261 | print('Process stopped') | |
|
|
1262 | return 0 | |
|
|
1263 | ||
|
|
1264 | return 1 | |
|
|
1265 | ||
|
|
1266 | 889 | def setFilename(self, filename): |
|
|
1267 | 890 | |
|
|
1268 | 891 | self.filename = filename |
|
|
1269 | 892 | |
|
|
1270 |
def |
|
|
|
893 | def runProcs(self): | |
|
|
1271 | 894 | |
|
|
1272 | if not os.path.exists('/tmp/schain'): | |
|
|
1273 | os.mkdir('/tmp/schain') | |
|
|
895 | err = False | |
|
|
896 | n = len(self.configurations) | |
|
|
1274 | 897 | |
|
|
1275 | self.ctx = zmq.Context() | |
|
|
1276 | xpub = self.ctx.socket(zmq.XPUB) | |
|
|
1277 | xpub.bind('ipc:///tmp/schain/{}_pub'.format(self.id)) | |
|
|
1278 | xsub = self.ctx.socket(zmq.XSUB) | |
|
|
1279 | xsub.bind('ipc:///tmp/schain/{}_sub'.format(self.id)) | |
|
|
1280 | self.monitor() | |
|
|
1281 | try: | |
|
|
1282 | zmq.proxy(xpub, xsub) | |
|
|
1283 | except zmq.ContextTerminated: | |
|
|
1284 | xpub.close() | |
|
|
1285 | xsub.close() | |
|
|
898 | while not err: | |
|
|
899 | for conf in self.getUnits(): | |
|
|
900 | ok = conf.run() | |
|
|
901 | if ok == 'Error': | |
|
|
902 | n -= 1 | |
|
|
903 | continue | |
|
|
904 | elif not ok: | |
|
|
905 | break | |
|
|
906 | if n == 0: | |
|
|
907 | err = True | |
|
|
1286 | 908 | |
|
|
1287 | 909 | def run(self): |
|
|
1288 | 910 | |
|
|
1289 |
log.success('Starting {} |
|
|
|
911 | log.success('\nStarting Project {} [id={}]'.format(self.name, self.id), tag='') | |
|
|
912 | self.started = True | |
|
|
1290 | 913 | self.start_time = time.time() |
|
|
1291 | 914 | self.createObjects() |
|
|
1292 |
self. |
|
|
|
1293 | log.success('{} Done (Time: {}s)'.format( | |
|
|
915 | self.runProcs() | |
|
|
916 | log.success('{} Done (Time: {:4.2f}s)'.format( | |
|
|
1294 | 917 | self.name, |
|
|
1295 | 918 | time.time()-self.start_time), '') |
| @@ -1,1 +0,0 | |||
|
|
1 | from viewcontroller import * No newline at end of file | |
| @@ -1,39 +1,325 | |||
|
|
1 | 1 | #!/usr/bin/env python |
|
|
2 | 2 | import os |
|
|
3 | 3 | import sys |
|
|
4 | import ast | |
|
|
5 | ||
|
|
6 | from schainpy.controller import Project | |
|
|
7 | from schainpy.cli import cli | |
|
|
4 | 8 | from schainpy.utils import log |
|
|
5 | 9 | |
|
|
6 | 10 | try: |
|
|
7 | from PyQt4 import QtCore, QtGui | |
|
|
8 |
from |
|
|
|
11 | import kivy | |
|
|
12 | from kivy.app import App | |
|
|
13 | from kivy.uix.label import Label | |
|
|
14 | from kivy.uix.boxlayout import BoxLayout | |
|
|
15 | from kivy.uix.gridlayout import GridLayout | |
|
|
16 | from kivy.uix.textinput import TextInput | |
|
|
17 | from kivy.uix.button import Button | |
|
|
18 | from kivy.uix.dropdown import DropDown | |
|
|
19 | from kivy.uix.togglebutton import ToggleButton | |
|
|
20 | from kivy.uix.popup import Popup | |
|
|
21 | from kivy.uix.filechooser import FileChooserListView | |
|
|
9 | 22 | except: |
|
|
10 | 23 | log.error( |
|
|
11 |
'You should install |
|
|
|
24 | 'You should install kivy module in order to run the GUI.') | |
|
|
12 | 25 | sys.exit() |
|
|
13 | 26 | |
|
|
14 | from schainpy.gui.viewcontroller.initwindow import InitWindow | |
|
|
15 | from schainpy.gui.viewcontroller.basicwindow import BasicWindow | |
|
|
16 | from schainpy.gui.viewcontroller.workspace import Workspace | |
|
|
17 | 27 | |
|
|
28 | DEFAULTS = { | |
|
|
29 | 'path': os.path.expanduser('~'), | |
|
|
30 | 'startDate': '2018/01/01', | |
|
|
31 | 'endDate': '2020/01/01', | |
|
|
32 | 'startTime': '00:00:00', | |
|
|
33 | 'endTime': '23:59:59', | |
|
|
34 | 'online': '1', | |
|
|
35 | 'delay': '30', | |
|
|
36 | 'walk': '1', | |
|
|
37 | 'show': '1', | |
|
|
38 | 'zmin': '10', | |
|
|
39 | 'zmax': '40', | |
|
|
40 | } | |
|
|
41 | ||
|
|
42 | ||
|
|
43 | class MainLayout(BoxLayout): | |
|
|
44 | def __init__(self, **kwargs): | |
|
|
45 | super(MainLayout, self).__init__(**kwargs) | |
|
|
46 | ||
|
|
47 | self.workspace = os.path.join(os.path.expanduser('~'), 'workspace/scripts') | |
|
|
48 | self.current_unit_id = None | |
|
|
49 | self._units = [] | |
|
|
50 | self.project = Project() | |
|
|
51 | self.project.setup(id='1', name='test', description='') | |
|
|
52 | ||
|
|
53 | self.sidebar_left = BoxLayout(orientation='vertical', size_hint_x=0.4, spacing=5) | |
|
|
54 | self.body = BoxLayout(orientation='vertical', spacing=5) | |
|
|
55 | self.sidebar_right = BoxLayout(orientation='vertical', size_hint_x=0.6, spacing=5) | |
|
|
56 | ||
|
|
57 | bt_prj = Button(text='Project') | |
|
|
58 | bt_prj.bind(on_press=self.show_project) | |
|
|
59 | self.sidebar_left.add_widget(bt_prj) | |
|
|
60 | ||
|
|
61 | bt_add_unit = Button(text='Add Unit') | |
|
|
62 | bt_add_unit.bind(on_press=self.select_unit) | |
|
|
63 | self.sidebar_left.add_widget(bt_add_unit) | |
|
|
64 | ||
|
|
65 | bt_add_operation = Button(text='Add Operation') | |
|
|
66 | bt_add_operation.bind(on_press=self.select_operation) | |
|
|
67 | self.sidebar_left.add_widget(bt_add_operation) | |
|
|
68 | ||
|
|
69 | bt_import = Button(text='Import') | |
|
|
70 | bt_import.bind(on_press=self.load) | |
|
|
71 | self.sidebar_left.add_widget(bt_import) | |
|
|
72 | ||
|
|
73 | bt_export = Button(text='Export') | |
|
|
74 | bt_export.bind(on_press=self.export) | |
|
|
75 | self.sidebar_left.add_widget(bt_export) | |
|
|
76 | ||
|
|
77 | bt_run = Button(text='Run') | |
|
|
78 | bt_run.bind(on_press=self.run) | |
|
|
79 | self.sidebar_left.add_widget(bt_run) | |
|
|
80 | ||
|
|
81 | bt_stop = Button(text='Stop') | |
|
|
82 | bt_stop.bind(on_press = self.stop) | |
|
|
83 | self.sidebar_left.add_widget(bt_stop) | |
|
|
84 | ||
|
|
85 | bt_exit = Button(text = 'Exit', height = 40, size_hint_y = None, background_color=(1, 0, 0, 1)) | |
|
|
86 | bt_exit.bind(on_press=App.get_running_app().stop) | |
|
|
87 | self.sidebar_left.add_widget(bt_exit) | |
|
|
88 | ||
|
|
89 | self.add_widget(self.sidebar_left) | |
|
|
90 | self.add_widget(self.body) | |
|
|
91 | self.add_widget(self.sidebar_right) | |
|
|
92 | ||
|
|
93 | def update_body(self): | |
|
|
94 | ||
|
|
95 | self._units = [] | |
|
|
96 | self.body.clear_widgets() | |
|
|
97 | self.sidebar_right.clear_widgets() | |
|
|
98 | ||
|
|
99 | for unit in self.project.getUnits(): | |
|
|
100 | box = GridLayout(cols=3) | |
|
|
101 | bt = ToggleButton(text=unit.name, group='units') | |
|
|
102 | bt._obj = unit | |
|
|
103 | bt.bind(on_press=self.show_parameters) | |
|
|
104 | box.add_widget(bt) | |
|
|
105 | self._units.append(bt) | |
|
|
106 | ||
|
|
107 | for operation in unit.operations: | |
|
|
108 | bt_op = Button(text = operation.name, background_color=(1, 0.5, 0, 1)) | |
|
|
109 | bt_op._id = unit.id | |
|
|
110 | bt_op._obj = operation | |
|
|
111 | bt_op.bind(on_press=self.show_parameters) | |
|
|
112 | box.add_widget(bt_op) | |
|
|
113 | ||
|
|
114 | self.body.add_widget(box) | |
|
|
115 | ||
|
|
116 | print(self.project) | |
|
|
117 | ||
|
|
118 | def show_parameters(self, instance): | |
|
|
119 | ||
|
|
120 | obj = instance._obj | |
|
|
121 | self.current_unit_id = obj.id | |
|
|
122 | self.sidebar_right.clear_widgets() | |
|
|
123 | ||
|
|
124 | if obj and obj.parameters: | |
|
|
125 | self._params = {} | |
|
|
126 | ||
|
|
127 | for key, value in obj.getParameters().items(): | |
|
|
128 | self.sidebar_right.add_widget(Label(text=key)) | |
|
|
129 | text = TextInput(text=value, multiline=False) | |
|
|
130 | self._params[key] = text | |
|
|
131 | self.sidebar_right.add_widget(text) | |
|
|
132 | ||
|
|
133 | bt_save = Button(text = 'Save', height = 40, size_hint_y = None, background_color=(0, 1, 0, 1)) | |
|
|
134 | bt_save._obj = obj | |
|
|
135 | if hasattr(instance, '_id'): | |
|
|
136 | bt_save._id = instance._id | |
|
|
137 | self.current_unit_id = None | |
|
|
138 | bt_save.bind(on_press=self.save_parameters) | |
|
|
139 | self.sidebar_right.add_widget(bt_save) | |
|
|
140 | ||
|
|
141 | bt_delete = Button(text = 'Delete', height = 40, size_hint_y = None, background_color=(1, 0, 0, 1)) | |
|
|
142 | bt_delete._obj = obj | |
|
|
143 | if hasattr(instance, '_id'): | |
|
|
144 | bt_delete._id = instance._id | |
|
|
145 | self.current_unit_id = obj.id | |
|
|
146 | bt_delete.bind(on_press=self.delete_object) | |
|
|
147 | self.sidebar_right.add_widget(bt_delete) | |
|
|
148 | ||
|
|
149 | def save_parameters(self, instance): | |
|
|
150 | ||
|
|
151 | obj = instance._obj | |
|
|
152 | params = {} | |
|
|
153 | for key in self._params: | |
|
|
154 | if self._params[key]: | |
|
|
155 | params[key] = self._params[key].text | |
|
|
156 | ||
|
|
157 | if hasattr(instance, '_id'): | |
|
|
158 | unit = self.project.getProcUnit(instance._id) | |
|
|
159 | op = unit.getOperation(obj.id) | |
|
|
160 | op.update(**params) | |
|
|
161 | else: | |
|
|
162 | unit = self.project.getProcUnit(obj.id) | |
|
|
163 | unit.update(**params) | |
|
|
164 | ||
|
|
165 | def delete_object(self, instance): | |
|
|
166 | ||
|
|
167 | obj = instance._obj | |
|
|
168 | ||
|
|
169 | if hasattr(instance, '_id'): | |
|
|
170 | unit = self.project.getProcUnit(instance._id) | |
|
|
171 | unit.removeOperation(obj.id) | |
|
|
172 | else: | |
|
|
173 | self.project.removeProcUnit(obj.id) | |
|
|
174 | ||
|
|
175 | self.project.updateId(self.project.id) | |
|
|
176 | self.update_body() | |
|
|
177 | ||
|
|
178 | def show_project(self, instance): | |
|
|
179 | ||
|
|
180 | self.sidebar_right.clear_widgets() | |
|
|
181 | self._params = {} | |
|
|
182 | for label in ['Id', 'Name', 'Description']: | |
|
|
183 | self.sidebar_right.add_widget(Label(text=label)) | |
|
|
184 | text = TextInput(text=getattr(self.project, label.lower()), multiline=False) | |
|
|
185 | self._params[label] = text | |
|
|
186 | self.sidebar_right.add_widget(text) | |
|
|
187 | ||
|
|
188 | self.sidebar_right.add_widget(Label(text='Workspace')) | |
|
|
189 | text = TextInput(text=getattr(self, 'workspace'), multiline=False) | |
|
|
190 | self._params['Workspace'] = text | |
|
|
191 | self.sidebar_right.add_widget(text) | |
|
|
192 | ||
|
|
193 | bt_save = Button(text = 'Save', height = 40, size_hint_y = None, background_color=(0, 1, 0, 1)) | |
|
|
194 | bt_save.bind(on_press = self.save_project_parameters) | |
|
|
195 | self.sidebar_right.add_widget(bt_save) | |
|
|
196 | ||
|
|
197 | def save_project_parameters(self, instance): | |
|
|
198 | ||
|
|
199 | for label in ['Id', 'Name', 'Description']: | |
|
|
200 | setattr(self.project, label.lower(), self._params[label].text) | |
|
|
201 | ||
|
|
202 | setattr(self, 'workspace', self._params['Workspace'].text) | |
|
|
203 | ||
|
|
204 | def select_unit(self, instance): | |
|
|
205 | ||
|
|
206 | self.sidebar_right.clear_widgets() | |
|
|
207 | bt_main = Button(text = 'Select Unit', height = 40, size_hint_y = None) | |
|
|
208 | dropdown = DropDown() | |
|
|
209 | ||
|
|
210 | for unit in cli.getProcs(): | |
|
|
211 | ||
|
|
212 | btn = Button(text = unit, size_hint_y = None, height = 40) | |
|
|
213 | btn.bind(on_release = lambda btn: dropdown.select(btn.text)) | |
|
|
214 | dropdown.add_widget(btn) | |
|
|
215 | ||
|
|
216 | bt_main.bind(on_release = dropdown.open) | |
|
|
217 | dropdown.bind(on_select = lambda instance, x: setattr(bt_main, 'text', x)) | |
|
|
218 | ||
|
|
219 | bt_add = Button(text = 'Add', height = 40, size_hint_y = None, background_color=(0, 1, 0, 1)) | |
|
|
220 | bt_add.bind(on_press = lambda instance: self.add_unit(bt_main.text)) | |
|
|
221 | ||
|
|
222 | self.sidebar_right.add_widget(bt_main) | |
|
|
223 | self.sidebar_right.add_widget(bt_add) | |
|
|
224 | ||
|
|
225 | def add_unit(self, s): | |
|
|
226 | ||
|
|
227 | if s: | |
|
|
228 | if 'Reader' in s: | |
|
|
229 | unit = self.project.addReadUnit(name=s) | |
|
|
230 | else: | |
|
|
231 | *_, last = self.project.getUnits() | |
|
|
232 | unit = self.project.addProcUnit(name=s, inputId=last.id) | |
|
|
233 | ||
|
|
234 | keys = cli.getArgs(unit.name) | |
|
|
235 | values = [DEFAULTS[key] if key in DEFAULTS else '' for key in keys] | |
|
|
236 | unit.update(**dict(zip(keys, values))) | |
|
|
237 | self.update_body() | |
|
|
238 | ||
|
|
239 | def select_operation(self, instance): | |
|
|
240 | ||
|
|
241 | self.sidebar_right.clear_widgets() | |
|
|
242 | btns = [bt.state == 'down' for bt in self._units] | |
|
|
243 | if True in btns: | |
|
|
244 | bt_main = Button(text = 'Select Operation', height = 40, size_hint_y = None) | |
|
|
245 | dropdown = DropDown() | |
|
|
246 | ||
|
|
247 | for unit in cli.getOperations(): | |
|
|
248 | ||
|
|
249 | btn = Button(text = unit, size_hint_y = None, height = 40) | |
|
|
250 | btn.bind(on_release = lambda btn: dropdown.select(btn.text)) | |
|
|
251 | dropdown.add_widget(btn) | |
|
|
252 | ||
|
|
253 | bt_main.bind(on_release = dropdown.open) | |
|
|
254 | dropdown.bind(on_select = lambda instance, x: setattr(bt_main, 'text', x)) | |
|
|
255 | ||
|
|
256 | bt_add = Button(text = 'Add', height = 40, size_hint_y = None, background_color=(0, 1, 0, 1)) | |
|
|
257 | bt_add.bind(on_press = lambda instance: self.add_operation(bt_main.text)) | |
|
|
258 | ||
|
|
259 | self.sidebar_right.add_widget(bt_main) | |
|
|
260 | self.sidebar_right.add_widget(bt_add) | |
|
|
261 | else: | |
|
|
262 | self.sidebar_right.add_widget(Label(text='Select Unit')) | |
|
|
263 | ||
|
|
264 | def add_operation(self, s): | |
|
|
265 | ||
|
|
266 | if s: | |
|
|
267 | unit = self.project.getProcUnit(self.current_unit_id) | |
|
|
268 | op = unit.addOperation(name=s) | |
|
|
269 | keys = cli.getArgs(op.name) | |
|
|
270 | values = [DEFAULTS[key] if key in DEFAULTS else '' for key in keys] | |
|
|
271 | op.update(**dict(zip(keys, values))) | |
|
|
272 | self.update_body() | |
|
|
273 | ||
|
|
274 | def run(self, instance): | |
|
|
275 | ||
|
|
276 | if self.project and self.project.is_alive(): | |
|
|
277 | self.sidebar_right.clear_widgets() | |
|
|
278 | self.sidebar_right.add_widget(Label(text='Project running')) | |
|
|
279 | else: | |
|
|
280 | if self.project.exitcode is None: | |
|
|
281 | self.project.start() | |
|
|
282 | else: | |
|
|
283 | self.project = self.project.clone() | |
|
|
284 | self.project.start() | |
|
|
285 | ||
|
|
286 | def stop(self, instance): | |
|
|
287 | ||
|
|
288 | if self.project and self.project.is_alive(): | |
|
|
289 | self.project.kill() | |
|
|
290 | log.error('Project Stopped by user', 'GUI') | |
|
|
291 | else: | |
|
|
292 | self.sidebar_right.clear_widgets() | |
|
|
293 | self.sidebar_right.add_widget(Label(text='Project not running')) | |
|
|
294 | ||
|
|
295 | def load(self, instance): | |
|
|
296 | ||
|
|
297 | self.sidebar_right.clear_widgets() | |
|
|
298 | textinput = FileChooserListView( | |
|
|
299 | path=self.workspace, size_hint=(1, 1), dirselect=False, filters=['*.xml']) | |
|
|
18 | 300 | |
|
|
19 | def main(): | |
|
|
301 | self.sidebar_right.add_widget(textinput) | |
|
|
302 | bt_open = Button(text = 'Open', height = 40, size_hint_y = None, background_color=(0, 1, 0, 1)) | |
|
|
303 | bt_open.textinput = textinput | |
|
|
304 | bt_open.bind(on_press = self.load_file) | |
|
|
305 | self.sidebar_right.add_widget(bt_open) | |
|
|
306 | ||
|
|
307 | def load_file(self, instance): | |
|
|
20 | 308 | |
|
|
21 | app = QtGui.QApplication(sys.argv) | |
|
|
309 | self.project.readXml(instance.textinput.selection[0]) | |
|
|
310 | self.update_body() | |
|
|
22 | 311 | |
|
|
23 | Welcome = InitWindow() | |
|
|
312 | def export(self, instance): | |
|
|
24 | 313 | |
|
|
25 | if not Welcome.exec_(): | |
|
|
26 | sys.exit(-1) | |
|
|
314 | filename = os.path.join(self.workspace, '{}.xml'.format(self.project.name)) | |
|
|
315 | self.project.writeXml(filename) | |
|
|
316 | log.success('File created: {}'.format(filename), 'GUI') | |
|
|
27 | 317 | |
|
|
28 | WorkPathspace = Workspace() | |
|
|
29 | if not WorkPathspace.exec_(): | |
|
|
30 | sys.exit(-1) | |
|
|
31 | 318 | |
|
|
32 | MainGUI = BasicWindow() | |
|
|
33 | MainGUI.setWorkSpaceGUI(WorkPathspace.dirComBox.currentText()) | |
|
|
34 | MainGUI.show() | |
|
|
35 | sys.exit(app.exec_()) | |
|
|
319 | class SignalChainApp(App): | |
|
|
320 | def build(self): | |
|
|
321 | return MainLayout(spacing=10) | |
|
|
36 | 322 | |
|
|
37 | 323 | |
|
|
38 | 324 | if __name__ == "__main__": |
|
|
39 | main() | |
|
|
325 | SignalChainApp().run() No newline at end of file | |
|
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1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
|
|
1 | NO CONTENT: file was removed | |
| The requested commit or file is too big and content was truncated. Show full diff | |||
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