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1 | This software, unless otherwise noted, is licensed under the BSD 3-clause. | |||
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2 | ||||
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3 | Copyright (c) 2012-2020 Jicamarca Radio Observatory | |||
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4 | ||||
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5 | Redistribution and use in source and binary forms, with or without | |||
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6 | modification, are permitted provided that the following conditions are met: | |||
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7 | ||||
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8 | * Redistributions of source code must retain the above copyright notice, this | |||
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9 | list of conditions and the following disclaimer. | |||
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10 | ||||
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11 | * Redistributions in binary form must reproduce the above copyright notice, | |||
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12 | this list of conditions and the following disclaimer in the documentation | |||
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13 | and/or other materials provided with the distribution. | |||
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14 | ||||
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15 | * Neither the name of the copyright holder nor the names of its | |||
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16 | contributors may be used to endorse or promote products derived from | |||
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17 | this software without specific prior written permission. | |||
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18 | ||||
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19 | THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" | |||
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20 | AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE | |||
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21 | IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE | |||
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22 | DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE | |||
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23 | FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL | |||
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24 | DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR | |||
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25 | SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER | |||
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26 | CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, | |||
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27 | OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE | |||
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28 | OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. |
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1 | #include <Python.h> | |||
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2 | #include <numpy/arrayobject.h> | |||
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3 | #include <math.h> | |||
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4 | ||||
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5 | ||||
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6 | static PyObject *hildebrand_sekhon(PyObject *self, PyObject *args) { | |||
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7 | double navg; | |||
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8 | PyObject *data_obj, *data_array; | |||
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9 | ||||
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10 | if (!PyArg_ParseTuple(args, "Od", &data_obj, &navg)) { | |||
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11 | return NULL; | |||
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12 | } | |||
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13 | ||||
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14 | data_array = PyArray_FROM_OTF(data_obj, NPY_FLOAT64, NPY_IN_ARRAY); | |||
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15 | ||||
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16 | if (data_array == NULL) { | |||
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17 | Py_XDECREF(data_array); | |||
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18 | Py_XDECREF(data_obj); | |||
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19 | return NULL; | |||
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20 | } | |||
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21 | double *sortdata = (double*)PyArray_DATA(data_array); | |||
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22 | int lenOfData = (int)PyArray_SIZE(data_array) ; | |||
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23 | double nums_min = lenOfData*0.2; | |||
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24 | if (nums_min <= 5) nums_min = 5; | |||
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25 | double sump = 0; | |||
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26 | double sumq = 0; | |||
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27 | long j = 0; | |||
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28 | int cont = 1; | |||
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29 | double rtest = 0; | |||
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30 | while ((cont == 1) && (j < lenOfData)) { | |||
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31 | sump = sump + sortdata[j]; | |||
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32 | sumq = sumq + pow(sortdata[j], 2); | |||
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33 | if (j > nums_min) { | |||
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34 | rtest = (double)j/(j-1) + 1/navg; | |||
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35 | if ((sumq*j) > (rtest*pow(sump, 2))) { | |||
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36 | j = j - 1; | |||
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37 | sump = sump - sortdata[j]; | |||
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38 | sumq = sumq - pow(sortdata[j],2); | |||
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39 | cont = 0; | |||
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40 | } | |||
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41 | } | |||
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42 | j = j + 1; | |||
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43 | } | |||
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44 | ||||
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45 | double lnoise = sump / j; | |||
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46 | ||||
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47 | Py_DECREF(data_array); | |||
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48 | ||||
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49 | // return PyLong_FromLong(lnoise); | |||
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50 | return PyFloat_FromDouble(lnoise); | |||
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51 | } | |||
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52 | ||||
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53 | ||||
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54 | static PyMethodDef noiseMethods[] = { | |||
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55 | { "hildebrand_sekhon", hildebrand_sekhon, METH_VARARGS, "Get noise with hildebrand_sekhon algorithm" }, | |||
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56 | { NULL, NULL, 0, NULL } | |||
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57 | }; | |||
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58 | ||||
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59 | #if PY_MAJOR_VERSION >= 3 | |||
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60 | ||||
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61 | static struct PyModuleDef noisemodule = { | |||
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62 | PyModuleDef_HEAD_INIT, | |||
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63 | "_noise", | |||
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64 | "Get noise with hildebrand_sekhon algorithm", | |||
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65 | -1, | |||
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66 | noiseMethods | |||
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67 | }; | |||
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68 | ||||
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69 | #endif | |||
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70 | ||||
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71 | #if PY_MAJOR_VERSION >= 3 | |||
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72 | PyMODINIT_FUNC PyInit__noise(void) { | |||
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73 | Py_Initialize(); | |||
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74 | import_array(); | |||
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75 | return PyModule_Create(&noisemodule); | |||
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76 | } | |||
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77 | #else | |||
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78 | PyMODINIT_FUNC init_noise() { | |||
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79 | Py_InitModule("_noise", noiseMethods); | |||
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80 | import_array(); | |||
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81 | } | |||
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82 | #endif |
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@@ -100,15 +100,3 ENV/ | |||||
100 | # eclipse |
|
100 | # eclipse | |
101 | .project |
|
101 | .project | |
102 | .pydevproject |
|
102 | .pydevproject | |
103 | # vscode |
|
|||
104 |
|
||||
105 | .vscode |
|
|||
106 |
|
||||
107 | schaingui/node_modules/ |
|
|||
108 | schainpy/scripts/ |
|
|||
109 | .svn/ |
|
|||
110 | *.png |
|
|||
111 | *.pyc |
|
|||
112 | .vscode |
|
|||
113 | trash |
|
|||
114 | *.log |
|
@@ -1,13 +1,19 | |||||
1 |
|
|
1 | # CHANGELOG | |
2 |
|
2 | |||
3 |
## |
|
3 | ## 3.0.0 | |
4 | * Python 3.x compatible |
|
4 | ||
5 | * New architecture with multiprocessing and IPC communication |
|
5 | * Python 3.x & 2.X compatible | |
6 | * Add @MPDecorator for multiprocessing Units and Operations |
|
6 | * New architecture with multiprocessing support | |
|
7 | * Add @MPDecorator for multiprocessing Operations (Plots, Writers and Publishers) | |||
7 | * Added new type of operation `external` for non-locking operations |
|
8 | * Added new type of operation `external` for non-locking operations | |
8 | * New plotting architecture with buffering/throttle capabilities to speed up plots |
|
9 | * New plotting architecture with buffering/throttle capabilities to speed up plots | |
|
10 | * Clean controller to optimize scripts (format & optype are no longer required) | |||
|
11 | * Replace `ParamReader` and `ParamWriter` with new flexible `HDFReader` and `HDFWriter` | |||
|
12 | * New GUI with dynamic load of Units and operations (use Kivy framework) | |||
|
13 | * Clean code | |||
|
14 | ||||
|
15 | ## 2.3 | |||
9 |
|
16 | |||
10 | ### 2.3 |
|
|||
11 | * Added support for Madrigal formats (reading/writing). |
|
17 | * Added support for Madrigal formats (reading/writing). | |
12 | * Added support for reading BLTR parameters (*.sswma). |
|
18 | * Added support for reading BLTR parameters (*.sswma). | |
13 | * Added support for reading Julia format (*.dat). |
|
19 | * Added support for reading Julia format (*.dat). | |
@@ -15,11 +21,11 | |||||
15 | * Added two new Processing Units `PublishData` and `ReceiverData` for receiving and sending dataOut through multiple ways (tcp, ipc, inproc). |
|
21 | * Added two new Processing Units `PublishData` and `ReceiverData` for receiving and sending dataOut through multiple ways (tcp, ipc, inproc). | |
16 | * Added a new graphics Processing Unit `PlotterReceiver`. It is decoupled from normal processing sequence with support for data generated by multiprocessing scripts. |
|
22 | * Added a new graphics Processing Unit `PlotterReceiver`. It is decoupled from normal processing sequence with support for data generated by multiprocessing scripts. | |
17 | * Added support for sending realtime graphic to web server. |
|
23 | * Added support for sending realtime graphic to web server. | |
18 |
* GUI command `schain` is now `schainGUI`. |
|
24 | * GUI command `schain` is now `schainGUI`. | |
19 |
* Added a CLI tool named `schain`. |
|
25 | * Added a CLI tool named `schain`. | |
20 |
|
|
26 | * Scripts templates can be now generated with `schain generate`. | |
21 |
|
|
27 | * Now it is possible to search Processing Units and Operations with `schain search [module]` to get the right name and its allowed parameters. | |
22 |
|
|
28 | * `schain xml` to run xml scripts. | |
23 | * Added suggestions when parameters are poorly written. |
|
29 | * Added suggestions when parameters are poorly written. | |
24 | * `Controller.start()` now runs in a different process than the process calling it. |
|
30 | * `Controller.start()` now runs in a different process than the process calling it. | |
25 | * Added `schainpy.utils.log` for log standarization. |
|
31 | * Added `schainpy.utils.log` for log standarization. | |
@@ -28,92 +34,108 | |||||
28 | * Updated README for MAC OS GUI installation. |
|
34 | * Updated README for MAC OS GUI installation. | |
29 | * Setup now installs numpy. |
|
35 | * Setup now installs numpy. | |
30 |
|
36 | |||
31 |
## |
|
37 | ## 2.2.6 | |
|
38 | ||||
32 | * Graphics generated by the GUI are now the same as generated by scripts. Issue #1074. |
|
39 | * Graphics generated by the GUI are now the same as generated by scripts. Issue #1074. | |
33 | * Added support for C extensions. |
|
40 | * Added support for C extensions. | |
34 | * Function `hildebrand_sehkon` optimized with a C wrapper. |
|
41 | * Function `hildebrand_sehkon` optimized with a C wrapper. | |
35 | * Numpy version updated. |
|
42 | * Numpy version updated. | |
36 | * Migration to GIT. |
|
43 | * Migration to GIT. | |
37 |
|
44 | |||
38 |
## |
|
45 | ## 2.2.5 | |
|
46 | ||||
39 | * splitProfiles and combineProfiles modules were added to VoltageProc and Signal Chain GUI. |
|
47 | * splitProfiles and combineProfiles modules were added to VoltageProc and Signal Chain GUI. | |
40 | * nProfiles of USRP data (hdf5) is the number of profiles thera are in one second. |
|
48 | * nProfiles of USRP data (hdf5) is the number of profiles thera are in one second. | |
41 | * jroPlotter works directly with data objects instead of dictionaries |
|
49 | * jroPlotter works directly with data objects instead of dictionaries | |
42 | * script "schain" was added to Signal Chain installer |
|
50 | * script "schain" was added to Signal Chain installer | |
43 |
|
51 | |||
44 |
## |
|
52 | ## 2.2.4.1 | |
45 | * jroIO_usrp.py is update to read Sandra's data |
|
53 | ||
|
54 | * jroIO_usrp.py is update to read Sandra's data | |||
46 | * decimation in Spectra and RTI plots is always enabled. |
|
55 | * decimation in Spectra and RTI plots is always enabled. | |
47 | * time* window option added to GUI |
|
56 | * time* window option added to GUI | |
48 |
|
57 | |||
49 |
## |
|
58 | ## 2.2.4 | |
|
59 | ||||
50 | * jroproc_spectra_lags.py added to schainpy |
|
60 | * jroproc_spectra_lags.py added to schainpy | |
51 | * Bug fixed in schainGUI: ProcUnit was created with the same id in some cases. |
|
61 | * Bug fixed in schainGUI: ProcUnit was created with the same id in some cases. | |
52 | * Bug fixed in jroHeaderIO: Header size validation. |
|
62 | * Bug fixed in jroHeaderIO: Header size validation. | |
53 |
|
63 | |||
54 |
## |
|
64 | ## 2.2.3.1 | |
|
65 | ||||
55 | * Filtering block by time has been added. |
|
66 | * Filtering block by time has been added. | |
56 | * Bug fixed plotting RTI, CoherenceMap and others using xmin and xmax parameters. The first day worked |
|
67 | * Bug fixed plotting RTI, CoherenceMap and others using xmin and xmax parameters. The first day worked | |
57 | properly but the next days did not. |
|
68 | properly but the next days did not. | |
58 |
|
69 | |||
59 |
## |
|
70 | ## 2.2.3 | |
|
71 | ||||
60 | * Bug fixed in GUI: Error getting(reading) Code value |
|
72 | * Bug fixed in GUI: Error getting(reading) Code value | |
61 | * Bug fixed in GUI: Flip option always needs channelList field |
|
73 | * Bug fixed in GUI: Flip option always needs channelList field | |
62 | * Bug fixed in jrodata: when one branch modified a value in "dataOut" (example: dataOut.code) this value |
|
74 | * Bug fixed in jrodata: when one branch modified a value in "dataOut" (example: dataOut.code) this value | |
63 | was modified for every branch (because this was a reference). It was modified in data.copy() |
|
75 | was modified for every branch (because this was a reference). It was modified in data.copy() | |
64 | * Bug fixed in jroproc_voltage.profileSelector(): rangeList replaces to profileRangeList. |
|
76 | * Bug fixed in jroproc_voltage.profileSelector(): rangeList replaces to profileRangeList. | |
65 |
|
77 | |||
66 |
## |
|
78 | ## 2.2.2 | |
|
79 | ||||
67 | * VoltageProc: ProfileSelector, Reshape, Decoder with nTxs!=1 and getblock=True was tested |
|
80 | * VoltageProc: ProfileSelector, Reshape, Decoder with nTxs!=1 and getblock=True was tested | |
68 | * Rawdata and testRawdata.py added to Signal Chain project |
|
81 | * Rawdata and testRawdata.py added to Signal Chain project | |
69 |
|
82 | |||
70 |
## |
|
83 | ## 2.2.1 | |
|
84 | ||||
71 | * Bugs fixed in GUI |
|
85 | * Bugs fixed in GUI | |
72 | * Views were improved in GUI |
|
86 | * Views were improved in GUI | |
73 | * Support to MST* ISR experiments |
|
87 | * Support to MST* ISR experiments | |
74 | * Bug fixed getting noise using hyldebrant. (minimum number of points > 20%) |
|
88 | * Bug fixed getting noise using hyldebrant. (minimum number of points > 20%) | |
75 | * handleError added to jroplotter.py |
|
89 | * handleError added to jroplotter.py | |
76 |
|
90 | |||
77 |
## |
|
91 | ## 2.2.0 | |
|
92 | ||||
78 | * GUI: use of external plotter |
|
93 | * GUI: use of external plotter | |
79 | * Compatible with matplotlib 1.5.0 |
|
94 | * Compatible with matplotlib 1.5.0 | |
80 |
|
95 | |||
81 |
## |
|
96 | ## 2.1.5 | |
|
97 | ||||
82 | * serializer module added to Signal Chain |
|
98 | * serializer module added to Signal Chain | |
83 | * jroplotter.py added to Signal Chain |
|
99 | * jroplotter.py added to Signal Chain | |
84 |
|
100 | |||
85 |
## |
|
101 | ## 2.1.4.2 | |
|
102 | ||||
86 | * A new Plotter Class was added |
|
103 | * A new Plotter Class was added | |
87 | * Project.start() does not accept filename as a parameter anymore |
|
104 | * Project.start() does not accept filename as a parameter anymore | |
88 |
|
105 | |||
89 |
## |
|
106 | ## 2.1.4.1 | |
|
107 | ||||
90 | * Send notifications when an error different to ValueError is detected |
|
108 | * Send notifications when an error different to ValueError is detected | |
91 |
|
109 | |||
92 |
## |
|
110 | ## 2.1.4 | |
|
111 | ||||
93 | * Sending error notifications to signal chain administrator |
|
112 | * Sending error notifications to signal chain administrator | |
94 | * Login to email server added |
|
113 | * Login to email server added | |
95 |
|
114 | |||
96 |
## |
|
115 | ## 2.1.3.3 | |
|
116 | ||||
97 | * Colored Button Icons were added to GUI |
|
117 | * Colored Button Icons were added to GUI | |
98 |
|
118 | |||
99 |
## |
|
119 | ## 2.1.3.2 | |
|
120 | ||||
100 | * GUI: user interaction enhanced |
|
121 | * GUI: user interaction enhanced | |
101 | * controller_api.py: Safe access to ControllerThead |
|
122 | * controller_api.py: Safe access to ControllerThead | |
102 |
|
123 | |||
103 |
## |
|
124 | ## 2.1.3.1 | |
|
125 | ||||
104 | * GUI: every icon were resized |
|
126 | * GUI: every icon were resized | |
105 | * jroproc_voltage.py: Print a message when "Read from code" option is selected and the code is not defined inside data file |
|
127 | * jroproc_voltage.py: Print a message when "Read from code" option is selected and the code is not defined inside data file | |
106 |
|
128 | |||
107 |
## |
|
129 | ## 2.1.3 | |
|
130 | ||||
108 | * jroplot_heispectra.py: SpectraHeisScope was not showing the right channels |
|
131 | * jroplot_heispectra.py: SpectraHeisScope was not showing the right channels | |
109 | * jroproc_voltage.py: Bug fixed selecting profiles (self.nProfiles took a wrong value), |
|
132 | * jroproc_voltage.py: Bug fixed selecting profiles (self.nProfiles took a wrong value), Bug fixed selecting heights by block (selecting profiles instead heights) | |
110 | Bug fixed selecting heights by block (selecting profiles instead heights) |
|
|||
111 | * jroproc_voltage.py: New feature added: decoding data by block using FFT. |
|
133 | * jroproc_voltage.py: New feature added: decoding data by block using FFT. | |
112 | * jroIO_heispectra.py: Bug fixed in FitsReader. Using local Fits instance instead schainpy.mode.data.jrodata.Fits. |
|
134 | * jroIO_heispectra.py: Bug fixed in FitsReader. Using local Fits instance instead schainpy.mode.data.jrodata.Fits. | |
113 | * jroIO_heispectra.py: Channel index list does not exist. |
|
135 | * jroIO_heispectra.py: Channel index list does not exist. | |
114 |
|
136 | |||
115 |
## |
|
137 | ## 2.1.2 | |
116 | * jroutils_ftp.py: Bug fixed, Any error sending file stopped the Server Thread |
|
138 | ||
117 |
|
|
139 | * jroutils_ftp.py: Bug fixed, Any error sending file stopped the Server Thread Server thread opens and closes remote server each time file list is sent | |
118 | * jroplot_spectra.py: Noise path was not being created when noise data is saved. |
|
140 | * jroplot_spectra.py: Noise path was not being created when noise data is saved. | |
119 |
* jroIO_base.py: startTime can be greater than endTime. Example: SpreadF |
|
141 | * jroIO_base.py: startTime can be greater than endTime. Example: SpreadF |
@@ -1,155 +1,104 | |||||
1 | # Signal Chain |
|
1 | # Signal Chain | |
2 |
|
2 | |||
3 | ## Introduction |
|
3 | Signal Chain is a radar data processing library wich includes modules to read, | |
|
4 | and write different files formats, besides modules to process and visualize the | |||
|
5 | data. | |||
4 |
|
6 | |||
5 | Signal Chain (SCh) is a radar data processing library developed using [Python](www.python.org) at JRO. SCh provides modules to read, write, process and plot data. |
|
7 | ## Dependencies | |
6 |
|
8 | |||
7 | ## Installation |
|
9 | - GCC (gcc or gfortran) | |
8 |
|
10 | - Python.h (python-dev or python-devel) | ||
9 | Install system dependencies, clone the latest version from [here](http://jro-dev.igp.gob.pe/rhodecode/schain/) and install it as a normal python package. |
|
11 | - Python-TK (python-tk) | |
|
12 | - HDF5 libraries (libhdf5-dev) | |||
10 |
|
13 | |||
11 | ### Linux based system |
|
14 | ## Installation | |
12 | ``` |
|
|||
13 | $ sudo apt-get install python-pip python-dev gfortran libpng-dev freetype* libblas-dev liblapack-dev libatlas-base-dev python-qt4 python-tk libssl-dev libhdf5-dev |
|
|||
14 | $ git clone http://jro-dev.igp.gob.pe/rhodecode/schain/ |
|
|||
15 | $ cd schain |
|
|||
16 | $ sudo pip install ./ |
|
|||
17 |
|
||||
18 | ``` |
|
|||
19 |
|
15 | |||
20 | ### MAC Os |
|
16 | To get started the easiest way to install it is through | |
21 | ``` |
|
17 | [PyPI](https://pypi.org/project/schainpy/) with pip. We strongly recommend to | |
22 | $ brew install python |
|
18 | use an virtual environment like virtualenv or anaconda. | |
23 | $ brew install cartr/qt4/pyqt |
|
|||
24 | $ git clone http://jro-dev.igp.gob.pe/rhodecode/schain/ |
|
|||
25 | $ cd schain |
|
|||
26 | $ pip install ./ |
|
|||
27 | ``` |
|
|||
28 |
|
19 | |||
29 | **It is recommended to install schain in a virtual environment** |
|
20 | ```bash | |
30 | ``` |
|
21 | pip install schainpy | |
31 | $ virtualenv /path/to/virtual |
|
|||
32 | $ source /path/to/virtual/bin/activate |
|
|||
33 | (virtual) $ cd schain |
|
|||
34 | (virtual) $ pip install ./ |
|
|||
35 | (virtual) $ bash link_PyQt4.sh |
|
|||
36 | ``` |
|
22 | ``` | |
37 |
|
23 | |||
38 | ### Docker |
|
24 | ### From source | |
39 |
|
25 | |||
40 | Download Dockerfile from the repository, and create a docker image |
|
26 | First, ensure that you have the above-listed dependencies installed, then clone | |
|
27 | the repository and install as normal python package: | |||
41 |
|
28 | |||
|
29 | ```bash | |||
|
30 | git clone https://github.com/JRO-Peru/schainpy.git | |||
|
31 | cd schain | |||
|
32 | git checkout `branch-name` (optional) | |||
|
33 | sudo pip install ./ | |||
42 | ``` |
|
34 | ``` | |
43 | $ docker build -t schain . |
|
|||
44 | ``` |
|
|||
45 |
|
||||
46 | You can run a container using an xml file or a schain script also you need to mount a volume for the data input and for the output files/plots |
|
|||
47 | ``` |
|
|||
48 | $ docker run -it --rm --volume /path/to/host/data:/data schain xml /data/test.xml |
|
|||
49 | $ docker run -it --rm --volume /path/to/host/data:/data --entrypoint /urs/local/bin/python schain /data/test.py |
|
|||
50 | ``` |
|
|||
51 |
|
||||
52 | ## First Script |
|
|||
53 |
|
||||
54 | Read Spectra data (.pdata) - remove dc - plot spectra & RTI |
|
|||
55 |
|
||||
56 | Import SCh and creating a project |
|
|||
57 |
|
||||
58 | ```python |
|
|||
59 | #!/usr/bin/python |
|
|||
60 |
|
35 | |||
61 | from schainpy.controller import Project |
|
36 | ### Using Docker | |
62 |
|
||||
63 | controller = Project() |
|
|||
64 | controller.setup(id = '100', |
|
|||
65 | name='test', |
|
|||
66 | description='Basic experiment') |
|
|||
67 |
|
37 | |||
|
38 | Download Dockerfile from the repository, and create a docker image: | |||
68 |
|
39 | |||
|
40 | ```bash | |||
|
41 | docker build -t schain . | |||
69 | ``` |
|
42 | ``` | |
70 |
|
43 | |||
71 | Adding read unit and operations |
|
44 | You can run a container using an xml file or a schain script also you need to | |
72 |
|
45 | mount a volume for the data input and for the output files/plots: | ||
73 | ```python |
|
|||
74 | read_unit = controller.addReadUnit(datatype='Spectra', |
|
|||
75 | path='/path/to/pdata/', |
|
|||
76 | startDate='2014/01/31', |
|
|||
77 | endDate='2014/03/31', |
|
|||
78 | startTime='00:00:00', |
|
|||
79 | endTime='23:59:59', |
|
|||
80 | online=0, |
|
|||
81 | walk=0) |
|
|||
82 |
|
||||
83 | proc_unit = controller.addProcUnit(datatype='Spectra', |
|
|||
84 | inputId=read_unit.getId()) |
|
|||
85 |
|
||||
86 | op = proc_unit.addOperation(name='selectChannels') |
|
|||
87 | op.addParameter(name='channelList', value='0,1', format='intlist') |
|
|||
88 |
|
||||
89 | op = proc_unit.addOperation(name='selectHeights') |
|
|||
90 | op.addParameter(name='minHei', value='80', format='float') |
|
|||
91 | op.addParameter(name='maxHei', value='200', format='float') |
|
|||
92 |
|
||||
93 | op = proc_unit.addOperation(name='removeDC') |
|
|||
94 |
|
46 | |||
|
47 | ```bash | |||
|
48 | docker run -it --rm --volume /path/to/host/data:/data schain xml /data/test.xml | |||
|
49 | docker run -it --rm --volume /path/to/host/data:/data --entrypoint /urs/local/bin/python schain /data/test.py | |||
95 | ``` |
|
50 | ``` | |
96 |
|
51 | |||
97 | Plotting data & start project |
|
52 | ## CLI (command line interface) | |
98 |
|
53 | |||
99 | ```python |
|
54 | Signal Chain provides the following commands: | |
100 | op = proc_unit.addOperation(name='SpectraPlot', optype='other') |
|
|||
101 | op.addParameter(name='id', value='1', format='int') |
|
|||
102 | op.addParameter(name='wintitle', value='Spectra', format='str') |
|
|||
103 |
|
55 | |||
104 | op = procUnitConfObj1.addOperation(name='RTIPlot', optype='other') |
|
56 | - schainGUI: Open the GUI | |
105 | op.addParameter(name='id', value='2', format='int') |
|
57 | - schain: Signal chain command line | |
106 | op.addParameter(name='wintitle', value='RTI', format='str') |
|
|||
107 |
|
58 | |||
108 | controller.start() |
|
59 | ## Example | |
109 |
|
||||
110 | ``` |
|
|||
111 |
|
||||
112 | Full script |
|
|||
113 |
|
60 | |||
|
61 | Here you can find an script to read Spectra data (.pdata), remove dc and plot | |||
|
62 | self-spectra & RTI: | |||
114 |
|
63 | |||
115 | ```python |
|
64 | ```python | |
116 | #!/usr/bin/python |
|
65 | #!/usr/bin/python | |
117 |
|
66 | |||
118 | from schainpy.controller import Project |
|
67 | from schainpy.controller import Project | |
119 |
|
68 | |||
120 |
|
|
69 | prj = Project() | |
121 | controller.setup(id = '100', |
|
70 | ||
122 | name='test', |
|
71 | read_unit = prj.addReadUnit( | |
123 | description='Basic experiment') |
|
72 | datatype='Spectra', | |
124 | read_unit = controller.addReadUnit(datatype='Spectra', |
|
73 | path='/path/to/pdata/', | |
125 | path='/path/to/pdata/', |
|
74 | startDate='2014/01/31', | |
126 | startDate='2014/01/31', |
|
75 | endDate='2014/03/31', | |
127 | endDate='2014/03/31', |
|
76 | startTime='00:00:00', | |
128 | startTime='00:00:00', |
|
77 | endTime='23:59:59', | |
129 | endTime='23:59:59', |
|
78 | online=0, | |
130 | online=0, |
|
79 | walk=0 | |
131 | walk=0) |
|
80 | ) | |
132 |
|
81 | |||
133 |
proc_unit = |
|
82 | proc_unit = prj.addProcUnit( | |
134 | inputId=read_unit.getId()) |
|
83 | datatype='Spectra', | |
|
84 | inputId=read_unit.getId() | |||
|
85 | ) | |||
135 |
|
86 | |||
136 | op = proc_unit.addOperation(name='selectChannels') |
|
87 | op = proc_unit.addOperation(name='selectChannels') | |
137 |
op.addParameter(name='channelList', value='0,1' |
|
88 | op.addParameter(name='channelList', value='0,1') | |
138 |
|
89 | |||
139 | op = proc_unit.addOperation(name='selectHeights') |
|
90 | op = proc_unit.addOperation(name='selectHeights') | |
140 |
op.addParameter(name='minHei', value='80' |
|
91 | op.addParameter(name='minHei', value='80') | |
141 |
op.addParameter(name='maxHei', value='200' |
|
92 | op.addParameter(name='maxHei', value='200') | |
142 |
|
93 | |||
143 | op = proc_unit.addOperation(name='removeDC') |
|
94 | op = proc_unit.addOperation(name='removeDC') | |
144 |
|
95 | |||
145 |
op = proc_unit.addOperation(name='SpectraPlot' |
|
96 | op = proc_unit.addOperation(name='SpectraPlot') | |
146 | op.addParameter(name='id', value='6', format='int') |
|
|||
147 | op.addParameter(name='wintitle', value='Spectra', format='str') |
|
97 | op.addParameter(name='wintitle', value='Spectra', format='str') | |
148 |
|
98 | |||
149 |
op = proc |
|
99 | op = proc_unit.addOperation(name='RTIPlot') | |
150 | op.addParameter(name='id', value='2', format='int') |
|
|||
151 | op.addParameter(name='wintitle', value='RTI', format='str') |
|
100 | op.addParameter(name='wintitle', value='RTI', format='str') | |
152 |
|
101 | |||
153 |
|
|
102 | prj.start() | |
154 |
|
103 | |||
155 | ``` No newline at end of file |
|
104 | ``` |
@@ -1,7 +1,8 | |||||
1 | ''' |
|
1 | """Signal chain python package""" | |
2 | Created on Jul 3, 2018 |
|
|||
3 |
|
2 | |||
4 | @author $Author$ |
|
3 | try: | |
5 | @version $Id$ |
|
4 | from schainpy.controller import Project | |
6 | ''' |
|
5 | except: | |
7 | __version__ = '3.0' |
|
6 | pass | |
|
7 | ||||
|
8 | __version__ = '3.0.0b6' |
@@ -1,12 +1,9 | |||||
1 | import click |
|
1 | import click | |
2 | import schainpy |
|
|||
3 | import subprocess |
|
2 | import subprocess | |
4 | import os |
|
3 | import os | |
5 | import sys |
|
4 | import sys | |
6 | import glob |
|
5 | import glob | |
7 | save_stdout = sys.stdout |
|
6 | import schainpy | |
8 | sys.stdout = open('/dev/null', 'w') |
|
|||
9 | from multiprocessing import cpu_count |
|
|||
10 | from schainpy.controller import Project |
|
7 | from schainpy.controller import Project | |
11 | from schainpy.model import Operation, ProcessingUnit |
|
8 | from schainpy.model import Operation, ProcessingUnit | |
12 | from schainpy.utils import log |
|
9 | from schainpy.utils import log | |
@@ -19,7 +16,6 try: | |||||
19 | from queue import Queue |
|
16 | from queue import Queue | |
20 | except: |
|
17 | except: | |
21 | from Queue import Queue |
|
18 | from Queue import Queue | |
22 | sys.stdout = save_stdout |
|
|||
23 |
|
19 | |||
24 |
|
20 | |||
25 | def getProcs(): |
|
21 | def getProcs(): | |
@@ -45,11 +41,19 def getOperations(): | |||||
45 |
|
41 | |||
46 | def getArgs(op): |
|
42 | def getArgs(op): | |
47 | module = locate('schainpy.model.{}'.format(op)) |
|
43 | module = locate('schainpy.model.{}'.format(op)) | |
48 |
|
44 | try: | ||
49 | if hasattr(module, '__attrs__'): |
|
45 | obj = module(1, 2, 3, Queue()) | |
50 | args = module.__attrs__ |
|
46 | except: | |
|
47 | obj = module() | |||
|
48 | ||||
|
49 | if hasattr(obj, '__attrs__'): | |||
|
50 | args = obj.__attrs__ | |||
51 | else: |
|
51 | else: | |
52 | args = inspect.getargspec(module.run).args |
|
52 | if hasattr(obj, 'myrun'): | |
|
53 | args = inspect.getfullargspec(obj.myrun).args | |||
|
54 | else: | |||
|
55 | args = inspect.getfullargspec(obj.run).args | |||
|
56 | ||||
53 | try: |
|
57 | try: | |
54 | args.remove('self') |
|
58 | args.remove('self') | |
55 | except Exception as e: |
|
59 | except Exception as e: | |
@@ -63,7 +67,7 def getArgs(op): | |||||
63 | def getDoc(obj): |
|
67 | def getDoc(obj): | |
64 | module = locate('schainpy.model.{}'.format(obj)) |
|
68 | module = locate('schainpy.model.{}'.format(obj)) | |
65 | try: |
|
69 | try: | |
66 |
obj = module(1,2,3,Queue() |
|
70 | obj = module(1, 2, 3, Queue()) | |
67 | except: |
|
71 | except: | |
68 | obj = module() |
|
72 | obj = module() | |
69 | return obj.__doc__ |
|
73 | return obj.__doc__ | |
@@ -89,9 +93,9 PREFIX = 'experiment' | |||||
89 | @click.argument('nextcommand', default=None, required=False, type=str) |
|
93 | @click.argument('nextcommand', default=None, required=False, type=str) | |
90 | def main(command, nextcommand, version): |
|
94 | def main(command, nextcommand, version): | |
91 | """COMMAND LINE INTERFACE FOR SIGNAL CHAIN - JICAMARCA RADIO OBSERVATORY V3.0\n |
|
95 | """COMMAND LINE INTERFACE FOR SIGNAL CHAIN - JICAMARCA RADIO OBSERVATORY V3.0\n | |
92 |
Available commands |
|
96 | Available commands:\n | |
93 | xml: runs a schain XML generated file\n |
|
97 | xml: runs a schain XML generated file\n | |
94 |
run: runs any python script |
|
98 | run: runs any python script'\n | |
95 | generate: generates a template schain script\n |
|
99 | generate: generates a template schain script\n | |
96 | list: return a list of available procs and operations\n |
|
100 | list: return a list of available procs and operations\n | |
97 | search: return avilable operations, procs or arguments of the given |
|
101 | search: return avilable operations, procs or arguments of the given | |
@@ -148,14 +152,12 def search(nextcommand): | |||||
148 | if nextcommand is None: |
|
152 | if nextcommand is None: | |
149 | log.error('There is no Operation/ProcessingUnit to search', '') |
|
153 | log.error('There is no Operation/ProcessingUnit to search', '') | |
150 | else: |
|
154 | else: | |
151 |
try: |
|
155 | try: | |
152 | args = getArgs(nextcommand) |
|
156 | args = getArgs(nextcommand) | |
153 | doc = getDoc(nextcommand) |
|
157 | doc = getDoc(nextcommand) | |
154 | if len(args) == 0: |
|
158 | log.success('{}\n{}\n\nparameters:\n {}'.format( | |
155 | log.success('\n{} has no arguments'.format(nextcommand), '') |
|
159 | nextcommand, doc, ', '.join(args)), '' | |
156 |
|
|
160 | ) | |
157 | log.success('{}\n{}\n\narguments:\n {}'.format( |
|
|||
158 | nextcommand, doc, ', '.join(args)), '') |
|
|||
159 | except Exception as e: |
|
161 | except Exception as e: | |
160 | log.error('Module `{}` does not exists'.format(nextcommand), '') |
|
162 | log.error('Module `{}` does not exists'.format(nextcommand), '') | |
161 | allModules = getAll() |
|
163 | allModules = getAll() |
This diff has been collapsed as it changes many lines, (929 lines changed) Show them Hide them | |||||
@@ -1,26 +1,29 | |||||
1 | ''' |
|
1 | # Copyright (c) 2012-2020 Jicamarca Radio Observatory | |
2 | Updated on January , 2018, for multiprocessing purposes |
|
2 | # All rights reserved. | |
3 | Author: Sergio Cortez |
|
3 | # | |
4 | Created on September , 2012 |
|
4 | # Distributed under the terms of the BSD 3-clause license. | |
5 | ''' |
|
5 | """API to create signal chain projects | |
6 | from platform import python_version |
|
6 | ||
|
7 | The API is provide through class: Project | |||
|
8 | """ | |||
|
9 | ||||
|
10 | import re | |||
7 | import sys |
|
11 | import sys | |
8 | import ast |
|
12 | import ast | |
9 | import datetime |
|
13 | import datetime | |
10 | import traceback |
|
14 | import traceback | |
11 | import math |
|
|||
12 | import time |
|
15 | import time | |
13 | import zmq |
|
16 | import multiprocessing | |
14 |
from multiprocessing import Process, Queue |
|
17 | from multiprocessing import Process, Queue | |
15 | from threading import Thread |
|
18 | from threading import Thread | |
16 |
from xml.etree.ElementTree import ElementTree, Element, SubElement |
|
19 | from xml.etree.ElementTree import ElementTree, Element, SubElement | |
17 | from xml.dom import minidom |
|
|||
18 |
|
||||
19 |
|
20 | |||
20 | from schainpy.admin import Alarm, SchainWarning |
|
21 | from schainpy.admin import Alarm, SchainWarning | |
21 | from schainpy.model import * |
|
22 | from schainpy.model import * | |
22 | from schainpy.utils import log |
|
23 | from schainpy.utils import log | |
23 |
|
24 | |||
|
25 | if 'darwin' in sys.platform and sys.version_info[0] == 3 and sys.version_info[1] > 7: | |||
|
26 | multiprocessing.set_start_method('fork') | |||
24 |
|
27 | |||
25 | DTYPES = { |
|
28 | DTYPES = { | |
26 | 'Voltage': '.r', |
|
29 | 'Voltage': '.r', | |
@@ -287,282 +290,157 class OperationConf(): | |||||
287 | self.id = '0' |
|
290 | self.id = '0' | |
288 | self.name = None |
|
291 | self.name = None | |
289 | self.priority = None |
|
292 | self.priority = None | |
290 |
self. |
|
293 | self.parameters = {} | |
291 |
|
294 | self.object = None | ||
292 | def __getNewId(self): |
|
295 | self.operations = [] | |
293 |
|
||||
294 | return int(self.id) * 10 + len(self.parmConfObjList) + 1 |
|
|||
295 |
|
296 | |||
296 | def getId(self): |
|
297 | def getId(self): | |
|
298 | ||||
297 | return self.id |
|
299 | return self.id | |
298 |
|
300 | |||
|
301 | def getNewId(self): | |||
|
302 | ||||
|
303 | return int(self.id) * 10 + len(self.operations) + 1 | |||
|
304 | ||||
299 | def updateId(self, new_id): |
|
305 | def updateId(self, new_id): | |
300 |
|
306 | |||
301 | self.id = str(new_id) |
|
307 | self.id = str(new_id) | |
302 |
|
308 | |||
303 | n = 1 |
|
309 | n = 1 | |
304 |
for |
|
310 | for conf in self.operations: | |
305 |
|
311 | conf_id = str(int(new_id) * 10 + n) | ||
306 | idParm = str(int(new_id) * 10 + n) |
|
312 | conf.updateId(conf_id) | |
307 | parmObj.updateId(idParm) |
|
|||
308 |
|
||||
309 | n += 1 |
|
313 | n += 1 | |
310 |
|
314 | |||
311 |
def get |
|
315 | def getKwargs(self): | |
312 |
|
||||
313 | return self.ELEMENTNAME |
|
|||
314 |
|
||||
315 | def getParameterObjList(self): |
|
|||
316 |
|
||||
317 | return self.parmConfObjList |
|
|||
318 |
|
||||
319 | def getParameterObj(self, parameterName): |
|
|||
320 |
|
316 | |||
321 | for parmConfObj in self.parmConfObjList: |
|
317 | params = {} | |
322 |
|
318 | |||
323 | if parmConfObj.name != parameterName: |
|
319 | for key, value in self.parameters.items(): | |
324 | continue |
|
320 | if value not in (None, '', ' '): | |
|
321 | params[key] = value | |||
325 |
|
322 | |||
326 |
|
|
323 | return params | |
327 |
|
324 | |||
328 | return None |
|
325 | def update(self, **kwargs): | |
329 |
|
326 | |||
330 | def getParameterObjfromValue(self, parameterValue): |
|
327 | for key, value in kwargs.items(): | |
|
328 | self.addParameter(name=key, value=value) | |||
331 |
|
329 | |||
332 | for parmConfObj in self.parmConfObjList: |
|
330 | def addParameter(self, name, value, format=None): | |
|
331 | ''' | |||
|
332 | ''' | |||
333 |
|
333 | |||
334 | if parmConfObj.getValue() != parameterValue: |
|
334 | if isinstance(value, str) and re.search(r'(\d+/\d+/\d+)', value): | |
335 | continue |
|
335 | self.parameters[name] = datetime.date(*[int(x) for x in value.split('/')]) | |
|
336 | elif isinstance(value, str) and re.search(r'(\d+:\d+:\d+)', value): | |||
|
337 | self.parameters[name] = datetime.time(*[int(x) for x in value.split(':')]) | |||
|
338 | else: | |||
|
339 | try: | |||
|
340 | self.parameters[name] = ast.literal_eval(value) | |||
|
341 | except: | |||
|
342 | if isinstance(value, str) and ',' in value: | |||
|
343 | self.parameters[name] = value.split(',') | |||
|
344 | else: | |||
|
345 | self.parameters[name] = value | |||
|
346 | ||||
|
347 | def getParameters(self): | |||
|
348 | ||||
|
349 | params = {} | |||
|
350 | for key, value in self.parameters.items(): | |||
|
351 | s = type(value).__name__ | |||
|
352 | if s == 'date': | |||
|
353 | params[key] = value.strftime('%Y/%m/%d') | |||
|
354 | elif s == 'time': | |||
|
355 | params[key] = value.strftime('%H:%M:%S') | |||
|
356 | else: | |||
|
357 | params[key] = str(value) | |||
336 |
|
358 | |||
337 |
|
|
359 | return params | |
338 |
|
360 | |||
339 | return None |
|
361 | def makeXml(self, element): | |
340 |
|
362 | |||
341 | def getParameterValue(self, parameterName): |
|
363 | xml = SubElement(element, self.ELEMENTNAME) | |
|
364 | for label in self.xml_labels: | |||
|
365 | xml.set(label, str(getattr(self, label))) | |||
342 |
|
366 | |||
343 |
|
|
367 | for key, value in self.getParameters().items(): | |
|
368 | xml_param = SubElement(xml, 'Parameter') | |||
|
369 | xml_param.set('name', key) | |||
|
370 | xml_param.set('value', value) | |||
344 |
|
371 | |||
345 | # if not parameterObj: |
|
372 | for conf in self.operations: | |
346 | # return None |
|
373 | conf.makeXml(xml) | |
347 |
|
374 | |||
348 | value = parameterObj.getValue() |
|
375 | def __str__(self): | |
349 |
|
376 | |||
350 | return value |
|
377 | if self.ELEMENTNAME == 'Operation': | |
|
378 | s = ' {}[id={}]\n'.format(self.name, self.id) | |||
|
379 | else: | |||
|
380 | s = '{}[id={}, inputId={}]\n'.format(self.name, self.id, self.inputId) | |||
351 |
|
381 | |||
352 | def getKwargs(self): |
|
382 | for key, value in self.parameters.items(): | |
|
383 | if self.ELEMENTNAME == 'Operation': | |||
|
384 | s += ' {}: {}\n'.format(key, value) | |||
|
385 | else: | |||
|
386 | s += ' {}: {}\n'.format(key, value) | |||
353 |
|
387 | |||
354 | kwargs = {} |
|
388 | for conf in self.operations: | |
|
389 | s += str(conf) | |||
355 |
|
390 | |||
356 | for parmConfObj in self.parmConfObjList: |
|
391 | return s | |
357 | if self.name == 'run' and parmConfObj.name == 'datatype': |
|
|||
358 | continue |
|
|||
359 |
|
392 | |||
360 | kwargs[parmConfObj.name] = parmConfObj.getValue() |
|
393 | class OperationConf(ConfBase): | |
361 |
|
394 | |||
362 | return kwargs |
|
395 | ELEMENTNAME = 'Operation' | |
|
396 | xml_labels = ['id', 'name'] | |||
363 |
|
397 | |||
364 |
def setup(self, id, name, priority, |
|
398 | def setup(self, id, name, priority, project_id, err_queue): | |
365 |
|
399 | |||
366 | self.id = str(id) |
|
400 | self.id = str(id) | |
367 | self.project_id = project_id |
|
401 | self.project_id = project_id | |
368 | self.name = name |
|
402 | self.name = name | |
369 |
self.type = |
|
403 | self.type = 'other' | |
370 | self.priority = priority |
|
|||
371 | self.err_queue = err_queue |
|
404 | self.err_queue = err_queue | |
372 | self.lock = lock |
|
|||
373 | self.parmConfObjList = [] |
|
|||
374 |
|
405 | |||
375 | def removeParameters(self): |
|
406 | def readXml(self, element, project_id, err_queue): | |
376 |
|
407 | |||
377 | for obj in self.parmConfObjList: |
|
408 | self.id = element.get('id') | |
378 | del obj |
|
409 | self.name = element.get('name') | |
379 |
|
410 | self.type = 'other' | ||
380 | self.parmConfObjList = [] |
|
|||
381 |
|
||||
382 | def addParameter(self, name, value, format='str'): |
|
|||
383 |
|
||||
384 | if value is None: |
|
|||
385 | return None |
|
|||
386 | id = self.__getNewId() |
|
|||
387 |
|
||||
388 | parmConfObj = ParameterConf() |
|
|||
389 | if not parmConfObj.setup(id, name, value, format): |
|
|||
390 | return None |
|
|||
391 |
|
||||
392 | self.parmConfObjList.append(parmConfObj) |
|
|||
393 |
|
||||
394 | return parmConfObj |
|
|||
395 |
|
||||
396 | def changeParameter(self, name, value, format='str'): |
|
|||
397 |
|
||||
398 | parmConfObj = self.getParameterObj(name) |
|
|||
399 | parmConfObj.update(name, value, format) |
|
|||
400 |
|
||||
401 | return parmConfObj |
|
|||
402 |
|
||||
403 | def makeXml(self, procUnitElement): |
|
|||
404 |
|
||||
405 | opElement = SubElement(procUnitElement, self.ELEMENTNAME) |
|
|||
406 | opElement.set('id', str(self.id)) |
|
|||
407 | opElement.set('name', self.name) |
|
|||
408 | opElement.set('type', self.type) |
|
|||
409 | opElement.set('priority', str(self.priority)) |
|
|||
410 |
|
||||
411 | for parmConfObj in self.parmConfObjList: |
|
|||
412 | parmConfObj.makeXml(opElement) |
|
|||
413 |
|
||||
414 | def readXml(self, opElement, project_id): |
|
|||
415 |
|
||||
416 | self.id = opElement.get('id') |
|
|||
417 | self.name = opElement.get('name') |
|
|||
418 | self.type = opElement.get('type') |
|
|||
419 | self.priority = opElement.get('priority') |
|
|||
420 | self.project_id = str(project_id) |
|
411 | self.project_id = str(project_id) | |
|
412 | self.err_queue = err_queue | |||
421 |
|
413 | |||
422 | # Compatible with old signal chain version |
|
414 | for elm in element.iter('Parameter'): | |
423 | # Use of 'run' method instead 'init' |
|
415 | self.addParameter(elm.get('name'), elm.get('value')) | |
424 | if self.type == 'self' and self.name == 'init': |
|
|||
425 | self.name = 'run' |
|
|||
426 |
|
||||
427 | self.parmConfObjList = [] |
|
|||
428 |
|
||||
429 | parmElementList = opElement.iter(ParameterConf().getElementName()) |
|
|||
430 |
|
||||
431 | for parmElement in parmElementList: |
|
|||
432 | parmConfObj = ParameterConf() |
|
|||
433 | parmConfObj.readXml(parmElement) |
|
|||
434 |
|
||||
435 | # Compatible with old signal chain version |
|
|||
436 | # If an 'plot' OPERATION is found, changes name operation by the value of its type PARAMETER |
|
|||
437 | if self.type != 'self' and self.name == 'Plot': |
|
|||
438 | if parmConfObj.format == 'str' and parmConfObj.name == 'type': |
|
|||
439 | self.name = parmConfObj.value |
|
|||
440 | continue |
|
|||
441 |
|
||||
442 | self.parmConfObjList.append(parmConfObj) |
|
|||
443 |
|
||||
444 | def printattr(self): |
|
|||
445 |
|
||||
446 | print('%s[%s]: name = %s, type = %s, priority = %s, project_id = %s' % (self.ELEMENTNAME, |
|
|||
447 | self.id, |
|
|||
448 | self.name, |
|
|||
449 | self.type, |
|
|||
450 | self.priority, |
|
|||
451 | self.project_id)) |
|
|||
452 |
|
||||
453 | for parmConfObj in self.parmConfObjList: |
|
|||
454 | parmConfObj.printattr() |
|
|||
455 |
|
416 | |||
456 | def createObject(self): |
|
417 | def createObject(self): | |
457 |
|
418 | |||
458 | className = eval(self.name) |
|
419 | className = eval(self.name) | |
459 |
|
420 | |||
460 | if self.type == 'other': |
|
421 | if 'Plot' in self.name or 'Writer' in self.name or 'Send' in self.name or 'print' in self.name: | |
461 | opObj = className() |
|
|||
462 | elif self.type == 'external': |
|
|||
463 | kwargs = self.getKwargs() |
|
422 | kwargs = self.getKwargs() | |
464 |
opObj = className(self.id, self.id, self.project_id, self.err_queue, |
|
423 | opObj = className(self.id, self.id, self.project_id, self.err_queue, **kwargs) | |
465 | opObj.start() |
|
424 | opObj.start() | |
466 |
self. |
|
425 | self.type = 'external' | |
|
426 | else: | |||
|
427 | opObj = className() | |||
467 |
|
428 | |||
|
429 | self.object = opObj | |||
468 | return opObj |
|
430 | return opObj | |
469 |
|
431 | |||
470 | class ProcUnitConf(): |
|
432 | class ProcUnitConf(ConfBase): | |
471 |
|
433 | |||
472 | ELEMENTNAME = 'ProcUnit' |
|
434 | ELEMENTNAME = 'ProcUnit' | |
|
435 | xml_labels = ['id', 'inputId', 'name'] | |||
473 |
|
436 | |||
474 | def __init__(self): |
|
437 | def setup(self, project_id, id, name, datatype, inputId, err_queue): | |
475 |
|
||||
476 | self.id = None |
|
|||
477 | self.datatype = None |
|
|||
478 | self.name = None |
|
|||
479 | self.inputId = None |
|
|||
480 | self.opConfObjList = [] |
|
|||
481 | self.procUnitObj = None |
|
|||
482 | self.opObjDict = {} |
|
|||
483 |
|
||||
484 | def __getPriority(self): |
|
|||
485 |
|
||||
486 | return len(self.opConfObjList) + 1 |
|
|||
487 |
|
||||
488 | def __getNewId(self): |
|
|||
489 |
|
||||
490 | return int(self.id) * 10 + len(self.opConfObjList) + 1 |
|
|||
491 |
|
||||
492 | def getElementName(self): |
|
|||
493 |
|
||||
494 | return self.ELEMENTNAME |
|
|||
495 |
|
||||
496 | def getId(self): |
|
|||
497 |
|
||||
498 | return self.id |
|
|||
499 |
|
||||
500 | def updateId(self, new_id): |
|
|||
501 | ''' |
|
|||
502 | new_id = int(parentId) * 10 + (int(self.id) % 10) |
|
|||
503 | new_inputId = int(parentId) * 10 + (int(self.inputId) % 10) |
|
|||
504 |
|
||||
505 | # If this proc unit has not inputs |
|
|||
506 | #if self.inputId == '0': |
|
|||
507 | #new_inputId = 0 |
|
|||
508 |
|
||||
509 | n = 1 |
|
|||
510 | for opConfObj in self.opConfObjList: |
|
|||
511 |
|
||||
512 | idOp = str(int(new_id) * 10 + n) |
|
|||
513 | opConfObj.updateId(idOp) |
|
|||
514 |
|
||||
515 | n += 1 |
|
|||
516 |
|
||||
517 | self.parentId = str(parentId) |
|
|||
518 | self.id = str(new_id) |
|
|||
519 | #self.inputId = str(new_inputId) |
|
|||
520 | ''' |
|
|||
521 | n = 1 |
|
|||
522 |
|
||||
523 | def getInputId(self): |
|
|||
524 |
|
||||
525 | return self.inputId |
|
|||
526 |
|
||||
527 | def getOperationObjList(self): |
|
|||
528 |
|
||||
529 | return self.opConfObjList |
|
|||
530 |
|
||||
531 | def getOperationObj(self, name=None): |
|
|||
532 |
|
||||
533 | for opConfObj in self.opConfObjList: |
|
|||
534 |
|
||||
535 | if opConfObj.name != name: |
|
|||
536 | continue |
|
|||
537 |
|
||||
538 | return opConfObj |
|
|||
539 |
|
||||
540 | return None |
|
|||
541 |
|
||||
542 | def getOpObjfromParamValue(self, value=None): |
|
|||
543 |
|
||||
544 | for opConfObj in self.opConfObjList: |
|
|||
545 | if opConfObj.getParameterObjfromValue(parameterValue=value) != value: |
|
|||
546 | continue |
|
|||
547 | return opConfObj |
|
|||
548 | return None |
|
|||
549 |
|
||||
550 | def getProcUnitObj(self): |
|
|||
551 |
|
||||
552 | return self.procUnitObj |
|
|||
553 |
|
||||
554 | def setup(self, project_id, id, name, datatype, inputId, err_queue, lock): |
|
|||
555 | ''' |
|
438 | ''' | |
556 | id sera el topico a publicar |
|
|||
557 | inputId sera el topico a subscribirse |
|
|||
558 | ''' |
|
439 | ''' | |
559 |
|
440 | |||
560 | # Compatible with old signal chain version |
|
|||
561 | if datatype == None and name == None: |
|
441 | if datatype == None and name == None: | |
562 | raise ValueError('datatype or name should be defined') |
|
442 | raise ValueError('datatype or name should be defined') | |
563 |
|
443 | |||
564 | #Definir una condicion para inputId cuando sea 0 |
|
|||
565 |
|
||||
566 | if name == None: |
|
444 | if name == None: | |
567 | if 'Proc' in datatype: |
|
445 | if 'Proc' in datatype: | |
568 | name = datatype |
|
446 | name = datatype | |
@@ -578,100 +456,49 class ProcUnitConf(): | |||||
578 | self.datatype = datatype |
|
456 | self.datatype = datatype | |
579 | self.inputId = inputId |
|
457 | self.inputId = inputId | |
580 | self.err_queue = err_queue |
|
458 | self.err_queue = err_queue | |
581 |
self. |
|
459 | self.operations = [] | |
582 |
self. |
|
460 | self.parameters = {} | |
583 |
|
||||
584 | self.addOperation(name='run', optype='self') |
|
|||
585 |
|
||||
586 | def removeOperations(self): |
|
|||
587 |
|
461 | |||
588 | for obj in self.opConfObjList: |
|
462 | def removeOperation(self, id): | |
589 | del obj |
|
|||
590 |
|
463 | |||
591 | self.opConfObjList = [] |
|
464 | i = [1 if x.id==id else 0 for x in self.operations] | |
592 |
self. |
|
465 | self.operations.pop(i.index(1)) | |
593 |
|
466 | |||
594 | def addParameter(self, **kwargs): |
|
467 | def getOperation(self, id): | |
595 | ''' |
|
|||
596 | Add parameters to 'run' operation |
|
|||
597 | ''' |
|
|||
598 | opObj = self.opConfObjList[0] |
|
|||
599 |
|
468 | |||
600 | opObj.addParameter(**kwargs) |
|
469 | for conf in self.operations: | |
601 |
|
470 | if conf.id == id: | ||
602 |
return |
|
471 | return conf | |
603 |
|
472 | |||
604 | def addOperation(self, name, optype='self'): |
|
473 | def addOperation(self, name, optype='self'): | |
605 | ''' |
|
474 | ''' | |
606 | Actualizacion - > proceso comunicacion |
|
|||
607 | En el caso de optype='self', elminar. DEfinir comuncacion IPC -> Topic |
|
|||
608 | definir el tipoc de socket o comunicacion ipc++ |
|
|||
609 |
|
||||
610 | ''' |
|
475 | ''' | |
611 |
|
476 | |||
612 |
id = self. |
|
477 | id = self.getNewId() | |
613 | priority = self.__getPriority() # Sin mucho sentido, pero puede usarse |
|
478 | conf = OperationConf() | |
614 | opConfObj = OperationConf() |
|
479 | conf.setup(id, name=name, priority='0', project_id=self.project_id, err_queue=self.err_queue) | |
615 | opConfObj.setup(id, name=name, priority=priority, type=optype, project_id=self.project_id, err_queue=self.err_queue, lock=self.lock) |
|
480 | self.operations.append(conf) | |
616 | self.opConfObjList.append(opConfObj) |
|
|||
617 |
|
||||
618 | return opConfObj |
|
|||
619 |
|
||||
620 | def makeXml(self, projectElement): |
|
|||
621 |
|
||||
622 | procUnitElement = SubElement(projectElement, self.ELEMENTNAME) |
|
|||
623 | procUnitElement.set('id', str(self.id)) |
|
|||
624 | procUnitElement.set('name', self.name) |
|
|||
625 | procUnitElement.set('datatype', self.datatype) |
|
|||
626 | procUnitElement.set('inputId', str(self.inputId)) |
|
|||
627 |
|
481 | |||
628 | for opConfObj in self.opConfObjList: |
|
482 | return conf | |
629 | opConfObj.makeXml(procUnitElement) |
|
|||
630 |
|
483 | |||
631 |
def readXml(self, |
|
484 | def readXml(self, element, project_id, err_queue): | |
632 |
|
485 | |||
633 |
self.id = |
|
486 | self.id = element.get('id') | |
634 |
self.name = |
|
487 | self.name = element.get('name') | |
635 | self.datatype = upElement.get('datatype') |
|
488 | self.inputId = None if element.get('inputId') == 'None' else element.get('inputId') | |
636 | self.inputId = upElement.get('inputId') |
|
489 | self.datatype = element.get('datatype', self.name.replace(self.ELEMENTNAME.replace('Unit', ''), '')) | |
637 | self.project_id = str(project_id) |
|
490 | self.project_id = str(project_id) | |
|
491 | self.err_queue = err_queue | |||
|
492 | self.operations = [] | |||
|
493 | self.parameters = {} | |||
638 |
|
494 | |||
639 | if self.ELEMENTNAME == 'ReadUnit': |
|
495 | for elm in element: | |
640 | self.datatype = self.datatype.replace('Reader', '') |
|
496 | if elm.tag == 'Parameter': | |
641 |
|
497 | self.addParameter(elm.get('name'), elm.get('value')) | ||
642 | if self.ELEMENTNAME == 'ProcUnit': |
|
498 | elif elm.tag == 'Operation': | |
643 | self.datatype = self.datatype.replace('Proc', '') |
|
499 | conf = OperationConf() | |
644 |
|
500 | conf.readXml(elm, project_id, err_queue) | ||
645 | if self.inputId == 'None': |
|
501 | self.operations.append(conf) | |
646 | self.inputId = '0' |
|
|||
647 |
|
||||
648 | self.opConfObjList = [] |
|
|||
649 |
|
||||
650 | opElementList = upElement.iter(OperationConf().getElementName()) |
|
|||
651 |
|
||||
652 | for opElement in opElementList: |
|
|||
653 | opConfObj = OperationConf() |
|
|||
654 | opConfObj.readXml(opElement, project_id) |
|
|||
655 | self.opConfObjList.append(opConfObj) |
|
|||
656 |
|
||||
657 | def printattr(self): |
|
|||
658 |
|
||||
659 | print('%s[%s]: name = %s, datatype = %s, inputId = %s, project_id = %s' % (self.ELEMENTNAME, |
|
|||
660 | self.id, |
|
|||
661 | self.name, |
|
|||
662 | self.datatype, |
|
|||
663 | self.inputId, |
|
|||
664 | self.project_id)) |
|
|||
665 |
|
||||
666 | for opConfObj in self.opConfObjList: |
|
|||
667 | opConfObj.printattr() |
|
|||
668 |
|
||||
669 | def getKwargs(self): |
|
|||
670 |
|
||||
671 | opObj = self.opConfObjList[0] |
|
|||
672 | kwargs = opObj.getKwargs() |
|
|||
673 |
|
||||
674 | return kwargs |
|
|||
675 |
|
502 | |||
676 | def createObjects(self): |
|
503 | def createObjects(self): | |
677 | ''' |
|
504 | ''' | |
@@ -681,42 +508,27 class ProcUnitConf(): | |||||
681 | className = eval(self.name) |
|
508 | className = eval(self.name) | |
682 | #print(self.name) |
|
509 | #print(self.name) | |
683 | kwargs = self.getKwargs() |
|
510 | kwargs = self.getKwargs() | |
684 | #print(kwargs) |
|
511 | procUnitObj = className() | |
685 | #print("mark_a") |
|
512 | procUnitObj.name = self.name | |
686 | procUnitObj = className(self.id, self.inputId, self.project_id, self.err_queue, self.lock, 'ProcUnit', **kwargs) |
|
|||
687 | #print("mark_b") |
|
|||
688 | log.success('creating process...', self.name) |
|
513 | log.success('creating process...', self.name) | |
689 |
|
514 | |||
690 |
for |
|
515 | for conf in self.operations: | |
691 |
|
516 | |||
692 | if opConfObj.type == 'self' and opConfObj.name == 'run': |
|
517 | opObj = conf.createObject() | |
693 | continue |
|
|||
694 | elif opConfObj.type == 'self': |
|
|||
695 | opObj = getattr(procUnitObj, opConfObj.name) |
|
|||
696 | else: |
|
|||
697 | opObj = opConfObj.createObject() |
|
|||
698 |
|
518 | |||
699 | log.success('adding operation: {}, type:{}'.format( |
|
519 | log.success('adding operation: {}, type:{}'.format( | |
700 |
|
|
520 | conf.name, | |
701 |
|
|
521 | conf.type), self.name) | |
702 |
|
||||
703 | procUnitObj.addOperation(opConfObj, opObj) |
|
|||
704 |
|
522 | |||
705 |
procUnitObj. |
|
523 | procUnitObj.addOperation(conf, opObj) | |
706 | self.procUnitObj = procUnitObj |
|
|||
707 |
|
524 | |||
708 | def close(self): |
|
525 | self.object = procUnitObj | |
709 |
|
||||
710 | for opConfObj in self.opConfObjList: |
|
|||
711 | if opConfObj.type == 'self': |
|
|||
712 | continue |
|
|||
713 |
|
526 | |||
714 | opObj = self.procUnitObj.getOperationObj(opConfObj.id) |
|
527 | def run(self): | |
715 | opObj.close() |
|
528 | ''' | |
716 |
|
529 | ''' | ||
717 | self.procUnitObj.close() |
|
|||
718 |
|
530 | |||
719 | return |
|
531 | return self.object.call(**self.getKwargs()) | |
720 |
|
532 | |||
721 |
|
533 | |||
722 | class ReadUnitConf(ProcUnitConf): |
|
534 | class ReadUnitConf(ProcUnitConf): | |
@@ -729,28 +541,12 class ReadUnitConf(ProcUnitConf): | |||||
729 | self.datatype = None |
|
541 | self.datatype = None | |
730 | self.name = None |
|
542 | self.name = None | |
731 | self.inputId = None |
|
543 | self.inputId = None | |
732 |
self.op |
|
544 | self.operations = [] | |
733 | self.lock = Event() |
|
545 | self.parameters = {} | |
734 | self.lock.set() |
|
|||
735 | self.lock.n = Value('d', 0) |
|
|||
736 |
|
||||
737 | def getElementName(self): |
|
|||
738 |
|
||||
739 | return self.ELEMENTNAME |
|
|||
740 |
|
546 | |||
741 | def setup(self, project_id, id, name, datatype, err_queue, path='', startDate='', endDate='', |
|
547 | def setup(self, project_id, id, name, datatype, err_queue, path='', startDate='', endDate='', | |
742 | startTime='', endTime='', server=None, **kwargs): |
|
548 | startTime='', endTime='', server=None, **kwargs): | |
743 |
|
549 | |||
744 |
|
||||
745 | ''' |
|
|||
746 | *****el id del proceso sera el Topico |
|
|||
747 |
|
||||
748 | Adicion de {topic}, si no esta presente -> error |
|
|||
749 | kwargs deben ser trasmitidos en la instanciacion |
|
|||
750 |
|
||||
751 | ''' |
|
|||
752 |
|
||||
753 | # Compatible with old signal chain version |
|
|||
754 | if datatype == None and name == None: |
|
550 | if datatype == None and name == None: | |
755 | raise ValueError('datatype or name should be defined') |
|
551 | raise ValueError('datatype or name should be defined') | |
756 | if name == None: |
|
552 | if name == None: | |
@@ -770,133 +566,41 class ReadUnitConf(ProcUnitConf): | |||||
770 | self.project_id = project_id |
|
566 | self.project_id = project_id | |
771 | self.name = name |
|
567 | self.name = name | |
772 | self.datatype = datatype |
|
568 | self.datatype = datatype | |
773 | if path != '': |
|
|||
774 | self.path = os.path.abspath(path) |
|
|||
775 | print (self.path) |
|
|||
776 | self.startDate = startDate |
|
|||
777 | self.endDate = endDate |
|
|||
778 | self.startTime = startTime |
|
|||
779 | self.endTime = endTime |
|
|||
780 | self.server = server |
|
|||
781 | self.err_queue = err_queue |
|
569 | self.err_queue = err_queue | |
782 | self.addRunOperation(**kwargs) |
|
|||
783 |
|
570 | |||
784 | def update(self, **kwargs): |
|
571 | self.addParameter(name='path', value=path) | |
785 |
|
572 | self.addParameter(name='startDate', value=startDate) | ||
786 | if 'datatype' in kwargs: |
|
573 | self.addParameter(name='endDate', value=endDate) | |
787 | datatype = kwargs.pop('datatype') |
|
574 | self.addParameter(name='startTime', value=startTime) | |
788 | if 'Reader' in datatype: |
|
575 | self.addParameter(name='endTime', value=endTime) | |
789 | self.name = datatype |
|
|||
790 | else: |
|
|||
791 | self.name = '%sReader' % (datatype) |
|
|||
792 | self.datatype = self.name.replace('Reader', '') |
|
|||
793 |
|
||||
794 | attrs = ('path', 'startDate', 'endDate', |
|
|||
795 | 'startTime', 'endTime') |
|
|||
796 |
|
||||
797 | for attr in attrs: |
|
|||
798 | if attr in kwargs: |
|
|||
799 | setattr(self, attr, kwargs.pop(attr)) |
|
|||
800 |
|
||||
801 | self.updateRunOperation(**kwargs) |
|
|||
802 |
|
||||
803 | def removeOperations(self): |
|
|||
804 |
|
576 | |||
805 | for obj in self.opConfObjList: |
|
577 | for key, value in kwargs.items(): | |
806 | del obj |
|
578 | self.addParameter(name=key, value=value) | |
807 |
|
||||
808 | self.opConfObjList = [] |
|
|||
809 |
|
||||
810 | def addRunOperation(self, **kwargs): |
|
|||
811 |
|
||||
812 | opObj = self.addOperation(name='run', optype='self') |
|
|||
813 |
|
||||
814 | if self.server is None: |
|
|||
815 | opObj.addParameter( |
|
|||
816 | name='datatype', value=self.datatype, format='str') |
|
|||
817 | opObj.addParameter(name='path', value=self.path, format='str') |
|
|||
818 | opObj.addParameter( |
|
|||
819 | name='startDate', value=self.startDate, format='date') |
|
|||
820 | opObj.addParameter( |
|
|||
821 | name='endDate', value=self.endDate, format='date') |
|
|||
822 | opObj.addParameter( |
|
|||
823 | name='startTime', value=self.startTime, format='time') |
|
|||
824 | opObj.addParameter( |
|
|||
825 | name='endTime', value=self.endTime, format='time') |
|
|||
826 |
|
||||
827 | for key, value in list(kwargs.items()): |
|
|||
828 | opObj.addParameter(name=key, value=value, |
|
|||
829 | format=type(value).__name__) |
|
|||
830 | else: |
|
|||
831 | opObj.addParameter(name='server', value=self.server, format='str') |
|
|||
832 |
|
||||
833 | return opObj |
|
|||
834 |
|
||||
835 | def updateRunOperation(self, **kwargs): |
|
|||
836 |
|
||||
837 | opObj = self.getOperationObj(name='run') |
|
|||
838 | opObj.removeParameters() |
|
|||
839 |
|
||||
840 | opObj.addParameter(name='datatype', value=self.datatype, format='str') |
|
|||
841 | opObj.addParameter(name='path', value=self.path, format='str') |
|
|||
842 | opObj.addParameter( |
|
|||
843 | name='startDate', value=self.startDate, format='date') |
|
|||
844 | opObj.addParameter(name='endDate', value=self.endDate, format='date') |
|
|||
845 | opObj.addParameter( |
|
|||
846 | name='startTime', value=self.startTime, format='time') |
|
|||
847 | opObj.addParameter(name='endTime', value=self.endTime, format='time') |
|
|||
848 |
|
||||
849 | for key, value in list(kwargs.items()): |
|
|||
850 | opObj.addParameter(name=key, value=value, |
|
|||
851 | format=type(value).__name__) |
|
|||
852 |
|
||||
853 | return opObj |
|
|||
854 |
|
||||
855 | def readXml(self, upElement, project_id): |
|
|||
856 |
|
||||
857 | self.id = upElement.get('id') |
|
|||
858 | self.name = upElement.get('name') |
|
|||
859 | self.datatype = upElement.get('datatype') |
|
|||
860 | self.project_id = str(project_id) #yong |
|
|||
861 |
|
||||
862 | if self.ELEMENTNAME == 'ReadUnit': |
|
|||
863 | self.datatype = self.datatype.replace('Reader', '') |
|
|||
864 |
|
||||
865 | self.opConfObjList = [] |
|
|||
866 |
|
||||
867 | opElementList = upElement.iter(OperationConf().getElementName()) |
|
|||
868 |
|
||||
869 | for opElement in opElementList: |
|
|||
870 | opConfObj = OperationConf() |
|
|||
871 | opConfObj.readXml(opElement, project_id) |
|
|||
872 | self.opConfObjList.append(opConfObj) |
|
|||
873 |
|
||||
874 | if opConfObj.name == 'run': |
|
|||
875 | self.path = opConfObj.getParameterValue('path') |
|
|||
876 | self.startDate = opConfObj.getParameterValue('startDate') |
|
|||
877 | self.endDate = opConfObj.getParameterValue('endDate') |
|
|||
878 | self.startTime = opConfObj.getParameterValue('startTime') |
|
|||
879 | self.endTime = opConfObj.getParameterValue('endTime') |
|
|||
880 |
|
579 | |||
881 |
|
580 | |||
882 | class Project(Process): |
|
581 | class Project(Process): | |
|
582 | """API to create signal chain projects""" | |||
883 |
|
583 | |||
884 | ELEMENTNAME = 'Project' |
|
584 | ELEMENTNAME = 'Project' | |
885 |
|
585 | |||
886 | def __init__(self): |
|
586 | def __init__(self, name=''): | |
887 |
|
587 | |||
888 | Process.__init__(self) |
|
588 | Process.__init__(self) | |
889 |
self.id = |
|
589 | self.id = '1' | |
|
590 | if name: | |||
|
591 | self.name = '{} ({})'.format(Process.__name__, name) | |||
890 | self.filename = None |
|
592 | self.filename = None | |
891 | self.description = None |
|
593 | self.description = None | |
892 | self.email = None |
|
594 | self.email = None | |
893 |
self.alarm = |
|
595 | self.alarm = [] | |
894 |
self. |
|
596 | self.configurations = {} | |
895 | self.err_queue = Queue() |
|
597 | # self.err_queue = Queue() | |
|
598 | self.err_queue = None | |||
|
599 | self.started = False | |||
896 |
|
600 | |||
897 |
def |
|
601 | def getNewId(self): | |
898 |
|
602 | |||
899 |
idList = list(self. |
|
603 | idList = list(self.configurations.keys()) | |
900 | id = int(self.id) * 10 |
|
604 | id = int(self.id) * 10 | |
901 |
|
605 | |||
902 | while True: |
|
606 | while True: | |
@@ -909,43 +613,28 class Project(Process): | |||||
909 |
|
613 | |||
910 | return str(id) |
|
614 | return str(id) | |
911 |
|
615 | |||
912 | def getElementName(self): |
|
|||
913 |
|
||||
914 | return self.ELEMENTNAME |
|
|||
915 |
|
||||
916 | def getId(self): |
|
|||
917 |
|
||||
918 | return self.id |
|
|||
919 |
|
||||
920 | def updateId(self, new_id): |
|
616 | def updateId(self, new_id): | |
921 |
|
617 | |||
922 | self.id = str(new_id) |
|
618 | self.id = str(new_id) | |
923 |
|
619 | |||
924 |
keyList = list(self. |
|
620 | keyList = list(self.configurations.keys()) | |
925 | keyList.sort() |
|
621 | keyList.sort() | |
926 |
|
622 | |||
927 | n = 1 |
|
623 | n = 1 | |
928 |
new |
|
624 | new_confs = {} | |
929 |
|
625 | |||
930 | for procKey in keyList: |
|
626 | for procKey in keyList: | |
931 |
|
627 | |||
932 |
|
|
628 | conf = self.configurations[procKey] | |
933 | idProcUnit = str(int(self.id) * 10 + n) |
|
629 | idProcUnit = str(int(self.id) * 10 + n) | |
934 |
|
|
630 | conf.updateId(idProcUnit) | |
935 |
new |
|
631 | new_confs[idProcUnit] = conf | |
936 | n += 1 |
|
632 | n += 1 | |
937 |
|
633 | |||
938 |
self. |
|
634 | self.configurations = new_confs | |
939 |
|
635 | |||
940 | def setup(self, id=1, name='', description='', email=None, alarm=[]): |
|
636 | def setup(self, id=1, name='', description='', email=None, alarm=[]): | |
941 |
|
637 | |||
942 | print(' ') |
|
|||
943 | print('*' * 60) |
|
|||
944 | print('* Starting SIGNAL CHAIN PROCESSING (Multiprocessing) v%s *' % schainpy.__version__) |
|
|||
945 | print('*' * 60) |
|
|||
946 | print("* Python " + python_version() + " *") |
|
|||
947 | print('*' * 19) |
|
|||
948 | print(' ') |
|
|||
949 | self.id = str(id) |
|
638 | self.id = str(id) | |
950 | self.description = description |
|
639 | self.description = description | |
951 | self.email = email |
|
640 | self.email = email | |
@@ -955,108 +644,91 class Project(Process): | |||||
955 |
|
644 | |||
956 | def update(self, **kwargs): |
|
645 | def update(self, **kwargs): | |
957 |
|
646 | |||
958 |
for key, value in |
|
647 | for key, value in kwargs.items(): | |
959 | setattr(self, key, value) |
|
648 | setattr(self, key, value) | |
960 |
|
649 | |||
961 | def clone(self): |
|
650 | def clone(self): | |
962 |
|
651 | |||
963 | p = Project() |
|
652 | p = Project() | |
964 | p.procUnitConfObjDict = self.procUnitConfObjDict |
|
653 | p.id = self.id | |
|
654 | p.name = self.name | |||
|
655 | p.description = self.description | |||
|
656 | p.configurations = self.configurations.copy() | |||
|
657 | ||||
965 | return p |
|
658 | return p | |
966 |
|
659 | |||
967 | def addReadUnit(self, id=None, datatype=None, name=None, **kwargs): |
|
660 | def addReadUnit(self, id=None, datatype=None, name=None, **kwargs): | |
968 |
|
661 | |||
969 | ''' |
|
662 | ''' | |
970 | Actualizacion: |
|
|||
971 | Se agrego un nuevo argumento: topic -relativo a la forma de comunicar los procesos simultaneos |
|
|||
972 |
|
||||
973 | * El id del proceso sera el topico al que se deben subscribir los procUnits para recibir la informacion(data) |
|
|||
974 |
|
||||
975 | ''' |
|
663 | ''' | |
976 |
|
664 | |||
977 | if id is None: |
|
665 | if id is None: | |
978 |
idReadUnit = self. |
|
666 | idReadUnit = self.getNewId() | |
979 | else: |
|
667 | else: | |
980 | idReadUnit = str(id) |
|
668 | idReadUnit = str(id) | |
981 |
|
669 | |||
982 |
|
|
670 | conf = ReadUnitConf() | |
983 |
|
|
671 | conf.setup(self.id, idReadUnit, name, datatype, self.err_queue, **kwargs) | |
984 | self.procUnitConfObjDict[readUnitConfObj.getId()] = readUnitConfObj |
|
672 | self.configurations[conf.id] = conf | |
985 |
|
673 | |||
986 |
return |
|
674 | return conf | |
987 |
|
675 | |||
988 | def addProcUnit(self, inputId='0', datatype=None, name=None): |
|
676 | def addProcUnit(self, id=None, inputId='0', datatype=None, name=None): | |
989 |
|
677 | |||
990 | ''' |
|
678 | ''' | |
991 | Actualizacion: |
|
|||
992 | Se agrego dos nuevos argumentos: topic_read (lee data de otro procUnit) y topic_write(escribe o envia data a otro procUnit) |
|
|||
993 | Deberia reemplazar a "inputId" |
|
|||
994 |
|
||||
995 | ** A fin de mantener el inputID, este sera la representaacion del topicoal que deben subscribirse. El ID propio de la intancia |
|
|||
996 | (proceso) sera el topico de la publicacion, todo sera asignado de manera dinamica. |
|
|||
997 |
|
||||
998 | ''' |
|
679 | ''' | |
999 |
|
680 | |||
1000 | idProcUnit = self.__getNewId() |
|
681 | if id is None: | |
1001 | procUnitConfObj = ProcUnitConf() |
|
682 | idProcUnit = self.getNewId() | |
1002 | input_proc = self.procUnitConfObjDict[inputId] |
|
683 | else: | |
1003 | procUnitConfObj.setup(self.id, idProcUnit, name, datatype, inputId, self.err_queue, input_proc.lock) |
|
684 | idProcUnit = id | |
1004 | self.procUnitConfObjDict[procUnitConfObj.getId()] = procUnitConfObj |
|
|||
1005 |
|
||||
1006 | return procUnitConfObj |
|
|||
1007 |
|
||||
1008 | def removeProcUnit(self, id): |
|
|||
1009 |
|
685 | |||
1010 | if id in list(self.procUnitConfObjDict.keys()): |
|
686 | conf = ProcUnitConf() | |
1011 | self.procUnitConfObjDict.pop(id) |
|
687 | conf.setup(self.id, idProcUnit, name, datatype, inputId, self.err_queue) | |
|
688 | self.configurations[conf.id] = conf | |||
1012 |
|
689 | |||
1013 | def getReadUnitId(self): |
|
690 | return conf | |
1014 |
|
691 | |||
1015 | readUnitConfObj = self.getReadUnitObj() |
|
692 | def removeProcUnit(self, id): | |
1016 |
|
693 | |||
1017 | return readUnitConfObj.id |
|
694 | if id in self.configurations: | |
|
695 | self.configurations.pop(id) | |||
1018 |
|
696 | |||
1019 |
def getReadUnit |
|
697 | def getReadUnit(self): | |
1020 |
|
698 | |||
1021 |
for obj in list(self. |
|
699 | for obj in list(self.configurations.values()): | |
1022 |
if obj. |
|
700 | if obj.ELEMENTNAME == 'ReadUnit': | |
1023 | return obj |
|
701 | return obj | |
1024 |
|
702 | |||
1025 | return None |
|
703 | return None | |
1026 |
|
704 | |||
1027 |
def getProcUnit |
|
705 | def getProcUnit(self, id): | |
1028 |
|
||||
1029 | if id != None: |
|
|||
1030 | return self.procUnitConfObjDict[id] |
|
|||
1031 |
|
706 | |||
1032 | if name != None: |
|
707 | return self.configurations[id] | |
1033 | return self.getProcUnitObjByName(name) |
|
|||
1034 |
|
||||
1035 | return None |
|
|||
1036 |
|
708 | |||
1037 |
def get |
|
709 | def getUnits(self): | |
1038 |
|
710 | |||
1039 | for obj in list(self.procUnitConfObjDict.values()): |
|
711 | keys = list(self.configurations) | |
1040 | if obj.name == name: |
|
712 | keys.sort() | |
1041 | return obj |
|
|||
1042 |
|
713 | |||
1043 |
r |
|
714 | for key in keys: | |
|
715 | yield self.configurations[key] | |||
1044 |
|
716 | |||
1045 | def procUnitItems(self): |
|
717 | def updateUnit(self, id, **kwargs): | |
1046 |
|
718 | |||
1047 | return list(self.procUnitConfObjDict.items()) |
|
719 | conf = self.configurations[id].update(**kwargs) | |
1048 |
|
720 | |||
1049 | def makeXml(self): |
|
721 | def makeXml(self): | |
1050 |
|
722 | |||
1051 |
|
|
723 | xml = Element('Project') | |
1052 |
|
|
724 | xml.set('id', str(self.id)) | |
1053 |
|
|
725 | xml.set('name', self.name) | |
1054 |
|
|
726 | xml.set('description', self.description) | |
1055 |
|
727 | |||
1056 |
for |
|
728 | for conf in self.configurations.values(): | |
1057 |
|
|
729 | conf.makeXml(xml) | |
1058 |
|
730 | |||
1059 | self.projectElement = projectElement |
|
731 | self.xml = xml | |
1060 |
|
732 | |||
1061 | def writeXml(self, filename=None): |
|
733 | def writeXml(self, filename=None): | |
1062 |
|
734 | |||
@@ -1082,54 +754,38 class Project(Process): | |||||
1082 |
|
754 | |||
1083 | self.makeXml() |
|
755 | self.makeXml() | |
1084 |
|
756 | |||
1085 |
ElementTree(self. |
|
757 | ElementTree(self.xml).write(abs_file, method='xml') | |
1086 |
|
758 | |||
1087 | self.filename = abs_file |
|
759 | self.filename = abs_file | |
1088 |
|
760 | |||
1089 | return 1 |
|
761 | return 1 | |
1090 |
|
762 | |||
1091 |
def readXml(self, filename |
|
763 | def readXml(self, filename): | |
1092 |
|
||||
1093 | if not filename: |
|
|||
1094 | print('filename is not defined') |
|
|||
1095 | return 0 |
|
|||
1096 |
|
764 | |||
1097 | abs_file = os.path.abspath(filename) |
|
765 | abs_file = os.path.abspath(filename) | |
1098 |
|
766 | |||
1099 | if not os.path.isfile(abs_file): |
|
767 | self.configurations = {} | |
1100 | print('%s file does not exist' % abs_file) |
|
|||
1101 | return 0 |
|
|||
1102 |
|
||||
1103 | self.projectElement = None |
|
|||
1104 | self.procUnitConfObjDict = {} |
|
|||
1105 |
|
768 | |||
1106 | try: |
|
769 | try: | |
1107 |
self. |
|
770 | self.xml = ElementTree().parse(abs_file) | |
1108 | except: |
|
771 | except: | |
1109 |
|
|
772 | log.error('Error reading %s, verify file format' % filename) | |
1110 | return 0 |
|
773 | return 0 | |
1111 |
|
774 | |||
1112 | self.project = self.projectElement.tag |
|
775 | self.id = self.xml.get('id') | |
1113 |
|
776 | self.name = self.xml.get('name') | ||
1114 |
self. |
|
777 | self.description = self.xml.get('description') | |
1115 | self.name = self.projectElement.get('name') |
|
778 | ||
1116 | self.description = self.projectElement.get('description') |
|
779 | for element in self.xml: | |
1117 |
|
780 | if element.tag == 'ReadUnit': | ||
1118 | readUnitElementList = self.projectElement.iter( |
|
781 | conf = ReadUnitConf() | |
1119 | ReadUnitConf().getElementName()) |
|
782 | conf.readXml(element, self.id, self.err_queue) | |
1120 |
|
783 | self.configurations[conf.id] = conf | ||
1121 | for readUnitElement in readUnitElementList: |
|
784 | elif element.tag == 'ProcUnit': | |
1122 |
|
|
785 | conf = ProcUnitConf() | |
1123 | readUnitConfObj.readXml(readUnitElement, self.id) |
|
786 | input_proc = self.configurations[element.get('inputId')] | |
1124 | self.procUnitConfObjDict[readUnitConfObj.getId()] = readUnitConfObj |
|
787 | conf.readXml(element, self.id, self.err_queue) | |
1125 |
|
788 | self.configurations[conf.id] = conf | ||
1126 | procUnitElementList = self.projectElement.iter( |
|
|||
1127 | ProcUnitConf().getElementName()) |
|
|||
1128 |
|
||||
1129 | for procUnitElement in procUnitElementList: |
|
|||
1130 | procUnitConfObj = ProcUnitConf() |
|
|||
1131 | procUnitConfObj.readXml(procUnitElement, self.id) |
|
|||
1132 | self.procUnitConfObjDict[procUnitConfObj.getId()] = procUnitConfObj |
|
|||
1133 |
|
789 | |||
1134 | self.filename = abs_file |
|
790 | self.filename = abs_file | |
1135 |
|
791 | |||
@@ -1137,28 +793,33 class Project(Process): | |||||
1137 |
|
793 | |||
1138 | def __str__(self): |
|
794 | def __str__(self): | |
1139 |
|
795 | |||
1140 |
|
|
796 | text = '\nProject[id=%s, name=%s, description=%s]\n\n' % ( | |
1141 | self.name, |
|
797 | self.id, | |
1142 | self.description, |
|
798 | self.name, | |
1143 | self.id)) |
|
799 | self.description, | |
|
800 | ) | |||
|
801 | ||||
|
802 | for conf in self.configurations.values(): | |||
|
803 | text += '{}'.format(conf) | |||
1144 |
|
804 | |||
1145 | for procUnitConfObj in self.procUnitConfObjDict.values(): |
|
805 | return text | |
1146 | print(procUnitConfObj) |
|
|||
1147 |
|
806 | |||
1148 | def createObjects(self): |
|
807 | def createObjects(self): | |
1149 |
|
808 | |||
1150 |
|
809 | keys = list(self.configurations.keys()) | ||
1151 | keys = list(self.procUnitConfObjDict.keys()) |
|
|||
1152 | keys.sort() |
|
810 | keys.sort() | |
1153 | for key in keys: |
|
811 | for key in keys: | |
1154 | self.procUnitConfObjDict[key].createObjects() |
|
812 | conf = self.configurations[key] | |
|
813 | conf.createObjects() | |||
|
814 | if conf.inputId is not None: | |||
|
815 | conf.object.setInput(self.configurations[conf.inputId].object) | |||
1155 |
|
816 | |||
1156 | def monitor(self): |
|
817 | def monitor(self): | |
1157 |
|
818 | |||
1158 |
t = Thread(target=self. |
|
819 | t = Thread(target=self._monitor, args=(self.err_queue, self.ctx)) | |
1159 | t.start() |
|
820 | t.start() | |
1160 |
|
821 | |||
1161 |
def |
|
822 | def _monitor(self, queue, ctx): | |
1162 |
|
823 | |||
1163 | import socket |
|
824 | import socket | |
1164 |
|
825 | |||
@@ -1189,13 +850,7 class Project(Process): | |||||
1189 | else: |
|
850 | else: | |
1190 | name, err = self.name, err_msg |
|
851 | name, err = self.name, err_msg | |
1191 |
|
852 | |||
1192 |
time.sleep( |
|
853 | time.sleep(1) | |
1193 |
|
||||
1194 | for conf in self.procUnitConfObjDict.values(): |
|
|||
1195 | for confop in conf.opConfObjList: |
|
|||
1196 | if confop.type == 'external': |
|
|||
1197 | confop.opObj.terminate() |
|
|||
1198 | conf.procUnitObj.terminate() |
|
|||
1199 |
|
854 | |||
1200 | ctx.term() |
|
855 | ctx.term() | |
1201 |
|
856 | |||
@@ -1211,15 +866,14 class Project(Process): | |||||
1211 | subtitle += 'Configuration file: %s\n' % self.filename |
|
866 | subtitle += 'Configuration file: %s\n' % self.filename | |
1212 | subtitle += 'Time: %s\n' % str(datetime.datetime.now()) |
|
867 | subtitle += 'Time: %s\n' % str(datetime.datetime.now()) | |
1213 |
|
868 | |||
1214 |
readUnitConfObj = self.getReadUnit |
|
869 | readUnitConfObj = self.getReadUnit() | |
1215 | if readUnitConfObj: |
|
870 | if readUnitConfObj: | |
1216 | subtitle += '\nInput parameters:\n' |
|
871 | subtitle += '\nInput parameters:\n' | |
1217 | subtitle += '[Data path = %s]\n' % readUnitConfObj.path |
|
872 | subtitle += '[Data path = %s]\n' % readUnitConfObj.parameters['path'] | |
1218 |
subtitle += '[ |
|
873 | subtitle += '[Start date = %s]\n' % readUnitConfObj.parameters['startDate'] | |
1219 |
subtitle += '[ |
|
874 | subtitle += '[End date = %s]\n' % readUnitConfObj.parameters['endDate'] | |
1220 |
subtitle += '[ |
|
875 | subtitle += '[Start time = %s]\n' % readUnitConfObj.parameters['startTime'] | |
1221 |
subtitle += '[ |
|
876 | subtitle += '[End time = %s]\n' % readUnitConfObj.parameters['endTime'] | |
1222 | subtitle += '[End time = %s]\n' % readUnitConfObj.endTime |
|
|||
1223 |
|
877 | |||
1224 | a = Alarm( |
|
878 | a = Alarm( | |
1225 | modes=self.alarm, |
|
879 | modes=self.alarm, | |
@@ -1232,64 +886,33 class Project(Process): | |||||
1232 |
|
886 | |||
1233 | a.start() |
|
887 | a.start() | |
1234 |
|
888 | |||
1235 | def isPaused(self): |
|
|||
1236 | return 0 |
|
|||
1237 |
|
||||
1238 | def isStopped(self): |
|
|||
1239 | return 0 |
|
|||
1240 |
|
||||
1241 | def runController(self): |
|
|||
1242 | ''' |
|
|||
1243 | returns 0 when this process has been stopped, 1 otherwise |
|
|||
1244 | ''' |
|
|||
1245 |
|
||||
1246 | if self.isPaused(): |
|
|||
1247 | print('Process suspended') |
|
|||
1248 |
|
||||
1249 | while True: |
|
|||
1250 | time.sleep(0.1) |
|
|||
1251 |
|
||||
1252 | if not self.isPaused(): |
|
|||
1253 | break |
|
|||
1254 |
|
||||
1255 | if self.isStopped(): |
|
|||
1256 | break |
|
|||
1257 |
|
||||
1258 | print('Process reinitialized') |
|
|||
1259 |
|
||||
1260 | if self.isStopped(): |
|
|||
1261 | print('Process stopped') |
|
|||
1262 | return 0 |
|
|||
1263 |
|
||||
1264 | return 1 |
|
|||
1265 |
|
||||
1266 | def setFilename(self, filename): |
|
889 | def setFilename(self, filename): | |
1267 |
|
890 | |||
1268 | self.filename = filename |
|
891 | self.filename = filename | |
1269 |
|
892 | |||
1270 |
def |
|
893 | def runProcs(self): | |
1271 |
|
894 | |||
1272 | if not os.path.exists('/tmp/schain'): |
|
895 | err = False | |
1273 | os.mkdir('/tmp/schain') |
|
896 | n = len(self.configurations) | |
1274 |
|
897 | |||
1275 | self.ctx = zmq.Context() |
|
898 | while not err: | |
1276 | xpub = self.ctx.socket(zmq.XPUB) |
|
899 | for conf in self.getUnits(): | |
1277 | xpub.bind('ipc:///tmp/schain/{}_pub'.format(self.id)) |
|
900 | ok = conf.run() | |
1278 | xsub = self.ctx.socket(zmq.XSUB) |
|
901 | if ok == 'Error': | |
1279 | xsub.bind('ipc:///tmp/schain/{}_sub'.format(self.id)) |
|
902 | n -= 1 | |
1280 | self.monitor() |
|
903 | continue | |
1281 | try: |
|
904 | elif not ok: | |
1282 | zmq.proxy(xpub, xsub) |
|
905 | break | |
1283 | except zmq.ContextTerminated: |
|
906 | if n == 0: | |
1284 | xpub.close() |
|
907 | err = True | |
1285 | xsub.close() |
|
|||
1286 |
|
908 | |||
1287 | def run(self): |
|
909 | def run(self): | |
1288 |
|
910 | |||
1289 |
log.success('Starting {} |
|
911 | log.success('\nStarting Project {} [id={}]'.format(self.name, self.id), tag='') | |
|
912 | self.started = True | |||
1290 | self.start_time = time.time() |
|
913 | self.start_time = time.time() | |
1291 | self.createObjects() |
|
914 | self.createObjects() | |
1292 |
self. |
|
915 | self.runProcs() | |
1293 | log.success('{} Done (Time: {}s)'.format( |
|
916 | log.success('{} Done (Time: {:4.2f}s)'.format( | |
1294 | self.name, |
|
917 | self.name, | |
1295 | time.time()-self.start_time), '') |
|
918 | time.time()-self.start_time), '') |
@@ -1,1 +0,0 | |||||
1 | from viewcontroller import * No newline at end of file |
|
@@ -1,39 +1,325 | |||||
1 | #!/usr/bin/env python |
|
1 | #!/usr/bin/env python | |
2 | import os |
|
2 | import os | |
3 | import sys |
|
3 | import sys | |
|
4 | import ast | |||
|
5 | ||||
|
6 | from schainpy.controller import Project | |||
|
7 | from schainpy.cli import cli | |||
4 | from schainpy.utils import log |
|
8 | from schainpy.utils import log | |
5 |
|
9 | |||
6 | try: |
|
10 | try: | |
7 | from PyQt4 import QtCore, QtGui |
|
11 | import kivy | |
8 |
from |
|
12 | from kivy.app import App | |
|
13 | from kivy.uix.label import Label | |||
|
14 | from kivy.uix.boxlayout import BoxLayout | |||
|
15 | from kivy.uix.gridlayout import GridLayout | |||
|
16 | from kivy.uix.textinput import TextInput | |||
|
17 | from kivy.uix.button import Button | |||
|
18 | from kivy.uix.dropdown import DropDown | |||
|
19 | from kivy.uix.togglebutton import ToggleButton | |||
|
20 | from kivy.uix.popup import Popup | |||
|
21 | from kivy.uix.filechooser import FileChooserListView | |||
9 | except: |
|
22 | except: | |
10 | log.error( |
|
23 | log.error( | |
11 |
'You should install |
|
24 | 'You should install kivy module in order to run the GUI.') | |
12 | sys.exit() |
|
25 | sys.exit() | |
13 |
|
26 | |||
14 | from schainpy.gui.viewcontroller.initwindow import InitWindow |
|
|||
15 | from schainpy.gui.viewcontroller.basicwindow import BasicWindow |
|
|||
16 | from schainpy.gui.viewcontroller.workspace import Workspace |
|
|||
17 |
|
27 | |||
|
28 | DEFAULTS = { | |||
|
29 | 'path': os.path.expanduser('~'), | |||
|
30 | 'startDate': '2018/01/01', | |||
|
31 | 'endDate': '2020/01/01', | |||
|
32 | 'startTime': '00:00:00', | |||
|
33 | 'endTime': '23:59:59', | |||
|
34 | 'online': '1', | |||
|
35 | 'delay': '30', | |||
|
36 | 'walk': '1', | |||
|
37 | 'show': '1', | |||
|
38 | 'zmin': '10', | |||
|
39 | 'zmax': '40', | |||
|
40 | } | |||
|
41 | ||||
|
42 | ||||
|
43 | class MainLayout(BoxLayout): | |||
|
44 | def __init__(self, **kwargs): | |||
|
45 | super(MainLayout, self).__init__(**kwargs) | |||
|
46 | ||||
|
47 | self.workspace = os.path.join(os.path.expanduser('~'), 'workspace/scripts') | |||
|
48 | self.current_unit_id = None | |||
|
49 | self._units = [] | |||
|
50 | self.project = Project() | |||
|
51 | self.project.setup(id='1', name='test', description='') | |||
|
52 | ||||
|
53 | self.sidebar_left = BoxLayout(orientation='vertical', size_hint_x=0.4, spacing=5) | |||
|
54 | self.body = BoxLayout(orientation='vertical', spacing=5) | |||
|
55 | self.sidebar_right = BoxLayout(orientation='vertical', size_hint_x=0.6, spacing=5) | |||
|
56 | ||||
|
57 | bt_prj = Button(text='Project') | |||
|
58 | bt_prj.bind(on_press=self.show_project) | |||
|
59 | self.sidebar_left.add_widget(bt_prj) | |||
|
60 | ||||
|
61 | bt_add_unit = Button(text='Add Unit') | |||
|
62 | bt_add_unit.bind(on_press=self.select_unit) | |||
|
63 | self.sidebar_left.add_widget(bt_add_unit) | |||
|
64 | ||||
|
65 | bt_add_operation = Button(text='Add Operation') | |||
|
66 | bt_add_operation.bind(on_press=self.select_operation) | |||
|
67 | self.sidebar_left.add_widget(bt_add_operation) | |||
|
68 | ||||
|
69 | bt_import = Button(text='Import') | |||
|
70 | bt_import.bind(on_press=self.load) | |||
|
71 | self.sidebar_left.add_widget(bt_import) | |||
|
72 | ||||
|
73 | bt_export = Button(text='Export') | |||
|
74 | bt_export.bind(on_press=self.export) | |||
|
75 | self.sidebar_left.add_widget(bt_export) | |||
|
76 | ||||
|
77 | bt_run = Button(text='Run') | |||
|
78 | bt_run.bind(on_press=self.run) | |||
|
79 | self.sidebar_left.add_widget(bt_run) | |||
|
80 | ||||
|
81 | bt_stop = Button(text='Stop') | |||
|
82 | bt_stop.bind(on_press = self.stop) | |||
|
83 | self.sidebar_left.add_widget(bt_stop) | |||
|
84 | ||||
|
85 | bt_exit = Button(text = 'Exit', height = 40, size_hint_y = None, background_color=(1, 0, 0, 1)) | |||
|
86 | bt_exit.bind(on_press=App.get_running_app().stop) | |||
|
87 | self.sidebar_left.add_widget(bt_exit) | |||
|
88 | ||||
|
89 | self.add_widget(self.sidebar_left) | |||
|
90 | self.add_widget(self.body) | |||
|
91 | self.add_widget(self.sidebar_right) | |||
|
92 | ||||
|
93 | def update_body(self): | |||
|
94 | ||||
|
95 | self._units = [] | |||
|
96 | self.body.clear_widgets() | |||
|
97 | self.sidebar_right.clear_widgets() | |||
|
98 | ||||
|
99 | for unit in self.project.getUnits(): | |||
|
100 | box = GridLayout(cols=3) | |||
|
101 | bt = ToggleButton(text=unit.name, group='units') | |||
|
102 | bt._obj = unit | |||
|
103 | bt.bind(on_press=self.show_parameters) | |||
|
104 | box.add_widget(bt) | |||
|
105 | self._units.append(bt) | |||
|
106 | ||||
|
107 | for operation in unit.operations: | |||
|
108 | bt_op = Button(text = operation.name, background_color=(1, 0.5, 0, 1)) | |||
|
109 | bt_op._id = unit.id | |||
|
110 | bt_op._obj = operation | |||
|
111 | bt_op.bind(on_press=self.show_parameters) | |||
|
112 | box.add_widget(bt_op) | |||
|
113 | ||||
|
114 | self.body.add_widget(box) | |||
|
115 | ||||
|
116 | print(self.project) | |||
|
117 | ||||
|
118 | def show_parameters(self, instance): | |||
|
119 | ||||
|
120 | obj = instance._obj | |||
|
121 | self.current_unit_id = obj.id | |||
|
122 | self.sidebar_right.clear_widgets() | |||
|
123 | ||||
|
124 | if obj and obj.parameters: | |||
|
125 | self._params = {} | |||
|
126 | ||||
|
127 | for key, value in obj.getParameters().items(): | |||
|
128 | self.sidebar_right.add_widget(Label(text=key)) | |||
|
129 | text = TextInput(text=value, multiline=False) | |||
|
130 | self._params[key] = text | |||
|
131 | self.sidebar_right.add_widget(text) | |||
|
132 | ||||
|
133 | bt_save = Button(text = 'Save', height = 40, size_hint_y = None, background_color=(0, 1, 0, 1)) | |||
|
134 | bt_save._obj = obj | |||
|
135 | if hasattr(instance, '_id'): | |||
|
136 | bt_save._id = instance._id | |||
|
137 | self.current_unit_id = None | |||
|
138 | bt_save.bind(on_press=self.save_parameters) | |||
|
139 | self.sidebar_right.add_widget(bt_save) | |||
|
140 | ||||
|
141 | bt_delete = Button(text = 'Delete', height = 40, size_hint_y = None, background_color=(1, 0, 0, 1)) | |||
|
142 | bt_delete._obj = obj | |||
|
143 | if hasattr(instance, '_id'): | |||
|
144 | bt_delete._id = instance._id | |||
|
145 | self.current_unit_id = obj.id | |||
|
146 | bt_delete.bind(on_press=self.delete_object) | |||
|
147 | self.sidebar_right.add_widget(bt_delete) | |||
|
148 | ||||
|
149 | def save_parameters(self, instance): | |||
|
150 | ||||
|
151 | obj = instance._obj | |||
|
152 | params = {} | |||
|
153 | for key in self._params: | |||
|
154 | if self._params[key]: | |||
|
155 | params[key] = self._params[key].text | |||
|
156 | ||||
|
157 | if hasattr(instance, '_id'): | |||
|
158 | unit = self.project.getProcUnit(instance._id) | |||
|
159 | op = unit.getOperation(obj.id) | |||
|
160 | op.update(**params) | |||
|
161 | else: | |||
|
162 | unit = self.project.getProcUnit(obj.id) | |||
|
163 | unit.update(**params) | |||
|
164 | ||||
|
165 | def delete_object(self, instance): | |||
|
166 | ||||
|
167 | obj = instance._obj | |||
|
168 | ||||
|
169 | if hasattr(instance, '_id'): | |||
|
170 | unit = self.project.getProcUnit(instance._id) | |||
|
171 | unit.removeOperation(obj.id) | |||
|
172 | else: | |||
|
173 | self.project.removeProcUnit(obj.id) | |||
|
174 | ||||
|
175 | self.project.updateId(self.project.id) | |||
|
176 | self.update_body() | |||
|
177 | ||||
|
178 | def show_project(self, instance): | |||
|
179 | ||||
|
180 | self.sidebar_right.clear_widgets() | |||
|
181 | self._params = {} | |||
|
182 | for label in ['Id', 'Name', 'Description']: | |||
|
183 | self.sidebar_right.add_widget(Label(text=label)) | |||
|
184 | text = TextInput(text=getattr(self.project, label.lower()), multiline=False) | |||
|
185 | self._params[label] = text | |||
|
186 | self.sidebar_right.add_widget(text) | |||
|
187 | ||||
|
188 | self.sidebar_right.add_widget(Label(text='Workspace')) | |||
|
189 | text = TextInput(text=getattr(self, 'workspace'), multiline=False) | |||
|
190 | self._params['Workspace'] = text | |||
|
191 | self.sidebar_right.add_widget(text) | |||
|
192 | ||||
|
193 | bt_save = Button(text = 'Save', height = 40, size_hint_y = None, background_color=(0, 1, 0, 1)) | |||
|
194 | bt_save.bind(on_press = self.save_project_parameters) | |||
|
195 | self.sidebar_right.add_widget(bt_save) | |||
|
196 | ||||
|
197 | def save_project_parameters(self, instance): | |||
|
198 | ||||
|
199 | for label in ['Id', 'Name', 'Description']: | |||
|
200 | setattr(self.project, label.lower(), self._params[label].text) | |||
|
201 | ||||
|
202 | setattr(self, 'workspace', self._params['Workspace'].text) | |||
|
203 | ||||
|
204 | def select_unit(self, instance): | |||
|
205 | ||||
|
206 | self.sidebar_right.clear_widgets() | |||
|
207 | bt_main = Button(text = 'Select Unit', height = 40, size_hint_y = None) | |||
|
208 | dropdown = DropDown() | |||
|
209 | ||||
|
210 | for unit in cli.getProcs(): | |||
|
211 | ||||
|
212 | btn = Button(text = unit, size_hint_y = None, height = 40) | |||
|
213 | btn.bind(on_release = lambda btn: dropdown.select(btn.text)) | |||
|
214 | dropdown.add_widget(btn) | |||
|
215 | ||||
|
216 | bt_main.bind(on_release = dropdown.open) | |||
|
217 | dropdown.bind(on_select = lambda instance, x: setattr(bt_main, 'text', x)) | |||
|
218 | ||||
|
219 | bt_add = Button(text = 'Add', height = 40, size_hint_y = None, background_color=(0, 1, 0, 1)) | |||
|
220 | bt_add.bind(on_press = lambda instance: self.add_unit(bt_main.text)) | |||
|
221 | ||||
|
222 | self.sidebar_right.add_widget(bt_main) | |||
|
223 | self.sidebar_right.add_widget(bt_add) | |||
|
224 | ||||
|
225 | def add_unit(self, s): | |||
|
226 | ||||
|
227 | if s: | |||
|
228 | if 'Reader' in s: | |||
|
229 | unit = self.project.addReadUnit(name=s) | |||
|
230 | else: | |||
|
231 | *_, last = self.project.getUnits() | |||
|
232 | unit = self.project.addProcUnit(name=s, inputId=last.id) | |||
|
233 | ||||
|
234 | keys = cli.getArgs(unit.name) | |||
|
235 | values = [DEFAULTS[key] if key in DEFAULTS else '' for key in keys] | |||
|
236 | unit.update(**dict(zip(keys, values))) | |||
|
237 | self.update_body() | |||
|
238 | ||||
|
239 | def select_operation(self, instance): | |||
|
240 | ||||
|
241 | self.sidebar_right.clear_widgets() | |||
|
242 | btns = [bt.state == 'down' for bt in self._units] | |||
|
243 | if True in btns: | |||
|
244 | bt_main = Button(text = 'Select Operation', height = 40, size_hint_y = None) | |||
|
245 | dropdown = DropDown() | |||
|
246 | ||||
|
247 | for unit in cli.getOperations(): | |||
|
248 | ||||
|
249 | btn = Button(text = unit, size_hint_y = None, height = 40) | |||
|
250 | btn.bind(on_release = lambda btn: dropdown.select(btn.text)) | |||
|
251 | dropdown.add_widget(btn) | |||
|
252 | ||||
|
253 | bt_main.bind(on_release = dropdown.open) | |||
|
254 | dropdown.bind(on_select = lambda instance, x: setattr(bt_main, 'text', x)) | |||
|
255 | ||||
|
256 | bt_add = Button(text = 'Add', height = 40, size_hint_y = None, background_color=(0, 1, 0, 1)) | |||
|
257 | bt_add.bind(on_press = lambda instance: self.add_operation(bt_main.text)) | |||
|
258 | ||||
|
259 | self.sidebar_right.add_widget(bt_main) | |||
|
260 | self.sidebar_right.add_widget(bt_add) | |||
|
261 | else: | |||
|
262 | self.sidebar_right.add_widget(Label(text='Select Unit')) | |||
|
263 | ||||
|
264 | def add_operation(self, s): | |||
|
265 | ||||
|
266 | if s: | |||
|
267 | unit = self.project.getProcUnit(self.current_unit_id) | |||
|
268 | op = unit.addOperation(name=s) | |||
|
269 | keys = cli.getArgs(op.name) | |||
|
270 | values = [DEFAULTS[key] if key in DEFAULTS else '' for key in keys] | |||
|
271 | op.update(**dict(zip(keys, values))) | |||
|
272 | self.update_body() | |||
|
273 | ||||
|
274 | def run(self, instance): | |||
|
275 | ||||
|
276 | if self.project and self.project.is_alive(): | |||
|
277 | self.sidebar_right.clear_widgets() | |||
|
278 | self.sidebar_right.add_widget(Label(text='Project running')) | |||
|
279 | else: | |||
|
280 | if self.project.exitcode is None: | |||
|
281 | self.project.start() | |||
|
282 | else: | |||
|
283 | self.project = self.project.clone() | |||
|
284 | self.project.start() | |||
|
285 | ||||
|
286 | def stop(self, instance): | |||
|
287 | ||||
|
288 | if self.project and self.project.is_alive(): | |||
|
289 | self.project.kill() | |||
|
290 | log.error('Project Stopped by user', 'GUI') | |||
|
291 | else: | |||
|
292 | self.sidebar_right.clear_widgets() | |||
|
293 | self.sidebar_right.add_widget(Label(text='Project not running')) | |||
|
294 | ||||
|
295 | def load(self, instance): | |||
|
296 | ||||
|
297 | self.sidebar_right.clear_widgets() | |||
|
298 | textinput = FileChooserListView( | |||
|
299 | path=self.workspace, size_hint=(1, 1), dirselect=False, filters=['*.xml']) | |||
18 |
|
300 | |||
19 | def main(): |
|
301 | self.sidebar_right.add_widget(textinput) | |
|
302 | bt_open = Button(text = 'Open', height = 40, size_hint_y = None, background_color=(0, 1, 0, 1)) | |||
|
303 | bt_open.textinput = textinput | |||
|
304 | bt_open.bind(on_press = self.load_file) | |||
|
305 | self.sidebar_right.add_widget(bt_open) | |||
|
306 | ||||
|
307 | def load_file(self, instance): | |||
20 |
|
308 | |||
21 | app = QtGui.QApplication(sys.argv) |
|
309 | self.project.readXml(instance.textinput.selection[0]) | |
|
310 | self.update_body() | |||
22 |
|
311 | |||
23 | Welcome = InitWindow() |
|
312 | def export(self, instance): | |
24 |
|
313 | |||
25 | if not Welcome.exec_(): |
|
314 | filename = os.path.join(self.workspace, '{}.xml'.format(self.project.name)) | |
26 | sys.exit(-1) |
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315 | self.project.writeXml(filename) | |
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316 | log.success('File created: {}'.format(filename), 'GUI') | |||
27 |
|
317 | |||
28 | WorkPathspace = Workspace() |
|
|||
29 | if not WorkPathspace.exec_(): |
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|||
30 | sys.exit(-1) |
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|||
31 |
|
318 | |||
32 | MainGUI = BasicWindow() |
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319 | class SignalChainApp(App): | |
33 | MainGUI.setWorkSpaceGUI(WorkPathspace.dirComBox.currentText()) |
|
320 | def build(self): | |
34 | MainGUI.show() |
|
321 | return MainLayout(spacing=10) | |
35 | sys.exit(app.exec_()) |
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|||
36 |
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322 | |||
37 |
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323 | |||
38 | if __name__ == "__main__": |
|
324 | if __name__ == "__main__": | |
39 | main() |
|
325 | SignalChainApp().run() No newline at end of file |
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The requested commit or file is too big and content was truncated. Show full diff |
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The requested commit or file is too big and content was truncated. Show full diff |
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The requested commit or file is too big and content was truncated. Show full diff |
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The requested commit or file is too big and content was truncated. Show full diff |
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The requested commit or file is too big and content was truncated. Show full diff |
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The requested commit or file is too big and content was truncated. Show full diff |
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The requested commit or file is too big and content was truncated. Show full diff |
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NO CONTENT: file was removed | ||
The requested commit or file is too big and content was truncated. Show full diff |
1 | NO CONTENT: file was removed |
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NO CONTENT: file was removed | ||
The requested commit or file is too big and content was truncated. Show full diff |
1 | NO CONTENT: file was removed |
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NO CONTENT: file was removed | ||
The requested commit or file is too big and content was truncated. Show full diff |
1 | NO CONTENT: file was removed |
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NO CONTENT: file was removed | ||
The requested commit or file is too big and content was truncated. Show full diff |
1 | NO CONTENT: file was removed |
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NO CONTENT: file was removed | ||
The requested commit or file is too big and content was truncated. Show full diff |
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