| @@ -1,686 +1,687 | |||
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1 | 1 | ''' |
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2 | 2 | @author: Daniel Suarez |
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3 | 3 | ''' |
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4 | 4 | |
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5 | 5 | import os |
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6 | 6 | import sys |
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7 | 7 | import glob |
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8 | 8 | import fnmatch |
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9 | 9 | import datetime |
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10 | 10 | import time |
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11 | 11 | import re |
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12 | 12 | import h5py |
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13 | 13 | import numpy |
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14 | 14 | |
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15 | 15 | from model.proc.jroproc_base import ProcessingUnit, Operation |
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16 | 16 | from model.data.jroamisr import AMISR |
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17 | 17 | |
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18 | 18 | class RadacHeader(): |
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19 | 19 | def __init__(self, fp): |
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20 | 20 | header = 'Raw11/Data/RadacHeader' |
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21 | 21 | self.beamCodeByPulse = fp.get(header+'/BeamCode') |
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22 | 22 | self.beamCode = fp.get('Raw11/Data/Beamcodes') |
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23 | 23 | self.code = fp.get(header+'/Code') |
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24 | 24 | self.frameCount = fp.get(header+'/FrameCount') |
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25 | 25 | self.modeGroup = fp.get(header+'/ModeGroup') |
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26 | 26 | self.nsamplesPulse = fp.get(header+'/NSamplesPulse') |
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27 | 27 | self.pulseCount = fp.get(header+'/PulseCount') |
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28 | 28 | self.radacTime = fp.get(header+'/RadacTime') |
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29 | 29 | self.timeCount = fp.get(header+'/TimeCount') |
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30 | 30 | self.timeStatus = fp.get(header+'/TimeStatus') |
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31 | 31 | |
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32 | 32 | self.nrecords = self.pulseCount.shape[0] #nblocks |
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33 | 33 | self.npulses = self.pulseCount.shape[1] #nprofile |
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34 | 34 | self.nsamples = self.nsamplesPulse[0,0] #ngates |
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35 | 35 | self.nbeams = self.beamCode.shape[1] |
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36 | 36 | |
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37 | 37 | |
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38 | 38 | def getIndexRangeToPulse(self, idrecord=0): |
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39 | 39 | #indexToZero = numpy.where(self.pulseCount.value[idrecord,:]==0) |
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40 | 40 | #startPulseCountId = indexToZero[0][0] |
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41 | 41 | #endPulseCountId = startPulseCountId - 1 |
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42 | 42 | #range1 = numpy.arange(startPulseCountId,self.npulses,1) |
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43 | 43 | #range2 = numpy.arange(0,startPulseCountId,1) |
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44 | 44 | #return range1, range2 |
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45 | 45 | zero = 0 |
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46 | 46 | npulse = max(self.pulseCount[0,:]+1)-1 |
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47 | 47 | looking_index = numpy.where(self.pulseCount.value[idrecord,:]==npulse)[0] |
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48 | 48 | getLastIndex = looking_index[-1] |
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49 | 49 | index_data = numpy.arange(0,getLastIndex+1,1) |
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50 | 50 | index_buffer = numpy.arange(getLastIndex+1,self.npulses,1) |
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51 | 51 | return index_data, index_buffer |
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52 | 52 | |
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53 | 53 | class AMISRReader(ProcessingUnit): |
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54 | 54 | |
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55 | 55 | path = None |
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56 | 56 | startDate = None |
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57 | 57 | endDate = None |
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58 | 58 | startTime = None |
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59 | 59 | endTime = None |
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60 | 60 | walk = None |
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61 | 61 | isConfig = False |
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62 | 62 | |
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63 | 63 | def __init__(self): |
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64 | 64 | self.set = None |
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65 | 65 | self.subset = None |
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66 | 66 | self.extension_file = '.h5' |
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67 | 67 | self.dtc_str = 'dtc' |
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68 | 68 | self.dtc_id = 0 |
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69 | 69 | self.status = True |
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70 | 70 | self.isConfig = False |
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71 | 71 | self.dirnameList = [] |
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72 | 72 | self.filenameList = [] |
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73 | 73 | self.fileIndex = None |
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74 | 74 | self.flagNoMoreFiles = False |
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75 | 75 | self.flagIsNewFile = 0 |
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76 | 76 | self.filename = '' |
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77 | 77 | self.amisrFilePointer = None |
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78 | 78 | self.radacHeaderObj = None |
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79 | 79 | self.dataOut = self.__createObjByDefault() |
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80 | 80 | self.datablock = None |
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81 | 81 | self.rest_datablock = None |
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82 | 82 | self.range = None |
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83 | 83 | self.idrecord_count = 0 |
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84 | 84 | self.profileIndex = 0 |
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85 | 85 | self.index_amisr_sample = None |
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86 | 86 | self.index_amisr_buffer = None |
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87 | 87 | self.beamCodeByFrame = None |
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88 | 88 | self.radacTimeByFrame = None |
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89 | 89 | #atributos originales tal y como esta en el archivo de datos |
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90 | 90 | self.beamCodesFromFile = None |
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91 | 91 | self.radacTimeFromFile = None |
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92 | 92 | self.rangeFromFile = None |
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93 | 93 | self.dataByFrame = None |
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94 | 94 | self.dataset = None |
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95 | 95 | |
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96 | 96 | self.beamCodeDict = {} |
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97 | 97 | self.beamRangeDict = {} |
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98 | 98 | |
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99 | 99 | #experiment cgf file |
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100 | 100 | self.npulsesint_fromfile = None |
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101 | 101 | self.recordsperfile_fromfile = None |
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102 | 102 | self.nbeamcodes_fromfile = None |
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103 | 103 | self.ngates_fromfile = None |
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104 | 104 | self.ippSeconds_fromfile = None |
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105 | 105 | self.frequency_h5file = None |
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106 | 106 | |
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107 | 107 | |
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108 | 108 | self.__firstFile = True |
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109 | 109 | self.buffer_radactime = None |
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110 | 110 | |
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111 | 111 | self.index4_schain_datablock = None |
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112 | 112 | self.index4_buffer = None |
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113 | 113 | self.schain_datablock = None |
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114 | 114 | self.buffer = None |
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115 | 115 | self.linear_pulseCount = None |
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116 | 116 | self.npulseByFrame = None |
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117 | 117 | self.profileIndex_offset = None |
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118 | 118 | self.timezone = 'ut' |
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119 | 119 | |
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120 | 120 | self.__waitForNewFile = 20 |
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121 | 121 | self.__filename_online = None |
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122 | 122 | |
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123 | 123 | def __createObjByDefault(self): |
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124 | 124 | |
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125 | 125 | dataObj = AMISR() |
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126 | 126 | |
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127 | 127 | return dataObj |
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128 | 128 | |
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129 | 129 | def __setParameters(self,path='', startDate='',endDate='',startTime='', endTime='', walk=''): |
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130 | 130 | self.path = path |
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131 | 131 | self.startDate = startDate |
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132 | 132 | self.endDate = endDate |
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133 | 133 | self.startTime = startTime |
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134 | 134 | self.endTime = endTime |
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135 | 135 | self.walk = walk |
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136 | 136 | |
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137 | 137 | def __checkPath(self): |
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138 | 138 | if os.path.exists(self.path): |
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139 | 139 | self.status = 1 |
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140 | 140 | else: |
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141 | 141 | self.status = 0 |
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142 | 142 | print 'Path:%s does not exists'%self.path |
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143 | 143 | |
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144 | 144 | return |
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145 | 145 | |
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146 | 146 | def __selDates(self, amisr_dirname_format): |
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147 | 147 | try: |
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148 | 148 | year = int(amisr_dirname_format[0:4]) |
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149 | 149 | month = int(amisr_dirname_format[4:6]) |
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150 | 150 | dom = int(amisr_dirname_format[6:8]) |
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151 | 151 | thisDate = datetime.date(year,month,dom) |
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152 | 152 | |
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153 | 153 | if (thisDate>=self.startDate and thisDate <= self.endDate): |
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154 | 154 | return amisr_dirname_format |
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155 | 155 | except: |
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156 | 156 | return None |
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157 | 157 | |
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158 | 158 | def __findDataForDates(self,online=False): |
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159 | 159 | |
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160 | 160 | |
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161 | 161 | |
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162 | 162 | if not(self.status): |
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163 | 163 | return None |
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164 | 164 | |
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165 | 165 | pat = '\d+.\d+' |
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166 | 166 | dirnameList = [re.search(pat,x) for x in os.listdir(self.path)] |
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167 | 167 | dirnameList = filter(lambda x:x!=None,dirnameList) |
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168 | 168 | dirnameList = [x.string for x in dirnameList] |
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169 | 169 | if not(online): |
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170 | 170 | dirnameList = [self.__selDates(x) for x in dirnameList] |
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171 | 171 | dirnameList = filter(lambda x:x!=None,dirnameList) |
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172 | 172 | if len(dirnameList)>0: |
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173 | 173 | self.status = 1 |
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174 | 174 | self.dirnameList = dirnameList |
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175 | 175 | self.dirnameList.sort() |
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176 | 176 | else: |
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177 | 177 | self.status = 0 |
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178 | 178 | return None |
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179 | 179 | |
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180 | 180 | def __getTimeFromData(self): |
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181 | 181 | startDateTime_Reader = datetime.datetime.combine(self.startDate,self.startTime) |
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182 | 182 | endDateTime_Reader = datetime.datetime.combine(self.endDate,self.endTime) |
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183 | 183 | |
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184 | 184 | print 'Filtering Files from %s to %s'%(startDateTime_Reader, endDateTime_Reader) |
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185 | 185 | print '........................................' |
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186 | 186 | filter_filenameList = [] |
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187 | 187 | self.filenameList.sort() |
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188 | 188 | for i in range(len(self.filenameList)-1): |
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189 | 189 | filename = self.filenameList[i] |
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190 | 190 | fp = h5py.File(filename,'r') |
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191 | 191 | time_str = fp.get('Time/RadacTimeString') |
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192 | 192 | |
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193 | 193 | startDateTimeStr_File = time_str[0][0].split('.')[0] |
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194 | 194 | junk = time.strptime(startDateTimeStr_File, '%Y-%m-%d %H:%M:%S') |
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195 | 195 | startDateTime_File = datetime.datetime(junk.tm_year,junk.tm_mon,junk.tm_mday,junk.tm_hour, junk.tm_min, junk.tm_sec) |
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196 | 196 | |
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197 | 197 | endDateTimeStr_File = time_str[-1][-1].split('.')[0] |
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198 | 198 | junk = time.strptime(endDateTimeStr_File, '%Y-%m-%d %H:%M:%S') |
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199 | 199 | endDateTime_File = datetime.datetime(junk.tm_year,junk.tm_mon,junk.tm_mday,junk.tm_hour, junk.tm_min, junk.tm_sec) |
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200 | 200 | |
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201 | 201 | fp.close() |
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202 | 202 | |
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203 | 203 | if self.timezone == 'lt': |
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204 | 204 | startDateTime_File = startDateTime_File - datetime.timedelta(minutes = 300) |
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205 | 205 | endDateTime_File = endDateTime_File - datetime.timedelta(minutes = 300) |
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206 | 206 | |
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207 | 207 | if (endDateTime_File>=startDateTime_Reader and endDateTime_File<endDateTime_Reader): |
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208 | 208 | #self.filenameList.remove(filename) |
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209 | 209 | filter_filenameList.append(filename) |
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210 | 210 | |
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211 | 211 | filter_filenameList.sort() |
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212 | 212 | self.filenameList = filter_filenameList |
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213 | 213 | return 1 |
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214 | 214 | |
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215 | 215 | def __filterByGlob1(self, dirName): |
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216 | 216 | filter_files = glob.glob1(dirName, '*.*%s'%self.extension_file) |
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217 | 217 | filterDict = {} |
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218 | 218 | filterDict.setdefault(dirName) |
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219 | 219 | filterDict[dirName] = filter_files |
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220 | 220 | return filterDict |
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221 | 221 | |
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222 | 222 | def __getFilenameList(self, fileListInKeys, dirList): |
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223 | 223 | for value in fileListInKeys: |
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224 | 224 | dirName = value.keys()[0] |
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225 | 225 | for file in value[dirName]: |
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226 | 226 | filename = os.path.join(dirName, file) |
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227 | 227 | self.filenameList.append(filename) |
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228 | 228 | |
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229 | 229 | |
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230 | 230 | def __selectDataForTimes(self, online=False): |
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231 | 231 | #aun no esta implementado el filtro for tiempo |
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232 | 232 | if not(self.status): |
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233 | 233 | return None |
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234 | 234 | |
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235 | 235 | dirList = [os.path.join(self.path,x) for x in self.dirnameList] |
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236 | 236 | |
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237 | 237 | fileListInKeys = [self.__filterByGlob1(x) for x in dirList] |
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238 | 238 | |
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239 | 239 | self.__getFilenameList(fileListInKeys, dirList) |
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240 | 240 | if not(online): |
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241 | 241 | #filtro por tiempo |
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242 | 242 | if not(self.all): |
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243 | 243 | self.__getTimeFromData() |
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244 | 244 | |
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245 | 245 | if len(self.filenameList)>0: |
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246 | 246 | self.status = 1 |
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247 | 247 | self.filenameList.sort() |
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248 | 248 | else: |
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249 | 249 | self.status = 0 |
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250 | 250 | return None |
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251 | 251 | |
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252 | 252 | else: |
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253 | 253 | #get the last file - 1 |
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254 | 254 | self.filenameList = [self.filenameList[-2]] |
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255 | 255 | |
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256 | 256 | new_dirnameList = [] |
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257 | 257 | for dirname in self.dirnameList: |
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258 | 258 | junk = numpy.array([dirname in x for x in self.filenameList]) |
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259 | 259 | junk_sum = junk.sum() |
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260 | 260 | if junk_sum > 0: |
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261 | 261 | new_dirnameList.append(dirname) |
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262 | 262 | self.dirnameList = new_dirnameList |
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263 | 263 | return 1 |
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264 | 264 | |
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265 | 265 | def __searchFilesOnline(self, |
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266 | 266 | path, |
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267 | 267 | walk=True): |
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268 | 268 | |
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269 | 269 | startDate = datetime.datetime.utcnow().date() |
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270 | 270 | endDate = datetime.datetime.utcnow().date() |
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271 | 271 | |
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272 | 272 | self.__setParameters(path=path, startDate=startDate, endDate=endDate, walk=walk) |
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273 | 273 | |
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274 | 274 | self.__checkPath() |
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275 | 275 | |
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276 | 276 | self.__findDataForDates(online=True) |
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277 | 277 | |
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278 | 278 | self.dirnameList = [self.dirnameList[-1]] |
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279 | 279 | |
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280 | 280 | self.__selectDataForTimes(online=True) |
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281 | 281 | |
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282 | 282 | return |
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283 | 283 | |
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284 | 284 | |
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285 | 285 | def __searchFilesOffline(self, |
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286 | 286 | path, |
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287 | 287 | startDate, |
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288 | 288 | endDate, |
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289 | 289 | startTime=datetime.time(0,0,0), |
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290 | 290 | endTime=datetime.time(23,59,59), |
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291 | 291 | walk=True): |
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292 | 292 | |
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293 | 293 | self.__setParameters(path, startDate, endDate, startTime, endTime, walk) |
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294 | 294 | |
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295 | 295 | self.__checkPath() |
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296 | 296 | |
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297 | 297 | self.__findDataForDates() |
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298 | 298 | |
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299 | 299 | self.__selectDataForTimes() |
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300 | 300 | |
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301 | 301 | for i in range(len(self.filenameList)): |
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302 | 302 | print "%s" %(self.filenameList[i]) |
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303 | 303 | |
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304 | 304 | return |
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305 | 305 | |
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306 | 306 | def __setNextFileOffline(self): |
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307 | 307 | idFile = self.fileIndex |
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308 | 308 | |
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309 | 309 | while (True): |
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310 | 310 | idFile += 1 |
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311 | 311 | if not(idFile < len(self.filenameList)): |
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312 | 312 | self.flagNoMoreFiles = 1 |
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313 | 313 | print "No more Files" |
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314 | 314 | return 0 |
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315 | 315 | |
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316 | 316 | filename = self.filenameList[idFile] |
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317 | 317 | |
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318 | 318 | amisrFilePointer = h5py.File(filename,'r') |
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319 | 319 | |
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320 | 320 | break |
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321 | 321 | |
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322 | 322 | self.flagIsNewFile = 1 |
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323 | 323 | self.fileIndex = idFile |
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324 | 324 | self.filename = filename |
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325 | 325 | |
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326 | 326 | self.amisrFilePointer = amisrFilePointer |
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327 | 327 | |
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328 | 328 | print "Setting the file: %s"%self.filename |
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329 | 329 | |
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330 | 330 | return 1 |
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331 | 331 | |
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332 | 332 | |
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333 | 333 | def __setNextFileOnline(self): |
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334 | 334 | filename = self.filenameList[0] |
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335 | 335 | if self.__filename_online != None: |
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336 | 336 | self.__selectDataForTimes(online=True) |
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337 | 337 | filename = self.filenameList[0] |
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338 | 338 | while self.__filename_online == filename: |
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339 | 339 | print 'waiting %d seconds to get a new file...'%(self.__waitForNewFile) |
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340 | 340 | time.sleep(self.__waitForNewFile) |
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341 | 341 | self.__selectDataForTimes(online=True) |
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342 | 342 | filename = self.filenameList[0] |
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343 | 343 | |
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344 | 344 | self.__filename_online = filename |
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345 | 345 | |
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346 | 346 | self.amisrFilePointer = h5py.File(filename,'r') |
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347 | 347 | self.flagIsNewFile = 1 |
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348 | 348 | self.filename = filename |
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349 | 349 | print "Setting the file: %s"%self.filename |
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350 | 350 | return 1 |
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351 | 351 | |
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352 | 352 | |
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353 | 353 | def __readHeader(self): |
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354 | 354 | self.radacHeaderObj = RadacHeader(self.amisrFilePointer) |
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355 | 355 | |
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356 | 356 | #update values from experiment cfg file |
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357 | 357 | if self.radacHeaderObj.nrecords == self.recordsperfile_fromfile: |
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358 | 358 | self.radacHeaderObj.nrecords = self.recordsperfile_fromfile |
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359 | 359 | self.radacHeaderObj.nbeams = self.nbeamcodes_fromfile |
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360 | 360 | self.radacHeaderObj.npulses = self.npulsesint_fromfile |
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361 | 361 | self.radacHeaderObj.nsamples = self.ngates_fromfile |
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362 | 362 | |
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363 | 363 | #looking index list for data |
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364 | 364 | start_index = self.radacHeaderObj.pulseCount[0,:][0] |
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365 | 365 | end_index = self.radacHeaderObj.npulses |
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366 | 366 | range4data = range(start_index, end_index) |
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367 | 367 | self.index4_schain_datablock = numpy.array(range4data) |
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368 | 368 | |
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369 | 369 | buffer_start_index = 0 |
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370 | 370 | buffer_end_index = self.radacHeaderObj.pulseCount[0,:][0] |
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371 | 371 | range4buffer = range(buffer_start_index, buffer_end_index) |
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372 | 372 | self.index4_buffer = numpy.array(range4buffer) |
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373 | 373 | |
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374 | 374 | self.linear_pulseCount = numpy.array(range4data + range4buffer) |
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375 | 375 | self.npulseByFrame = max(self.radacHeaderObj.pulseCount[0,:]+1) |
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376 | 376 | |
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377 | 377 | #get tuning frequency |
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378 | 378 | frequency_h5file_dataset = self.amisrFilePointer.get('Rx'+'/TuningFrequency') |
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379 | 379 | self.frequency_h5file = frequency_h5file_dataset[0,0] |
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380 | 380 | |
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381 | 381 | self.flagIsNewFile = 1 |
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382 | 382 | |
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383 | 383 | def __getBeamCode(self): |
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384 | 384 | self.beamCodeDict = {} |
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385 | 385 | self.beamRangeDict = {} |
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386 | 386 | |
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387 | 387 | beamCodeMap = self.amisrFilePointer.get('Setup/BeamcodeMap') |
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388 | 388 | |
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389 | 389 | for i in range(len(self.radacHeaderObj.beamCode[0,:])): |
|
|
390 | 390 | self.beamCodeDict.setdefault(i) |
|
|
391 | 391 | self.beamRangeDict.setdefault(i) |
|
|
392 | 392 | beamcodeValue = self.radacHeaderObj.beamCode[0,i] |
|
|
393 | 393 | beamcodeIndex = numpy.where(beamCodeMap[:,0] == beamcodeValue)[0][0] |
|
|
394 | 394 | x = beamCodeMap[beamcodeIndex][1] |
|
|
395 | 395 | y = beamCodeMap[beamcodeIndex][2] |
|
|
396 | 396 | z = beamCodeMap[beamcodeIndex][3] |
|
|
397 | 397 | self.beamCodeDict[i] = [beamcodeValue, x, y, z] |
|
|
398 | 398 | |
|
|
399 | 399 | just4record0 = self.radacHeaderObj.beamCodeByPulse[0,:] |
|
|
400 | 400 | |
|
|
401 | 401 | for i in range(len(self.beamCodeDict.values())): |
|
|
402 | 402 | xx = numpy.where(just4record0==self.beamCodeDict.values()[i][0]) |
|
|
403 | 403 | indexPulseByBeam = self.linear_pulseCount[xx[0]] |
|
|
404 | 404 | self.beamRangeDict[i] = indexPulseByBeam |
|
|
405 | 405 | |
|
|
406 | 406 | def __getExpParameters(self): |
|
|
407 | 407 | if not(self.status): |
|
|
408 | 408 | return None |
|
|
409 | 409 | |
|
|
410 | 410 | experimentCfgPath = os.path.join(self.path, self.dirnameList[0], 'Setup') |
|
|
411 | 411 | |
|
|
412 | 412 | expFinder = glob.glob1(experimentCfgPath,'*.exp') |
|
|
413 | 413 | if len(expFinder)== 0: |
|
|
414 | 414 | self.status = 0 |
|
|
415 | 415 | return None |
|
|
416 | 416 | |
|
|
417 | 417 | experimentFilename = os.path.join(experimentCfgPath,expFinder[0]) |
|
|
418 | 418 | |
|
|
419 | 419 | f = open(experimentFilename) |
|
|
420 | 420 | lines = f.readlines() |
|
|
421 | 421 | f.close() |
|
|
422 | 422 | |
|
|
423 | 423 | parmsList = ['npulsesint*','recordsperfile*','nbeamcodes*','ngates*'] |
|
|
424 | 424 | filterList = [fnmatch.filter(lines, x) for x in parmsList] |
|
|
425 | 425 | |
|
|
426 | 426 | |
|
|
427 | 427 | values = [re.sub(r'\D',"",x[0]) for x in filterList] |
|
|
428 | 428 | |
|
|
429 | 429 | self.npulsesint_fromfile = int(values[0]) |
|
|
430 | 430 | self.recordsperfile_fromfile = int(values[1]) |
|
|
431 | 431 | self.nbeamcodes_fromfile = int(values[2]) |
|
|
432 | 432 | self.ngates_fromfile = int(values[3]) |
|
|
433 | 433 | |
|
|
434 | 434 | tufileFinder = fnmatch.filter(lines, 'tufile=*') |
|
|
435 | 435 | tufile = tufileFinder[0].split('=')[1].split('\n')[0] |
|
|
436 | 436 | tufile = tufile.split('\r')[0] |
|
|
437 | 437 | tufilename = os.path.join(experimentCfgPath,tufile) |
|
|
438 | 438 | |
|
|
439 | 439 | f = open(tufilename) |
|
|
440 | 440 | lines = f.readlines() |
|
|
441 | 441 | f.close() |
|
|
442 | 442 | self.ippSeconds_fromfile = float(lines[1].split()[2])/1E6 |
|
|
443 | 443 | |
|
|
444 | 444 | |
|
|
445 | 445 | self.status = 1 |
|
|
446 | 446 | |
|
|
447 | 447 | def __setIdsAndArrays(self): |
|
|
448 | 448 | self.dataByFrame = self.__setDataByFrame() |
|
|
449 | 449 | self.beamCodeByFrame = self.amisrFilePointer.get('Raw11/Data/RadacHeader/BeamCode').value[0, :] |
|
|
450 | 450 | self.readRanges() |
|
|
451 | 451 | self.index_amisr_sample, self.index_amisr_buffer = self.radacHeaderObj.getIndexRangeToPulse(0) |
|
|
452 | 452 | self.radacTimeByFrame = numpy.zeros(self.radacHeaderObj.npulses) |
|
|
453 | 453 | if len(self.index_amisr_buffer) > 0: |
|
|
454 | 454 | self.buffer_radactime = numpy.zeros_like(self.radacTimeByFrame) |
|
|
455 | 455 | |
|
|
456 | 456 | |
|
|
457 | 457 | def __setNextFile(self,online=False): |
|
|
458 | 458 | |
|
|
459 | 459 | if not(online): |
|
|
460 | 460 | newFile = self.__setNextFileOffline() |
|
|
461 | 461 | else: |
|
|
462 | 462 | newFile = self.__setNextFileOnline() |
|
|
463 | 463 | |
|
|
464 | 464 | if not(newFile): |
|
|
465 | 465 | return 0 |
|
|
466 | 466 | |
|
|
467 | 467 | self.__readHeader() |
|
|
468 | 468 | |
|
|
469 | 469 | if self.__firstFile: |
|
|
470 | 470 | self.__setIdsAndArrays() |
|
|
471 | 471 | self.__firstFile = False |
|
|
472 | 472 | |
|
|
473 | 473 | self.__getBeamCode() |
|
|
474 | 474 | self.readDataBlock() |
|
|
475 | 475 | |
|
|
476 | 476 | |
|
|
477 | 477 | def setup(self,path=None, |
|
|
478 | 478 | startDate=None, |
|
|
479 | 479 | endDate=None, |
|
|
480 | 480 | startTime=datetime.time(0,0,0), |
|
|
481 | 481 | endTime=datetime.time(23,59,59), |
|
|
482 | 482 | walk=True, |
|
|
483 | 483 | timezone='ut', |
|
|
484 | 484 | all=0, |
|
|
485 | 485 | online=False): |
|
|
486 | 486 | |
|
|
487 | 487 | self.timezone = timezone |
|
|
488 | 488 | self.all = all |
|
|
489 | 489 | self.online = online |
|
|
490 | 490 | if not(online): |
|
|
491 | 491 | #Busqueda de archivos offline |
|
|
492 | 492 | self.__searchFilesOffline(path, startDate, endDate, startTime, endTime, walk) |
|
|
493 | 493 | else: |
|
|
494 | 494 | self.__searchFilesOnline(path, walk) |
|
|
495 | 495 | |
|
|
496 | 496 | if not(self.filenameList): |
|
|
497 | 497 | print "There is no files into the folder: %s"%(path) |
|
|
498 | 498 | |
|
|
499 | 499 | sys.exit(-1) |
|
|
500 | 500 | |
|
|
501 | 501 | self.__getExpParameters() |
|
|
502 | 502 | |
|
|
503 | 503 | self.fileIndex = -1 |
|
|
504 | 504 | |
|
|
505 | 505 | self.__setNextFile(online) |
|
|
506 | 506 | |
|
|
507 | 507 | # first_beamcode = self.radacHeaderObj.beamCodeByPulse[0,0] |
|
|
508 | 508 | # index = numpy.where(self.radacHeaderObj.beamCodeByPulse[0,:]!=first_beamcode)[0][0] |
|
|
509 | 509 | self.profileIndex_offset = self.radacHeaderObj.pulseCount[0,:][0] |
|
|
510 | 510 | self.profileIndex = self.profileIndex_offset |
|
|
511 | 511 | |
|
|
512 | 512 | def readRanges(self): |
|
|
513 | 513 | dataset = self.amisrFilePointer.get('Raw11/Data/Samples/Range') |
|
|
514 | 514 | |
|
|
515 | 515 | self.rangeFromFile = numpy.reshape(dataset.value,(-1)) |
|
|
516 | 516 | return self.rangeFromFile |
|
|
517 | 517 | |
|
|
518 | 518 | |
|
|
519 | 519 | def readRadacTime(self,idrecord, range1, range2): |
|
|
520 | 520 | self.radacTimeFromFile = self.radacHeaderObj.radacTime.value |
|
|
521 | 521 | |
|
|
522 | 522 | radacTimeByFrame = numpy.zeros((self.radacHeaderObj.npulses)) |
|
|
523 | 523 | #radacTimeByFrame = dataset[idrecord - 1,range1] |
|
|
524 | 524 | #radacTimeByFrame = dataset[idrecord,range2] |
|
|
525 | 525 | |
|
|
526 | 526 | return radacTimeByFrame |
|
|
527 | 527 | |
|
|
528 | 528 | def readBeamCode(self, idrecord, range1, range2): |
|
|
529 | 529 | dataset = self.amisrFilePointer.get('Raw11/Data/RadacHeader/BeamCode') |
|
|
530 | 530 | beamcodeByFrame = numpy.zeros((self.radacHeaderObj.npulses)) |
|
|
531 | 531 | self.beamCodesFromFile = dataset.value |
|
|
532 | 532 | |
|
|
533 | 533 | #beamcodeByFrame[range1] = dataset[idrecord - 1, range1] |
|
|
534 | 534 | #beamcodeByFrame[range2] = dataset[idrecord, range2] |
|
|
535 | 535 | beamcodeByFrame[range1] = dataset[idrecord, range1] |
|
|
536 | 536 | beamcodeByFrame[range2] = dataset[idrecord, range2] |
|
|
537 | 537 | |
|
|
538 | 538 | return beamcodeByFrame |
|
|
539 | 539 | |
|
|
540 | 540 | |
|
|
541 | 541 | def __setDataByFrame(self): |
|
|
542 | 542 | ndata = 2 # porque es complejo |
|
|
543 | 543 | dataByFrame = numpy.zeros((self.radacHeaderObj.npulses, self.radacHeaderObj.nsamples, ndata)) |
|
|
544 | 544 | return dataByFrame |
|
|
545 | 545 | |
|
|
546 | 546 | def __readDataSet(self): |
|
|
547 | 547 | dataset = self.amisrFilePointer.get('Raw11/Data/Samples/Data') |
|
|
548 | 548 | return dataset |
|
|
549 | 549 | |
|
|
550 | 550 | def __setDataBlock(self,): |
|
|
551 | 551 | real = self.dataByFrame[:,:,0] #asumo que 0 es real |
|
|
552 | 552 | imag = self.dataByFrame[:,:,1] #asumo que 1 es imaginario |
|
|
553 | 553 | datablock = real + imag*1j #armo el complejo |
|
|
554 | 554 | return datablock |
|
|
555 | 555 | |
|
|
556 | 556 | def readSamples_version1(self,idrecord): |
|
|
557 | 557 | #estas tres primeras lineas solo se deben ejecutar una vez |
|
|
558 | 558 | if self.flagIsNewFile: |
|
|
559 | 559 | #reading dataset |
|
|
560 | 560 | self.dataset = self.__readDataSet() |
|
|
561 | 561 | self.flagIsNewFile = 0 |
|
|
562 | 562 | |
|
|
563 | 563 | if idrecord == 0: |
|
|
564 | 564 | self.dataByFrame[self.index4_schain_datablock, : ,:] = self.dataset[0, self.index_amisr_sample,:,:] |
|
|
565 | 565 | self.radacTimeByFrame[self.index4_schain_datablock] = self.radacHeaderObj.radacTime[0, self.index_amisr_sample] |
|
|
566 | 566 | datablock = self.__setDataBlock() |
|
|
567 | 567 | if len(self.index_amisr_buffer) > 0: |
|
|
568 | 568 | self.buffer = self.dataset[0, self.index_amisr_buffer,:,:] |
|
|
569 | 569 | self.buffer_radactime = self.radacHeaderObj.radacTime[0, self.index_amisr_buffer] |
|
|
570 | 570 | |
|
|
571 | 571 | return datablock |
|
|
572 | 572 | if len(self.index_amisr_buffer) > 0: |
|
|
573 | 573 | self.dataByFrame[self.index4_buffer,:,:] = self.buffer.copy() |
|
|
574 | 574 | self.radacTimeByFrame[self.index4_buffer] = self.buffer_radactime.copy() |
|
|
575 | 575 | self.dataByFrame[self.index4_schain_datablock,:,:] = self.dataset[idrecord, self.index_amisr_sample,:,:] |
|
|
576 | 576 | self.radacTimeByFrame[self.index4_schain_datablock] = self.radacHeaderObj.radacTime[idrecord, self.index_amisr_sample] |
|
|
577 | 577 | datablock = self.__setDataBlock() |
|
|
578 | 578 | if len(self.index_amisr_buffer) > 0: |
|
|
579 | 579 | self.buffer = self.dataset[idrecord, self.index_amisr_buffer, :, :] |
|
|
580 | 580 | self.buffer_radactime = self.radacHeaderObj.radacTime[idrecord, self.index_amisr_buffer] |
|
|
581 | 581 | |
|
|
582 | 582 | return datablock |
|
|
583 | 583 | |
|
|
584 | 584 | |
|
|
585 | 585 | def readSamples(self,idrecord): |
|
|
586 | 586 | if self.flagIsNewFile: |
|
|
587 | 587 | self.dataByFrame = self.__setDataByFrame() |
|
|
588 | 588 | self.beamCodeByFrame = self.amisrFilePointer.get('Raw11/Data/RadacHeader/BeamCode').value[idrecord, :] |
|
|
589 | 589 | |
|
|
590 | 590 | #reading ranges |
|
|
591 | 591 | self.readRanges() |
|
|
592 | 592 | #reading dataset |
|
|
593 | 593 | self.dataset = self.__readDataSet() |
|
|
594 | 594 | |
|
|
595 | 595 | self.flagIsNewFile = 0 |
|
|
596 | 596 | self.radacTimeByFrame = self.radacHeaderObj.radacTime.value[idrecord, :] |
|
|
597 | 597 | self.dataByFrame = self.dataset[idrecord, :, :, :] |
|
|
598 | 598 | datablock = self.__setDataBlock() |
|
|
599 | 599 | return datablock |
|
|
600 | 600 | |
|
|
601 | 601 | |
|
|
602 | 602 | def readDataBlock(self): |
|
|
603 | 603 | |
|
|
604 | 604 | self.datablock = self.readSamples_version1(self.idrecord_count) |
|
|
605 | 605 | #self.datablock = self.readSamples(self.idrecord_count) |
|
|
606 | 606 | #print 'record:', self.idrecord_count |
|
|
607 | 607 | |
|
|
608 | 608 | self.idrecord_count += 1 |
|
|
609 | 609 | self.profileIndex = 0 |
|
|
610 | 610 | |
|
|
611 | 611 | if self.idrecord_count >= self.radacHeaderObj.nrecords: |
|
|
612 | 612 | self.idrecord_count = 0 |
|
|
613 | 613 | self.flagIsNewFile = 1 |
|
|
614 | 614 | |
|
|
615 | 615 | def readNextBlock(self): |
|
|
616 | 616 | |
|
|
617 | 617 | self.readDataBlock() |
|
|
618 | 618 | |
|
|
619 | 619 | if self.flagIsNewFile: |
|
|
620 | 620 | self.__setNextFile(self.online) |
|
|
621 | 621 | pass |
|
|
622 | 622 | |
|
|
623 | 623 | def __hasNotDataInBuffer(self): |
|
|
624 | 624 | #self.radacHeaderObj.npulses debe ser otra variable para considerar el numero de pulsos a tomar en el primer y ultimo record |
|
|
625 | 625 | if self.profileIndex >= self.radacHeaderObj.npulses: |
|
|
626 | 626 | return 1 |
|
|
627 | 627 | return 0 |
|
|
628 | 628 | |
|
|
629 | 629 | def printUTC(self): |
|
|
630 | 630 | print self.dataOut.utctime |
|
|
631 | 631 | print '' |
|
|
632 | 632 | |
|
|
633 | 633 | def setObjProperties(self): |
|
|
634 | ||
|
|
634 | 635 | self.dataOut.heightList = self.rangeFromFile/1000.0 #km |
|
|
635 | 636 | self.dataOut.nProfiles = self.radacHeaderObj.npulses |
|
|
636 | 637 | self.dataOut.nRecords = self.radacHeaderObj.nrecords |
|
|
637 | 638 | self.dataOut.nBeams = self.radacHeaderObj.nbeams |
|
|
638 | 639 | self.dataOut.ippSeconds = self.ippSeconds_fromfile |
|
|
639 | self.dataOut.timeInterval = self.dataOut.ippSeconds * self.dataOut.nCohInt | |
|
|
640 | # self.dataOut.timeInterval = self.dataOut.ippSeconds * self.dataOut.nCohInt | |
|
|
640 | 641 | self.dataOut.frequency = self.frequency_h5file |
|
|
641 | 642 | self.dataOut.npulseByFrame = self.npulseByFrame |
|
|
642 | 643 | self.dataOut.nBaud = None |
|
|
643 | 644 | self.dataOut.nCode = None |
|
|
644 | 645 | self.dataOut.code = None |
|
|
645 | 646 | |
|
|
646 | 647 | self.dataOut.beamCodeDict = self.beamCodeDict |
|
|
647 | 648 | self.dataOut.beamRangeDict = self.beamRangeDict |
|
|
648 | 649 | |
|
|
649 | 650 | if self.timezone == 'lt': |
|
|
650 | 651 | self.dataOut.timeZone = time.timezone / 60. #get the timezone in minutes |
|
|
651 | 652 | else: |
|
|
652 | 653 | self.dataOut.timeZone = 0 #by default time is UTC |
|
|
653 | 654 | |
|
|
654 | 655 | def getData(self): |
|
|
655 | 656 | |
|
|
656 | 657 | if self.flagNoMoreFiles: |
|
|
657 | 658 | self.dataOut.flagNoData = True |
|
|
658 | 659 | print 'Process finished' |
|
|
659 | 660 | return 0 |
|
|
660 | 661 | |
|
|
661 | 662 | if self.__hasNotDataInBuffer(): |
|
|
662 | 663 | self.readNextBlock() |
|
|
663 | 664 | |
|
|
664 | 665 | |
|
|
665 | 666 | if self.datablock == None: # setear esta condicion cuando no hayan datos por leers |
|
|
666 | 667 | self.dataOut.flagNoData = True |
|
|
667 | 668 | return 0 |
|
|
668 | 669 | |
|
|
669 | 670 | self.dataOut.data = numpy.reshape(self.datablock[self.profileIndex,:],(1,-1)) |
|
|
670 | 671 | |
|
|
671 | 672 | self.dataOut.utctime = self.radacTimeByFrame[self.profileIndex] |
|
|
672 | 673 | self.dataOut.profileIndex = self.profileIndex |
|
|
673 | 674 | self.dataOut.flagNoData = False |
|
|
674 | 675 | |
|
|
675 | 676 | self.profileIndex += 1 |
|
|
676 | 677 | |
|
|
677 | 678 | return self.dataOut.data |
|
|
678 | 679 | |
|
|
679 | 680 | |
|
|
680 | 681 | def run(self, **kwargs): |
|
|
681 | 682 | if not(self.isConfig): |
|
|
682 | 683 | self.setup(**kwargs) |
|
|
683 | 684 | self.setObjProperties() |
|
|
684 | 685 | self.isConfig = True |
|
|
685 | 686 | |
|
|
686 | 687 | self.getData() |
| @@ -1,1337 +1,1338 | |||
|
|
1 | 1 | ''' |
|
|
2 | 2 | |
|
|
3 | 3 | ''' |
|
|
4 | 4 | import os |
|
|
5 | 5 | import sys |
|
|
6 | 6 | import glob |
|
|
7 | 7 | import time |
|
|
8 | 8 | import numpy |
|
|
9 | 9 | import fnmatch |
|
|
10 | 10 | import time, datetime |
|
|
11 | 11 | #import h5py |
|
|
12 | 12 | import traceback |
|
|
13 | 13 | |
|
|
14 | 14 | #try: |
|
|
15 | 15 | # import pyfits |
|
|
16 | 16 | #except: |
|
|
17 | 17 | # print "pyfits module has not been imported, it should be installed to save files in fits format" |
|
|
18 | 18 | |
|
|
19 | 19 | #from jrodata import * |
|
|
20 | 20 | #from jroheaderIO import * |
|
|
21 | 21 | #from jroprocessing import * |
|
|
22 | 22 | |
|
|
23 | 23 | #import re |
|
|
24 | 24 | #from xml.etree.ElementTree import Element, SubElement, ElementTree |
|
|
25 | 25 | |
|
|
26 | 26 | |
|
|
27 | 27 | LOCALTIME = True #-18000 |
|
|
28 | 28 | |
|
|
29 | 29 | from model.data.jroheaderIO import PROCFLAG, BasicHeader, SystemHeader, RadarControllerHeader, ProcessingHeader |
|
|
30 | 30 | |
|
|
31 | 31 | def isNumber(str): |
|
|
32 | 32 | """ |
|
|
33 | 33 | Chequea si el conjunto de caracteres que componen un string puede ser convertidos a un numero. |
|
|
34 | 34 | |
|
|
35 | 35 | Excepciones: |
|
|
36 | 36 | Si un determinado string no puede ser convertido a numero |
|
|
37 | 37 | Input: |
|
|
38 | 38 | str, string al cual se le analiza para determinar si convertible a un numero o no |
|
|
39 | 39 | |
|
|
40 | 40 | Return: |
|
|
41 | 41 | True : si el string es uno numerico |
|
|
42 | 42 | False : no es un string numerico |
|
|
43 | 43 | """ |
|
|
44 | 44 | try: |
|
|
45 | 45 | float( str ) |
|
|
46 | 46 | return True |
|
|
47 | 47 | except: |
|
|
48 | 48 | return False |
|
|
49 | 49 | |
|
|
50 | 50 | def isThisFileinRange(filename, startUTSeconds, endUTSeconds): |
|
|
51 | 51 | """ |
|
|
52 | 52 | Esta funcion determina si un archivo de datos se encuentra o no dentro del rango de fecha especificado. |
|
|
53 | 53 | |
|
|
54 | 54 | Inputs: |
|
|
55 | 55 | filename : nombre completo del archivo de datos en formato Jicamarca (.r) |
|
|
56 | 56 | |
|
|
57 | 57 | startUTSeconds : fecha inicial del rango seleccionado. La fecha esta dada en |
|
|
58 | 58 | segundos contados desde 01/01/1970. |
|
|
59 | 59 | endUTSeconds : fecha final del rango seleccionado. La fecha esta dada en |
|
|
60 | 60 | segundos contados desde 01/01/1970. |
|
|
61 | 61 | |
|
|
62 | 62 | Return: |
|
|
63 | 63 | Boolean : Retorna True si el archivo de datos contiene datos en el rango de |
|
|
64 | 64 | fecha especificado, de lo contrario retorna False. |
|
|
65 | 65 | |
|
|
66 | 66 | Excepciones: |
|
|
67 | 67 | Si el archivo no existe o no puede ser abierto |
|
|
68 | 68 | Si la cabecera no puede ser leida. |
|
|
69 | 69 | |
|
|
70 | 70 | """ |
|
|
71 | 71 | basicHeaderObj = BasicHeader(LOCALTIME) |
|
|
72 | 72 | |
|
|
73 | 73 | try: |
|
|
74 | 74 | fp = open(filename,'rb') |
|
|
75 | 75 | except IOError: |
|
|
76 | 76 | traceback.print_exc() |
|
|
77 | 77 | raise IOError, "The file %s can't be opened" %(filename) |
|
|
78 | 78 | |
|
|
79 | 79 | sts = basicHeaderObj.read(fp) |
|
|
80 | 80 | fp.close() |
|
|
81 | 81 | |
|
|
82 | 82 | if not(sts): |
|
|
83 | 83 | print "Skipping the file %s because it has not a valid header" %(filename) |
|
|
84 | 84 | return 0 |
|
|
85 | 85 | |
|
|
86 | 86 | if not ((startUTSeconds <= basicHeaderObj.utc) and (endUTSeconds > basicHeaderObj.utc)): |
|
|
87 | 87 | return 0 |
|
|
88 | 88 | |
|
|
89 | 89 | return 1 |
|
|
90 | 90 | |
|
|
91 | 91 | def isFileinThisTime(filename, startTime, endTime): |
|
|
92 | 92 | """ |
|
|
93 | 93 | Retorna 1 si el archivo de datos se encuentra dentro del rango de horas especificado. |
|
|
94 | 94 | |
|
|
95 | 95 | Inputs: |
|
|
96 | 96 | filename : nombre completo del archivo de datos en formato Jicamarca (.r) |
|
|
97 | 97 | |
|
|
98 | 98 | startTime : tiempo inicial del rango seleccionado en formato datetime.time |
|
|
99 | 99 | |
|
|
100 | 100 | endTime : tiempo final del rango seleccionado en formato datetime.time |
|
|
101 | 101 | |
|
|
102 | 102 | Return: |
|
|
103 | 103 | Boolean : Retorna True si el archivo de datos contiene datos en el rango de |
|
|
104 | 104 | fecha especificado, de lo contrario retorna False. |
|
|
105 | 105 | |
|
|
106 | 106 | Excepciones: |
|
|
107 | 107 | Si el archivo no existe o no puede ser abierto |
|
|
108 | 108 | Si la cabecera no puede ser leida. |
|
|
109 | 109 | |
|
|
110 | 110 | """ |
|
|
111 | 111 | |
|
|
112 | 112 | |
|
|
113 | 113 | try: |
|
|
114 | 114 | fp = open(filename,'rb') |
|
|
115 | 115 | except IOError: |
|
|
116 | 116 | traceback.print_exc() |
|
|
117 | 117 | raise IOError, "The file %s can't be opened" %(filename) |
|
|
118 | 118 | |
|
|
119 | 119 | basicHeaderObj = BasicHeader(LOCALTIME) |
|
|
120 | 120 | sts = basicHeaderObj.read(fp) |
|
|
121 | 121 | fp.close() |
|
|
122 | 122 | |
|
|
123 | 123 | thisDatetime = basicHeaderObj.datatime |
|
|
124 | 124 | thisTime = thisDatetime.time() |
|
|
125 | 125 | |
|
|
126 | 126 | if not(sts): |
|
|
127 | 127 | print "Skipping the file %s because it has not a valid header" %(filename) |
|
|
128 | 128 | return None |
|
|
129 | 129 | |
|
|
130 | 130 | if not ((startTime <= thisTime) and (endTime > thisTime)): |
|
|
131 | 131 | return None |
|
|
132 | 132 | |
|
|
133 | 133 | return thisDatetime |
|
|
134 | 134 | |
|
|
135 | 135 | def getFileFromSet(path, ext, set): |
|
|
136 | 136 | validFilelist = [] |
|
|
137 | 137 | fileList = os.listdir(path) |
|
|
138 | 138 | |
|
|
139 | 139 | # 0 1234 567 89A BCDE |
|
|
140 | 140 | # H YYYY DDD SSS .ext |
|
|
141 | 141 | |
|
|
142 | 142 | for thisFile in fileList: |
|
|
143 | 143 | try: |
|
|
144 | 144 | year = int(thisFile[1:5]) |
|
|
145 | 145 | doy = int(thisFile[5:8]) |
|
|
146 | 146 | except: |
|
|
147 | 147 | continue |
|
|
148 | 148 | |
|
|
149 | 149 | if (os.path.splitext(thisFile)[-1].lower() != ext.lower()): |
|
|
150 | 150 | continue |
|
|
151 | 151 | |
|
|
152 | 152 | validFilelist.append(thisFile) |
|
|
153 | 153 | |
|
|
154 | 154 | myfile = fnmatch.filter(validFilelist,'*%4.4d%3.3d%3.3d*'%(year,doy,set)) |
|
|
155 | 155 | |
|
|
156 | 156 | if len(myfile)!= 0: |
|
|
157 | 157 | return myfile[0] |
|
|
158 | 158 | else: |
|
|
159 | 159 | filename = '*%4.4d%3.3d%3.3d%s'%(year,doy,set,ext.lower()) |
|
|
160 | 160 | print 'the filename %s does not exist'%filename |
|
|
161 | 161 | print '...going to the last file: ' |
|
|
162 | 162 | |
|
|
163 | 163 | if validFilelist: |
|
|
164 | 164 | validFilelist = sorted( validFilelist, key=str.lower ) |
|
|
165 | 165 | return validFilelist[-1] |
|
|
166 | 166 | |
|
|
167 | 167 | return None |
|
|
168 | 168 | |
|
|
169 | 169 | def getlastFileFromPath(path, ext): |
|
|
170 | 170 | """ |
|
|
171 | 171 | Depura el fileList dejando solo los que cumplan el formato de "PYYYYDDDSSS.ext" |
|
|
172 | 172 | al final de la depuracion devuelve el ultimo file de la lista que quedo. |
|
|
173 | 173 | |
|
|
174 | 174 | Input: |
|
|
175 | 175 | fileList : lista conteniendo todos los files (sin path) que componen una determinada carpeta |
|
|
176 | 176 | ext : extension de los files contenidos en una carpeta |
|
|
177 | 177 | |
|
|
178 | 178 | Return: |
|
|
179 | 179 | El ultimo file de una determinada carpeta, no se considera el path. |
|
|
180 | 180 | """ |
|
|
181 | 181 | validFilelist = [] |
|
|
182 | 182 | fileList = os.listdir(path) |
|
|
183 | 183 | |
|
|
184 | 184 | # 0 1234 567 89A BCDE |
|
|
185 | 185 | # H YYYY DDD SSS .ext |
|
|
186 | 186 | |
|
|
187 | 187 | for thisFile in fileList: |
|
|
188 | 188 | |
|
|
189 | 189 | year = thisFile[1:5] |
|
|
190 | 190 | if not isNumber(year): |
|
|
191 | 191 | continue |
|
|
192 | 192 | |
|
|
193 | 193 | doy = thisFile[5:8] |
|
|
194 | 194 | if not isNumber(doy): |
|
|
195 | 195 | continue |
|
|
196 | 196 | |
|
|
197 | 197 | year = int(year) |
|
|
198 | 198 | doy = int(doy) |
|
|
199 | 199 | |
|
|
200 | 200 | if (os.path.splitext(thisFile)[-1].lower() != ext.lower()): |
|
|
201 | 201 | continue |
|
|
202 | 202 | |
|
|
203 | 203 | validFilelist.append(thisFile) |
|
|
204 | 204 | |
|
|
205 | 205 | if validFilelist: |
|
|
206 | 206 | validFilelist = sorted( validFilelist, key=str.lower ) |
|
|
207 | 207 | return validFilelist[-1] |
|
|
208 | 208 | |
|
|
209 | 209 | return None |
|
|
210 | 210 | |
|
|
211 | 211 | def checkForRealPath(path, foldercounter, year, doy, set, ext): |
|
|
212 | 212 | """ |
|
|
213 | 213 | Por ser Linux Case Sensitive entonces checkForRealPath encuentra el nombre correcto de un path, |
|
|
214 | 214 | Prueba por varias combinaciones de nombres entre mayusculas y minusculas para determinar |
|
|
215 | 215 | el path exacto de un determinado file. |
|
|
216 | 216 | |
|
|
217 | 217 | Example : |
|
|
218 | 218 | nombre correcto del file es .../.../D2009307/P2009307367.ext |
|
|
219 | 219 | |
|
|
220 | 220 | Entonces la funcion prueba con las siguientes combinaciones |
|
|
221 | 221 | .../.../y2009307367.ext |
|
|
222 | 222 | .../.../Y2009307367.ext |
|
|
223 | 223 | .../.../x2009307/y2009307367.ext |
|
|
224 | 224 | .../.../x2009307/Y2009307367.ext |
|
|
225 | 225 | .../.../X2009307/y2009307367.ext |
|
|
226 | 226 | .../.../X2009307/Y2009307367.ext |
|
|
227 | 227 | siendo para este caso, la ultima combinacion de letras, identica al file buscado |
|
|
228 | 228 | |
|
|
229 | 229 | Return: |
|
|
230 | 230 | Si encuentra la cobinacion adecuada devuelve el path completo y el nombre del file |
|
|
231 | 231 | caso contrario devuelve None como path y el la ultima combinacion de nombre en mayusculas |
|
|
232 | 232 | para el filename |
|
|
233 | 233 | """ |
|
|
234 | 234 | fullfilename = None |
|
|
235 | 235 | find_flag = False |
|
|
236 | 236 | filename = None |
|
|
237 | 237 | |
|
|
238 | 238 | prefixDirList = [None,'d','D'] |
|
|
239 | 239 | if ext.lower() == ".r": #voltage |
|
|
240 | 240 | prefixFileList = ['d','D'] |
|
|
241 | 241 | elif ext.lower() == ".pdata": #spectra |
|
|
242 | 242 | prefixFileList = ['p','P'] |
|
|
243 | 243 | else: |
|
|
244 | 244 | return None, filename |
|
|
245 | 245 | |
|
|
246 | 246 | #barrido por las combinaciones posibles |
|
|
247 | 247 | for prefixDir in prefixDirList: |
|
|
248 | 248 | thispath = path |
|
|
249 | 249 | if prefixDir != None: |
|
|
250 | 250 | #formo el nombre del directorio xYYYYDDD (x=d o x=D) |
|
|
251 | 251 | if foldercounter == 0: |
|
|
252 | 252 | thispath = os.path.join(path, "%s%04d%03d" % ( prefixDir, year, doy )) |
|
|
253 | 253 | else: |
|
|
254 | 254 | thispath = os.path.join(path, "%s%04d%03d_%02d" % ( prefixDir, year, doy , foldercounter)) |
|
|
255 | 255 | for prefixFile in prefixFileList: #barrido por las dos combinaciones posibles de "D" |
|
|
256 | 256 | filename = "%s%04d%03d%03d%s" % ( prefixFile, year, doy, set, ext ) #formo el nombre del file xYYYYDDDSSS.ext |
|
|
257 | 257 | fullfilename = os.path.join( thispath, filename ) #formo el path completo |
|
|
258 | 258 | |
|
|
259 | 259 | if os.path.exists( fullfilename ): #verifico que exista |
|
|
260 | 260 | find_flag = True |
|
|
261 | 261 | break |
|
|
262 | 262 | if find_flag: |
|
|
263 | 263 | break |
|
|
264 | 264 | |
|
|
265 | 265 | if not(find_flag): |
|
|
266 | 266 | return None, filename |
|
|
267 | 267 | |
|
|
268 | 268 | return fullfilename, filename |
|
|
269 | 269 | |
|
|
270 | 270 | def isDoyFolder(folder): |
|
|
271 | 271 | try: |
|
|
272 | 272 | year = int(folder[1:5]) |
|
|
273 | 273 | except: |
|
|
274 | 274 | return 0 |
|
|
275 | 275 | |
|
|
276 | 276 | try: |
|
|
277 | 277 | doy = int(folder[5:8]) |
|
|
278 | 278 | except: |
|
|
279 | 279 | return 0 |
|
|
280 | 280 | |
|
|
281 | 281 | return 1 |
|
|
282 | 282 | |
|
|
283 | 283 | class JRODataIO: |
|
|
284 | 284 | |
|
|
285 | 285 | c = 3E8 |
|
|
286 | 286 | |
|
|
287 | 287 | isConfig = False |
|
|
288 | 288 | |
|
|
289 | 289 | basicHeaderObj = None |
|
|
290 | 290 | |
|
|
291 | 291 | systemHeaderObj = None |
|
|
292 | 292 | |
|
|
293 | 293 | radarControllerHeaderObj = None |
|
|
294 | 294 | |
|
|
295 | 295 | processingHeaderObj = None |
|
|
296 | 296 | |
|
|
297 | 297 | online = 0 |
|
|
298 | 298 | |
|
|
299 | 299 | dtype = None |
|
|
300 | 300 | |
|
|
301 | 301 | pathList = [] |
|
|
302 | 302 | |
|
|
303 | 303 | filenameList = [] |
|
|
304 | 304 | |
|
|
305 | 305 | filename = None |
|
|
306 | 306 | |
|
|
307 | 307 | ext = None |
|
|
308 | 308 | |
|
|
309 | 309 | flagIsNewFile = 1 |
|
|
310 | 310 | |
|
|
311 | 311 | flagTimeBlock = 0 |
|
|
312 | 312 | |
|
|
313 | 313 | flagIsNewBlock = 0 |
|
|
314 | 314 | |
|
|
315 | 315 | fp = None |
|
|
316 | 316 | |
|
|
317 | 317 | firstHeaderSize = 0 |
|
|
318 | 318 | |
|
|
319 | 319 | basicHeaderSize = 24 |
|
|
320 | 320 | |
|
|
321 | 321 | versionFile = 1103 |
|
|
322 | 322 | |
|
|
323 | 323 | fileSize = None |
|
|
324 | 324 | |
|
|
325 | 325 | # ippSeconds = None |
|
|
326 | 326 | |
|
|
327 | 327 | fileSizeByHeader = None |
|
|
328 | 328 | |
|
|
329 | 329 | fileIndex = None |
|
|
330 | 330 | |
|
|
331 | 331 | profileIndex = None |
|
|
332 | 332 | |
|
|
333 | 333 | blockIndex = None |
|
|
334 | 334 | |
|
|
335 | 335 | nTotalBlocks = None |
|
|
336 | 336 | |
|
|
337 | 337 | maxTimeStep = 30 |
|
|
338 | 338 | |
|
|
339 | 339 | lastUTTime = None |
|
|
340 | 340 | |
|
|
341 | 341 | datablock = None |
|
|
342 | 342 | |
|
|
343 | 343 | dataOut = None |
|
|
344 | 344 | |
|
|
345 | 345 | blocksize = None |
|
|
346 | 346 | |
|
|
347 |
get |
|
|
|
347 | getByBlock = False | |
|
|
348 | 348 | |
|
|
349 | 349 | def __init__(self): |
|
|
350 | 350 | |
|
|
351 | 351 | raise ValueError, "Not implemented" |
|
|
352 | 352 | |
|
|
353 | 353 | def run(self): |
|
|
354 | 354 | |
|
|
355 | 355 | raise ValueError, "Not implemented" |
|
|
356 | 356 | |
|
|
357 | 357 | class JRODataReader(JRODataIO): |
|
|
358 | 358 | |
|
|
359 | 359 | nReadBlocks = 0 |
|
|
360 | 360 | |
|
|
361 | 361 | delay = 10 #number of seconds waiting a new file |
|
|
362 | 362 | |
|
|
363 | 363 | nTries = 3 #quantity tries |
|
|
364 | 364 | |
|
|
365 | 365 | nFiles = 3 #number of files for searching |
|
|
366 | 366 | |
|
|
367 | 367 | path = None |
|
|
368 | 368 | |
|
|
369 | 369 | foldercounter = 0 |
|
|
370 | 370 | |
|
|
371 | 371 | flagNoMoreFiles = 0 |
|
|
372 | 372 | |
|
|
373 | 373 | datetimeList = [] |
|
|
374 | 374 | |
|
|
375 | 375 | __isFirstTimeOnline = 1 |
|
|
376 | 376 | |
|
|
377 | 377 | __printInfo = True |
|
|
378 | 378 | |
|
|
379 | 379 | profileIndex = None |
|
|
380 | 380 | |
|
|
381 | 381 | def __init__(self): |
|
|
382 | 382 | |
|
|
383 | 383 | """ |
|
|
384 | 384 | |
|
|
385 | 385 | """ |
|
|
386 | 386 | |
|
|
387 | 387 | raise ValueError, "This method has not been implemented" |
|
|
388 | 388 | |
|
|
389 | 389 | |
|
|
390 | 390 | def createObjByDefault(self): |
|
|
391 | 391 | """ |
|
|
392 | 392 | |
|
|
393 | 393 | """ |
|
|
394 | 394 | raise ValueError, "This method has not been implemented" |
|
|
395 | 395 | |
|
|
396 | 396 | def getBlockDimension(self): |
|
|
397 | 397 | |
|
|
398 | 398 | raise ValueError, "No implemented" |
|
|
399 | 399 | |
|
|
400 | 400 | def __searchFilesOffLine(self, |
|
|
401 | 401 | path, |
|
|
402 | 402 | startDate, |
|
|
403 | 403 | endDate, |
|
|
404 | 404 | startTime=datetime.time(0,0,0), |
|
|
405 | 405 | endTime=datetime.time(23,59,59), |
|
|
406 | 406 | set=None, |
|
|
407 | 407 | expLabel='', |
|
|
408 | 408 | ext='.r', |
|
|
409 | 409 | walk=True): |
|
|
410 | 410 | |
|
|
411 | 411 | pathList = [] |
|
|
412 | 412 | |
|
|
413 | 413 | if not walk: |
|
|
414 | 414 | #pathList.append(path) |
|
|
415 | 415 | multi_path = path.split(',') |
|
|
416 | 416 | for single_path in multi_path: |
|
|
417 | 417 | pathList.append(single_path) |
|
|
418 | 418 | |
|
|
419 | 419 | else: |
|
|
420 | 420 | #dirList = [] |
|
|
421 | 421 | multi_path = path.split(',') |
|
|
422 | 422 | for single_path in multi_path: |
|
|
423 | 423 | dirList = [] |
|
|
424 | 424 | for thisPath in os.listdir(single_path): |
|
|
425 | 425 | if not os.path.isdir(os.path.join(single_path,thisPath)): |
|
|
426 | 426 | continue |
|
|
427 | 427 | if not isDoyFolder(thisPath): |
|
|
428 | 428 | continue |
|
|
429 | 429 | |
|
|
430 | 430 | dirList.append(thisPath) |
|
|
431 | 431 | |
|
|
432 | 432 | if not(dirList): |
|
|
433 | 433 | return None, None |
|
|
434 | 434 | |
|
|
435 | 435 | thisDate = startDate |
|
|
436 | 436 | |
|
|
437 | 437 | while(thisDate <= endDate): |
|
|
438 | 438 | year = thisDate.timetuple().tm_year |
|
|
439 | 439 | doy = thisDate.timetuple().tm_yday |
|
|
440 | 440 | |
|
|
441 | 441 | matchlist = fnmatch.filter(dirList, '?' + '%4.4d%3.3d' % (year,doy) + '*') |
|
|
442 | 442 | if len(matchlist) == 0: |
|
|
443 | 443 | thisDate += datetime.timedelta(1) |
|
|
444 | 444 | continue |
|
|
445 | 445 | for match in matchlist: |
|
|
446 | 446 | pathList.append(os.path.join(single_path,match,expLabel)) |
|
|
447 | 447 | |
|
|
448 | 448 | thisDate += datetime.timedelta(1) |
|
|
449 | 449 | |
|
|
450 | 450 | if pathList == []: |
|
|
451 | 451 | print "Any folder was found for the date range: %s-%s" %(startDate, endDate) |
|
|
452 | 452 | return None, None |
|
|
453 | 453 | |
|
|
454 | 454 | print "%d folder(s) was(were) found for the date range: %s - %s" %(len(pathList), startDate, endDate) |
|
|
455 | 455 | |
|
|
456 | 456 | filenameList = [] |
|
|
457 | 457 | datetimeList = [] |
|
|
458 | 458 | pathDict = {} |
|
|
459 | 459 | filenameList_to_sort = [] |
|
|
460 | 460 | |
|
|
461 | 461 | for i in range(len(pathList)): |
|
|
462 | 462 | |
|
|
463 | 463 | thisPath = pathList[i] |
|
|
464 | 464 | |
|
|
465 | 465 | fileList = glob.glob1(thisPath, "*%s" %ext) |
|
|
466 | 466 | fileList.sort() |
|
|
467 | 467 | pathDict.setdefault(fileList[0]) |
|
|
468 | 468 | pathDict[fileList[0]] = i |
|
|
469 | 469 | filenameList_to_sort.append(fileList[0]) |
|
|
470 | 470 | |
|
|
471 | 471 | filenameList_to_sort.sort() |
|
|
472 | 472 | |
|
|
473 | 473 | for file in filenameList_to_sort: |
|
|
474 | 474 | thisPath = pathList[pathDict[file]] |
|
|
475 | 475 | |
|
|
476 | 476 | fileList = glob.glob1(thisPath, "*%s" %ext) |
|
|
477 | 477 | fileList.sort() |
|
|
478 | 478 | |
|
|
479 | 479 | for file in fileList: |
|
|
480 | 480 | |
|
|
481 | 481 | filename = os.path.join(thisPath,file) |
|
|
482 | 482 | thisDatetime = isFileinThisTime(filename, startTime, endTime) |
|
|
483 | 483 | |
|
|
484 | 484 | if not(thisDatetime): |
|
|
485 | 485 | continue |
|
|
486 | 486 | |
|
|
487 | 487 | filenameList.append(filename) |
|
|
488 | 488 | datetimeList.append(thisDatetime) |
|
|
489 | 489 | |
|
|
490 | 490 | if not(filenameList): |
|
|
491 | 491 | print "Any file was found for the time range %s - %s" %(startTime, endTime) |
|
|
492 | 492 | return None, None |
|
|
493 | 493 | |
|
|
494 | 494 | print "%d file(s) was(were) found for the time range: %s - %s" %(len(filenameList), startTime, endTime) |
|
|
495 | 495 | |
|
|
496 | 496 | |
|
|
497 | 497 | for i in range(len(filenameList)): |
|
|
498 | 498 | print "%s -> [%s]" %(filenameList[i], datetimeList[i].ctime()) |
|
|
499 | 499 | |
|
|
500 | 500 | self.filenameList = filenameList |
|
|
501 | 501 | self.datetimeList = datetimeList |
|
|
502 | 502 | |
|
|
503 | 503 | return pathList, filenameList |
|
|
504 | 504 | |
|
|
505 | 505 | def __searchFilesOnLine(self, path, expLabel = "", ext = None, walk=True, set=None): |
|
|
506 | 506 | |
|
|
507 | 507 | """ |
|
|
508 | 508 | Busca el ultimo archivo de la ultima carpeta (determinada o no por startDateTime) y |
|
|
509 | 509 | devuelve el archivo encontrado ademas de otros datos. |
|
|
510 | 510 | |
|
|
511 | 511 | Input: |
|
|
512 | 512 | path : carpeta donde estan contenidos los files que contiene data |
|
|
513 | 513 | |
|
|
514 | 514 | expLabel : Nombre del subexperimento (subfolder) |
|
|
515 | 515 | |
|
|
516 | 516 | ext : extension de los files |
|
|
517 | 517 | |
|
|
518 | 518 | walk : Si es habilitado no realiza busquedas dentro de los ubdirectorios (doypath) |
|
|
519 | 519 | |
|
|
520 | 520 | Return: |
|
|
521 | 521 | directory : eL directorio donde esta el file encontrado |
|
|
522 | 522 | filename : el ultimo file de una determinada carpeta |
|
|
523 | 523 | year : el anho |
|
|
524 | 524 | doy : el numero de dia del anho |
|
|
525 | 525 | set : el set del archivo |
|
|
526 | 526 | |
|
|
527 | 527 | |
|
|
528 | 528 | """ |
|
|
529 | 529 | dirList = [] |
|
|
530 | 530 | |
|
|
531 | 531 | if not walk: |
|
|
532 | 532 | fullpath = path |
|
|
533 | 533 | foldercounter = 0 |
|
|
534 | 534 | else: |
|
|
535 | 535 | #Filtra solo los directorios |
|
|
536 | 536 | for thisPath in os.listdir(path): |
|
|
537 | 537 | if not os.path.isdir(os.path.join(path,thisPath)): |
|
|
538 | 538 | continue |
|
|
539 | 539 | if not isDoyFolder(thisPath): |
|
|
540 | 540 | continue |
|
|
541 | 541 | |
|
|
542 | 542 | dirList.append(thisPath) |
|
|
543 | 543 | |
|
|
544 | 544 | if not(dirList): |
|
|
545 | 545 | return None, None, None, None, None, None |
|
|
546 | 546 | |
|
|
547 | 547 | dirList = sorted( dirList, key=str.lower ) |
|
|
548 | 548 | |
|
|
549 | 549 | doypath = dirList[-1] |
|
|
550 | 550 | foldercounter = int(doypath.split('_')[1]) if len(doypath.split('_'))>1 else 0 |
|
|
551 | 551 | fullpath = os.path.join(path, doypath, expLabel) |
|
|
552 | 552 | |
|
|
553 | 553 | |
|
|
554 | 554 | print "%s folder was found: " %(fullpath ) |
|
|
555 | 555 | |
|
|
556 | 556 | if set == None: |
|
|
557 | 557 | filename = getlastFileFromPath(fullpath, ext) |
|
|
558 | 558 | else: |
|
|
559 | 559 | filename = getFileFromSet(fullpath, ext, set) |
|
|
560 | 560 | |
|
|
561 | 561 | if not(filename): |
|
|
562 | 562 | return None, None, None, None, None, None |
|
|
563 | 563 | |
|
|
564 | 564 | print "%s file was found" %(filename) |
|
|
565 | 565 | |
|
|
566 | 566 | if not(self.__verifyFile(os.path.join(fullpath, filename))): |
|
|
567 | 567 | return None, None, None, None, None, None |
|
|
568 | 568 | |
|
|
569 | 569 | year = int( filename[1:5] ) |
|
|
570 | 570 | doy = int( filename[5:8] ) |
|
|
571 | 571 | set = int( filename[8:11] ) |
|
|
572 | 572 | |
|
|
573 | 573 | return fullpath, foldercounter, filename, year, doy, set |
|
|
574 | 574 | |
|
|
575 | 575 | def __setNextFileOffline(self): |
|
|
576 | 576 | |
|
|
577 | 577 | idFile = self.fileIndex |
|
|
578 | 578 | |
|
|
579 | 579 | while (True): |
|
|
580 | 580 | idFile += 1 |
|
|
581 | 581 | if not(idFile < len(self.filenameList)): |
|
|
582 | 582 | self.flagNoMoreFiles = 1 |
|
|
583 | 583 | print "No more Files" |
|
|
584 | 584 | return 0 |
|
|
585 | 585 | |
|
|
586 | 586 | filename = self.filenameList[idFile] |
|
|
587 | 587 | |
|
|
588 | 588 | if not(self.__verifyFile(filename)): |
|
|
589 | 589 | continue |
|
|
590 | 590 | |
|
|
591 | 591 | fileSize = os.path.getsize(filename) |
|
|
592 | 592 | fp = open(filename,'rb') |
|
|
593 | 593 | break |
|
|
594 | 594 | |
|
|
595 | 595 | self.flagIsNewFile = 1 |
|
|
596 | 596 | self.fileIndex = idFile |
|
|
597 | 597 | self.filename = filename |
|
|
598 | 598 | self.fileSize = fileSize |
|
|
599 | 599 | self.fp = fp |
|
|
600 | 600 | |
|
|
601 | 601 | print "Setting the file: %s"%self.filename |
|
|
602 | 602 | |
|
|
603 | 603 | return 1 |
|
|
604 | 604 | |
|
|
605 | 605 | def __setNextFileOnline(self): |
|
|
606 | 606 | """ |
|
|
607 | 607 | Busca el siguiente file que tenga suficiente data para ser leida, dentro de un folder especifico, si |
|
|
608 | 608 | no encuentra un file valido espera un tiempo determinado y luego busca en los posibles n files |
|
|
609 | 609 | siguientes. |
|
|
610 | 610 | |
|
|
611 | 611 | Affected: |
|
|
612 | 612 | self.flagIsNewFile |
|
|
613 | 613 | self.filename |
|
|
614 | 614 | self.fileSize |
|
|
615 | 615 | self.fp |
|
|
616 | 616 | self.set |
|
|
617 | 617 | self.flagNoMoreFiles |
|
|
618 | 618 | |
|
|
619 | 619 | Return: |
|
|
620 | 620 | 0 : si luego de una busqueda del siguiente file valido este no pudo ser encontrado |
|
|
621 | 621 | 1 : si el file fue abierto con exito y esta listo a ser leido |
|
|
622 | 622 | |
|
|
623 | 623 | Excepciones: |
|
|
624 | 624 | Si un determinado file no puede ser abierto |
|
|
625 | 625 | """ |
|
|
626 | 626 | nFiles = 0 |
|
|
627 | 627 | fileOk_flag = False |
|
|
628 | 628 | firstTime_flag = True |
|
|
629 | 629 | |
|
|
630 | 630 | self.set += 1 |
|
|
631 | 631 | |
|
|
632 | 632 | if self.set > 999: |
|
|
633 | 633 | self.set = 0 |
|
|
634 | 634 | self.foldercounter += 1 |
|
|
635 | 635 | |
|
|
636 | 636 | #busca el 1er file disponible |
|
|
637 | 637 | fullfilename, filename = checkForRealPath( self.path, self.foldercounter, self.year, self.doy, self.set, self.ext ) |
|
|
638 | 638 | if fullfilename: |
|
|
639 | 639 | if self.__verifyFile(fullfilename, False): |
|
|
640 | 640 | fileOk_flag = True |
|
|
641 | 641 | |
|
|
642 | 642 | #si no encuentra un file entonces espera y vuelve a buscar |
|
|
643 | 643 | if not(fileOk_flag): |
|
|
644 | 644 | for nFiles in range(self.nFiles+1): #busco en los siguientes self.nFiles+1 files posibles |
|
|
645 | 645 | |
|
|
646 | 646 | if firstTime_flag: #si es la 1era vez entonces hace el for self.nTries veces |
|
|
647 | 647 | tries = self.nTries |
|
|
648 | 648 | else: |
|
|
649 | 649 | tries = 1 #si no es la 1era vez entonces solo lo hace una vez |
|
|
650 | 650 | |
|
|
651 | 651 | for nTries in range( tries ): |
|
|
652 | 652 | if firstTime_flag: |
|
|
653 | 653 | print "\tWaiting %0.2f sec for the file \"%s\" , try %03d ..." % ( self.delay, filename, nTries+1 ) |
|
|
654 | 654 | time.sleep( self.delay ) |
|
|
655 | 655 | else: |
|
|
656 | 656 | print "\tSearching next \"%s%04d%03d%03d%s\" file ..." % (self.optchar, self.year, self.doy, self.set, self.ext) |
|
|
657 | 657 | |
|
|
658 | 658 | fullfilename, filename = checkForRealPath( self.path, self.foldercounter, self.year, self.doy, self.set, self.ext ) |
|
|
659 | 659 | if fullfilename: |
|
|
660 | 660 | if self.__verifyFile(fullfilename): |
|
|
661 | 661 | fileOk_flag = True |
|
|
662 | 662 | break |
|
|
663 | 663 | |
|
|
664 | 664 | if fileOk_flag: |
|
|
665 | 665 | break |
|
|
666 | 666 | |
|
|
667 | 667 | firstTime_flag = False |
|
|
668 | 668 | |
|
|
669 | 669 | print "\tSkipping the file \"%s\" due to this file doesn't exist" % filename |
|
|
670 | 670 | self.set += 1 |
|
|
671 | 671 | |
|
|
672 | 672 | if nFiles == (self.nFiles-1): #si no encuentro el file buscado cambio de carpeta y busco en la siguiente carpeta |
|
|
673 | 673 | self.set = 0 |
|
|
674 | 674 | self.doy += 1 |
|
|
675 | 675 | self.foldercounter = 0 |
|
|
676 | 676 | |
|
|
677 | 677 | if fileOk_flag: |
|
|
678 | 678 | self.fileSize = os.path.getsize( fullfilename ) |
|
|
679 | 679 | self.filename = fullfilename |
|
|
680 | 680 | self.flagIsNewFile = 1 |
|
|
681 | 681 | if self.fp != None: self.fp.close() |
|
|
682 | 682 | self.fp = open(fullfilename, 'rb') |
|
|
683 | 683 | self.flagNoMoreFiles = 0 |
|
|
684 | 684 | print 'Setting the file: %s' % fullfilename |
|
|
685 | 685 | else: |
|
|
686 | 686 | self.fileSize = 0 |
|
|
687 | 687 | self.filename = None |
|
|
688 | 688 | self.flagIsNewFile = 0 |
|
|
689 | 689 | self.fp = None |
|
|
690 | 690 | self.flagNoMoreFiles = 1 |
|
|
691 | 691 | print 'No more Files' |
|
|
692 | 692 | |
|
|
693 | 693 | return fileOk_flag |
|
|
694 | 694 | |
|
|
695 | 695 | def setNextFile(self): |
|
|
696 | 696 | if self.fp != None: |
|
|
697 | 697 | self.fp.close() |
|
|
698 | 698 | |
|
|
699 | 699 | if self.online: |
|
|
700 | 700 | newFile = self.__setNextFileOnline() |
|
|
701 | 701 | else: |
|
|
702 | 702 | newFile = self.__setNextFileOffline() |
|
|
703 | 703 | |
|
|
704 | 704 | if not(newFile): |
|
|
705 | 705 | return 0 |
|
|
706 | 706 | |
|
|
707 | 707 | self.__readFirstHeader() |
|
|
708 | 708 | self.nReadBlocks = 0 |
|
|
709 | 709 | return 1 |
|
|
710 | 710 | |
|
|
711 | 711 | def __waitNewBlock(self): |
|
|
712 | 712 | """ |
|
|
713 | 713 | Return 1 si se encontro un nuevo bloque de datos, 0 de otra forma. |
|
|
714 | 714 | |
|
|
715 | 715 | Si el modo de lectura es OffLine siempre retorn 0 |
|
|
716 | 716 | """ |
|
|
717 | 717 | if not self.online: |
|
|
718 | 718 | return 0 |
|
|
719 | 719 | |
|
|
720 | 720 | if (self.nReadBlocks >= self.processingHeaderObj.dataBlocksPerFile): |
|
|
721 | 721 | return 0 |
|
|
722 | 722 | |
|
|
723 | 723 | currentPointer = self.fp.tell() |
|
|
724 | 724 | |
|
|
725 | 725 | neededSize = self.processingHeaderObj.blockSize + self.basicHeaderSize |
|
|
726 | 726 | |
|
|
727 | 727 | for nTries in range( self.nTries ): |
|
|
728 | 728 | |
|
|
729 | 729 | self.fp.close() |
|
|
730 | 730 | self.fp = open( self.filename, 'rb' ) |
|
|
731 | 731 | self.fp.seek( currentPointer ) |
|
|
732 | 732 | |
|
|
733 | 733 | self.fileSize = os.path.getsize( self.filename ) |
|
|
734 | 734 | currentSize = self.fileSize - currentPointer |
|
|
735 | 735 | |
|
|
736 | 736 | if ( currentSize >= neededSize ): |
|
|
737 | 737 | self.basicHeaderObj.read(self.fp) |
|
|
738 | 738 | return 1 |
|
|
739 | 739 | |
|
|
740 | 740 | if self.fileSize == self.fileSizeByHeader: |
|
|
741 | 741 | # self.flagEoF = True |
|
|
742 | 742 | return 0 |
|
|
743 | 743 | |
|
|
744 | 744 | print "\tWaiting %0.2f seconds for the next block, try %03d ..." % (self.delay, nTries+1) |
|
|
745 | 745 | time.sleep( self.delay ) |
|
|
746 | 746 | |
|
|
747 | 747 | |
|
|
748 | 748 | return 0 |
|
|
749 | 749 | |
|
|
750 | 750 | def waitDataBlock(self,pointer_location): |
|
|
751 | 751 | |
|
|
752 | 752 | currentPointer = pointer_location |
|
|
753 | 753 | |
|
|
754 | 754 | neededSize = self.processingHeaderObj.blockSize #+ self.basicHeaderSize |
|
|
755 | 755 | |
|
|
756 | 756 | for nTries in range( self.nTries ): |
|
|
757 | 757 | self.fp.close() |
|
|
758 | 758 | self.fp = open( self.filename, 'rb' ) |
|
|
759 | 759 | self.fp.seek( currentPointer ) |
|
|
760 | 760 | |
|
|
761 | 761 | self.fileSize = os.path.getsize( self.filename ) |
|
|
762 | 762 | currentSize = self.fileSize - currentPointer |
|
|
763 | 763 | |
|
|
764 | 764 | if ( currentSize >= neededSize ): |
|
|
765 | 765 | return 1 |
|
|
766 | 766 | |
|
|
767 | 767 | print "\tWaiting %0.2f seconds for the next block, try %03d ..." % (self.delay, nTries+1) |
|
|
768 | 768 | time.sleep( self.delay ) |
|
|
769 | 769 | |
|
|
770 | 770 | return 0 |
|
|
771 | 771 | |
|
|
772 | 772 | def __jumpToLastBlock(self): |
|
|
773 | 773 | |
|
|
774 | 774 | if not(self.__isFirstTimeOnline): |
|
|
775 | 775 | return |
|
|
776 | 776 | |
|
|
777 | 777 | csize = self.fileSize - self.fp.tell() |
|
|
778 | 778 | blocksize = self.processingHeaderObj.blockSize |
|
|
779 | 779 | |
|
|
780 | 780 | #salta el primer bloque de datos |
|
|
781 | 781 | if csize > self.processingHeaderObj.blockSize: |
|
|
782 | 782 | self.fp.seek(self.fp.tell() + blocksize) |
|
|
783 | 783 | else: |
|
|
784 | 784 | return |
|
|
785 | 785 | |
|
|
786 | 786 | csize = self.fileSize - self.fp.tell() |
|
|
787 | 787 | neededsize = self.processingHeaderObj.blockSize + self.basicHeaderSize |
|
|
788 | 788 | while True: |
|
|
789 | 789 | |
|
|
790 | 790 | if self.fp.tell()<self.fileSize: |
|
|
791 | 791 | self.fp.seek(self.fp.tell() + neededsize) |
|
|
792 | 792 | else: |
|
|
793 | 793 | self.fp.seek(self.fp.tell() - neededsize) |
|
|
794 | 794 | break |
|
|
795 | 795 | |
|
|
796 | 796 | # csize = self.fileSize - self.fp.tell() |
|
|
797 | 797 | # neededsize = self.processingHeaderObj.blockSize + self.basicHeaderSize |
|
|
798 | 798 | # factor = int(csize/neededsize) |
|
|
799 | 799 | # if factor > 0: |
|
|
800 | 800 | # self.fp.seek(self.fp.tell() + factor*neededsize) |
|
|
801 | 801 | |
|
|
802 | 802 | self.flagIsNewFile = 0 |
|
|
803 | 803 | self.__isFirstTimeOnline = 0 |
|
|
804 | 804 | |
|
|
805 | 805 | def __setNewBlock(self): |
|
|
806 | 806 | |
|
|
807 | 807 | if self.fp == None: |
|
|
808 | 808 | return 0 |
|
|
809 | 809 | |
|
|
810 | 810 | if self.online: |
|
|
811 | 811 | self.__jumpToLastBlock() |
|
|
812 | 812 | |
|
|
813 | 813 | if self.flagIsNewFile: |
|
|
814 | 814 | return 1 |
|
|
815 | 815 | |
|
|
816 | 816 | self.lastUTTime = self.basicHeaderObj.utc |
|
|
817 | 817 | currentSize = self.fileSize - self.fp.tell() |
|
|
818 | 818 | neededSize = self.processingHeaderObj.blockSize + self.basicHeaderSize |
|
|
819 | 819 | |
|
|
820 | 820 | if (currentSize >= neededSize): |
|
|
821 | 821 | self.basicHeaderObj.read(self.fp) |
|
|
822 | 822 | return 1 |
|
|
823 | 823 | |
|
|
824 | 824 | if self.__waitNewBlock(): |
|
|
825 | 825 | return 1 |
|
|
826 | 826 | |
|
|
827 | 827 | if not(self.setNextFile()): |
|
|
828 | 828 | return 0 |
|
|
829 | 829 | |
|
|
830 | 830 | deltaTime = self.basicHeaderObj.utc - self.lastUTTime # |
|
|
831 | 831 | |
|
|
832 | 832 | self.flagTimeBlock = 0 |
|
|
833 | 833 | |
|
|
834 | 834 | if deltaTime > self.maxTimeStep: |
|
|
835 | 835 | self.flagTimeBlock = 1 |
|
|
836 | 836 | |
|
|
837 | 837 | return 1 |
|
|
838 | 838 | |
|
|
839 | 839 | def readNextBlock(self): |
|
|
840 | 840 | if not(self.__setNewBlock()): |
|
|
841 | 841 | return 0 |
|
|
842 | 842 | |
|
|
843 | 843 | if not(self.readBlock()): |
|
|
844 | 844 | return 0 |
|
|
845 | 845 | |
|
|
846 | 846 | return 1 |
|
|
847 | 847 | |
|
|
848 | 848 | def __readFirstHeader(self): |
|
|
849 | 849 | |
|
|
850 | 850 | self.basicHeaderObj.read(self.fp) |
|
|
851 | 851 | self.systemHeaderObj.read(self.fp) |
|
|
852 | 852 | self.radarControllerHeaderObj.read(self.fp) |
|
|
853 | 853 | self.processingHeaderObj.read(self.fp) |
|
|
854 | 854 | |
|
|
855 | 855 | self.firstHeaderSize = self.basicHeaderObj.size |
|
|
856 | 856 | |
|
|
857 | 857 | datatype = int(numpy.log2((self.processingHeaderObj.processFlags & PROCFLAG.DATATYPE_MASK))-numpy.log2(PROCFLAG.DATATYPE_CHAR)) |
|
|
858 | 858 | if datatype == 0: |
|
|
859 | 859 | datatype_str = numpy.dtype([('real','<i1'),('imag','<i1')]) |
|
|
860 | 860 | elif datatype == 1: |
|
|
861 | 861 | datatype_str = numpy.dtype([('real','<i2'),('imag','<i2')]) |
|
|
862 | 862 | elif datatype == 2: |
|
|
863 | 863 | datatype_str = numpy.dtype([('real','<i4'),('imag','<i4')]) |
|
|
864 | 864 | elif datatype == 3: |
|
|
865 | 865 | datatype_str = numpy.dtype([('real','<i8'),('imag','<i8')]) |
|
|
866 | 866 | elif datatype == 4: |
|
|
867 | 867 | datatype_str = numpy.dtype([('real','<f4'),('imag','<f4')]) |
|
|
868 | 868 | elif datatype == 5: |
|
|
869 | 869 | datatype_str = numpy.dtype([('real','<f8'),('imag','<f8')]) |
|
|
870 | 870 | else: |
|
|
871 | 871 | raise ValueError, 'Data type was not defined' |
|
|
872 | 872 | |
|
|
873 | 873 | self.dtype = datatype_str |
|
|
874 | 874 | #self.ippSeconds = 2 * 1000 * self.radarControllerHeaderObj.ipp / self.c |
|
|
875 | 875 | self.fileSizeByHeader = self.processingHeaderObj.dataBlocksPerFile * self.processingHeaderObj.blockSize + self.firstHeaderSize + self.basicHeaderSize*(self.processingHeaderObj.dataBlocksPerFile - 1) |
|
|
876 | 876 | # self.dataOut.channelList = numpy.arange(self.systemHeaderObj.numChannels) |
|
|
877 | 877 | # self.dataOut.channelIndexList = numpy.arange(self.systemHeaderObj.numChannels) |
|
|
878 | 878 | self.getBlockDimension() |
|
|
879 | 879 | |
|
|
880 | 880 | def __verifyFile(self, filename, msgFlag=True): |
|
|
881 | 881 | msg = None |
|
|
882 | 882 | try: |
|
|
883 | 883 | fp = open(filename, 'rb') |
|
|
884 | 884 | currentPosition = fp.tell() |
|
|
885 | 885 | except IOError: |
|
|
886 | 886 | traceback.print_exc() |
|
|
887 | 887 | if msgFlag: |
|
|
888 | 888 | print "The file %s can't be opened" % (filename) |
|
|
889 | 889 | return False |
|
|
890 | 890 | |
|
|
891 | 891 | neededSize = self.processingHeaderObj.blockSize + self.firstHeaderSize |
|
|
892 | 892 | |
|
|
893 | 893 | if neededSize == 0: |
|
|
894 | 894 | basicHeaderObj = BasicHeader(LOCALTIME) |
|
|
895 | 895 | systemHeaderObj = SystemHeader() |
|
|
896 | 896 | radarControllerHeaderObj = RadarControllerHeader() |
|
|
897 | 897 | processingHeaderObj = ProcessingHeader() |
|
|
898 | 898 | |
|
|
899 | 899 | try: |
|
|
900 | 900 | if not( basicHeaderObj.read(fp) ): raise IOError |
|
|
901 | 901 | if not( systemHeaderObj.read(fp) ): raise IOError |
|
|
902 | 902 | if not( radarControllerHeaderObj.read(fp) ): raise IOError |
|
|
903 | 903 | if not( processingHeaderObj.read(fp) ): raise IOError |
|
|
904 | 904 | # data_type = int(numpy.log2((processingHeaderObj.processFlags & PROCFLAG.DATATYPE_MASK))-numpy.log2(PROCFLAG.DATATYPE_CHAR)) |
|
|
905 | 905 | |
|
|
906 | 906 | neededSize = processingHeaderObj.blockSize + basicHeaderObj.size |
|
|
907 | 907 | |
|
|
908 | 908 | except IOError: |
|
|
909 | 909 | traceback.print_exc() |
|
|
910 | 910 | if msgFlag: |
|
|
911 | 911 | print "\tThe file %s is empty or it hasn't enough data" % filename |
|
|
912 | 912 | |
|
|
913 | 913 | fp.close() |
|
|
914 | 914 | return False |
|
|
915 | 915 | else: |
|
|
916 | 916 | msg = "\tSkipping the file %s due to it hasn't enough data" %filename |
|
|
917 | 917 | |
|
|
918 | 918 | fp.close() |
|
|
919 | 919 | fileSize = os.path.getsize(filename) |
|
|
920 | 920 | currentSize = fileSize - currentPosition |
|
|
921 | 921 | if currentSize < neededSize: |
|
|
922 | 922 | if msgFlag and (msg != None): |
|
|
923 | 923 | print msg #print"\tSkipping the file %s due to it hasn't enough data" %filename |
|
|
924 | 924 | return False |
|
|
925 | 925 | |
|
|
926 | 926 | return True |
|
|
927 | 927 | |
|
|
928 | 928 | def setup(self, |
|
|
929 | 929 | path=None, |
|
|
930 | 930 | startDate=None, |
|
|
931 | 931 | endDate=None, |
|
|
932 | 932 | startTime=datetime.time(0,0,0), |
|
|
933 | 933 | endTime=datetime.time(23,59,59), |
|
|
934 | 934 | set=None, |
|
|
935 | 935 | expLabel = "", |
|
|
936 | 936 | ext = None, |
|
|
937 | 937 | online = False, |
|
|
938 | 938 | delay = 60, |
|
|
939 | 939 | walk = True, |
|
|
940 | 940 | getblock = False): |
|
|
941 | 941 | |
|
|
942 | 942 | if path == None: |
|
|
943 | 943 | raise ValueError, "The path is not valid" |
|
|
944 | 944 | |
|
|
945 | 945 | if ext == None: |
|
|
946 | 946 | ext = self.ext |
|
|
947 | 947 | |
|
|
948 | 948 | if online: |
|
|
949 | 949 | print "Searching files in online mode..." |
|
|
950 | 950 | |
|
|
951 | 951 | for nTries in range( self.nTries ): |
|
|
952 | 952 | fullpath, foldercounter, file, year, doy, set = self.__searchFilesOnLine(path=path, expLabel=expLabel, ext=ext, walk=walk, set=set) |
|
|
953 | 953 | |
|
|
954 | 954 | if fullpath: |
|
|
955 | 955 | break |
|
|
956 | 956 | |
|
|
957 | 957 | print '\tWaiting %0.2f sec for an valid file in %s: try %02d ...' % (self.delay, path, nTries+1) |
|
|
958 | 958 | time.sleep( self.delay ) |
|
|
959 | 959 | |
|
|
960 | 960 | if not(fullpath): |
|
|
961 | 961 | print "There 'isn't valied files in %s" % path |
|
|
962 | 962 | return None |
|
|
963 | 963 | |
|
|
964 | 964 | self.year = year |
|
|
965 | 965 | self.doy = doy |
|
|
966 | 966 | self.set = set - 1 |
|
|
967 | 967 | self.path = path |
|
|
968 | 968 | self.foldercounter = foldercounter |
|
|
969 | 969 | last_set = None |
|
|
970 | 970 | |
|
|
971 | 971 | else: |
|
|
972 | 972 | print "Searching files in offline mode ..." |
|
|
973 | 973 | pathList, filenameList = self.__searchFilesOffLine(path, startDate=startDate, endDate=endDate, |
|
|
974 | 974 | startTime=startTime, endTime=endTime, |
|
|
975 | 975 | set=set, expLabel=expLabel, ext=ext, |
|
|
976 | 976 | walk=walk) |
|
|
977 | 977 | |
|
|
978 | 978 | if not(pathList): |
|
|
979 | 979 | print "No *%s files into the folder %s \nfor the range: %s - %s"%(ext, path, |
|
|
980 | 980 | datetime.datetime.combine(startDate,startTime).ctime(), |
|
|
981 | 981 | datetime.datetime.combine(endDate,endTime).ctime()) |
|
|
982 | 982 | |
|
|
983 | 983 | sys.exit(-1) |
|
|
984 | 984 | |
|
|
985 | 985 | |
|
|
986 | 986 | self.fileIndex = -1 |
|
|
987 | 987 | self.pathList = pathList |
|
|
988 | 988 | self.filenameList = filenameList |
|
|
989 | 989 | file_name = os.path.basename(filenameList[-1]) |
|
|
990 | 990 | basename, ext = os.path.splitext(file_name) |
|
|
991 | 991 | last_set = int(basename[-3:]) |
|
|
992 | 992 | |
|
|
993 | 993 | self.online = online |
|
|
994 | 994 | self.delay = delay |
|
|
995 | 995 | ext = ext.lower() |
|
|
996 | 996 | self.ext = ext |
|
|
997 |
self.get |
|
|
|
997 | self.getByBlock = getblock | |
|
|
998 | ||
|
|
998 | 999 | if not(self.setNextFile()): |
|
|
999 | 1000 | if (startDate!=None) and (endDate!=None): |
|
|
1000 | 1001 | print "No files in range: %s - %s" %(datetime.datetime.combine(startDate,startTime).ctime(), datetime.datetime.combine(endDate,endTime).ctime()) |
|
|
1001 | 1002 | elif startDate != None: |
|
|
1002 | 1003 | print "No files in range: %s" %(datetime.datetime.combine(startDate,startTime).ctime()) |
|
|
1003 | 1004 | else: |
|
|
1004 | 1005 | print "No files" |
|
|
1005 | 1006 | |
|
|
1006 | 1007 | sys.exit(-1) |
|
|
1007 | 1008 | |
|
|
1008 | 1009 | # self.updateDataHeader() |
|
|
1009 | 1010 | if last_set != None: |
|
|
1010 | 1011 | self.dataOut.last_block = last_set * self.processingHeaderObj.dataBlocksPerFile + self.basicHeaderObj.dataBlock |
|
|
1011 | 1012 | return |
|
|
1012 | 1013 | |
|
|
1013 | 1014 | def getBasicHeader(self): |
|
|
1014 | 1015 | |
|
|
1015 | 1016 | self.dataOut.utctime = self.basicHeaderObj.utc + self.basicHeaderObj.miliSecond/1000. + self.profileIndex * self.radarControllerHeaderObj.ippSeconds |
|
|
1016 | 1017 | |
|
|
1017 | 1018 | self.dataOut.flagTimeBlock = self.flagTimeBlock |
|
|
1018 | 1019 | |
|
|
1019 | 1020 | self.dataOut.timeZone = self.basicHeaderObj.timeZone |
|
|
1020 | 1021 | |
|
|
1021 | 1022 | self.dataOut.dstFlag = self.basicHeaderObj.dstFlag |
|
|
1022 | 1023 | |
|
|
1023 | 1024 | self.dataOut.errorCount = self.basicHeaderObj.errorCount |
|
|
1024 | 1025 | |
|
|
1025 | 1026 | self.dataOut.useLocalTime = self.basicHeaderObj.useLocalTime |
|
|
1026 | 1027 | |
|
|
1027 | 1028 | def getFirstHeader(self): |
|
|
1028 | 1029 | |
|
|
1029 | 1030 | raise ValueError, "This method has not been implemented" |
|
|
1030 | 1031 | |
|
|
1031 | 1032 | def getData(self): |
|
|
1032 | 1033 | |
|
|
1033 | 1034 | raise ValueError, "This method has not been implemented" |
|
|
1034 | 1035 | |
|
|
1035 | 1036 | def hasNotDataInBuffer(self): |
|
|
1036 | 1037 | |
|
|
1037 | 1038 | raise ValueError, "This method has not been implemented" |
|
|
1038 | 1039 | |
|
|
1039 | 1040 | def readBlock(self): |
|
|
1040 | 1041 | |
|
|
1041 | 1042 | raise ValueError, "This method has not been implemented" |
|
|
1042 | 1043 | |
|
|
1043 | 1044 | def isEndProcess(self): |
|
|
1044 | 1045 | |
|
|
1045 | 1046 | return self.flagNoMoreFiles |
|
|
1046 | 1047 | |
|
|
1047 | 1048 | def printReadBlocks(self): |
|
|
1048 | 1049 | |
|
|
1049 | 1050 | print "Number of read blocks per file %04d" %self.nReadBlocks |
|
|
1050 | 1051 | |
|
|
1051 | 1052 | def printTotalBlocks(self): |
|
|
1052 | 1053 | |
|
|
1053 | 1054 | print "Number of read blocks %04d" %self.nTotalBlocks |
|
|
1054 | 1055 | |
|
|
1055 | 1056 | def printNumberOfBlock(self): |
|
|
1056 | 1057 | |
|
|
1057 | 1058 | if self.flagIsNewBlock: |
|
|
1058 | 1059 | print "Block No. %04d, Total blocks %04d -> %s" %(self.basicHeaderObj.dataBlock, self.nTotalBlocks, self.dataOut.datatime.ctime()) |
|
|
1059 | 1060 | self.dataOut.blocknow = self.basicHeaderObj.dataBlock |
|
|
1060 | 1061 | |
|
|
1061 | 1062 | def printInfo(self): |
|
|
1062 | 1063 | |
|
|
1063 | 1064 | if self.__printInfo == False: |
|
|
1064 | 1065 | return |
|
|
1065 | 1066 | |
|
|
1066 | 1067 | self.basicHeaderObj.printInfo() |
|
|
1067 | 1068 | self.systemHeaderObj.printInfo() |
|
|
1068 | 1069 | self.radarControllerHeaderObj.printInfo() |
|
|
1069 | 1070 | self.processingHeaderObj.printInfo() |
|
|
1070 | 1071 | |
|
|
1071 | 1072 | self.__printInfo = False |
|
|
1072 | 1073 | |
|
|
1073 | 1074 | |
|
|
1074 | 1075 | def run(self, **kwargs): |
|
|
1075 | 1076 | |
|
|
1076 | 1077 | if not(self.isConfig): |
|
|
1077 | 1078 | |
|
|
1078 | 1079 | # self.dataOut = dataOut |
|
|
1079 | 1080 | self.setup(**kwargs) |
|
|
1080 | 1081 | self.isConfig = True |
|
|
1081 | 1082 | |
|
|
1082 | 1083 | self.getData() |
|
|
1083 | 1084 | |
|
|
1084 | 1085 | class JRODataWriter(JRODataIO): |
|
|
1085 | 1086 | |
|
|
1086 | 1087 | """ |
|
|
1087 | 1088 | Esta clase permite escribir datos a archivos procesados (.r o ,pdata). La escritura |
|
|
1088 | 1089 | de los datos siempre se realiza por bloques. |
|
|
1089 | 1090 | """ |
|
|
1090 | 1091 | |
|
|
1091 | 1092 | blockIndex = 0 |
|
|
1092 | 1093 | |
|
|
1093 | 1094 | path = None |
|
|
1094 | 1095 | |
|
|
1095 | 1096 | setFile = None |
|
|
1096 | 1097 | |
|
|
1097 | 1098 | profilesPerBlock = None |
|
|
1098 | 1099 | |
|
|
1099 | 1100 | blocksPerFile = None |
|
|
1100 | 1101 | |
|
|
1101 | 1102 | nWriteBlocks = 0 |
|
|
1102 | 1103 | |
|
|
1103 | 1104 | def __init__(self, dataOut=None): |
|
|
1104 | 1105 | raise ValueError, "Not implemented" |
|
|
1105 | 1106 | |
|
|
1106 | 1107 | |
|
|
1107 | 1108 | def hasAllDataInBuffer(self): |
|
|
1108 | 1109 | raise ValueError, "Not implemented" |
|
|
1109 | 1110 | |
|
|
1110 | 1111 | |
|
|
1111 | 1112 | def setBlockDimension(self): |
|
|
1112 | 1113 | raise ValueError, "Not implemented" |
|
|
1113 | 1114 | |
|
|
1114 | 1115 | |
|
|
1115 | 1116 | def writeBlock(self): |
|
|
1116 | 1117 | raise ValueError, "No implemented" |
|
|
1117 | 1118 | |
|
|
1118 | 1119 | |
|
|
1119 | 1120 | def putData(self): |
|
|
1120 | 1121 | raise ValueError, "No implemented" |
|
|
1121 | 1122 | |
|
|
1122 | 1123 | |
|
|
1123 | 1124 | def setBasicHeader(self): |
|
|
1124 | 1125 | |
|
|
1125 | 1126 | self.basicHeaderObj.size = self.basicHeaderSize #bytes |
|
|
1126 | 1127 | self.basicHeaderObj.version = self.versionFile |
|
|
1127 | 1128 | self.basicHeaderObj.dataBlock = self.nTotalBlocks |
|
|
1128 | 1129 | |
|
|
1129 | 1130 | utc = numpy.floor(self.dataOut.utctime) |
|
|
1130 | 1131 | milisecond = (self.dataOut.utctime - utc)* 1000.0 |
|
|
1131 | 1132 | |
|
|
1132 | 1133 | self.basicHeaderObj.utc = utc |
|
|
1133 | 1134 | self.basicHeaderObj.miliSecond = milisecond |
|
|
1134 | 1135 | self.basicHeaderObj.timeZone = self.dataOut.timeZone |
|
|
1135 | 1136 | self.basicHeaderObj.dstFlag = self.dataOut.dstFlag |
|
|
1136 | 1137 | self.basicHeaderObj.errorCount = self.dataOut.errorCount |
|
|
1137 | 1138 | |
|
|
1138 | 1139 | def setFirstHeader(self): |
|
|
1139 | 1140 | """ |
|
|
1140 | 1141 | Obtiene una copia del First Header |
|
|
1141 | 1142 | |
|
|
1142 | 1143 | Affected: |
|
|
1143 | 1144 | |
|
|
1144 | 1145 | self.basicHeaderObj |
|
|
1145 | 1146 | self.systemHeaderObj |
|
|
1146 | 1147 | self.radarControllerHeaderObj |
|
|
1147 | 1148 | self.processingHeaderObj self. |
|
|
1148 | 1149 | |
|
|
1149 | 1150 | Return: |
|
|
1150 | 1151 | None |
|
|
1151 | 1152 | """ |
|
|
1152 | 1153 | |
|
|
1153 | 1154 | raise ValueError, "No implemented" |
|
|
1154 | 1155 | |
|
|
1155 | 1156 | def __writeFirstHeader(self): |
|
|
1156 | 1157 | """ |
|
|
1157 | 1158 | Escribe el primer header del file es decir el Basic header y el Long header (SystemHeader, RadarControllerHeader, ProcessingHeader) |
|
|
1158 | 1159 | |
|
|
1159 | 1160 | Affected: |
|
|
1160 | 1161 | __dataType |
|
|
1161 | 1162 | |
|
|
1162 | 1163 | Return: |
|
|
1163 | 1164 | None |
|
|
1164 | 1165 | """ |
|
|
1165 | 1166 | |
|
|
1166 | 1167 | # CALCULAR PARAMETROS |
|
|
1167 | 1168 | |
|
|
1168 | 1169 | sizeLongHeader = self.systemHeaderObj.size + self.radarControllerHeaderObj.size + self.processingHeaderObj.size |
|
|
1169 | 1170 | self.basicHeaderObj.size = self.basicHeaderSize + sizeLongHeader |
|
|
1170 | 1171 | |
|
|
1171 | 1172 | self.basicHeaderObj.write(self.fp) |
|
|
1172 | 1173 | self.systemHeaderObj.write(self.fp) |
|
|
1173 | 1174 | self.radarControllerHeaderObj.write(self.fp) |
|
|
1174 | 1175 | self.processingHeaderObj.write(self.fp) |
|
|
1175 | 1176 | |
|
|
1176 | 1177 | self.dtype = self.dataOut.dtype |
|
|
1177 | 1178 | |
|
|
1178 | 1179 | def __setNewBlock(self): |
|
|
1179 | 1180 | """ |
|
|
1180 | 1181 | Si es un nuevo file escribe el First Header caso contrario escribe solo el Basic Header |
|
|
1181 | 1182 | |
|
|
1182 | 1183 | Return: |
|
|
1183 | 1184 | 0 : si no pudo escribir nada |
|
|
1184 | 1185 | 1 : Si escribio el Basic el First Header |
|
|
1185 | 1186 | """ |
|
|
1186 | 1187 | if self.fp == None: |
|
|
1187 | 1188 | self.setNextFile() |
|
|
1188 | 1189 | |
|
|
1189 | 1190 | if self.flagIsNewFile: |
|
|
1190 | 1191 | return 1 |
|
|
1191 | 1192 | |
|
|
1192 | 1193 | if self.blockIndex < self.processingHeaderObj.dataBlocksPerFile: |
|
|
1193 | 1194 | self.basicHeaderObj.write(self.fp) |
|
|
1194 | 1195 | return 1 |
|
|
1195 | 1196 | |
|
|
1196 | 1197 | if not( self.setNextFile() ): |
|
|
1197 | 1198 | return 0 |
|
|
1198 | 1199 | |
|
|
1199 | 1200 | return 1 |
|
|
1200 | 1201 | |
|
|
1201 | 1202 | |
|
|
1202 | 1203 | def writeNextBlock(self): |
|
|
1203 | 1204 | """ |
|
|
1204 | 1205 | Selecciona el bloque siguiente de datos y los escribe en un file |
|
|
1205 | 1206 | |
|
|
1206 | 1207 | Return: |
|
|
1207 | 1208 | 0 : Si no hizo pudo escribir el bloque de datos |
|
|
1208 | 1209 | 1 : Si no pudo escribir el bloque de datos |
|
|
1209 | 1210 | """ |
|
|
1210 | 1211 | if not( self.__setNewBlock() ): |
|
|
1211 | 1212 | return 0 |
|
|
1212 | 1213 | |
|
|
1213 | 1214 | self.writeBlock() |
|
|
1214 | 1215 | |
|
|
1215 | 1216 | return 1 |
|
|
1216 | 1217 | |
|
|
1217 | 1218 | def setNextFile(self): |
|
|
1218 | 1219 | """ |
|
|
1219 | 1220 | Determina el siguiente file que sera escrito |
|
|
1220 | 1221 | |
|
|
1221 | 1222 | Affected: |
|
|
1222 | 1223 | self.filename |
|
|
1223 | 1224 | self.subfolder |
|
|
1224 | 1225 | self.fp |
|
|
1225 | 1226 | self.setFile |
|
|
1226 | 1227 | self.flagIsNewFile |
|
|
1227 | 1228 | |
|
|
1228 | 1229 | Return: |
|
|
1229 | 1230 | 0 : Si el archivo no puede ser escrito |
|
|
1230 | 1231 | 1 : Si el archivo esta listo para ser escrito |
|
|
1231 | 1232 | """ |
|
|
1232 | 1233 | ext = self.ext |
|
|
1233 | 1234 | path = self.path |
|
|
1234 | 1235 | |
|
|
1235 | 1236 | if self.fp != None: |
|
|
1236 | 1237 | self.fp.close() |
|
|
1237 | 1238 | |
|
|
1238 | 1239 | timeTuple = time.localtime( self.dataOut.utctime) |
|
|
1239 | 1240 | subfolder = 'd%4.4d%3.3d' % (timeTuple.tm_year,timeTuple.tm_yday) |
|
|
1240 | 1241 | |
|
|
1241 | 1242 | fullpath = os.path.join( path, subfolder ) |
|
|
1242 | 1243 | if not( os.path.exists(fullpath) ): |
|
|
1243 | 1244 | os.mkdir(fullpath) |
|
|
1244 | 1245 | self.setFile = -1 #inicializo mi contador de seteo |
|
|
1245 | 1246 | else: |
|
|
1246 | 1247 | filesList = os.listdir( fullpath ) |
|
|
1247 | 1248 | if len( filesList ) > 0: |
|
|
1248 | 1249 | filesList = sorted( filesList, key=str.lower ) |
|
|
1249 | 1250 | filen = filesList[-1] |
|
|
1250 | 1251 | # el filename debera tener el siguiente formato |
|
|
1251 | 1252 | # 0 1234 567 89A BCDE (hex) |
|
|
1252 | 1253 | # x YYYY DDD SSS .ext |
|
|
1253 | 1254 | if isNumber( filen[8:11] ): |
|
|
1254 | 1255 | self.setFile = int( filen[8:11] ) #inicializo mi contador de seteo al seteo del ultimo file |
|
|
1255 | 1256 | else: |
|
|
1256 | 1257 | self.setFile = -1 |
|
|
1257 | 1258 | else: |
|
|
1258 | 1259 | self.setFile = -1 #inicializo mi contador de seteo |
|
|
1259 | 1260 | |
|
|
1260 | 1261 | setFile = self.setFile |
|
|
1261 | 1262 | setFile += 1 |
|
|
1262 | 1263 | |
|
|
1263 | 1264 | file = '%s%4.4d%3.3d%3.3d%s' % (self.optchar, |
|
|
1264 | 1265 | timeTuple.tm_year, |
|
|
1265 | 1266 | timeTuple.tm_yday, |
|
|
1266 | 1267 | setFile, |
|
|
1267 | 1268 | ext ) |
|
|
1268 | 1269 | |
|
|
1269 | 1270 | filename = os.path.join( path, subfolder, file ) |
|
|
1270 | 1271 | |
|
|
1271 | 1272 | fp = open( filename,'wb' ) |
|
|
1272 | 1273 | |
|
|
1273 | 1274 | self.blockIndex = 0 |
|
|
1274 | 1275 | |
|
|
1275 | 1276 | #guardando atributos |
|
|
1276 | 1277 | self.filename = filename |
|
|
1277 | 1278 | self.subfolder = subfolder |
|
|
1278 | 1279 | self.fp = fp |
|
|
1279 | 1280 | self.setFile = setFile |
|
|
1280 | 1281 | self.flagIsNewFile = 1 |
|
|
1281 | 1282 | |
|
|
1282 | 1283 | self.setFirstHeader() |
|
|
1283 | 1284 | |
|
|
1284 | 1285 | print 'Writing the file: %s'%self.filename |
|
|
1285 | 1286 | |
|
|
1286 | 1287 | self.__writeFirstHeader() |
|
|
1287 | 1288 | |
|
|
1288 | 1289 | return 1 |
|
|
1289 | 1290 | |
|
|
1290 | 1291 | def setup(self, dataOut, path, blocksPerFile, profilesPerBlock=64, set=0, ext=None): |
|
|
1291 | 1292 | """ |
|
|
1292 | 1293 | Setea el tipo de formato en la cual sera guardada la data y escribe el First Header |
|
|
1293 | 1294 | |
|
|
1294 | 1295 | Inputs: |
|
|
1295 | 1296 | path : el path destino en el cual se escribiran los files a crear |
|
|
1296 | 1297 | format : formato en el cual sera salvado un file |
|
|
1297 | 1298 | set : el setebo del file |
|
|
1298 | 1299 | |
|
|
1299 | 1300 | Return: |
|
|
1300 | 1301 | 0 : Si no realizo un buen seteo |
|
|
1301 | 1302 | 1 : Si realizo un buen seteo |
|
|
1302 | 1303 | """ |
|
|
1303 | 1304 | |
|
|
1304 | 1305 | if ext == None: |
|
|
1305 | 1306 | ext = self.ext |
|
|
1306 | 1307 | |
|
|
1307 | 1308 | ext = ext.lower() |
|
|
1308 | 1309 | |
|
|
1309 | 1310 | self.ext = ext |
|
|
1310 | 1311 | |
|
|
1311 | 1312 | self.path = path |
|
|
1312 | 1313 | |
|
|
1313 | 1314 | self.setFile = set - 1 |
|
|
1314 | 1315 | |
|
|
1315 | 1316 | self.blocksPerFile = blocksPerFile |
|
|
1316 | 1317 | |
|
|
1317 | 1318 | self.profilesPerBlock = profilesPerBlock |
|
|
1318 | 1319 | |
|
|
1319 | 1320 | self.dataOut = dataOut |
|
|
1320 | 1321 | |
|
|
1321 | 1322 | if not(self.setNextFile()): |
|
|
1322 | 1323 | print "There isn't a next file" |
|
|
1323 | 1324 | return 0 |
|
|
1324 | 1325 | |
|
|
1325 | 1326 | self.setBlockDimension() |
|
|
1326 | 1327 | |
|
|
1327 | 1328 | return 1 |
|
|
1328 | 1329 | |
|
|
1329 | 1330 | def run(self, dataOut, **kwargs): |
|
|
1330 | 1331 | |
|
|
1331 | 1332 | if not(self.isConfig): |
|
|
1332 | 1333 | |
|
|
1333 | 1334 | self.setup(dataOut, **kwargs) |
|
|
1334 | 1335 | self.isConfig = True |
|
|
1335 | 1336 | |
|
|
1336 | 1337 | self.putData() |
|
|
1337 | 1338 | |
| @@ -1,763 +1,763 | |||
|
|
1 | 1 | ''' |
|
|
2 | 2 | |
|
|
3 | 3 | ''' |
|
|
4 | 4 | |
|
|
5 | 5 | import os, sys |
|
|
6 | 6 | import time, datetime |
|
|
7 | 7 | import numpy |
|
|
8 | 8 | import fnmatch |
|
|
9 | 9 | import glob |
|
|
10 | 10 | |
|
|
11 | 11 | try: |
|
|
12 | 12 | import pyfits |
|
|
13 | 13 | except: |
|
|
14 | 14 | """ |
|
|
15 | 15 | """ |
|
|
16 | 16 | |
|
|
17 | 17 | from xml.etree.ElementTree import ElementTree |
|
|
18 | 18 | |
|
|
19 | 19 | from jroIO_base import isDoyFolder, isNumber |
|
|
20 | 20 | from model.proc.jroproc_base import Operation, ProcessingUnit |
|
|
21 | 21 | |
|
|
22 | 22 | class ParameterConf: |
|
|
23 | 23 | ELEMENTNAME = 'Parameter' |
|
|
24 | 24 | def __init__(self): |
|
|
25 | 25 | self.name = '' |
|
|
26 | 26 | self.value = '' |
|
|
27 | 27 | |
|
|
28 | 28 | def readXml(self, parmElement): |
|
|
29 | 29 | self.name = parmElement.get('name') |
|
|
30 | 30 | self.value = parmElement.get('value') |
|
|
31 | 31 | |
|
|
32 | 32 | def getElementName(self): |
|
|
33 | 33 | return self.ELEMENTNAME |
|
|
34 | 34 | |
|
|
35 | 35 | class Metadata: |
|
|
36 | 36 | |
|
|
37 | 37 | def __init__(self, filename): |
|
|
38 | 38 | self.parmConfObjList = [] |
|
|
39 | 39 | self.readXml(filename) |
|
|
40 | 40 | |
|
|
41 | 41 | def readXml(self, filename): |
|
|
42 | 42 | self.projectElement = None |
|
|
43 | 43 | self.procUnitConfObjDict = {} |
|
|
44 | 44 | self.projectElement = ElementTree().parse(filename) |
|
|
45 | 45 | self.project = self.projectElement.tag |
|
|
46 | 46 | |
|
|
47 | 47 | parmElementList = self.projectElement.getiterator(ParameterConf().getElementName()) |
|
|
48 | 48 | |
|
|
49 | 49 | for parmElement in parmElementList: |
|
|
50 | 50 | parmConfObj = ParameterConf() |
|
|
51 | 51 | parmConfObj.readXml(parmElement) |
|
|
52 | 52 | self.parmConfObjList.append(parmConfObj) |
|
|
53 | 53 | |
|
|
54 | 54 | class FitsWriter(Operation): |
|
|
55 | 55 | |
|
|
56 | 56 | def __init__(self): |
|
|
57 | 57 | self.isConfig = False |
|
|
58 | 58 | self.dataBlocksPerFile = None |
|
|
59 | 59 | self.blockIndex = 0 |
|
|
60 | 60 | self.flagIsNewFile = 1 |
|
|
61 | 61 | self.fitsObj = None |
|
|
62 | 62 | self.optchar = 'P' |
|
|
63 | 63 | self.ext = '.fits' |
|
|
64 | 64 | self.setFile = 0 |
|
|
65 | 65 | |
|
|
66 | 66 | def setFitsHeader(self, dataOut, metadatafile): |
|
|
67 | 67 | |
|
|
68 | 68 | header_data = pyfits.PrimaryHDU() |
|
|
69 | 69 | |
|
|
70 | 70 | metadata4fits = Metadata(metadatafile) |
|
|
71 | 71 | for parameter in metadata4fits.parmConfObjList: |
|
|
72 | 72 | parm_name = parameter.name |
|
|
73 | 73 | parm_value = parameter.value |
|
|
74 | 74 | |
|
|
75 | 75 | # if parm_value == 'fromdatadatetime': |
|
|
76 | 76 | # value = time.strftime("%b %d %Y %H:%M:%S", dataOut.datatime.timetuple()) |
|
|
77 | 77 | # elif parm_value == 'fromdataheights': |
|
|
78 | 78 | # value = dataOut.nHeights |
|
|
79 | 79 | # elif parm_value == 'fromdatachannel': |
|
|
80 | 80 | # value = dataOut.nChannels |
|
|
81 | 81 | # elif parm_value == 'fromdatasamples': |
|
|
82 | 82 | # value = dataOut.nFFTPoints |
|
|
83 | 83 | # else: |
|
|
84 | 84 | # value = parm_value |
|
|
85 | 85 | |
|
|
86 | 86 | header_data.header[parm_name] = parm_value |
|
|
87 | 87 | |
|
|
88 | 88 | |
|
|
89 | 89 | header_data.header['DATETIME'] = time.strftime("%b %d %Y %H:%M:%S", dataOut.datatime.timetuple()) |
|
|
90 | 90 | header_data.header['CHANNELLIST'] = str(dataOut.channelList) |
|
|
91 | 91 | header_data.header['NCHANNELS'] = dataOut.nChannels |
|
|
92 | 92 | #header_data.header['HEIGHTS'] = dataOut.heightList |
|
|
93 | 93 | header_data.header['NHEIGHTS'] = dataOut.nHeights |
|
|
94 | 94 | |
|
|
95 | 95 | header_data.header['IPPSECONDS'] = dataOut.ippSeconds |
|
|
96 | 96 | header_data.header['NCOHINT'] = dataOut.nCohInt |
|
|
97 | 97 | header_data.header['NINCOHINT'] = dataOut.nIncohInt |
|
|
98 | 98 | header_data.header['TIMEZONE'] = dataOut.timeZone |
|
|
99 | 99 | header_data.header['NBLOCK'] = self.blockIndex |
|
|
100 | 100 | |
|
|
101 | 101 | header_data.writeto(self.filename) |
|
|
102 | 102 | |
|
|
103 | 103 | self.addExtension(dataOut.heightList,'HEIGHTLIST') |
|
|
104 | 104 | |
|
|
105 | 105 | |
|
|
106 | 106 | def setup(self, dataOut, path, dataBlocksPerFile, metadatafile): |
|
|
107 | 107 | |
|
|
108 | 108 | self.path = path |
|
|
109 | 109 | self.dataOut = dataOut |
|
|
110 | 110 | self.metadatafile = metadatafile |
|
|
111 | 111 | self.dataBlocksPerFile = dataBlocksPerFile |
|
|
112 | 112 | |
|
|
113 | 113 | def open(self): |
|
|
114 | 114 | self.fitsObj = pyfits.open(self.filename, mode='update') |
|
|
115 | 115 | |
|
|
116 | 116 | |
|
|
117 | 117 | def addExtension(self, data, tagname): |
|
|
118 | 118 | self.open() |
|
|
119 | 119 | extension = pyfits.ImageHDU(data=data, name=tagname) |
|
|
120 | 120 | #extension.header['TAG'] = tagname |
|
|
121 | 121 | self.fitsObj.append(extension) |
|
|
122 | 122 | self.write() |
|
|
123 | 123 | |
|
|
124 | 124 | def addData(self, data): |
|
|
125 | 125 | self.open() |
|
|
126 | 126 | extension = pyfits.ImageHDU(data=data, name=self.fitsObj[0].header['DATATYPE']) |
|
|
127 | 127 | extension.header['UTCTIME'] = self.dataOut.utctime |
|
|
128 | 128 | self.fitsObj.append(extension) |
|
|
129 | 129 | self.blockIndex += 1 |
|
|
130 | 130 | self.fitsObj[0].header['NBLOCK'] = self.blockIndex |
|
|
131 | 131 | |
|
|
132 | 132 | self.write() |
|
|
133 | 133 | |
|
|
134 | 134 | def write(self): |
|
|
135 | 135 | |
|
|
136 | 136 | self.fitsObj.flush(verbose=True) |
|
|
137 | 137 | self.fitsObj.close() |
|
|
138 | 138 | |
|
|
139 | 139 | |
|
|
140 | 140 | def setNextFile(self): |
|
|
141 | 141 | |
|
|
142 | 142 | ext = self.ext |
|
|
143 | 143 | path = self.path |
|
|
144 | 144 | |
|
|
145 | 145 | timeTuple = time.localtime( self.dataOut.utctime) |
|
|
146 | 146 | subfolder = 'd%4.4d%3.3d' % (timeTuple.tm_year,timeTuple.tm_yday) |
|
|
147 | 147 | |
|
|
148 | 148 | fullpath = os.path.join( path, subfolder ) |
|
|
149 | 149 | if not( os.path.exists(fullpath) ): |
|
|
150 | 150 | os.mkdir(fullpath) |
|
|
151 | 151 | self.setFile = -1 #inicializo mi contador de seteo |
|
|
152 | 152 | else: |
|
|
153 | 153 | filesList = os.listdir( fullpath ) |
|
|
154 | 154 | if len( filesList ) > 0: |
|
|
155 | 155 | filesList = sorted( filesList, key=str.lower ) |
|
|
156 | 156 | filen = filesList[-1] |
|
|
157 | 157 | |
|
|
158 | 158 | if isNumber( filen[8:11] ): |
|
|
159 | 159 | self.setFile = int( filen[8:11] ) #inicializo mi contador de seteo al seteo del ultimo file |
|
|
160 | 160 | else: |
|
|
161 | 161 | self.setFile = -1 |
|
|
162 | 162 | else: |
|
|
163 | 163 | self.setFile = -1 #inicializo mi contador de seteo |
|
|
164 | 164 | |
|
|
165 | 165 | setFile = self.setFile |
|
|
166 | 166 | setFile += 1 |
|
|
167 | 167 | |
|
|
168 | 168 | file = '%s%4.4d%3.3d%3.3d%s' % (self.optchar, |
|
|
169 | 169 | timeTuple.tm_year, |
|
|
170 | 170 | timeTuple.tm_yday, |
|
|
171 | 171 | setFile, |
|
|
172 | 172 | ext ) |
|
|
173 | 173 | |
|
|
174 | 174 | filename = os.path.join( path, subfolder, file ) |
|
|
175 | 175 | |
|
|
176 | 176 | self.blockIndex = 0 |
|
|
177 | 177 | self.filename = filename |
|
|
178 | 178 | self.setFile = setFile |
|
|
179 | 179 | self.flagIsNewFile = 1 |
|
|
180 | 180 | |
|
|
181 | 181 | print 'Writing the file: %s'%self.filename |
|
|
182 | 182 | |
|
|
183 | 183 | self.setFitsHeader(self.dataOut, self.metadatafile) |
|
|
184 | 184 | |
|
|
185 | 185 | return 1 |
|
|
186 | 186 | |
|
|
187 | 187 | def writeBlock(self): |
|
|
188 | 188 | self.addData(self.dataOut.data_spc) |
|
|
189 | 189 | self.flagIsNewFile = 0 |
|
|
190 | 190 | |
|
|
191 | 191 | |
|
|
192 | 192 | def __setNewBlock(self): |
|
|
193 | 193 | |
|
|
194 | 194 | if self.flagIsNewFile: |
|
|
195 | 195 | return 1 |
|
|
196 | 196 | |
|
|
197 | 197 | if self.blockIndex < self.dataBlocksPerFile: |
|
|
198 | 198 | return 1 |
|
|
199 | 199 | |
|
|
200 | 200 | if not( self.setNextFile() ): |
|
|
201 | 201 | return 0 |
|
|
202 | 202 | |
|
|
203 | 203 | return 1 |
|
|
204 | 204 | |
|
|
205 | 205 | def writeNextBlock(self): |
|
|
206 | 206 | if not( self.__setNewBlock() ): |
|
|
207 | 207 | return 0 |
|
|
208 | 208 | self.writeBlock() |
|
|
209 | 209 | return 1 |
|
|
210 | 210 | |
|
|
211 | 211 | def putData(self): |
|
|
212 | 212 | if self.flagIsNewFile: |
|
|
213 | 213 | self.setNextFile() |
|
|
214 | 214 | self.writeNextBlock() |
|
|
215 | 215 | |
|
|
216 | 216 | def run(self, dataOut, **kwargs): |
|
|
217 | 217 | if not(self.isConfig): |
|
|
218 | 218 | self.setup(dataOut, **kwargs) |
|
|
219 | 219 | self.isConfig = True |
|
|
220 | 220 | self.putData() |
|
|
221 | 221 | |
|
|
222 | 222 | |
|
|
223 | 223 | class FitsReader(ProcessingUnit): |
|
|
224 | 224 | |
|
|
225 | 225 | # __TIMEZONE = time.timezone |
|
|
226 | 226 | |
|
|
227 | 227 | expName = None |
|
|
228 | 228 | datetimestr = None |
|
|
229 | 229 | utc = None |
|
|
230 | 230 | nChannels = None |
|
|
231 | 231 | nSamples = None |
|
|
232 | 232 | dataBlocksPerFile = None |
|
|
233 | 233 | comments = None |
|
|
234 | 234 | lastUTTime = None |
|
|
235 | 235 | header_dict = None |
|
|
236 | 236 | data = None |
|
|
237 | 237 | data_header_dict = None |
|
|
238 | 238 | |
|
|
239 | 239 | def __init__(self): |
|
|
240 | 240 | self.isConfig = False |
|
|
241 | 241 | self.ext = '.fits' |
|
|
242 | 242 | self.setFile = 0 |
|
|
243 | 243 | self.flagNoMoreFiles = 0 |
|
|
244 | 244 | self.flagIsNewFile = 1 |
|
|
245 | 245 | self.flagTimeBlock = None |
|
|
246 | 246 | self.fileIndex = None |
|
|
247 | 247 | self.filename = None |
|
|
248 | 248 | self.fileSize = None |
|
|
249 | 249 | self.fitsObj = None |
|
|
250 | 250 | self.timeZone = None |
|
|
251 | 251 | self.nReadBlocks = 0 |
|
|
252 | 252 | self.nTotalBlocks = 0 |
|
|
253 | 253 | self.dataOut = self.createObjByDefault() |
|
|
254 | 254 | self.maxTimeStep = 10# deberia ser definido por el usuario usando el metodo setup() |
|
|
255 | 255 | self.blockIndex = 1 |
|
|
256 | 256 | |
|
|
257 | 257 | def createObjByDefault(self): |
|
|
258 | 258 | |
|
|
259 | 259 | dataObj = Fits() |
|
|
260 | 260 | |
|
|
261 | 261 | return dataObj |
|
|
262 | 262 | |
|
|
263 | 263 | def isFileinThisTime(self, filename, startTime, endTime, useLocalTime=False): |
|
|
264 | 264 | try: |
|
|
265 | 265 | fitsObj = pyfits.open(filename,'readonly') |
|
|
266 | 266 | except: |
|
|
267 | 267 | raise IOError, "The file %s can't be opened" %(filename) |
|
|
268 | 268 | |
|
|
269 | 269 | header = fitsObj[0].header |
|
|
270 | 270 | struct_time = time.strptime(header['DATETIME'], "%b %d %Y %H:%M:%S") |
|
|
271 | 271 | utc = time.mktime(struct_time) - time.timezone #TIMEZONE debe ser un parametro del header FITS |
|
|
272 | 272 | |
|
|
273 | 273 | ltc = utc |
|
|
274 | 274 | if useLocalTime: |
|
|
275 | 275 | ltc -= time.timezone |
|
|
276 | 276 | thisDatetime = datetime.datetime.utcfromtimestamp(ltc) |
|
|
277 | 277 | thisTime = thisDatetime.time() |
|
|
278 | 278 | |
|
|
279 | 279 | if not ((startTime <= thisTime) and (endTime > thisTime)): |
|
|
280 | 280 | return None |
|
|
281 | 281 | |
|
|
282 | 282 | return thisDatetime |
|
|
283 | 283 | |
|
|
284 | 284 | def __setNextFileOnline(self): |
|
|
285 | 285 | raise ValueError, "No implemented" |
|
|
286 | 286 | |
|
|
287 | 287 | def __setNextFileOffline(self): |
|
|
288 | 288 | idFile = self.fileIndex |
|
|
289 | 289 | |
|
|
290 | 290 | while (True): |
|
|
291 | 291 | idFile += 1 |
|
|
292 | 292 | if not(idFile < len(self.filenameList)): |
|
|
293 | 293 | self.flagNoMoreFiles = 1 |
|
|
294 | 294 | print "No more Files" |
|
|
295 | 295 | return 0 |
|
|
296 | 296 | |
|
|
297 | 297 | filename = self.filenameList[idFile] |
|
|
298 | 298 | |
|
|
299 | 299 | # if not(self.__verifyFile(filename)): |
|
|
300 | 300 | # continue |
|
|
301 | 301 | |
|
|
302 | 302 | fileSize = os.path.getsize(filename) |
|
|
303 | 303 | fitsObj = pyfits.open(filename,'readonly') |
|
|
304 | 304 | break |
|
|
305 | 305 | |
|
|
306 | 306 | self.flagIsNewFile = 1 |
|
|
307 | 307 | self.fileIndex = idFile |
|
|
308 | 308 | self.filename = filename |
|
|
309 | 309 | self.fileSize = fileSize |
|
|
310 | 310 | self.fitsObj = fitsObj |
|
|
311 | 311 | self.blockIndex = 0 |
|
|
312 | 312 | print "Setting the file: %s"%self.filename |
|
|
313 | 313 | |
|
|
314 | 314 | return 1 |
|
|
315 | 315 | |
|
|
316 | 316 | def readHeader(self): |
|
|
317 | 317 | headerObj = self.fitsObj[0] |
|
|
318 | 318 | |
|
|
319 | 319 | self.header_dict = headerObj.header |
|
|
320 | 320 | if 'EXPNAME' in headerObj.header.keys(): |
|
|
321 | 321 | self.expName = headerObj.header['EXPNAME'] |
|
|
322 | 322 | |
|
|
323 | 323 | if 'DATATYPE' in headerObj.header.keys(): |
|
|
324 | 324 | self.dataType = headerObj.header['DATATYPE'] |
|
|
325 | 325 | |
|
|
326 | 326 | self.datetimestr = headerObj.header['DATETIME'] |
|
|
327 | 327 | channelList = headerObj.header['CHANNELLIST'] |
|
|
328 | 328 | channelList = channelList.split('[') |
|
|
329 | 329 | channelList = channelList[1].split(']') |
|
|
330 | 330 | channelList = channelList[0].split(',') |
|
|
331 | 331 | channelList = [int(ch) for ch in channelList] |
|
|
332 | 332 | self.channelList = channelList |
|
|
333 | 333 | self.nChannels = headerObj.header['NCHANNELS'] |
|
|
334 | 334 | self.nHeights = headerObj.header['NHEIGHTS'] |
|
|
335 | 335 | self.ippSeconds = headerObj.header['IPPSECONDS'] |
|
|
336 | 336 | self.nCohInt = headerObj.header['NCOHINT'] |
|
|
337 | 337 | self.nIncohInt = headerObj.header['NINCOHINT'] |
|
|
338 | 338 | self.dataBlocksPerFile = headerObj.header['NBLOCK'] |
|
|
339 | 339 | self.timeZone = headerObj.header['TIMEZONE'] |
|
|
340 | 340 | |
|
|
341 | self.timeInterval = self.ippSeconds * self.nCohInt * self.nIncohInt | |
|
|
341 | # self.timeInterval = self.ippSeconds * self.nCohInt * self.nIncohInt | |
|
|
342 | 342 | |
|
|
343 | 343 | if 'COMMENT' in headerObj.header.keys(): |
|
|
344 | 344 | self.comments = headerObj.header['COMMENT'] |
|
|
345 | 345 | |
|
|
346 | 346 | self.readHeightList() |
|
|
347 | 347 | |
|
|
348 | 348 | def readHeightList(self): |
|
|
349 | 349 | self.blockIndex = self.blockIndex + 1 |
|
|
350 | 350 | obj = self.fitsObj[self.blockIndex] |
|
|
351 | 351 | self.heightList = obj.data |
|
|
352 | 352 | self.blockIndex = self.blockIndex + 1 |
|
|
353 | 353 | |
|
|
354 | 354 | def readExtension(self): |
|
|
355 | 355 | obj = self.fitsObj[self.blockIndex] |
|
|
356 | 356 | self.heightList = obj.data |
|
|
357 | 357 | self.blockIndex = self.blockIndex + 1 |
|
|
358 | 358 | |
|
|
359 | 359 | def setNextFile(self): |
|
|
360 | 360 | |
|
|
361 | 361 | if self.online: |
|
|
362 | 362 | newFile = self.__setNextFileOnline() |
|
|
363 | 363 | else: |
|
|
364 | 364 | newFile = self.__setNextFileOffline() |
|
|
365 | 365 | |
|
|
366 | 366 | if not(newFile): |
|
|
367 | 367 | return 0 |
|
|
368 | 368 | |
|
|
369 | 369 | self.readHeader() |
|
|
370 | 370 | |
|
|
371 | 371 | self.nReadBlocks = 0 |
|
|
372 | 372 | # self.blockIndex = 1 |
|
|
373 | 373 | return 1 |
|
|
374 | 374 | |
|
|
375 | 375 | def __searchFilesOffLine(self, |
|
|
376 | 376 | path, |
|
|
377 | 377 | startDate, |
|
|
378 | 378 | endDate, |
|
|
379 | 379 | startTime=datetime.time(0,0,0), |
|
|
380 | 380 | endTime=datetime.time(23,59,59), |
|
|
381 | 381 | set=None, |
|
|
382 | 382 | expLabel='', |
|
|
383 | 383 | ext='.fits', |
|
|
384 | 384 | walk=True): |
|
|
385 | 385 | |
|
|
386 | 386 | pathList = [] |
|
|
387 | 387 | |
|
|
388 | 388 | if not walk: |
|
|
389 | 389 | pathList.append(path) |
|
|
390 | 390 | |
|
|
391 | 391 | else: |
|
|
392 | 392 | dirList = [] |
|
|
393 | 393 | for thisPath in os.listdir(path): |
|
|
394 | 394 | if not os.path.isdir(os.path.join(path,thisPath)): |
|
|
395 | 395 | continue |
|
|
396 | 396 | if not isDoyFolder(thisPath): |
|
|
397 | 397 | continue |
|
|
398 | 398 | |
|
|
399 | 399 | dirList.append(thisPath) |
|
|
400 | 400 | |
|
|
401 | 401 | if not(dirList): |
|
|
402 | 402 | return None, None |
|
|
403 | 403 | |
|
|
404 | 404 | thisDate = startDate |
|
|
405 | 405 | |
|
|
406 | 406 | while(thisDate <= endDate): |
|
|
407 | 407 | year = thisDate.timetuple().tm_year |
|
|
408 | 408 | doy = thisDate.timetuple().tm_yday |
|
|
409 | 409 | |
|
|
410 | 410 | matchlist = fnmatch.filter(dirList, '?' + '%4.4d%3.3d' % (year,doy) + '*') |
|
|
411 | 411 | if len(matchlist) == 0: |
|
|
412 | 412 | thisDate += datetime.timedelta(1) |
|
|
413 | 413 | continue |
|
|
414 | 414 | for match in matchlist: |
|
|
415 | 415 | pathList.append(os.path.join(path,match,expLabel)) |
|
|
416 | 416 | |
|
|
417 | 417 | thisDate += datetime.timedelta(1) |
|
|
418 | 418 | |
|
|
419 | 419 | if pathList == []: |
|
|
420 | 420 | print "Any folder was found for the date range: %s-%s" %(startDate, endDate) |
|
|
421 | 421 | return None, None |
|
|
422 | 422 | |
|
|
423 | 423 | print "%d folder(s) was(were) found for the date range: %s - %s" %(len(pathList), startDate, endDate) |
|
|
424 | 424 | |
|
|
425 | 425 | filenameList = [] |
|
|
426 | 426 | datetimeList = [] |
|
|
427 | 427 | |
|
|
428 | 428 | for i in range(len(pathList)): |
|
|
429 | 429 | |
|
|
430 | 430 | thisPath = pathList[i] |
|
|
431 | 431 | |
|
|
432 | 432 | fileList = glob.glob1(thisPath, "*%s" %ext) |
|
|
433 | 433 | fileList.sort() |
|
|
434 | 434 | |
|
|
435 | 435 | for file in fileList: |
|
|
436 | 436 | |
|
|
437 | 437 | filename = os.path.join(thisPath,file) |
|
|
438 | 438 | thisDatetime = self.isFileinThisTime(filename, startTime, endTime) |
|
|
439 | 439 | |
|
|
440 | 440 | if not(thisDatetime): |
|
|
441 | 441 | continue |
|
|
442 | 442 | |
|
|
443 | 443 | filenameList.append(filename) |
|
|
444 | 444 | datetimeList.append(thisDatetime) |
|
|
445 | 445 | |
|
|
446 | 446 | if not(filenameList): |
|
|
447 | 447 | print "Any file was found for the time range %s - %s" %(startTime, endTime) |
|
|
448 | 448 | return None, None |
|
|
449 | 449 | |
|
|
450 | 450 | print "%d file(s) was(were) found for the time range: %s - %s" %(len(filenameList), startTime, endTime) |
|
|
451 | 451 | |
|
|
452 | 452 | |
|
|
453 | 453 | for i in range(len(filenameList)): |
|
|
454 | 454 | print "%s -> [%s]" %(filenameList[i], datetimeList[i].ctime()) |
|
|
455 | 455 | |
|
|
456 | 456 | self.filenameList = filenameList |
|
|
457 | 457 | self.datetimeList = datetimeList |
|
|
458 | 458 | |
|
|
459 | 459 | return pathList, filenameList |
|
|
460 | 460 | |
|
|
461 | 461 | def setup(self, path=None, |
|
|
462 | 462 | startDate=None, |
|
|
463 | 463 | endDate=None, |
|
|
464 | 464 | startTime=datetime.time(0,0,0), |
|
|
465 | 465 | endTime=datetime.time(23,59,59), |
|
|
466 | 466 | set=0, |
|
|
467 | 467 | expLabel = "", |
|
|
468 | 468 | ext = None, |
|
|
469 | 469 | online = False, |
|
|
470 | 470 | delay = 60, |
|
|
471 | 471 | walk = True): |
|
|
472 | 472 | |
|
|
473 | 473 | if path == None: |
|
|
474 | 474 | raise ValueError, "The path is not valid" |
|
|
475 | 475 | |
|
|
476 | 476 | if ext == None: |
|
|
477 | 477 | ext = self.ext |
|
|
478 | 478 | |
|
|
479 | 479 | if not(online): |
|
|
480 | 480 | print "Searching files in offline mode ..." |
|
|
481 | 481 | pathList, filenameList = self.__searchFilesOffLine(path, startDate=startDate, endDate=endDate, |
|
|
482 | 482 | startTime=startTime, endTime=endTime, |
|
|
483 | 483 | set=set, expLabel=expLabel, ext=ext, |
|
|
484 | 484 | walk=walk) |
|
|
485 | 485 | |
|
|
486 | 486 | if not(pathList): |
|
|
487 | 487 | print "No *%s files into the folder %s \nfor the range: %s - %s"%(ext, path, |
|
|
488 | 488 | datetime.datetime.combine(startDate,startTime).ctime(), |
|
|
489 | 489 | datetime.datetime.combine(endDate,endTime).ctime()) |
|
|
490 | 490 | |
|
|
491 | 491 | sys.exit(-1) |
|
|
492 | 492 | |
|
|
493 | 493 | self.fileIndex = -1 |
|
|
494 | 494 | self.pathList = pathList |
|
|
495 | 495 | self.filenameList = filenameList |
|
|
496 | 496 | |
|
|
497 | 497 | self.online = online |
|
|
498 | 498 | self.delay = delay |
|
|
499 | 499 | ext = ext.lower() |
|
|
500 | 500 | self.ext = ext |
|
|
501 | 501 | |
|
|
502 | 502 | if not(self.setNextFile()): |
|
|
503 | 503 | if (startDate!=None) and (endDate!=None): |
|
|
504 | 504 | print "No files in range: %s - %s" %(datetime.datetime.combine(startDate,startTime).ctime(), datetime.datetime.combine(endDate,endTime).ctime()) |
|
|
505 | 505 | elif startDate != None: |
|
|
506 | 506 | print "No files in range: %s" %(datetime.datetime.combine(startDate,startTime).ctime()) |
|
|
507 | 507 | else: |
|
|
508 | 508 | print "No files" |
|
|
509 | 509 | |
|
|
510 | 510 | sys.exit(-1) |
|
|
511 | 511 | |
|
|
512 | 512 | |
|
|
513 | 513 | |
|
|
514 | 514 | def readBlock(self): |
|
|
515 | 515 | dataObj = self.fitsObj[self.blockIndex] |
|
|
516 | 516 | |
|
|
517 | 517 | self.data = dataObj.data |
|
|
518 | 518 | self.data_header_dict = dataObj.header |
|
|
519 | 519 | self.utc = self.data_header_dict['UTCTIME'] |
|
|
520 | 520 | |
|
|
521 | 521 | self.flagIsNewFile = 0 |
|
|
522 | 522 | self.blockIndex += 1 |
|
|
523 | 523 | self.nTotalBlocks += 1 |
|
|
524 | 524 | self.nReadBlocks += 1 |
|
|
525 | 525 | |
|
|
526 | 526 | return 1 |
|
|
527 | 527 | |
|
|
528 | 528 | def __jumpToLastBlock(self): |
|
|
529 | 529 | raise ValueError, "No implemented" |
|
|
530 | 530 | |
|
|
531 | 531 | def __waitNewBlock(self): |
|
|
532 | 532 | """ |
|
|
533 | 533 | Return 1 si se encontro un nuevo bloque de datos, 0 de otra forma. |
|
|
534 | 534 | |
|
|
535 | 535 | Si el modo de lectura es OffLine siempre retorn 0 |
|
|
536 | 536 | """ |
|
|
537 | 537 | if not self.online: |
|
|
538 | 538 | return 0 |
|
|
539 | 539 | |
|
|
540 | 540 | if (self.nReadBlocks >= self.dataBlocksPerFile): |
|
|
541 | 541 | return 0 |
|
|
542 | 542 | |
|
|
543 | 543 | currentPointer = self.fp.tell() |
|
|
544 | 544 | |
|
|
545 | 545 | neededSize = self.processingHeaderObj.blockSize + self.basicHeaderSize |
|
|
546 | 546 | |
|
|
547 | 547 | for nTries in range( self.nTries ): |
|
|
548 | 548 | |
|
|
549 | 549 | self.fp.close() |
|
|
550 | 550 | self.fp = open( self.filename, 'rb' ) |
|
|
551 | 551 | self.fp.seek( currentPointer ) |
|
|
552 | 552 | |
|
|
553 | 553 | self.fileSize = os.path.getsize( self.filename ) |
|
|
554 | 554 | currentSize = self.fileSize - currentPointer |
|
|
555 | 555 | |
|
|
556 | 556 | if ( currentSize >= neededSize ): |
|
|
557 | 557 | self.__rdBasicHeader() |
|
|
558 | 558 | return 1 |
|
|
559 | 559 | |
|
|
560 | 560 | print "\tWaiting %0.2f seconds for the next block, try %03d ..." % (self.delay, nTries+1) |
|
|
561 | 561 | time.sleep( self.delay ) |
|
|
562 | 562 | |
|
|
563 | 563 | |
|
|
564 | 564 | return 0 |
|
|
565 | 565 | |
|
|
566 | 566 | def __setNewBlock(self): |
|
|
567 | 567 | |
|
|
568 | 568 | if self.online: |
|
|
569 | 569 | self.__jumpToLastBlock() |
|
|
570 | 570 | |
|
|
571 | 571 | if self.flagIsNewFile: |
|
|
572 | 572 | return 1 |
|
|
573 | 573 | |
|
|
574 | 574 | self.lastUTTime = self.utc |
|
|
575 | 575 | |
|
|
576 | 576 | if self.online: |
|
|
577 | 577 | if self.__waitNewBlock(): |
|
|
578 | 578 | return 1 |
|
|
579 | 579 | |
|
|
580 | 580 | if self.nReadBlocks < self.dataBlocksPerFile: |
|
|
581 | 581 | return 1 |
|
|
582 | 582 | |
|
|
583 | 583 | if not(self.setNextFile()): |
|
|
584 | 584 | return 0 |
|
|
585 | 585 | |
|
|
586 | 586 | deltaTime = self.utc - self.lastUTTime |
|
|
587 | 587 | |
|
|
588 | 588 | self.flagTimeBlock = 0 |
|
|
589 | 589 | |
|
|
590 | 590 | if deltaTime > self.maxTimeStep: |
|
|
591 | 591 | self.flagTimeBlock = 1 |
|
|
592 | 592 | |
|
|
593 | 593 | return 1 |
|
|
594 | 594 | |
|
|
595 | 595 | |
|
|
596 | 596 | def readNextBlock(self): |
|
|
597 | 597 | if not(self.__setNewBlock()): |
|
|
598 | 598 | return 0 |
|
|
599 | 599 | |
|
|
600 | 600 | if not(self.readBlock()): |
|
|
601 | 601 | return 0 |
|
|
602 | 602 | |
|
|
603 | 603 | return 1 |
|
|
604 | 604 | |
|
|
605 | 605 | |
|
|
606 | 606 | def getData(self): |
|
|
607 | 607 | |
|
|
608 | 608 | if self.flagNoMoreFiles: |
|
|
609 | 609 | self.dataOut.flagNoData = True |
|
|
610 | 610 | print 'Process finished' |
|
|
611 | 611 | return 0 |
|
|
612 | 612 | |
|
|
613 | 613 | self.flagTimeBlock = 0 |
|
|
614 | 614 | self.flagIsNewBlock = 0 |
|
|
615 | 615 | |
|
|
616 | 616 | if not(self.readNextBlock()): |
|
|
617 | 617 | return 0 |
|
|
618 | 618 | |
|
|
619 | 619 | if self.data == None: |
|
|
620 | 620 | self.dataOut.flagNoData = True |
|
|
621 | 621 | return 0 |
|
|
622 | 622 | |
|
|
623 | 623 | self.dataOut.data = self.data |
|
|
624 | 624 | self.dataOut.data_header = self.data_header_dict |
|
|
625 | 625 | self.dataOut.utctime = self.utc |
|
|
626 | 626 | |
|
|
627 | 627 | self.dataOut.header = self.header_dict |
|
|
628 | 628 | self.dataOut.expName = self.expName |
|
|
629 | 629 | self.dataOut.nChannels = self.nChannels |
|
|
630 | 630 | self.dataOut.timeZone = self.timeZone |
|
|
631 | 631 | self.dataOut.dataBlocksPerFile = self.dataBlocksPerFile |
|
|
632 | 632 | self.dataOut.comments = self.comments |
|
|
633 | 633 | self.dataOut.timeInterval = self.timeInterval |
|
|
634 | 634 | self.dataOut.channelList = self.channelList |
|
|
635 | 635 | self.dataOut.heightList = self.heightList |
|
|
636 | 636 | self.dataOut.flagNoData = False |
|
|
637 | 637 | |
|
|
638 | 638 | return self.dataOut.data |
|
|
639 | 639 | |
|
|
640 | 640 | def run(self, **kwargs): |
|
|
641 | 641 | |
|
|
642 | 642 | if not(self.isConfig): |
|
|
643 | 643 | self.setup(**kwargs) |
|
|
644 | 644 | self.isConfig = True |
|
|
645 | 645 | |
|
|
646 | 646 | self.getData() |
|
|
647 | 647 | |
|
|
648 | 648 | class SpectraHeisWriter(Operation): |
|
|
649 | 649 | # set = None |
|
|
650 | 650 | setFile = None |
|
|
651 | 651 | idblock = None |
|
|
652 | 652 | doypath = None |
|
|
653 | 653 | subfolder = None |
|
|
654 | 654 | |
|
|
655 | 655 | def __init__(self): |
|
|
656 | 656 | self.wrObj = FITS() |
|
|
657 | 657 | # self.dataOut = dataOut |
|
|
658 | 658 | self.nTotalBlocks=0 |
|
|
659 | 659 | # self.set = None |
|
|
660 | 660 | self.setFile = None |
|
|
661 | 661 | self.idblock = 0 |
|
|
662 | 662 | self.wrpath = None |
|
|
663 | 663 | self.doypath = None |
|
|
664 | 664 | self.subfolder = None |
|
|
665 | 665 | self.isConfig = False |
|
|
666 | 666 | |
|
|
667 | 667 | def isNumber(str): |
|
|
668 | 668 | """ |
|
|
669 | 669 | Chequea si el conjunto de caracteres que componen un string puede ser convertidos a un numero. |
|
|
670 | 670 | |
|
|
671 | 671 | Excepciones: |
|
|
672 | 672 | Si un determinado string no puede ser convertido a numero |
|
|
673 | 673 | Input: |
|
|
674 | 674 | str, string al cual se le analiza para determinar si convertible a un numero o no |
|
|
675 | 675 | |
|
|
676 | 676 | Return: |
|
|
677 | 677 | True : si el string es uno numerico |
|
|
678 | 678 | False : no es un string numerico |
|
|
679 | 679 | """ |
|
|
680 | 680 | try: |
|
|
681 | 681 | float( str ) |
|
|
682 | 682 | return True |
|
|
683 | 683 | except: |
|
|
684 | 684 | return False |
|
|
685 | 685 | |
|
|
686 | 686 | def setup(self, dataOut, wrpath): |
|
|
687 | 687 | |
|
|
688 | 688 | if not(os.path.exists(wrpath)): |
|
|
689 | 689 | os.mkdir(wrpath) |
|
|
690 | 690 | |
|
|
691 | 691 | self.wrpath = wrpath |
|
|
692 | 692 | # self.setFile = 0 |
|
|
693 | 693 | self.dataOut = dataOut |
|
|
694 | 694 | |
|
|
695 | 695 | def putData(self): |
|
|
696 | 696 | name= time.localtime( self.dataOut.utctime) |
|
|
697 | 697 | ext=".fits" |
|
|
698 | 698 | |
|
|
699 | 699 | if self.doypath == None: |
|
|
700 | 700 | self.subfolder = 'F%4.4d%3.3d_%d' % (name.tm_year,name.tm_yday,time.mktime(datetime.datetime.now().timetuple())) |
|
|
701 | 701 | self.doypath = os.path.join( self.wrpath, self.subfolder ) |
|
|
702 | 702 | os.mkdir(self.doypath) |
|
|
703 | 703 | |
|
|
704 | 704 | if self.setFile == None: |
|
|
705 | 705 | # self.set = self.dataOut.set |
|
|
706 | 706 | self.setFile = 0 |
|
|
707 | 707 | # if self.set != self.dataOut.set: |
|
|
708 | 708 | ## self.set = self.dataOut.set |
|
|
709 | 709 | # self.setFile = 0 |
|
|
710 | 710 | |
|
|
711 | 711 | #make the filename |
|
|
712 | 712 | file = 'D%4.4d%3.3d_%3.3d%s' % (name.tm_year,name.tm_yday,self.setFile,ext) |
|
|
713 | 713 | |
|
|
714 | 714 | filename = os.path.join(self.wrpath,self.subfolder, file) |
|
|
715 | 715 | |
|
|
716 | 716 | idblock = numpy.array([self.idblock],dtype="int64") |
|
|
717 | 717 | header=self.wrObj.cFImage(idblock=idblock, |
|
|
718 | 718 | year=time.gmtime(self.dataOut.utctime).tm_year, |
|
|
719 | 719 | month=time.gmtime(self.dataOut.utctime).tm_mon, |
|
|
720 | 720 | day=time.gmtime(self.dataOut.utctime).tm_mday, |
|
|
721 | 721 | hour=time.gmtime(self.dataOut.utctime).tm_hour, |
|
|
722 | 722 | minute=time.gmtime(self.dataOut.utctime).tm_min, |
|
|
723 | 723 | second=time.gmtime(self.dataOut.utctime).tm_sec) |
|
|
724 | 724 | |
|
|
725 | 725 | c=3E8 |
|
|
726 | 726 | deltaHeight = self.dataOut.heightList[1] - self.dataOut.heightList[0] |
|
|
727 | 727 | freq=numpy.arange(-1*self.dataOut.nHeights/2.,self.dataOut.nHeights/2.)*(c/(2*deltaHeight*1000)) |
|
|
728 | 728 | |
|
|
729 | 729 | colList = [] |
|
|
730 | 730 | |
|
|
731 | 731 | colFreq=self.wrObj.setColF(name="freq", format=str(self.dataOut.nFFTPoints)+'E', array=freq) |
|
|
732 | 732 | |
|
|
733 | 733 | colList.append(colFreq) |
|
|
734 | 734 | |
|
|
735 | 735 | nchannel=self.dataOut.nChannels |
|
|
736 | 736 | |
|
|
737 | 737 | for i in range(nchannel): |
|
|
738 | 738 | col = self.wrObj.writeData(name="PCh"+str(i+1), |
|
|
739 | 739 | format=str(self.dataOut.nFFTPoints)+'E', |
|
|
740 | 740 | data=10*numpy.log10(self.dataOut.data_spc[i,:])) |
|
|
741 | 741 | |
|
|
742 | 742 | colList.append(col) |
|
|
743 | 743 | |
|
|
744 | 744 | data=self.wrObj.Ctable(colList=colList) |
|
|
745 | 745 | |
|
|
746 | 746 | self.wrObj.CFile(header,data) |
|
|
747 | 747 | |
|
|
748 | 748 | self.wrObj.wFile(filename) |
|
|
749 | 749 | |
|
|
750 | 750 | #update the setFile |
|
|
751 | 751 | self.setFile += 1 |
|
|
752 | 752 | self.idblock += 1 |
|
|
753 | 753 | |
|
|
754 | 754 | return 1 |
|
|
755 | 755 | |
|
|
756 | 756 | def run(self, dataOut, **kwargs): |
|
|
757 | 757 | |
|
|
758 | 758 | if not(self.isConfig): |
|
|
759 | 759 | |
|
|
760 | 760 | self.setup(dataOut, **kwargs) |
|
|
761 | 761 | self.isConfig = True |
|
|
762 | 762 | |
|
|
763 | 763 | self.putData() No newline at end of file |
| @@ -1,761 +1,761 | |||
|
|
1 | 1 | ''' |
|
|
2 | 2 | ''' |
|
|
3 | 3 | |
|
|
4 | 4 | import numpy |
|
|
5 | 5 | |
|
|
6 | 6 | from jroIO_base import LOCALTIME, JRODataReader, JRODataWriter |
|
|
7 | 7 | from model.proc.jroproc_base import ProcessingUnit, Operation |
|
|
8 | 8 | from model.data.jroheaderIO import PROCFLAG, BasicHeader, SystemHeader, RadarControllerHeader, ProcessingHeader |
|
|
9 | 9 | from model.data.jrodata import Spectra |
|
|
10 | 10 | |
|
|
11 | 11 | class SpectraReader(JRODataReader, ProcessingUnit): |
|
|
12 | 12 | """ |
|
|
13 | 13 | Esta clase permite leer datos de espectros desde archivos procesados (.pdata). La lectura |
|
|
14 | 14 | de los datos siempre se realiza por bloques. Los datos leidos (array de 3 dimensiones) |
|
|
15 | 15 | son almacenados en tres buffer's para el Self Spectra, el Cross Spectra y el DC Channel. |
|
|
16 | 16 | |
|
|
17 | 17 | paresCanalesIguales * alturas * perfiles (Self Spectra) |
|
|
18 | 18 | paresCanalesDiferentes * alturas * perfiles (Cross Spectra) |
|
|
19 | 19 | canales * alturas (DC Channels) |
|
|
20 | 20 | |
|
|
21 | 21 | Esta clase contiene instancias (objetos) de las clases BasicHeader, SystemHeader, |
|
|
22 | 22 | RadarControllerHeader y Spectra. Los tres primeros se usan para almacenar informacion de la |
|
|
23 | 23 | cabecera de datos (metadata), y el cuarto (Spectra) para obtener y almacenar un bloque de |
|
|
24 | 24 | datos desde el "buffer" cada vez que se ejecute el metodo "getData". |
|
|
25 | 25 | |
|
|
26 | 26 | Example: |
|
|
27 | 27 | dpath = "/home/myuser/data" |
|
|
28 | 28 | |
|
|
29 | 29 | startTime = datetime.datetime(2010,1,20,0,0,0,0,0,0) |
|
|
30 | 30 | |
|
|
31 | 31 | endTime = datetime.datetime(2010,1,21,23,59,59,0,0,0) |
|
|
32 | 32 | |
|
|
33 | 33 | readerObj = SpectraReader() |
|
|
34 | 34 | |
|
|
35 | 35 | readerObj.setup(dpath, startTime, endTime) |
|
|
36 | 36 | |
|
|
37 | 37 | while(True): |
|
|
38 | 38 | |
|
|
39 | 39 | readerObj.getData() |
|
|
40 | 40 | |
|
|
41 | 41 | print readerObj.data_spc |
|
|
42 | 42 | |
|
|
43 | 43 | print readerObj.data_cspc |
|
|
44 | 44 | |
|
|
45 | 45 | print readerObj.data_dc |
|
|
46 | 46 | |
|
|
47 | 47 | if readerObj.flagNoMoreFiles: |
|
|
48 | 48 | break |
|
|
49 | 49 | |
|
|
50 | 50 | """ |
|
|
51 | 51 | |
|
|
52 | 52 | pts2read_SelfSpectra = 0 |
|
|
53 | 53 | |
|
|
54 | 54 | pts2read_CrossSpectra = 0 |
|
|
55 | 55 | |
|
|
56 | 56 | pts2read_DCchannels = 0 |
|
|
57 | 57 | |
|
|
58 | 58 | ext = ".pdata" |
|
|
59 | 59 | |
|
|
60 | 60 | optchar = "P" |
|
|
61 | 61 | |
|
|
62 | 62 | dataOut = None |
|
|
63 | 63 | |
|
|
64 | 64 | nRdChannels = None |
|
|
65 | 65 | |
|
|
66 | 66 | nRdPairs = None |
|
|
67 | 67 | |
|
|
68 | 68 | rdPairList = [] |
|
|
69 | 69 | |
|
|
70 | 70 | def __init__(self): |
|
|
71 | 71 | """ |
|
|
72 | 72 | Inicializador de la clase SpectraReader para la lectura de datos de espectros. |
|
|
73 | 73 | |
|
|
74 | 74 | Inputs: |
|
|
75 | 75 | dataOut : Objeto de la clase Spectra. Este objeto sera utilizado para |
|
|
76 | 76 | almacenar un perfil de datos cada vez que se haga un requerimiento |
|
|
77 | 77 | (getData). El perfil sera obtenido a partir del buffer de datos, |
|
|
78 | 78 | si el buffer esta vacio se hara un nuevo proceso de lectura de un |
|
|
79 | 79 | bloque de datos. |
|
|
80 | 80 | Si este parametro no es pasado se creara uno internamente. |
|
|
81 | 81 | |
|
|
82 | 82 | Affected: |
|
|
83 | 83 | self.dataOut |
|
|
84 | 84 | |
|
|
85 | 85 | Return : None |
|
|
86 | 86 | """ |
|
|
87 | 87 | |
|
|
88 | 88 | #Eliminar de la base la herencia |
|
|
89 | 89 | ProcessingUnit.__init__(self) |
|
|
90 | 90 | |
|
|
91 | 91 | # self.isConfig = False |
|
|
92 | 92 | |
|
|
93 | 93 | self.pts2read_SelfSpectra = 0 |
|
|
94 | 94 | |
|
|
95 | 95 | self.pts2read_CrossSpectra = 0 |
|
|
96 | 96 | |
|
|
97 | 97 | self.pts2read_DCchannels = 0 |
|
|
98 | 98 | |
|
|
99 | 99 | self.datablock = None |
|
|
100 | 100 | |
|
|
101 | 101 | self.utc = None |
|
|
102 | 102 | |
|
|
103 | 103 | self.ext = ".pdata" |
|
|
104 | 104 | |
|
|
105 | 105 | self.optchar = "P" |
|
|
106 | 106 | |
|
|
107 | 107 | self.basicHeaderObj = BasicHeader(LOCALTIME) |
|
|
108 | 108 | |
|
|
109 | 109 | self.systemHeaderObj = SystemHeader() |
|
|
110 | 110 | |
|
|
111 | 111 | self.radarControllerHeaderObj = RadarControllerHeader() |
|
|
112 | 112 | |
|
|
113 | 113 | self.processingHeaderObj = ProcessingHeader() |
|
|
114 | 114 | |
|
|
115 | 115 | self.online = 0 |
|
|
116 | 116 | |
|
|
117 | 117 | self.fp = None |
|
|
118 | 118 | |
|
|
119 | 119 | self.idFile = None |
|
|
120 | 120 | |
|
|
121 | 121 | self.dtype = None |
|
|
122 | 122 | |
|
|
123 | 123 | self.fileSizeByHeader = None |
|
|
124 | 124 | |
|
|
125 | 125 | self.filenameList = [] |
|
|
126 | 126 | |
|
|
127 | 127 | self.filename = None |
|
|
128 | 128 | |
|
|
129 | 129 | self.fileSize = None |
|
|
130 | 130 | |
|
|
131 | 131 | self.firstHeaderSize = 0 |
|
|
132 | 132 | |
|
|
133 | 133 | self.basicHeaderSize = 24 |
|
|
134 | 134 | |
|
|
135 | 135 | self.pathList = [] |
|
|
136 | 136 | |
|
|
137 | 137 | self.lastUTTime = 0 |
|
|
138 | 138 | |
|
|
139 | 139 | self.maxTimeStep = 30 |
|
|
140 | 140 | |
|
|
141 | 141 | self.flagNoMoreFiles = 0 |
|
|
142 | 142 | |
|
|
143 | 143 | self.set = 0 |
|
|
144 | 144 | |
|
|
145 | 145 | self.path = None |
|
|
146 | 146 | |
|
|
147 | 147 | self.delay = 60 #seconds |
|
|
148 | 148 | |
|
|
149 | 149 | self.nTries = 3 #quantity tries |
|
|
150 | 150 | |
|
|
151 | 151 | self.nFiles = 3 #number of files for searching |
|
|
152 | 152 | |
|
|
153 | 153 | self.nReadBlocks = 0 |
|
|
154 | 154 | |
|
|
155 | 155 | self.flagIsNewFile = 1 |
|
|
156 | 156 | |
|
|
157 | 157 | self.__isFirstTimeOnline = 1 |
|
|
158 | 158 | |
|
|
159 | 159 | # self.ippSeconds = 0 |
|
|
160 | 160 | |
|
|
161 | 161 | self.flagTimeBlock = 0 |
|
|
162 | 162 | |
|
|
163 | 163 | self.flagIsNewBlock = 0 |
|
|
164 | 164 | |
|
|
165 | 165 | self.nTotalBlocks = 0 |
|
|
166 | 166 | |
|
|
167 | 167 | self.blocksize = 0 |
|
|
168 | 168 | |
|
|
169 | 169 | self.dataOut = self.createObjByDefault() |
|
|
170 | 170 | |
|
|
171 | 171 | self.profileIndex = 1 #Always |
|
|
172 | 172 | |
|
|
173 | 173 | |
|
|
174 | 174 | def createObjByDefault(self): |
|
|
175 | 175 | |
|
|
176 | 176 | dataObj = Spectra() |
|
|
177 | 177 | |
|
|
178 | 178 | return dataObj |
|
|
179 | 179 | |
|
|
180 | 180 | def __hasNotDataInBuffer(self): |
|
|
181 | 181 | return 1 |
|
|
182 | 182 | |
|
|
183 | 183 | |
|
|
184 | 184 | def getBlockDimension(self): |
|
|
185 | 185 | """ |
|
|
186 | 186 | Obtiene la cantidad de puntos a leer por cada bloque de datos |
|
|
187 | 187 | |
|
|
188 | 188 | Affected: |
|
|
189 | 189 | self.nRdChannels |
|
|
190 | 190 | self.nRdPairs |
|
|
191 | 191 | self.pts2read_SelfSpectra |
|
|
192 | 192 | self.pts2read_CrossSpectra |
|
|
193 | 193 | self.pts2read_DCchannels |
|
|
194 | 194 | self.blocksize |
|
|
195 | 195 | self.dataOut.nChannels |
|
|
196 | 196 | self.dataOut.nPairs |
|
|
197 | 197 | |
|
|
198 | 198 | Return: |
|
|
199 | 199 | None |
|
|
200 | 200 | """ |
|
|
201 | 201 | self.nRdChannels = 0 |
|
|
202 | 202 | self.nRdPairs = 0 |
|
|
203 | 203 | self.rdPairList = [] |
|
|
204 | 204 | |
|
|
205 | 205 | for i in range(0, self.processingHeaderObj.totalSpectra*2, 2): |
|
|
206 | 206 | if self.processingHeaderObj.spectraComb[i] == self.processingHeaderObj.spectraComb[i+1]: |
|
|
207 | 207 | self.nRdChannels = self.nRdChannels + 1 #par de canales iguales |
|
|
208 | 208 | else: |
|
|
209 | 209 | self.nRdPairs = self.nRdPairs + 1 #par de canales diferentes |
|
|
210 | 210 | self.rdPairList.append((self.processingHeaderObj.spectraComb[i], self.processingHeaderObj.spectraComb[i+1])) |
|
|
211 | 211 | |
|
|
212 | 212 | pts2read = self.processingHeaderObj.nHeights * self.processingHeaderObj.profilesPerBlock |
|
|
213 | 213 | |
|
|
214 | 214 | self.pts2read_SelfSpectra = int(self.nRdChannels * pts2read) |
|
|
215 | 215 | self.blocksize = self.pts2read_SelfSpectra |
|
|
216 | 216 | |
|
|
217 | 217 | if self.processingHeaderObj.flag_cspc: |
|
|
218 | 218 | self.pts2read_CrossSpectra = int(self.nRdPairs * pts2read) |
|
|
219 | 219 | self.blocksize += self.pts2read_CrossSpectra |
|
|
220 | 220 | |
|
|
221 | 221 | if self.processingHeaderObj.flag_dc: |
|
|
222 | 222 | self.pts2read_DCchannels = int(self.systemHeaderObj.nChannels * self.processingHeaderObj.nHeights) |
|
|
223 | 223 | self.blocksize += self.pts2read_DCchannels |
|
|
224 | 224 | |
|
|
225 | 225 | # self.blocksize = self.pts2read_SelfSpectra + self.pts2read_CrossSpectra + self.pts2read_DCchannels |
|
|
226 | 226 | |
|
|
227 | 227 | |
|
|
228 | 228 | def readBlock(self): |
|
|
229 | 229 | """ |
|
|
230 | 230 | Lee el bloque de datos desde la posicion actual del puntero del archivo |
|
|
231 | 231 | (self.fp) y actualiza todos los parametros relacionados al bloque de datos |
|
|
232 | 232 | (metadata + data). La data leida es almacenada en el buffer y el contador del buffer |
|
|
233 | 233 | es seteado a 0 |
|
|
234 | 234 | |
|
|
235 | 235 | Return: None |
|
|
236 | 236 | |
|
|
237 | 237 | Variables afectadas: |
|
|
238 | 238 | |
|
|
239 | 239 | self.flagIsNewFile |
|
|
240 | 240 | self.flagIsNewBlock |
|
|
241 | 241 | self.nTotalBlocks |
|
|
242 | 242 | self.data_spc |
|
|
243 | 243 | self.data_cspc |
|
|
244 | 244 | self.data_dc |
|
|
245 | 245 | |
|
|
246 | 246 | Exceptions: |
|
|
247 | 247 | Si un bloque leido no es un bloque valido |
|
|
248 | 248 | """ |
|
|
249 | 249 | blockOk_flag = False |
|
|
250 | 250 | fpointer = self.fp.tell() |
|
|
251 | 251 | |
|
|
252 | 252 | spc = numpy.fromfile( self.fp, self.dtype[0], self.pts2read_SelfSpectra ) |
|
|
253 | 253 | spc = spc.reshape( (self.nRdChannels, self.processingHeaderObj.nHeights, self.processingHeaderObj.profilesPerBlock) ) #transforma a un arreglo 3D |
|
|
254 | 254 | |
|
|
255 | 255 | if self.processingHeaderObj.flag_cspc: |
|
|
256 | 256 | cspc = numpy.fromfile( self.fp, self.dtype, self.pts2read_CrossSpectra ) |
|
|
257 | 257 | cspc = cspc.reshape( (self.nRdPairs, self.processingHeaderObj.nHeights, self.processingHeaderObj.profilesPerBlock) ) #transforma a un arreglo 3D |
|
|
258 | 258 | |
|
|
259 | 259 | if self.processingHeaderObj.flag_dc: |
|
|
260 | 260 | dc = numpy.fromfile( self.fp, self.dtype, self.pts2read_DCchannels ) #int(self.processingHeaderObj.nHeights*self.systemHeaderObj.nChannels) ) |
|
|
261 | 261 | dc = dc.reshape( (self.systemHeaderObj.nChannels, self.processingHeaderObj.nHeights) ) #transforma a un arreglo 2D |
|
|
262 | 262 | |
|
|
263 | 263 | |
|
|
264 | 264 | if not(self.processingHeaderObj.shif_fft): |
|
|
265 | 265 | #desplaza a la derecha en el eje 2 determinadas posiciones |
|
|
266 | 266 | shift = int(self.processingHeaderObj.profilesPerBlock/2) |
|
|
267 | 267 | spc = numpy.roll( spc, shift , axis=2 ) |
|
|
268 | 268 | |
|
|
269 | 269 | if self.processingHeaderObj.flag_cspc: |
|
|
270 | 270 | #desplaza a la derecha en el eje 2 determinadas posiciones |
|
|
271 | 271 | cspc = numpy.roll( cspc, shift, axis=2 ) |
|
|
272 | 272 | |
|
|
273 | 273 | # self.processingHeaderObj.shif_fft = True |
|
|
274 | 274 | |
|
|
275 | 275 | spc = numpy.transpose( spc, (0,2,1) ) |
|
|
276 | 276 | self.data_spc = spc |
|
|
277 | 277 | |
|
|
278 | 278 | if self.processingHeaderObj.flag_cspc: |
|
|
279 | 279 | cspc = numpy.transpose( cspc, (0,2,1) ) |
|
|
280 | 280 | self.data_cspc = cspc['real'] + cspc['imag']*1j |
|
|
281 | 281 | else: |
|
|
282 | 282 | self.data_cspc = None |
|
|
283 | 283 | |
|
|
284 | 284 | if self.processingHeaderObj.flag_dc: |
|
|
285 | 285 | self.data_dc = dc['real'] + dc['imag']*1j |
|
|
286 | 286 | else: |
|
|
287 | 287 | self.data_dc = None |
|
|
288 | 288 | |
|
|
289 | 289 | self.flagIsNewFile = 0 |
|
|
290 | 290 | self.flagIsNewBlock = 1 |
|
|
291 | 291 | |
|
|
292 | 292 | self.nTotalBlocks += 1 |
|
|
293 | 293 | self.nReadBlocks += 1 |
|
|
294 | 294 | |
|
|
295 | 295 | return 1 |
|
|
296 | 296 | |
|
|
297 | 297 | def getFirstHeader(self): |
|
|
298 | 298 | |
|
|
299 | 299 | self.dataOut.systemHeaderObj = self.systemHeaderObj.copy() |
|
|
300 | 300 | |
|
|
301 | 301 | self.dataOut.radarControllerHeaderObj = self.radarControllerHeaderObj.copy() |
|
|
302 | 302 | |
|
|
303 | 303 | # self.dataOut.ippSeconds = self.ippSeconds |
|
|
304 | 304 | |
|
|
305 | self.dataOut.timeInterval = self.radarControllerHeaderObj.ippSeconds * self.processingHeaderObj.nCohInt * self.processingHeaderObj.nIncohInt * self.processingHeaderObj.profilesPerBlock | |
|
|
305 | # self.dataOut.timeInterval = self.radarControllerHeaderObj.ippSeconds * self.processingHeaderObj.nCohInt * self.processingHeaderObj.nIncohInt * self.processingHeaderObj.profilesPerBlock | |
|
|
306 | 306 | |
|
|
307 | 307 | self.dataOut.dtype = self.dtype |
|
|
308 | 308 | |
|
|
309 | 309 | # self.dataOut.nPairs = self.nPairs |
|
|
310 | 310 | |
|
|
311 | 311 | self.dataOut.pairsList = self.rdPairList |
|
|
312 | 312 | |
|
|
313 | 313 | self.dataOut.nProfiles = self.processingHeaderObj.profilesPerBlock |
|
|
314 | 314 | |
|
|
315 | 315 | self.dataOut.nFFTPoints = self.processingHeaderObj.profilesPerBlock |
|
|
316 | 316 | |
|
|
317 | 317 | self.dataOut.nCohInt = self.processingHeaderObj.nCohInt |
|
|
318 | 318 | |
|
|
319 | 319 | self.dataOut.nIncohInt = self.processingHeaderObj.nIncohInt |
|
|
320 | 320 | |
|
|
321 | 321 | xf = self.processingHeaderObj.firstHeight + self.processingHeaderObj.nHeights*self.processingHeaderObj.deltaHeight |
|
|
322 | 322 | |
|
|
323 | 323 | self.dataOut.heightList = numpy.arange(self.processingHeaderObj.firstHeight, xf, self.processingHeaderObj.deltaHeight) |
|
|
324 | 324 | |
|
|
325 | 325 | self.dataOut.channelList = range(self.systemHeaderObj.nChannels) |
|
|
326 | 326 | |
|
|
327 | 327 | self.dataOut.flagShiftFFT = self.processingHeaderObj.shif_fft |
|
|
328 | 328 | |
|
|
329 | 329 | self.dataOut.flagDecodeData = False #asumo q la data no esta decodificada |
|
|
330 | 330 | |
|
|
331 | 331 | self.dataOut.flagDeflipData = True #asumo q la data no esta sin flip |
|
|
332 | 332 | |
|
|
333 | 333 | if self.radarControllerHeaderObj.code != None: |
|
|
334 | 334 | |
|
|
335 | 335 | self.dataOut.nCode = self.radarControllerHeaderObj.nCode |
|
|
336 | 336 | |
|
|
337 | 337 | self.dataOut.nBaud = self.radarControllerHeaderObj.nBaud |
|
|
338 | 338 | |
|
|
339 | 339 | self.dataOut.code = self.radarControllerHeaderObj.code |
|
|
340 | 340 | |
|
|
341 | 341 | self.dataOut.flagDecodeData = True |
|
|
342 | 342 | |
|
|
343 | 343 | def getData(self): |
|
|
344 | 344 | """ |
|
|
345 | 345 | First method to execute before "RUN" is called. |
|
|
346 | 346 | |
|
|
347 | 347 | Copia el buffer de lectura a la clase "Spectra", |
|
|
348 | 348 | con todos los parametros asociados a este (metadata). cuando no hay datos en el buffer de |
|
|
349 | 349 | lectura es necesario hacer una nueva lectura de los bloques de datos usando "readNextBlock" |
|
|
350 | 350 | |
|
|
351 | 351 | Return: |
|
|
352 | 352 | 0 : Si no hay mas archivos disponibles |
|
|
353 | 353 | 1 : Si hizo una buena copia del buffer |
|
|
354 | 354 | |
|
|
355 | 355 | Affected: |
|
|
356 | 356 | self.dataOut |
|
|
357 | 357 | |
|
|
358 | 358 | self.flagTimeBlock |
|
|
359 | 359 | self.flagIsNewBlock |
|
|
360 | 360 | """ |
|
|
361 | 361 | |
|
|
362 | 362 | if self.flagNoMoreFiles: |
|
|
363 | 363 | self.dataOut.flagNoData = True |
|
|
364 | 364 | print 'Process finished' |
|
|
365 | 365 | return 0 |
|
|
366 | 366 | |
|
|
367 | 367 | self.flagTimeBlock = 0 |
|
|
368 | 368 | self.flagIsNewBlock = 0 |
|
|
369 | 369 | |
|
|
370 | 370 | if self.__hasNotDataInBuffer(): |
|
|
371 | 371 | |
|
|
372 | 372 | if not( self.readNextBlock() ): |
|
|
373 | 373 | self.dataOut.flagNoData = True |
|
|
374 | 374 | return 0 |
|
|
375 | 375 | |
|
|
376 | 376 | #data es un numpy array de 3 dmensiones (perfiles, alturas y canales) |
|
|
377 | 377 | |
|
|
378 | 378 | if self.data_dc == None: |
|
|
379 | 379 | self.dataOut.flagNoData = True |
|
|
380 | 380 | return 0 |
|
|
381 | 381 | |
|
|
382 | 382 | self.getBasicHeader() |
|
|
383 | 383 | |
|
|
384 | 384 | self.getFirstHeader() |
|
|
385 | 385 | |
|
|
386 | 386 | self.dataOut.data_spc = self.data_spc |
|
|
387 | 387 | |
|
|
388 | 388 | self.dataOut.data_cspc = self.data_cspc |
|
|
389 | 389 | |
|
|
390 | 390 | self.dataOut.data_dc = self.data_dc |
|
|
391 | 391 | |
|
|
392 | 392 | self.dataOut.flagNoData = False |
|
|
393 | 393 | |
|
|
394 | 394 | self.dataOut.realtime = self.online |
|
|
395 | 395 | |
|
|
396 | 396 | return self.dataOut.data_spc |
|
|
397 | 397 | |
|
|
398 | 398 | class SpectraWriter(JRODataWriter, Operation): |
|
|
399 | 399 | |
|
|
400 | 400 | """ |
|
|
401 | 401 | Esta clase permite escribir datos de espectros a archivos procesados (.pdata). La escritura |
|
|
402 | 402 | de los datos siempre se realiza por bloques. |
|
|
403 | 403 | """ |
|
|
404 | 404 | |
|
|
405 | 405 | ext = ".pdata" |
|
|
406 | 406 | |
|
|
407 | 407 | optchar = "P" |
|
|
408 | 408 | |
|
|
409 | 409 | shape_spc_Buffer = None |
|
|
410 | 410 | |
|
|
411 | 411 | shape_cspc_Buffer = None |
|
|
412 | 412 | |
|
|
413 | 413 | shape_dc_Buffer = None |
|
|
414 | 414 | |
|
|
415 | 415 | data_spc = None |
|
|
416 | 416 | |
|
|
417 | 417 | data_cspc = None |
|
|
418 | 418 | |
|
|
419 | 419 | data_dc = None |
|
|
420 | 420 | |
|
|
421 | 421 | # dataOut = None |
|
|
422 | 422 | |
|
|
423 | 423 | def __init__(self): |
|
|
424 | 424 | """ |
|
|
425 | 425 | Inicializador de la clase SpectraWriter para la escritura de datos de espectros. |
|
|
426 | 426 | |
|
|
427 | 427 | Affected: |
|
|
428 | 428 | self.dataOut |
|
|
429 | 429 | self.basicHeaderObj |
|
|
430 | 430 | self.systemHeaderObj |
|
|
431 | 431 | self.radarControllerHeaderObj |
|
|
432 | 432 | self.processingHeaderObj |
|
|
433 | 433 | |
|
|
434 | 434 | Return: None |
|
|
435 | 435 | """ |
|
|
436 | 436 | |
|
|
437 | 437 | Operation.__init__(self) |
|
|
438 | 438 | |
|
|
439 | 439 | self.isConfig = False |
|
|
440 | 440 | |
|
|
441 | 441 | self.nTotalBlocks = 0 |
|
|
442 | 442 | |
|
|
443 | 443 | self.data_spc = None |
|
|
444 | 444 | |
|
|
445 | 445 | self.data_cspc = None |
|
|
446 | 446 | |
|
|
447 | 447 | self.data_dc = None |
|
|
448 | 448 | |
|
|
449 | 449 | self.fp = None |
|
|
450 | 450 | |
|
|
451 | 451 | self.flagIsNewFile = 1 |
|
|
452 | 452 | |
|
|
453 | 453 | self.nTotalBlocks = 0 |
|
|
454 | 454 | |
|
|
455 | 455 | self.flagIsNewBlock = 0 |
|
|
456 | 456 | |
|
|
457 | 457 | self.setFile = None |
|
|
458 | 458 | |
|
|
459 | 459 | self.dtype = None |
|
|
460 | 460 | |
|
|
461 | 461 | self.path = None |
|
|
462 | 462 | |
|
|
463 | 463 | self.noMoreFiles = 0 |
|
|
464 | 464 | |
|
|
465 | 465 | self.filename = None |
|
|
466 | 466 | |
|
|
467 | 467 | self.basicHeaderObj = BasicHeader(LOCALTIME) |
|
|
468 | 468 | |
|
|
469 | 469 | self.systemHeaderObj = SystemHeader() |
|
|
470 | 470 | |
|
|
471 | 471 | self.radarControllerHeaderObj = RadarControllerHeader() |
|
|
472 | 472 | |
|
|
473 | 473 | self.processingHeaderObj = ProcessingHeader() |
|
|
474 | 474 | |
|
|
475 | 475 | |
|
|
476 | 476 | def hasAllDataInBuffer(self): |
|
|
477 | 477 | return 1 |
|
|
478 | 478 | |
|
|
479 | 479 | |
|
|
480 | 480 | def setBlockDimension(self): |
|
|
481 | 481 | """ |
|
|
482 | 482 | Obtiene las formas dimensionales del los subbloques de datos que componen un bloque |
|
|
483 | 483 | |
|
|
484 | 484 | Affected: |
|
|
485 | 485 | self.shape_spc_Buffer |
|
|
486 | 486 | self.shape_cspc_Buffer |
|
|
487 | 487 | self.shape_dc_Buffer |
|
|
488 | 488 | |
|
|
489 | 489 | Return: None |
|
|
490 | 490 | """ |
|
|
491 | 491 | self.shape_spc_Buffer = (self.dataOut.nChannels, |
|
|
492 | 492 | self.processingHeaderObj.nHeights, |
|
|
493 | 493 | self.processingHeaderObj.profilesPerBlock) |
|
|
494 | 494 | |
|
|
495 | 495 | self.shape_cspc_Buffer = (self.dataOut.nPairs, |
|
|
496 | 496 | self.processingHeaderObj.nHeights, |
|
|
497 | 497 | self.processingHeaderObj.profilesPerBlock) |
|
|
498 | 498 | |
|
|
499 | 499 | self.shape_dc_Buffer = (self.dataOut.nChannels, |
|
|
500 | 500 | self.processingHeaderObj.nHeights) |
|
|
501 | 501 | |
|
|
502 | 502 | |
|
|
503 | 503 | def writeBlock(self): |
|
|
504 | 504 | """ |
|
|
505 | 505 | Escribe el buffer en el file designado |
|
|
506 | 506 | |
|
|
507 | 507 | Affected: |
|
|
508 | 508 | self.data_spc |
|
|
509 | 509 | self.data_cspc |
|
|
510 | 510 | self.data_dc |
|
|
511 | 511 | self.flagIsNewFile |
|
|
512 | 512 | self.flagIsNewBlock |
|
|
513 | 513 | self.nTotalBlocks |
|
|
514 | 514 | self.nWriteBlocks |
|
|
515 | 515 | |
|
|
516 | 516 | Return: None |
|
|
517 | 517 | """ |
|
|
518 | 518 | |
|
|
519 | 519 | spc = numpy.transpose( self.data_spc, (0,2,1) ) |
|
|
520 | 520 | if not( self.processingHeaderObj.shif_fft ): |
|
|
521 | 521 | spc = numpy.roll( spc, self.processingHeaderObj.profilesPerBlock/2, axis=2 ) #desplaza a la derecha en el eje 2 determinadas posiciones |
|
|
522 | 522 | data = spc.reshape((-1)) |
|
|
523 | 523 | data = data.astype(self.dtype[0]) |
|
|
524 | 524 | data.tofile(self.fp) |
|
|
525 | 525 | |
|
|
526 | 526 | if self.data_cspc != None: |
|
|
527 | 527 | data = numpy.zeros( self.shape_cspc_Buffer, self.dtype ) |
|
|
528 | 528 | cspc = numpy.transpose( self.data_cspc, (0,2,1) ) |
|
|
529 | 529 | if not( self.processingHeaderObj.shif_fft ): |
|
|
530 | 530 | cspc = numpy.roll( cspc, self.processingHeaderObj.profilesPerBlock/2, axis=2 ) #desplaza a la derecha en el eje 2 determinadas posiciones |
|
|
531 | 531 | data['real'] = cspc.real |
|
|
532 | 532 | data['imag'] = cspc.imag |
|
|
533 | 533 | data = data.reshape((-1)) |
|
|
534 | 534 | data.tofile(self.fp) |
|
|
535 | 535 | |
|
|
536 | 536 | if self.data_dc != None: |
|
|
537 | 537 | data = numpy.zeros( self.shape_dc_Buffer, self.dtype ) |
|
|
538 | 538 | dc = self.data_dc |
|
|
539 | 539 | data['real'] = dc.real |
|
|
540 | 540 | data['imag'] = dc.imag |
|
|
541 | 541 | data = data.reshape((-1)) |
|
|
542 | 542 | data.tofile(self.fp) |
|
|
543 | 543 | |
|
|
544 | 544 | self.data_spc.fill(0) |
|
|
545 | 545 | |
|
|
546 | 546 | if self.data_dc != None: |
|
|
547 | 547 | self.data_dc.fill(0) |
|
|
548 | 548 | |
|
|
549 | 549 | if self.data_cspc != None: |
|
|
550 | 550 | self.data_cspc.fill(0) |
|
|
551 | 551 | |
|
|
552 | 552 | self.flagIsNewFile = 0 |
|
|
553 | 553 | self.flagIsNewBlock = 1 |
|
|
554 | 554 | self.nTotalBlocks += 1 |
|
|
555 | 555 | self.nWriteBlocks += 1 |
|
|
556 | 556 | self.blockIndex += 1 |
|
|
557 | 557 | |
|
|
558 | 558 | |
|
|
559 | 559 | def putData(self): |
|
|
560 | 560 | """ |
|
|
561 | 561 | Setea un bloque de datos y luego los escribe en un file |
|
|
562 | 562 | |
|
|
563 | 563 | Affected: |
|
|
564 | 564 | self.data_spc |
|
|
565 | 565 | self.data_cspc |
|
|
566 | 566 | self.data_dc |
|
|
567 | 567 | |
|
|
568 | 568 | Return: |
|
|
569 | 569 | 0 : Si no hay data o no hay mas files que puedan escribirse |
|
|
570 | 570 | 1 : Si se escribio la data de un bloque en un file |
|
|
571 | 571 | """ |
|
|
572 | 572 | |
|
|
573 | 573 | if self.dataOut.flagNoData: |
|
|
574 | 574 | return 0 |
|
|
575 | 575 | |
|
|
576 | 576 | self.flagIsNewBlock = 0 |
|
|
577 | 577 | |
|
|
578 | 578 | if self.dataOut.flagTimeBlock: |
|
|
579 | 579 | self.data_spc.fill(0) |
|
|
580 | 580 | self.data_cspc.fill(0) |
|
|
581 | 581 | self.data_dc.fill(0) |
|
|
582 | 582 | self.setNextFile() |
|
|
583 | 583 | |
|
|
584 | 584 | if self.flagIsNewFile == 0: |
|
|
585 | 585 | self.setBasicHeader() |
|
|
586 | 586 | |
|
|
587 | 587 | self.data_spc = self.dataOut.data_spc.copy() |
|
|
588 | 588 | if self.dataOut.data_cspc != None: |
|
|
589 | 589 | self.data_cspc = self.dataOut.data_cspc.copy() |
|
|
590 | 590 | self.data_dc = self.dataOut.data_dc.copy() |
|
|
591 | 591 | |
|
|
592 | 592 | # #self.processingHeaderObj.dataBlocksPerFile) |
|
|
593 | 593 | if self.hasAllDataInBuffer(): |
|
|
594 | 594 | # self.setFirstHeader() |
|
|
595 | 595 | self.writeNextBlock() |
|
|
596 | 596 | |
|
|
597 | 597 | return 1 |
|
|
598 | 598 | |
|
|
599 | 599 | |
|
|
600 | 600 | def __getProcessFlags(self): |
|
|
601 | 601 | |
|
|
602 | 602 | processFlags = 0 |
|
|
603 | 603 | |
|
|
604 | 604 | dtype0 = numpy.dtype([('real','<i1'),('imag','<i1')]) |
|
|
605 | 605 | dtype1 = numpy.dtype([('real','<i2'),('imag','<i2')]) |
|
|
606 | 606 | dtype2 = numpy.dtype([('real','<i4'),('imag','<i4')]) |
|
|
607 | 607 | dtype3 = numpy.dtype([('real','<i8'),('imag','<i8')]) |
|
|
608 | 608 | dtype4 = numpy.dtype([('real','<f4'),('imag','<f4')]) |
|
|
609 | 609 | dtype5 = numpy.dtype([('real','<f8'),('imag','<f8')]) |
|
|
610 | 610 | |
|
|
611 | 611 | dtypeList = [dtype0, dtype1, dtype2, dtype3, dtype4, dtype5] |
|
|
612 | 612 | |
|
|
613 | 613 | |
|
|
614 | 614 | |
|
|
615 | 615 | datatypeValueList = [PROCFLAG.DATATYPE_CHAR, |
|
|
616 | 616 | PROCFLAG.DATATYPE_SHORT, |
|
|
617 | 617 | PROCFLAG.DATATYPE_LONG, |
|
|
618 | 618 | PROCFLAG.DATATYPE_INT64, |
|
|
619 | 619 | PROCFLAG.DATATYPE_FLOAT, |
|
|
620 | 620 | PROCFLAG.DATATYPE_DOUBLE] |
|
|
621 | 621 | |
|
|
622 | 622 | |
|
|
623 | 623 | for index in range(len(dtypeList)): |
|
|
624 | 624 | if self.dataOut.dtype == dtypeList[index]: |
|
|
625 | 625 | dtypeValue = datatypeValueList[index] |
|
|
626 | 626 | break |
|
|
627 | 627 | |
|
|
628 | 628 | processFlags += dtypeValue |
|
|
629 | 629 | |
|
|
630 | 630 | if self.dataOut.flagDecodeData: |
|
|
631 | 631 | processFlags += PROCFLAG.DECODE_DATA |
|
|
632 | 632 | |
|
|
633 | 633 | if self.dataOut.flagDeflipData: |
|
|
634 | 634 | processFlags += PROCFLAG.DEFLIP_DATA |
|
|
635 | 635 | |
|
|
636 | 636 | if self.dataOut.code != None: |
|
|
637 | 637 | processFlags += PROCFLAG.DEFINE_PROCESS_CODE |
|
|
638 | 638 | |
|
|
639 | 639 | if self.dataOut.nIncohInt > 1: |
|
|
640 | 640 | processFlags += PROCFLAG.INCOHERENT_INTEGRATION |
|
|
641 | 641 | |
|
|
642 | 642 | if self.dataOut.data_dc != None: |
|
|
643 | 643 | processFlags += PROCFLAG.SAVE_CHANNELS_DC |
|
|
644 | 644 | |
|
|
645 | 645 | return processFlags |
|
|
646 | 646 | |
|
|
647 | 647 | |
|
|
648 | 648 | def __getBlockSize(self): |
|
|
649 | 649 | ''' |
|
|
650 | 650 | Este metodos determina el cantidad de bytes para un bloque de datos de tipo Spectra |
|
|
651 | 651 | ''' |
|
|
652 | 652 | |
|
|
653 | 653 | dtype0 = numpy.dtype([('real','<i1'),('imag','<i1')]) |
|
|
654 | 654 | dtype1 = numpy.dtype([('real','<i2'),('imag','<i2')]) |
|
|
655 | 655 | dtype2 = numpy.dtype([('real','<i4'),('imag','<i4')]) |
|
|
656 | 656 | dtype3 = numpy.dtype([('real','<i8'),('imag','<i8')]) |
|
|
657 | 657 | dtype4 = numpy.dtype([('real','<f4'),('imag','<f4')]) |
|
|
658 | 658 | dtype5 = numpy.dtype([('real','<f8'),('imag','<f8')]) |
|
|
659 | 659 | |
|
|
660 | 660 | dtypeList = [dtype0, dtype1, dtype2, dtype3, dtype4, dtype5] |
|
|
661 | 661 | datatypeValueList = [1,2,4,8,4,8] |
|
|
662 | 662 | for index in range(len(dtypeList)): |
|
|
663 | 663 | if self.dataOut.dtype == dtypeList[index]: |
|
|
664 | 664 | datatypeValue = datatypeValueList[index] |
|
|
665 | 665 | break |
|
|
666 | 666 | |
|
|
667 | 667 | |
|
|
668 | 668 | pts2write = self.dataOut.nHeights * self.dataOut.nFFTPoints |
|
|
669 | 669 | |
|
|
670 | 670 | pts2write_SelfSpectra = int(self.dataOut.nChannels * pts2write) |
|
|
671 | 671 | blocksize = (pts2write_SelfSpectra*datatypeValue) |
|
|
672 | 672 | |
|
|
673 | 673 | if self.dataOut.data_cspc != None: |
|
|
674 | 674 | pts2write_CrossSpectra = int(self.dataOut.nPairs * pts2write) |
|
|
675 | 675 | blocksize += (pts2write_CrossSpectra*datatypeValue*2) |
|
|
676 | 676 | |
|
|
677 | 677 | if self.dataOut.data_dc != None: |
|
|
678 | 678 | pts2write_DCchannels = int(self.dataOut.nChannels * self.dataOut.nHeights) |
|
|
679 | 679 | blocksize += (pts2write_DCchannels*datatypeValue*2) |
|
|
680 | 680 | |
|
|
681 | 681 | blocksize = blocksize #* datatypeValue * 2 #CORREGIR ESTO |
|
|
682 | 682 | |
|
|
683 | 683 | return blocksize |
|
|
684 | 684 | |
|
|
685 | 685 | def setFirstHeader(self): |
|
|
686 | 686 | |
|
|
687 | 687 | """ |
|
|
688 | 688 | Obtiene una copia del First Header |
|
|
689 | 689 | |
|
|
690 | 690 | Affected: |
|
|
691 | 691 | self.systemHeaderObj |
|
|
692 | 692 | self.radarControllerHeaderObj |
|
|
693 | 693 | self.dtype |
|
|
694 | 694 | |
|
|
695 | 695 | Return: |
|
|
696 | 696 | None |
|
|
697 | 697 | """ |
|
|
698 | 698 | |
|
|
699 | 699 | self.systemHeaderObj = self.dataOut.systemHeaderObj.copy() |
|
|
700 | 700 | self.systemHeaderObj.nChannels = self.dataOut.nChannels |
|
|
701 | 701 | self.radarControllerHeaderObj = self.dataOut.radarControllerHeaderObj.copy() |
|
|
702 | 702 | old_code_size = self.dataOut.radarControllerHeaderObj.code_size |
|
|
703 | 703 | new_code_size = int(numpy.ceil(self.dataOut.nBaud/32.))*self.dataOut.nCode*4 |
|
|
704 | 704 | self.radarControllerHeaderObj.size = self.radarControllerHeaderObj.size - old_code_size + new_code_size |
|
|
705 | 705 | |
|
|
706 | 706 | self.setBasicHeader() |
|
|
707 | 707 | |
|
|
708 | 708 | processingHeaderSize = 40 # bytes |
|
|
709 | 709 | self.processingHeaderObj.dtype = 1 # Spectra |
|
|
710 | 710 | self.processingHeaderObj.blockSize = self.__getBlockSize() |
|
|
711 | 711 | self.processingHeaderObj.profilesPerBlock = self.dataOut.nFFTPoints |
|
|
712 | 712 | self.processingHeaderObj.dataBlocksPerFile = self.blocksPerFile |
|
|
713 | 713 | self.processingHeaderObj.nWindows = 1 #podria ser 1 o self.dataOut.processingHeaderObj.nWindows |
|
|
714 | 714 | self.processingHeaderObj.processFlags = self.__getProcessFlags() |
|
|
715 | 715 | self.processingHeaderObj.nCohInt = self.dataOut.nCohInt# Se requiere para determinar el valor de timeInterval |
|
|
716 | 716 | self.processingHeaderObj.nIncohInt = self.dataOut.nIncohInt |
|
|
717 | 717 | self.processingHeaderObj.totalSpectra = self.dataOut.nPairs + self.dataOut.nChannels |
|
|
718 | 718 | self.processingHeaderObj.shif_fft = self.dataOut.flagShiftFFT |
|
|
719 | 719 | |
|
|
720 | 720 | if self.processingHeaderObj.totalSpectra > 0: |
|
|
721 | 721 | channelList = [] |
|
|
722 | 722 | for channel in range(self.dataOut.nChannels): |
|
|
723 | 723 | channelList.append(channel) |
|
|
724 | 724 | channelList.append(channel) |
|
|
725 | 725 | |
|
|
726 | 726 | pairsList = [] |
|
|
727 | 727 | if self.dataOut.nPairs > 0: |
|
|
728 | 728 | for pair in self.dataOut.pairsList: |
|
|
729 | 729 | pairsList.append(pair[0]) |
|
|
730 | 730 | pairsList.append(pair[1]) |
|
|
731 | 731 | |
|
|
732 | 732 | spectraComb = channelList + pairsList |
|
|
733 | 733 | spectraComb = numpy.array(spectraComb,dtype="u1") |
|
|
734 | 734 | self.processingHeaderObj.spectraComb = spectraComb |
|
|
735 | 735 | sizeOfSpcComb = len(spectraComb) |
|
|
736 | 736 | processingHeaderSize += sizeOfSpcComb |
|
|
737 | 737 | |
|
|
738 | 738 | # The processing header should not have information about code |
|
|
739 | 739 | # if self.dataOut.code != None: |
|
|
740 | 740 | # self.processingHeaderObj.code = self.dataOut.code |
|
|
741 | 741 | # self.processingHeaderObj.nCode = self.dataOut.nCode |
|
|
742 | 742 | # self.processingHeaderObj.nBaud = self.dataOut.nBaud |
|
|
743 | 743 | # nCodeSize = 4 # bytes |
|
|
744 | 744 | # nBaudSize = 4 # bytes |
|
|
745 | 745 | # codeSize = 4 # bytes |
|
|
746 | 746 | # sizeOfCode = int(nCodeSize + nBaudSize + codeSize * self.dataOut.nCode * self.dataOut.nBaud) |
|
|
747 | 747 | # processingHeaderSize += sizeOfCode |
|
|
748 | 748 | |
|
|
749 | 749 | if self.processingHeaderObj.nWindows != 0: |
|
|
750 | 750 | self.processingHeaderObj.firstHeight = self.dataOut.heightList[0] |
|
|
751 | 751 | self.processingHeaderObj.deltaHeight = self.dataOut.heightList[1] - self.dataOut.heightList[0] |
|
|
752 | 752 | self.processingHeaderObj.nHeights = self.dataOut.nHeights |
|
|
753 | 753 | self.processingHeaderObj.samplesWin = self.dataOut.nHeights |
|
|
754 | 754 | sizeOfFirstHeight = 4 |
|
|
755 | 755 | sizeOfdeltaHeight = 4 |
|
|
756 | 756 | sizeOfnHeights = 4 |
|
|
757 | 757 | sizeOfWindows = (sizeOfFirstHeight + sizeOfdeltaHeight + sizeOfnHeights)*self.processingHeaderObj.nWindows |
|
|
758 | 758 | processingHeaderSize += sizeOfWindows |
|
|
759 | 759 | |
|
|
760 | 760 | self.processingHeaderObj.size = processingHeaderSize |
|
|
761 | 761 | |
| @@ -1,593 +1,609 | |||
|
|
1 | 1 | ''' |
|
|
2 | 2 | |
|
|
3 | 3 | ''' |
|
|
4 | 4 | import numpy |
|
|
5 | 5 | |
|
|
6 | 6 | from jroIO_base import LOCALTIME, JRODataReader, JRODataWriter |
|
|
7 | 7 | from model.proc.jroproc_base import ProcessingUnit, Operation |
|
|
8 | 8 | from model.data.jroheaderIO import PROCFLAG, BasicHeader, SystemHeader, RadarControllerHeader, ProcessingHeader |
|
|
9 | 9 | from model.data.jrodata import Voltage |
|
|
10 | 10 | |
|
|
11 | 11 | class VoltageReader(JRODataReader, ProcessingUnit): |
|
|
12 | 12 | """ |
|
|
13 | 13 | Esta clase permite leer datos de voltage desde archivos en formato rawdata (.r). La lectura |
|
|
14 | 14 | de los datos siempre se realiza por bloques. Los datos leidos (array de 3 dimensiones: |
|
|
15 | 15 | perfiles*alturas*canales) son almacenados en la variable "buffer". |
|
|
16 | 16 | |
|
|
17 | 17 | perfiles * alturas * canales |
|
|
18 | 18 | |
|
|
19 | 19 | Esta clase contiene instancias (objetos) de las clases BasicHeader, SystemHeader, |
|
|
20 | 20 | RadarControllerHeader y Voltage. Los tres primeros se usan para almacenar informacion de la |
|
|
21 | 21 | cabecera de datos (metadata), y el cuarto (Voltage) para obtener y almacenar un perfil de |
|
|
22 | 22 | datos desde el "buffer" cada vez que se ejecute el metodo "getData". |
|
|
23 | 23 | |
|
|
24 | 24 | Example: |
|
|
25 | 25 | |
|
|
26 | 26 | dpath = "/home/myuser/data" |
|
|
27 | 27 | |
|
|
28 | 28 | startTime = datetime.datetime(2010,1,20,0,0,0,0,0,0) |
|
|
29 | 29 | |
|
|
30 | 30 | endTime = datetime.datetime(2010,1,21,23,59,59,0,0,0) |
|
|
31 | 31 | |
|
|
32 | 32 | readerObj = VoltageReader() |
|
|
33 | 33 | |
|
|
34 | 34 | readerObj.setup(dpath, startTime, endTime) |
|
|
35 | 35 | |
|
|
36 | 36 | while(True): |
|
|
37 | 37 | |
|
|
38 | 38 | #to get one profile |
|
|
39 | 39 | profile = readerObj.getData() |
|
|
40 | 40 | |
|
|
41 | 41 | #print the profile |
|
|
42 | 42 | print profile |
|
|
43 | 43 | |
|
|
44 | 44 | #If you want to see all datablock |
|
|
45 | 45 | print readerObj.datablock |
|
|
46 | 46 | |
|
|
47 | 47 | if readerObj.flagNoMoreFiles: |
|
|
48 | 48 | break |
|
|
49 | 49 | |
|
|
50 | 50 | """ |
|
|
51 | 51 | |
|
|
52 | 52 | ext = ".r" |
|
|
53 | 53 | |
|
|
54 | 54 | optchar = "D" |
|
|
55 | 55 | dataOut = None |
|
|
56 | 56 | |
|
|
57 | 57 | |
|
|
58 | 58 | def __init__(self): |
|
|
59 | 59 | """ |
|
|
60 | 60 | Inicializador de la clase VoltageReader para la lectura de datos de voltage. |
|
|
61 | 61 | |
|
|
62 | 62 | Input: |
|
|
63 | 63 | dataOut : Objeto de la clase Voltage. Este objeto sera utilizado para |
|
|
64 | 64 | almacenar un perfil de datos cada vez que se haga un requerimiento |
|
|
65 | 65 | (getData). El perfil sera obtenido a partir del buffer de datos, |
|
|
66 | 66 | si el buffer esta vacio se hara un nuevo proceso de lectura de un |
|
|
67 | 67 | bloque de datos. |
|
|
68 | 68 | Si este parametro no es pasado se creara uno internamente. |
|
|
69 | 69 | |
|
|
70 | 70 | Variables afectadas: |
|
|
71 | 71 | self.dataOut |
|
|
72 | 72 | |
|
|
73 | 73 | Return: |
|
|
74 | 74 | None |
|
|
75 | 75 | """ |
|
|
76 | 76 | |
|
|
77 | 77 | ProcessingUnit.__init__(self) |
|
|
78 | 78 | |
|
|
79 | 79 | self.isConfig = False |
|
|
80 | 80 | |
|
|
81 | 81 | self.datablock = None |
|
|
82 | 82 | |
|
|
83 | 83 | self.utc = 0 |
|
|
84 | 84 | |
|
|
85 | 85 | self.ext = ".r" |
|
|
86 | 86 | |
|
|
87 | 87 | self.optchar = "D" |
|
|
88 | 88 | |
|
|
89 | 89 | self.basicHeaderObj = BasicHeader(LOCALTIME) |
|
|
90 | 90 | |
|
|
91 | 91 | self.systemHeaderObj = SystemHeader() |
|
|
92 | 92 | |
|
|
93 | 93 | self.radarControllerHeaderObj = RadarControllerHeader() |
|
|
94 | 94 | |
|
|
95 | 95 | self.processingHeaderObj = ProcessingHeader() |
|
|
96 | 96 | |
|
|
97 | 97 | self.online = 0 |
|
|
98 | 98 | |
|
|
99 | 99 | self.fp = None |
|
|
100 | 100 | |
|
|
101 | 101 | self.idFile = None |
|
|
102 | 102 | |
|
|
103 | 103 | self.dtype = None |
|
|
104 | 104 | |
|
|
105 | 105 | self.fileSizeByHeader = None |
|
|
106 | 106 | |
|
|
107 | 107 | self.filenameList = [] |
|
|
108 | 108 | |
|
|
109 | 109 | self.filename = None |
|
|
110 | 110 | |
|
|
111 | 111 | self.fileSize = None |
|
|
112 | 112 | |
|
|
113 | 113 | self.firstHeaderSize = 0 |
|
|
114 | 114 | |
|
|
115 | 115 | self.basicHeaderSize = 24 |
|
|
116 | 116 | |
|
|
117 | 117 | self.pathList = [] |
|
|
118 | 118 | |
|
|
119 | 119 | self.filenameList = [] |
|
|
120 | 120 | |
|
|
121 | 121 | self.lastUTTime = 0 |
|
|
122 | 122 | |
|
|
123 | 123 | self.maxTimeStep = 30 |
|
|
124 | 124 | |
|
|
125 | 125 | self.flagNoMoreFiles = 0 |
|
|
126 | 126 | |
|
|
127 | 127 | self.set = 0 |
|
|
128 | 128 | |
|
|
129 | 129 | self.path = None |
|
|
130 | 130 | |
|
|
131 | 131 | self.profileIndex = 2**32-1 |
|
|
132 | 132 | |
|
|
133 | 133 | self.delay = 3 #seconds |
|
|
134 | 134 | |
|
|
135 | 135 | self.nTries = 3 #quantity tries |
|
|
136 | 136 | |
|
|
137 | 137 | self.nFiles = 3 #number of files for searching |
|
|
138 | 138 | |
|
|
139 | 139 | self.nReadBlocks = 0 |
|
|
140 | 140 | |
|
|
141 | 141 | self.flagIsNewFile = 1 |
|
|
142 | 142 | |
|
|
143 | 143 | self.__isFirstTimeOnline = 1 |
|
|
144 | 144 | |
|
|
145 | 145 | # self.ippSeconds = 0 |
|
|
146 | 146 | |
|
|
147 | 147 | self.flagTimeBlock = 0 |
|
|
148 | 148 | |
|
|
149 | 149 | self.flagIsNewBlock = 0 |
|
|
150 | 150 | |
|
|
151 | 151 | self.nTotalBlocks = 0 |
|
|
152 | 152 | |
|
|
153 | 153 | self.blocksize = 0 |
|
|
154 | 154 | |
|
|
155 | 155 | self.dataOut = self.createObjByDefault() |
|
|
156 | 156 | |
|
|
157 | 157 | def createObjByDefault(self): |
|
|
158 | 158 | |
|
|
159 | 159 | dataObj = Voltage() |
|
|
160 | 160 | |
|
|
161 | 161 | return dataObj |
|
|
162 | 162 | |
|
|
163 | 163 | def __hasNotDataInBuffer(self): |
|
|
164 | 164 | if self.profileIndex >= self.processingHeaderObj.profilesPerBlock: |
|
|
165 | 165 | return 1 |
|
|
166 | 166 | return 0 |
|
|
167 | 167 | |
|
|
168 | 168 | |
|
|
169 | 169 | def getBlockDimension(self): |
|
|
170 | 170 | """ |
|
|
171 | 171 | Obtiene la cantidad de puntos a leer por cada bloque de datos |
|
|
172 | 172 | |
|
|
173 | 173 | Affected: |
|
|
174 | 174 | self.blocksize |
|
|
175 | 175 | |
|
|
176 | 176 | Return: |
|
|
177 | 177 | None |
|
|
178 | 178 | """ |
|
|
179 | 179 | pts2read = self.processingHeaderObj.profilesPerBlock * self.processingHeaderObj.nHeights * self.systemHeaderObj.nChannels |
|
|
180 | 180 | self.blocksize = pts2read |
|
|
181 | 181 | |
|
|
182 | 182 | |
|
|
183 | 183 | def readBlock(self): |
|
|
184 | 184 | """ |
|
|
185 | 185 | readBlock lee el bloque de datos desde la posicion actual del puntero del archivo |
|
|
186 | 186 | (self.fp) y actualiza todos los parametros relacionados al bloque de datos |
|
|
187 | 187 | (metadata + data). La data leida es almacenada en el buffer y el contador del buffer |
|
|
188 | 188 | es seteado a 0 |
|
|
189 | 189 | |
|
|
190 | 190 | Inputs: |
|
|
191 | 191 | None |
|
|
192 | 192 | |
|
|
193 | 193 | Return: |
|
|
194 | 194 | None |
|
|
195 | 195 | |
|
|
196 | 196 | Affected: |
|
|
197 | 197 | self.profileIndex |
|
|
198 | 198 | self.datablock |
|
|
199 | 199 | self.flagIsNewFile |
|
|
200 | 200 | self.flagIsNewBlock |
|
|
201 | 201 | self.nTotalBlocks |
|
|
202 | 202 | |
|
|
203 | 203 | Exceptions: |
|
|
204 | 204 | Si un bloque leido no es un bloque valido |
|
|
205 | 205 | """ |
|
|
206 | 206 | current_pointer_location = self.fp.tell() |
|
|
207 | 207 | junk = numpy.fromfile( self.fp, self.dtype, self.blocksize ) |
|
|
208 | 208 | |
|
|
209 | 209 | try: |
|
|
210 | 210 | junk = junk.reshape( (self.processingHeaderObj.profilesPerBlock, self.processingHeaderObj.nHeights, self.systemHeaderObj.nChannels) ) |
|
|
211 | 211 | except: |
|
|
212 | 212 | #print "The read block (%3d) has not enough data" %self.nReadBlocks |
|
|
213 | 213 | |
|
|
214 | 214 | if self.waitDataBlock(pointer_location=current_pointer_location): |
|
|
215 | 215 | junk = numpy.fromfile( self.fp, self.dtype, self.blocksize ) |
|
|
216 | 216 | junk = junk.reshape( (self.processingHeaderObj.profilesPerBlock, self.processingHeaderObj.nHeights, self.systemHeaderObj.nChannels) ) |
|
|
217 | 217 | # return 0 |
|
|
218 | 218 | |
|
|
219 | 219 | junk = numpy.transpose(junk, (2,0,1)) |
|
|
220 | 220 | self.datablock = junk['real'] + junk['imag']*1j |
|
|
221 | 221 | |
|
|
222 | 222 | self.profileIndex = 0 |
|
|
223 | 223 | |
|
|
224 | 224 | self.flagIsNewFile = 0 |
|
|
225 | 225 | self.flagIsNewBlock = 1 |
|
|
226 | 226 | |
|
|
227 | 227 | self.nTotalBlocks += 1 |
|
|
228 | 228 | self.nReadBlocks += 1 |
|
|
229 | 229 | |
|
|
230 | 230 | return 1 |
|
|
231 | 231 | |
|
|
232 | 232 | def getFirstHeader(self): |
|
|
233 | 233 | |
|
|
234 | 234 | self.dataOut.systemHeaderObj = self.systemHeaderObj.copy() |
|
|
235 | 235 | |
|
|
236 | 236 | self.dataOut.radarControllerHeaderObj = self.radarControllerHeaderObj.copy() |
|
|
237 | 237 | |
|
|
238 | 238 | # self.dataOut.ippSeconds = self.ippSeconds |
|
|
239 | 239 | |
|
|
240 | self.dataOut.timeInterval = self.radarControllerHeaderObj.ippSeconds * self.processingHeaderObj.nCohInt | |
|
|
240 | # self.dataOut.timeInterval = self.radarControllerHeaderObj.ippSeconds * self.processingHeaderObj.nCohInt | |
|
|
241 | 241 | |
|
|
242 | 242 | if self.radarControllerHeaderObj.code != None: |
|
|
243 | 243 | |
|
|
244 | 244 | self.dataOut.nCode = self.radarControllerHeaderObj.nCode |
|
|
245 | 245 | |
|
|
246 | 246 | self.dataOut.nBaud = self.radarControllerHeaderObj.nBaud |
|
|
247 | 247 | |
|
|
248 | 248 | self.dataOut.code = self.radarControllerHeaderObj.code |
|
|
249 | 249 | |
|
|
250 | 250 | self.dataOut.dtype = self.dtype |
|
|
251 | 251 | |
|
|
252 | 252 | self.dataOut.nProfiles = self.processingHeaderObj.profilesPerBlock |
|
|
253 | 253 | |
|
|
254 | 254 | xf = self.processingHeaderObj.firstHeight + self.processingHeaderObj.nHeights*self.processingHeaderObj.deltaHeight |
|
|
255 | 255 | |
|
|
256 | 256 | self.dataOut.heightList = numpy.arange(self.processingHeaderObj.firstHeight, xf, self.processingHeaderObj.deltaHeight) |
|
|
257 | 257 | |
|
|
258 | 258 | self.dataOut.channelList = range(self.systemHeaderObj.nChannels) |
|
|
259 | 259 | |
|
|
260 | 260 | self.dataOut.nCohInt = self.processingHeaderObj.nCohInt |
|
|
261 | 261 | |
|
|
262 | 262 | self.dataOut.flagShiftFFT = False |
|
|
263 | 263 | |
|
|
264 | 264 | self.dataOut.flagDecodeData = False #asumo q la data no esta decodificada |
|
|
265 | 265 | |
|
|
266 | 266 | self.dataOut.flagDeflipData = False #asumo q la data no esta sin flip |
|
|
267 | 267 | |
|
|
268 | 268 | self.dataOut.flagShiftFFT = False |
|
|
269 | 269 | |
|
|
270 | 270 | def getData(self): |
|
|
271 | 271 | """ |
|
|
272 |
getData obtiene una unidad de datos del buffer de lectura y la copia a |
|
|
|
273 |
con todos los parametros asociados a este (metadata). cuando no hay datos |
|
|
|
274 |
lectura es necesario hacer una nueva lectura de los bloques de datos usando |
|
|
|
272 | getData obtiene una unidad de datos del buffer de lectura, un perfil, y la copia al objeto self.dataOut | |
|
|
273 | del tipo "Voltage" con todos los parametros asociados a este (metadata). cuando no hay datos | |
|
|
274 | en el buffer de lectura es necesario hacer una nueva lectura de los bloques de datos usando | |
|
|
275 | "readNextBlock" | |
|
|
275 | 276 | |
|
|
276 | Ademas incrementa el contador del buffer en 1. | |
|
|
277 | Ademas incrementa el contador del buffer "self.profileIndex" en 1. | |
|
|
277 | 278 | |
|
|
278 | 279 | Return: |
|
|
279 | data : retorna un perfil de voltages (alturas * canales) copiados desde el | |
|
|
280 | buffer. Si no hay mas archivos a leer retorna None. | |
|
|
280 | ||
|
|
281 | Si el flag self.getByBlock ha sido seteado el bloque completo es copiado a self.dataOut y el self.profileIndex | |
|
|
282 | es igual al total de perfiles leidos desde el archivo. | |
|
|
283 | ||
|
|
284 | Si self.getByBlock == False: | |
|
|
285 | ||
|
|
286 | self.dataOut.data = buffer[:, thisProfile, :] | |
|
|
287 | ||
|
|
288 | shape = [nChannels, nHeis] | |
|
|
289 | ||
|
|
290 | Si self.getByBlock == True: | |
|
|
291 | ||
|
|
292 | self.dataOut.data = buffer[:, :, :] | |
|
|
293 | ||
|
|
294 | shape = [nChannels, nProfiles, nHeis] | |
|
|
281 | 295 | |
|
|
282 | 296 | Variables afectadas: |
|
|
283 | 297 | self.dataOut |
|
|
284 | 298 | self.profileIndex |
|
|
285 | 299 | |
|
|
286 | 300 | Affected: |
|
|
287 | 301 | self.dataOut |
|
|
288 | 302 | self.profileIndex |
|
|
289 | 303 | self.flagTimeBlock |
|
|
290 | 304 | self.flagIsNewBlock |
|
|
291 | 305 | """ |
|
|
292 | 306 | |
|
|
293 | 307 | if self.flagNoMoreFiles: |
|
|
294 | 308 | self.dataOut.flagNoData = True |
|
|
295 | 309 | print 'Process finished' |
|
|
296 | 310 | return 0 |
|
|
297 | 311 | |
|
|
298 | 312 | self.flagTimeBlock = 0 |
|
|
299 | 313 | self.flagIsNewBlock = 0 |
|
|
300 | 314 | |
|
|
301 | 315 | if self.__hasNotDataInBuffer(): |
|
|
302 | 316 | |
|
|
303 | 317 | if not( self.readNextBlock() ): |
|
|
304 | 318 | return 0 |
|
|
305 | 319 | |
|
|
306 | 320 | self.getFirstHeader() |
|
|
307 | 321 | |
|
|
308 | 322 | if self.datablock == None: |
|
|
309 | 323 | self.dataOut.flagNoData = True |
|
|
310 | 324 | return 0 |
|
|
311 | 325 | |
|
|
312 |
if self.get |
|
|
|
326 | if self.getByBlock: | |
|
|
327 | self.dataOut.flagDataAsBlock = True | |
|
|
313 | 328 | self.dataOut.data = self.datablock |
|
|
314 | 329 | self.profileIndex = self.processingHeaderObj.profilesPerBlock |
|
|
315 | 330 | else: |
|
|
331 | self.dataOut.flagDataAsBlock = False | |
|
|
316 | 332 | self.dataOut.data = self.datablock[:,self.profileIndex,:] |
|
|
317 | 333 | self.profileIndex += 1 |
|
|
318 | 334 | |
|
|
319 | 335 | self.dataOut.flagNoData = False |
|
|
320 | 336 | |
|
|
321 | 337 | self.getBasicHeader() |
|
|
322 | 338 | |
|
|
323 | 339 | |
|
|
324 | 340 | |
|
|
325 | 341 | self.dataOut.realtime = self.online |
|
|
326 | 342 | |
|
|
327 | 343 | return self.dataOut.data |
|
|
328 | 344 | |
|
|
329 | 345 | class VoltageWriter(JRODataWriter, Operation): |
|
|
330 | 346 | """ |
|
|
331 | 347 | Esta clase permite escribir datos de voltajes a archivos procesados (.r). La escritura |
|
|
332 | 348 | de los datos siempre se realiza por bloques. |
|
|
333 | 349 | """ |
|
|
334 | 350 | |
|
|
335 | 351 | ext = ".r" |
|
|
336 | 352 | |
|
|
337 | 353 | optchar = "D" |
|
|
338 | 354 | |
|
|
339 | 355 | shapeBuffer = None |
|
|
340 | 356 | |
|
|
341 | 357 | |
|
|
342 | 358 | def __init__(self): |
|
|
343 | 359 | """ |
|
|
344 | 360 | Inicializador de la clase VoltageWriter para la escritura de datos de espectros. |
|
|
345 | 361 | |
|
|
346 | 362 | Affected: |
|
|
347 | 363 | self.dataOut |
|
|
348 | 364 | |
|
|
349 | 365 | Return: None |
|
|
350 | 366 | """ |
|
|
351 | 367 | Operation.__init__(self) |
|
|
352 | 368 | |
|
|
353 | 369 | self.nTotalBlocks = 0 |
|
|
354 | 370 | |
|
|
355 | 371 | self.profileIndex = 0 |
|
|
356 | 372 | |
|
|
357 | 373 | self.isConfig = False |
|
|
358 | 374 | |
|
|
359 | 375 | self.fp = None |
|
|
360 | 376 | |
|
|
361 | 377 | self.flagIsNewFile = 1 |
|
|
362 | 378 | |
|
|
363 | 379 | self.nTotalBlocks = 0 |
|
|
364 | 380 | |
|
|
365 | 381 | self.flagIsNewBlock = 0 |
|
|
366 | 382 | |
|
|
367 | 383 | self.setFile = None |
|
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368 | 384 | |
|
|
369 | 385 | self.dtype = None |
|
|
370 | 386 | |
|
|
371 | 387 | self.path = None |
|
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372 | 388 | |
|
|
373 | 389 | self.filename = None |
|
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374 | 390 | |
|
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375 | 391 | self.basicHeaderObj = BasicHeader(LOCALTIME) |
|
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376 | 392 | |
|
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377 | 393 | self.systemHeaderObj = SystemHeader() |
|
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378 | 394 | |
|
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379 | 395 | self.radarControllerHeaderObj = RadarControllerHeader() |
|
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380 | 396 | |
|
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381 | 397 | self.processingHeaderObj = ProcessingHeader() |
|
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382 | 398 | |
|
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383 | 399 | def hasAllDataInBuffer(self): |
|
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384 | 400 | if self.profileIndex >= self.processingHeaderObj.profilesPerBlock: |
|
|
385 | 401 | return 1 |
|
|
386 | 402 | return 0 |
|
|
387 | 403 | |
|
|
388 | 404 | |
|
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389 | 405 | def setBlockDimension(self): |
|
|
390 | 406 | """ |
|
|
391 | 407 | Obtiene las formas dimensionales del los subbloques de datos que componen un bloque |
|
|
392 | 408 | |
|
|
393 | 409 | Affected: |
|
|
394 | 410 | self.shape_spc_Buffer |
|
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395 | 411 | self.shape_cspc_Buffer |
|
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396 | 412 | self.shape_dc_Buffer |
|
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397 | 413 | |
|
|
398 | 414 | Return: None |
|
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399 | 415 | """ |
|
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400 | 416 | self.shapeBuffer = (self.processingHeaderObj.profilesPerBlock, |
|
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401 | 417 | self.processingHeaderObj.nHeights, |
|
|
402 | 418 | self.systemHeaderObj.nChannels) |
|
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403 | 419 | |
|
|
404 | 420 | self.datablock = numpy.zeros((self.systemHeaderObj.nChannels, |
|
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405 | 421 | self.processingHeaderObj.profilesPerBlock, |
|
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406 | 422 | self.processingHeaderObj.nHeights), |
|
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407 | 423 | dtype=numpy.dtype('complex64')) |
|
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408 | 424 | |
|
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409 | 425 | |
|
|
410 | 426 | def writeBlock(self): |
|
|
411 | 427 | """ |
|
|
412 | 428 | Escribe el buffer en el file designado |
|
|
413 | 429 | |
|
|
414 | 430 | Affected: |
|
|
415 | 431 | self.profileIndex |
|
|
416 | 432 | self.flagIsNewFile |
|
|
417 | 433 | self.flagIsNewBlock |
|
|
418 | 434 | self.nTotalBlocks |
|
|
419 | 435 | self.blockIndex |
|
|
420 | 436 | |
|
|
421 | 437 | Return: None |
|
|
422 | 438 | """ |
|
|
423 | 439 | data = numpy.zeros( self.shapeBuffer, self.dtype ) |
|
|
424 | 440 | |
|
|
425 | 441 | junk = numpy.transpose(self.datablock, (1,2,0)) |
|
|
426 | 442 | |
|
|
427 | 443 | data['real'] = junk.real |
|
|
428 | 444 | data['imag'] = junk.imag |
|
|
429 | 445 | |
|
|
430 | 446 | data = data.reshape( (-1) ) |
|
|
431 | 447 | |
|
|
432 | 448 | data.tofile( self.fp ) |
|
|
433 | 449 | |
|
|
434 | 450 | self.datablock.fill(0) |
|
|
435 | 451 | |
|
|
436 | 452 | self.profileIndex = 0 |
|
|
437 | 453 | self.flagIsNewFile = 0 |
|
|
438 | 454 | self.flagIsNewBlock = 1 |
|
|
439 | 455 | |
|
|
440 | 456 | self.blockIndex += 1 |
|
|
441 | 457 | self.nTotalBlocks += 1 |
|
|
442 | 458 | |
|
|
443 | 459 | def putData(self): |
|
|
444 | 460 | """ |
|
|
445 | 461 | Setea un bloque de datos y luego los escribe en un file |
|
|
446 | 462 | |
|
|
447 | 463 | Affected: |
|
|
448 | 464 | self.flagIsNewBlock |
|
|
449 | 465 | self.profileIndex |
|
|
450 | 466 | |
|
|
451 | 467 | Return: |
|
|
452 | 468 | 0 : Si no hay data o no hay mas files que puedan escribirse |
|
|
453 | 469 | 1 : Si se escribio la data de un bloque en un file |
|
|
454 | 470 | """ |
|
|
455 | 471 | if self.dataOut.flagNoData: |
|
|
456 | 472 | return 0 |
|
|
457 | 473 | |
|
|
458 | 474 | self.flagIsNewBlock = 0 |
|
|
459 | 475 | |
|
|
460 | 476 | if self.dataOut.flagTimeBlock: |
|
|
461 | 477 | |
|
|
462 | 478 | self.datablock.fill(0) |
|
|
463 | 479 | self.profileIndex = 0 |
|
|
464 | 480 | self.setNextFile() |
|
|
465 | 481 | |
|
|
466 | 482 | if self.profileIndex == 0: |
|
|
467 | 483 | self.setBasicHeader() |
|
|
468 | 484 | |
|
|
469 | 485 | self.datablock[:,self.profileIndex,:] = self.dataOut.data |
|
|
470 | 486 | |
|
|
471 | 487 | self.profileIndex += 1 |
|
|
472 | 488 | |
|
|
473 | 489 | if self.hasAllDataInBuffer(): |
|
|
474 | 490 | #if self.flagIsNewFile: |
|
|
475 | 491 | self.writeNextBlock() |
|
|
476 | 492 | # self.setFirstHeader() |
|
|
477 | 493 | |
|
|
478 | 494 | return 1 |
|
|
479 | 495 | |
|
|
480 | 496 | def __getProcessFlags(self): |
|
|
481 | 497 | |
|
|
482 | 498 | processFlags = 0 |
|
|
483 | 499 | |
|
|
484 | 500 | dtype0 = numpy.dtype([('real','<i1'),('imag','<i1')]) |
|
|
485 | 501 | dtype1 = numpy.dtype([('real','<i2'),('imag','<i2')]) |
|
|
486 | 502 | dtype2 = numpy.dtype([('real','<i4'),('imag','<i4')]) |
|
|
487 | 503 | dtype3 = numpy.dtype([('real','<i8'),('imag','<i8')]) |
|
|
488 | 504 | dtype4 = numpy.dtype([('real','<f4'),('imag','<f4')]) |
|
|
489 | 505 | dtype5 = numpy.dtype([('real','<f8'),('imag','<f8')]) |
|
|
490 | 506 | |
|
|
491 | 507 | dtypeList = [dtype0, dtype1, dtype2, dtype3, dtype4, dtype5] |
|
|
492 | 508 | |
|
|
493 | 509 | |
|
|
494 | 510 | |
|
|
495 | 511 | datatypeValueList = [PROCFLAG.DATATYPE_CHAR, |
|
|
496 | 512 | PROCFLAG.DATATYPE_SHORT, |
|
|
497 | 513 | PROCFLAG.DATATYPE_LONG, |
|
|
498 | 514 | PROCFLAG.DATATYPE_INT64, |
|
|
499 | 515 | PROCFLAG.DATATYPE_FLOAT, |
|
|
500 | 516 | PROCFLAG.DATATYPE_DOUBLE] |
|
|
501 | 517 | |
|
|
502 | 518 | |
|
|
503 | 519 | for index in range(len(dtypeList)): |
|
|
504 | 520 | if self.dataOut.dtype == dtypeList[index]: |
|
|
505 | 521 | dtypeValue = datatypeValueList[index] |
|
|
506 | 522 | break |
|
|
507 | 523 | |
|
|
508 | 524 | processFlags += dtypeValue |
|
|
509 | 525 | |
|
|
510 | 526 | if self.dataOut.flagDecodeData: |
|
|
511 | 527 | processFlags += PROCFLAG.DECODE_DATA |
|
|
512 | 528 | |
|
|
513 | 529 | if self.dataOut.flagDeflipData: |
|
|
514 | 530 | processFlags += PROCFLAG.DEFLIP_DATA |
|
|
515 | 531 | |
|
|
516 | 532 | if self.dataOut.code != None: |
|
|
517 | 533 | processFlags += PROCFLAG.DEFINE_PROCESS_CODE |
|
|
518 | 534 | |
|
|
519 | 535 | if self.dataOut.nCohInt > 1: |
|
|
520 | 536 | processFlags += PROCFLAG.COHERENT_INTEGRATION |
|
|
521 | 537 | |
|
|
522 | 538 | return processFlags |
|
|
523 | 539 | |
|
|
524 | 540 | |
|
|
525 | 541 | def __getBlockSize(self): |
|
|
526 | 542 | ''' |
|
|
527 | 543 | Este metodos determina el cantidad de bytes para un bloque de datos de tipo Voltage |
|
|
528 | 544 | ''' |
|
|
529 | 545 | |
|
|
530 | 546 | dtype0 = numpy.dtype([('real','<i1'),('imag','<i1')]) |
|
|
531 | 547 | dtype1 = numpy.dtype([('real','<i2'),('imag','<i2')]) |
|
|
532 | 548 | dtype2 = numpy.dtype([('real','<i4'),('imag','<i4')]) |
|
|
533 | 549 | dtype3 = numpy.dtype([('real','<i8'),('imag','<i8')]) |
|
|
534 | 550 | dtype4 = numpy.dtype([('real','<f4'),('imag','<f4')]) |
|
|
535 | 551 | dtype5 = numpy.dtype([('real','<f8'),('imag','<f8')]) |
|
|
536 | 552 | |
|
|
537 | 553 | dtypeList = [dtype0, dtype1, dtype2, dtype3, dtype4, dtype5] |
|
|
538 | 554 | datatypeValueList = [1,2,4,8,4,8] |
|
|
539 | 555 | for index in range(len(dtypeList)): |
|
|
540 | 556 | if self.dataOut.dtype == dtypeList[index]: |
|
|
541 | 557 | datatypeValue = datatypeValueList[index] |
|
|
542 | 558 | break |
|
|
543 | 559 | |
|
|
544 | 560 | blocksize = int(self.dataOut.nHeights * self.dataOut.nChannels * self.profilesPerBlock * datatypeValue * 2) |
|
|
545 | 561 | |
|
|
546 | 562 | return blocksize |
|
|
547 | 563 | |
|
|
548 | 564 | def setFirstHeader(self): |
|
|
549 | 565 | |
|
|
550 | 566 | """ |
|
|
551 | 567 | Obtiene una copia del First Header |
|
|
552 | 568 | |
|
|
553 | 569 | Affected: |
|
|
554 | 570 | self.systemHeaderObj |
|
|
555 | 571 | self.radarControllerHeaderObj |
|
|
556 | 572 | self.dtype |
|
|
557 | 573 | |
|
|
558 | 574 | Return: |
|
|
559 | 575 | None |
|
|
560 | 576 | """ |
|
|
561 | 577 | |
|
|
562 | 578 | self.systemHeaderObj = self.dataOut.systemHeaderObj.copy() |
|
|
563 | 579 | self.systemHeaderObj.nChannels = self.dataOut.nChannels |
|
|
564 | 580 | self.radarControllerHeaderObj = self.dataOut.radarControllerHeaderObj.copy() |
|
|
565 | 581 | |
|
|
566 | 582 | self.setBasicHeader() |
|
|
567 | 583 | |
|
|
568 | 584 | processingHeaderSize = 40 # bytes |
|
|
569 | 585 | self.processingHeaderObj.dtype = 0 # Voltage |
|
|
570 | 586 | self.processingHeaderObj.blockSize = self.__getBlockSize() |
|
|
571 | 587 | self.processingHeaderObj.profilesPerBlock = self.profilesPerBlock |
|
|
572 | 588 | self.processingHeaderObj.dataBlocksPerFile = self.blocksPerFile |
|
|
573 | 589 | self.processingHeaderObj.nWindows = 1 #podria ser 1 o self.dataOut.processingHeaderObj.nWindows |
|
|
574 | 590 | self.processingHeaderObj.processFlags = self.__getProcessFlags() |
|
|
575 | 591 | self.processingHeaderObj.nCohInt = self.dataOut.nCohInt |
|
|
576 | 592 | self.processingHeaderObj.nIncohInt = 1 # Cuando la data de origen es de tipo Voltage |
|
|
577 | 593 | self.processingHeaderObj.totalSpectra = 0 # Cuando la data de origen es de tipo Voltage |
|
|
578 | 594 | |
|
|
579 | 595 | # if self.dataOut.code != None: |
|
|
580 | 596 | # self.processingHeaderObj.code = self.dataOut.code |
|
|
581 | 597 | # self.processingHeaderObj.nCode = self.dataOut.nCode |
|
|
582 | 598 | # self.processingHeaderObj.nBaud = self.dataOut.nBaud |
|
|
583 | 599 | # codesize = int(8 + 4 * self.dataOut.nCode * self.dataOut.nBaud) |
|
|
584 | 600 | # processingHeaderSize += codesize |
|
|
585 | 601 | |
|
|
586 | 602 | if self.processingHeaderObj.nWindows != 0: |
|
|
587 | 603 | self.processingHeaderObj.firstHeight = self.dataOut.heightList[0] |
|
|
588 | 604 | self.processingHeaderObj.deltaHeight = self.dataOut.heightList[1] - self.dataOut.heightList[0] |
|
|
589 | 605 | self.processingHeaderObj.nHeights = self.dataOut.nHeights |
|
|
590 | 606 | self.processingHeaderObj.samplesWin = self.dataOut.nHeights |
|
|
591 | 607 | processingHeaderSize += 12 |
|
|
592 | 608 | |
|
|
593 | 609 | self.processingHeaderObj.size = processingHeaderSize No newline at end of file |
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