schain Commit - r495:4f47402d085c · Jicamarca Repository

Reading and doing Operation in Blocks to processing radar data from MST_ISR_EEJ Experiment

Daniel Valdez -

r495:4f47402d085c

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r495:4f47402d085c

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schainpy/test/mst_isr_eej_blocks.py created 644 +217 0

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	1	import os, sys
	2	import timeit
	3
	4	path = os.path.split(os.getcwd())[0]
	5	sys.path.append(path)
	6
	7	from controller import *
	8
	9	desc = "MST-ISR-EEJ Experiment Test"
	10	filename = "mst_isr_eej_blocks.xml"
	11
	12	controllerObj = Project()
	13
	14	controllerObj.setup(id = '191', name='test01', description=desc)
	15
	16	path='/remote/ewdrifts/RAW_EXP/EW_DRIFT_FARADAY/EW_Drift'
	17
	18	path = '/media/administrator/New Volume/DATA/MST_ISR'
	19
	20	path = '/home/administrator/Documents/mst_isr_eej'
	21
	22	readUnitConfObj = controllerObj.addReadUnit(datatype='VoltageReader',
	23	path=path,
	24	startDate='2014/01/09',
	25	endDate='2014/01/09',
	26	startTime='00:00:00',
	27	endTime='23:59:59',
	28	online=0,
	29	delay=10,
	30	walk=0,
	31	getblock=1)
	32
	33	opObj11 = readUnitConfObj.addOperation(name='printNumberOfBlock')
	34	# ################ EEJ ####################################
	35	procUnitConfObjEEJ = controllerObj.addProcUnit(datatype='VoltageProc', inputId=readUnitConfObj.getId())
	36
	37	opObj11 = procUnitConfObjEEJ.addOperation(name='ProfileSelector', optype='other')
	38	opObj11.addParameter(name='profileRangeList', value='120,183', format='intlist')
	39	opObj11.addParameter(name='byblock', value='1', format='bool')
	40
	41	opObj11 = procUnitConfObjEEJ.addOperation(name='Decoder', optype='other')
	42	opObj11.addParameter(name='code', value='1,-1', format='floatlist')
	43	opObj11.addParameter(name='nCode', value='2', format='int')
	44	opObj11.addParameter(name='nBaud', value='1', format='int')
	45	opObj11.addParameter(name='mode', value='3', format='int')
	46	opObj11.addParameter(name='times', value='32', format='int')
	47
	48	# opObj11 = procUnitConfObjEEJ.addOperation(name='CohInt', optype='other')
	49	# opObj11.addParameter(name='n', value='2', format='int')
	50
	51	procUnitConfObjEEJSpecta = controllerObj.addProcUnit(datatype='SpectraProc', inputId=procUnitConfObjEEJ.getId())
	52	procUnitConfObjEEJSpecta.addParameter(name='nFFTPoints', value='64', format='int')
	53	procUnitConfObjEEJSpecta.addParameter(name='nProfiles', value='64', format='int')
	54
	55	opObj11 = procUnitConfObjEEJSpecta.addOperation(name='IncohInt', optype='other')
	56	#opObj11.addParameter(name='timeInterval', value='10', format='float')
	57	opObj11.addParameter(name='n', value='36', format='float')
	58
	59	opObj11 = procUnitConfObjEEJSpecta.addOperation(name='SpectraPlot', optype='other')
	60	opObj11.addParameter(name='id', value='100', format='int')
	61	opObj11.addParameter(name='wintitle', value='EEJ', format='str')
	62	# opObj11.addParameter(name='zmin', value='20', format='int')
	63	# opObj11.addParameter(name='zmax', value='60', format='int')# opObj11.addParameter(name='ftp', value='1', format='int')
	64	# opObj11.addParameter(name='save', value='1', format='int')
	65	# opObj11.addParameter(name='figpath', value='/home/operaciones/Pictures/MST-ISR', format='str')
	66	# opObj11.addParameter(name='wr_period', value='15', format='int')
	67	# opObj11.addParameter(name='ftp', value='1', format='int')
	68	# opObj11.addParameter(name='server', value='jro-app.igp.gob.pe', format='str')
	69	# opObj11.addParameter(name='folder', value='/home/wmaster/graficos', format='str')
	70	# opObj11.addParameter(name='username', value='wmaster', format='str')
	71	# opObj11.addParameter(name='password', value='mst2010vhf', format='str')
	72	# opObj11.addParameter(name='ftp_wei', value='0', format='int')
	73	# opObj11.addParameter(name='exp_code', value='22', format='int')
	74	# opObj11.addParameter(name='sub_exp_code', value='0', format='int')
	75	# opObj11.addParameter(name='plot_pos', value='0', format='int')
	76
	77
	78	# opObj11 = procUnitConfObjEEJSpecta.addOperation(name='RTIPlot', optype='other')
	79	# opObj11.addParameter(name='id', value='101', format='int')
	80	# opObj11.addParameter(name='wintitle', value='EEJ', format='str')
	81	# opObj11.addParameter(name='showprofile', value='0', format='int')
	82	# opObj11.addParameter(name='xmin', value='0', format='int')
	83	# opObj11.addParameter(name='xmax', value='24', format='int')
	84	# opObj11.addParameter(name='save', value='1', format='int')
	85	# opObj11.addParameter(name='figpath', value='/home/operaciones/Pictures/MST-ISR', format='str')
	86	# opObj11.addParameter(name='wr_period', value='15', format='int')
	87	# opObj11.addParameter(name='ftp', value='1', format='int')
	88	# opObj11.addParameter(name='server', value='jro-app.igp.gob.pe', format='str')
	89	# opObj11.addParameter(name='folder', value='/home/wmaster/graficos', format='str')
	90	# opObj11.addParameter(name='username', value='wmaster', format='str')
	91	# opObj11.addParameter(name='password', value='mst2010vhf', format='str')
	92	# opObj11.addParameter(name='ftp_wei', value='0', format='int')
	93	# opObj11.addParameter(name='exp_code', value='22', format='int')
	94	# opObj11.addParameter(name='sub_exp_code', value='0', format='int')
	95	# opObj11.addParameter(name='plot_pos', value='0', format='int')
	96
	97	################ MST ####################################
	98	procUnitConfObjMST = controllerObj.addProcUnit(datatype='VoltageProc', inputId=readUnitConfObj.getId())
	99
	100	opObj11 = procUnitConfObjMST.addOperation(name='ProfileSelector', optype='other')
	101	profileIndex = '0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19,100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119'
	102	#profileIndex = '0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19'
	103	opObj11.addParameter(name='profileList', value=profileIndex, format='intlist')
	104	opObj11.addParameter(name='byblock', value='1', format='bool')
	105
	106	opObj11 = procUnitConfObjMST.addOperation(name='Decoder', optype='other')
	107	opObj11.addParameter(name='mode',value='3',format='int')
	108	opObj11.addParameter(name='times',value='10',format='int')
	109
	110	opObj11 = procUnitConfObjMST.addOperation(name='CohInt', optype='other')
	111	opObj11.addParameter(name='n', value='20', format='int')
	112	opObj11.addParameter(name='byblock', value='1', format='bool')
	113
	114	procUnitConfObjMSTSpectra = controllerObj.addProcUnit(datatype='SpectraProc', inputId=procUnitConfObjMST.getId())
	115	procUnitConfObjMSTSpectra.addParameter(name='nFFTPoints', value='64', format='int')
	116	procUnitConfObjMSTSpectra.addParameter(name='nProfiles', value='64', format='int')
	117
	118	opObj11 = procUnitConfObjMSTSpectra.addOperation(name='IncohInt', optype='other')
	119	opObj11.addParameter(name='n', value='2', format='float')
	120
	121	opObj11 = procUnitConfObjMSTSpectra.addOperation(name='SpectraPlot', optype='other')
	122	opObj11.addParameter(name='id', value='200', format='int')
	123	opObj11.addParameter(name='wintitle', value='MST', format='str')
	124	# opObj11.addParameter(name='zmin', value='35', format='int')
	125	# opObj11.addParameter(name='zmax', value='60', format='int')
	126	# opObj11.addParameter(name='save', value='1', format='int')
	127	# opObj11.addParameter(name='figpath', value='/home/operaciones/Pictures/MST-ISR', format='str')
	128	# opObj11.addParameter(name='wr_period', value='5', format='int')
	129	# opObj11.addParameter(name='ftp', value='1', format='int')
	130	# opObj11.addParameter(name='server', value='jro-app.igp.gob.pe', format='str')
	131	# opObj11.addParameter(name='folder', value='/home/wmaster/graficos', format='str')
	132	# opObj11.addParameter(name='username', value='wmaster', format='str')
	133	# opObj11.addParameter(name='password', value='mst2010vhf', format='str')
	134	# opObj11.addParameter(name='ftp_wei', value='0', format='int')
	135	# opObj11.addParameter(name='exp_code', value='19', format='int')
	136	# opObj11.addParameter(name='sub_exp_code', value='0', format='int')
	137	# opObj11.addParameter(name='plot_pos', value='0', format='int')
	138	#
	139	# opObj11 = procUnitConfObjMSTSpectra.addOperation(name='RTIPlot', optype='other')
	140	# opObj11.addParameter(name='id', value='201', format='int')
	141	# opObj11.addParameter(name='wintitle', value='MST', format='str')
	142	# opObj11.addParameter(name='showprofile', value='0', format='int')
	143	# opObj11.addParameter(name='xmin', value='0', format='int')
	144	# opObj11.addParameter(name='xmax', value='24', format='int')
	145	# opObj11.addParameter(name='zmin', value='35', format='int')
	146	# opObj11.addParameter(name='zmax', value='60', format='int')
	147	# opObj11.addParameter(name='save', value='1', format='int')
	148	# opObj11.addParameter(name='figpath', value='/home/operaciones/Pictures/MST-ISR', format='str')
	149	# opObj11.addParameter(name='wr_period', value='5', format='int')
	150	# opObj11.addParameter(name='ftp', value='1', format='int')
	151	# opObj11.addParameter(name='server', value='jro-app.igp.gob.pe', format='str')
	152	# opObj11.addParameter(name='folder', value='/home/wmaster/graficos', format='str')
	153	# opObj11.addParameter(name='username', value='wmaster', format='str')
	154	# opObj11.addParameter(name='password', value='mst2010vhf', format='str')
	155	# opObj11.addParameter(name='ftp_wei', value='0', format='int')
	156	# opObj11.addParameter(name='exp_code', value='19', format='int')
	157	# opObj11.addParameter(name='sub_exp_code', value='0', format='int')
	158	# opObj11.addParameter(name='plot_pos', value='0', format='int')
	159
	160	# ################ ISR ####################################
	161	procUnitConfObjISR = controllerObj.addProcUnit(datatype='VoltageProc', inputId=readUnitConfObj.getId())
	162
	163	opObj11 = procUnitConfObjISR.addOperation(name='ProfileSelector', optype='other')
	164	# profileIndex = '20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99'
	165	# opObj11.addParameter(name='profileList', value=profileIndex, format='intlist')
	166	opObj11.addParameter(name='profileRangeList', value='20,99', format='intlist')
	167	opObj11.addParameter(name='byblock', value='1', format='bool')
	168
	169	# opObj11 = procUnitConfObjISR.addOperation(name='ProfileConcat', optype='other')
	170	# opObj11.addParameter(name='m', value='5', format='int')
	171
	172	opObj11 = procUnitConfObjISR.addOperation(name='Reshaper', optype='other') #Esta Operacion opera sobre bloques y reemplaza el ProfileConcat que opera sobre perfiles
	173	opObj11.addParameter(name='shape', value='4,16,6750', format='intlist')
	174
	175	opObj11 = procUnitConfObjISR.addOperation(name='filterByHeights')
	176	opObj11.addParameter(name='window', value='20', format='int')
	177	opObj11.addParameter(name='axis', value='2', format='int')
	178
	179	barker3x1 = '1,1,-1,-1,-1,1'
	180	#barker3x5 = '1,1,1,1,1, 1,1,1,1,1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,1,1,1,1,1'
	181
	182	opObj11 = procUnitConfObjISR.addOperation(name='Decoder', optype='other')
	183	opObj11.addParameter(name='code', value=barker3x1, format='floatlist')
	184	opObj11.addParameter(name='nCode', value='2', format='int')
	185	#opObj11.addParameter(name='nBaud', value='15', format='int')
	186	opObj11.addParameter(name='nBaud', value='3', format='int')
	187	opObj11.addParameter(name='mode', value='3', format='int')
	188	opObj11.addParameter(name='times', value='8', format='int')
	189	opObj11.addParameter(name='osamp', value='5', format='int')
	190
	191
	192	procUnitConfObjISRSpectra = controllerObj.addProcUnit(datatype='SpectraProc', inputId=procUnitConfObjISR.getId())
	193	procUnitConfObjISRSpectra.addParameter(name='nFFTPoints', value='16', format='int')
	194	procUnitConfObjISRSpectra.addParameter(name='nProfiles', value='16', format='int')
	195
	196	opObj11 = procUnitConfObjISRSpectra.addOperation(name='IncohInt', optype='other')
	197	opObj11.addParameter(name='n', value='36', format='float')
	198
	199	opObj11 = procUnitConfObjISRSpectra.addOperation(name='SpectraPlot', optype='other')
	200	opObj11.addParameter(name='id', value='300', format='int')
	201	opObj11.addParameter(name='wintitle', value='ISR', format='str')
	202	# opObj11.addParameter(name='save', value='1', format='bool')
	203	# opObj11.addParameter(name='figpath', value='/home/administrator/Pictures/mst_isr_eej', format='str')
	204
	205
	206	print "Escribiendo el archivo XML"
	207	controllerObj.writeXml(filename)
	208	print "Leyendo el archivo XML"
	209	controllerObj.readXml(filename)
	210
	211	controllerObj.createObjects()
	212	controllerObj.connectObjects()
	213
	214	#timeit.timeit('controllerObj.run()', number=2)
	215
	216	controllerObj.run()
	217	#print fib(5) No newline at end of file

schainpy/model/io/jroIO_base.py +5 -2

             '''
             '''
             import os
             import sys
             import glob
             import time
             import numpy
             import fnmatch
             import time, datetime
             #import h5py
             import traceback
             #try:
             #    import pyfits
             #except:
             #    print "pyfits module has not been imported, it should be installed to save files in fits format"
             #from jrodata import *
             #from jroheaderIO import *
             #from jroprocessing import *
             #import re
             #from xml.etree.ElementTree import Element, SubElement, ElementTree
             LOCALTIME = True #-18000
             from model.data.jroheaderIO import PROCFLAG, BasicHeader, SystemHeader, RadarControllerHeader, ProcessingHeader
             def isNumber(str):
                 """
                 Chequea si el conjunto de caracteres que componen un string puede ser convertidos a un numero.
                 Excepciones:
                     Si un determinado string no puede ser convertido a numero
                 Input:
                     str, string al cual se le analiza para determinar si convertible a un numero o no
                 Return:
                     True    :    si el string es uno numerico
                     False   :    no es un string numerico
                 """
                 try:
                     float( str )
                     return True
                 except:
                     return False
             def isThisFileinRange(filename, startUTSeconds, endUTSeconds):
                 """
                 Esta funcion determina si un archivo de datos se encuentra o no dentro del rango de fecha especificado.
                 Inputs:
                     filename            :    nombre completo del archivo de datos en formato Jicamarca (.r)
                     startUTSeconds      :    fecha inicial del rango seleccionado. La fecha esta dada en
                                              segundos contados desde 01/01/1970.
                     endUTSeconds        :    fecha final del rango seleccionado. La fecha esta dada en
                                              segundos contados desde 01/01/1970.
                 Return:
                     Boolean    :    Retorna True si el archivo de datos contiene datos en el rango de
                                     fecha especificado, de lo contrario retorna False.
                 Excepciones:
                     Si el archivo no existe o no puede ser abierto
                     Si la cabecera no puede ser leida.
                 """
                 basicHeaderObj = BasicHeader(LOCALTIME)
                 try:
                     fp = open(filename,'rb')
                 except IOError:
                     traceback.print_exc()
                     raise IOError, "The file %s can't be opened" %(filename)
                 sts = basicHeaderObj.read(fp)
                 fp.close()
                 if not(sts):
                     print "Skipping the file %s because it has not a valid header" %(filename)
                     return 0
                 if not ((startUTSeconds <= basicHeaderObj.utc) and (endUTSeconds > basicHeaderObj.utc)):
                     return 0
                 return 1
             def isFileinThisTime(filename, startTime, endTime):
                 """
                 Retorna 1 si el archivo de datos se encuentra dentro del rango de horas especificado.
                 Inputs:
                     filename            :    nombre completo del archivo de datos en formato Jicamarca (.r)
                     startTime          :    tiempo inicial del rango seleccionado en formato datetime.time
                     endTime            :    tiempo final del rango seleccionado en formato datetime.time
                 Return:
                     Boolean    :    Retorna True si el archivo de datos contiene datos en el rango de
                                     fecha especificado, de lo contrario retorna False.
                 Excepciones:
                     Si el archivo no existe o no puede ser abierto
                     Si la cabecera no puede ser leida.
                 """
                 try:
                     fp = open(filename,'rb')
                 except IOError:
                     traceback.print_exc()
                     raise IOError, "The file %s can't be opened" %(filename)
                 basicHeaderObj = BasicHeader(LOCALTIME)
                 sts = basicHeaderObj.read(fp)
                 fp.close()
                 thisDatetime = basicHeaderObj.datatime
                 thisTime = thisDatetime.time()
                 if not(sts):
                     print "Skipping the file %s because it has not a valid header" %(filename)
                     return None
                 if not ((startTime <= thisTime) and (endTime > thisTime)):
                     return None
                 return thisDatetime
             def getFileFromSet(path, ext, set):
                 validFilelist = []
                 fileList = os.listdir(path)
                 # 0 1234 567 89A BCDE
                 # H YYYY DDD SSS .ext
                 for thisFile in fileList:
                     try:
                         year = int(thisFile[1:5])
                         doy  = int(thisFile[5:8])
                     except:
                         continue
                     if (os.path.splitext(thisFile)[-1].lower() != ext.lower()):
                         continue
                     validFilelist.append(thisFile)
                 myfile = fnmatch.filter(validFilelist,'*%4.4d%3.3d%3.3d*'%(year,doy,set))
                 if len(myfile)!= 0:
                     return myfile[0]
                 else:
                     filename = '*%4.4d%3.3d%3.3d%s'%(year,doy,set,ext.lower())
                     print 'the filename %s does not exist'%filename
                     print '...going to the last file: '
                 if validFilelist:
                     validFilelist = sorted( validFilelist, key=str.lower )
                     return validFilelist[-1]
                 return None
             def getlastFileFromPath(path, ext):
                 """
                 Depura el fileList dejando solo los que cumplan el formato de "PYYYYDDDSSS.ext"
                 al final de la depuracion devuelve el ultimo file de la lista que quedo.
                 Input:
                     fileList    :    lista conteniendo todos los files (sin path) que componen una determinada carpeta
                     ext         :    extension de los files contenidos en una carpeta
                 Return:
                     El ultimo file de una determinada carpeta, no se considera el path.
                 """
                 validFilelist = []
                 fileList = os.listdir(path)
                 # 0 1234 567 89A BCDE
                 # H YYYY DDD SSS .ext
                 for thisFile in fileList:
                     year = thisFile[1:5]
                     if not isNumber(year):
                         continue
                     doy = thisFile[5:8]
                     if not isNumber(doy):
                         continue
                     year = int(year)
                     doy = int(doy)
                     if (os.path.splitext(thisFile)[-1].lower() != ext.lower()):
                         continue
                     validFilelist.append(thisFile)
                 if validFilelist:
                     validFilelist = sorted( validFilelist, key=str.lower )
                     return validFilelist[-1]
                 return None
             def checkForRealPath(path, foldercounter, year, doy, set, ext):
                 """
                 Por ser Linux Case Sensitive entonces checkForRealPath encuentra el nombre correcto de un path,
                 Prueba por varias combinaciones de nombres entre mayusculas y minusculas para determinar
                 el path exacto de un determinado file.
                 Example    :
                     nombre correcto del file es  .../.../D2009307/P2009307367.ext
                     Entonces la funcion prueba con las siguientes combinaciones
                         .../.../y2009307367.ext
                         .../.../Y2009307367.ext
                         .../.../x2009307/y2009307367.ext
                         .../.../x2009307/Y2009307367.ext
                         .../.../X2009307/y2009307367.ext
                         .../.../X2009307/Y2009307367.ext
                     siendo para este caso, la ultima combinacion de letras, identica al file buscado
                 Return:
                     Si encuentra la cobinacion adecuada devuelve el path completo y el nombre del file
                     caso contrario devuelve None como path y el la ultima combinacion de nombre en mayusculas
                     para el filename
                 """
                 fullfilename = None
                 find_flag = False
                 filename = None
                 prefixDirList = [None,'d','D']
                 if ext.lower() == ".r": #voltage
                     prefixFileList = ['d','D']
                 elif ext.lower() == ".pdata": #spectra
                     prefixFileList = ['p','P']
                 else:
                     return None, filename
                 #barrido por las combinaciones posibles
                 for prefixDir in prefixDirList:
                     thispath = path
                     if prefixDir != None:
                         #formo el nombre del directorio xYYYYDDD (x=d o x=D)
                         if foldercounter == 0:
                             thispath = os.path.join(path, "%s%04d%03d" % ( prefixDir, year, doy ))
                         else:
                             thispath = os.path.join(path, "%s%04d%03d_%02d" % ( prefixDir, year, doy , foldercounter))
                     for prefixFile in prefixFileList: #barrido por las dos combinaciones posibles de "D"
                         filename = "%s%04d%03d%03d%s" % ( prefixFile, year, doy, set, ext ) #formo el nombre del file xYYYYDDDSSS.ext
                         fullfilename = os.path.join( thispath, filename ) #formo el path completo
                         if os.path.exists( fullfilename ): #verifico que exista
                             find_flag = True
                             break
                     if find_flag:
                         break
                 if not(find_flag):
                     return None, filename
                 return fullfilename, filename
             def isDoyFolder(folder):
                 try:
                     year = int(folder[1:5])
                 except:
                     return 0
                 try:
                     doy = int(folder[5:8])
                 except:
                     return 0
                 return 1
             class JRODataIO:
                 c = 3E8
                 isConfig = False
                 basicHeaderObj = None
                 systemHeaderObj = None
                 radarControllerHeaderObj = None
                 processingHeaderObj = None
                 online = 0
                 dtype = None
                 pathList = []
                 filenameList = []
                 filename = None
                 ext = None
                 flagIsNewFile = 1
                 flagTimeBlock = 0
                 flagIsNewBlock = 0
                 fp = None
                 firstHeaderSize = 0
                 basicHeaderSize = 24
                 versionFile = 1103
                 fileSize = None
             #     ippSeconds = None
                 fileSizeByHeader = None
                 fileIndex = None
                 profileIndex = None
                 blockIndex = None
                 nTotalBlocks = None
                 maxTimeStep = 30
                 lastUTTime = None
                 datablock = None
                 dataOut = None
                 blocksize = None
+                getblock = False
                 def __init__(self):
                     raise ValueError, "Not implemented"
                 def run(self):
                     raise ValueError, "Not implemented"
             class JRODataReader(JRODataIO):
                 nReadBlocks = 0
                 delay  = 10   #number of seconds waiting a new file
                 nTries  = 3  #quantity tries
                 nFiles = 3   #number of files for searching
                 path = None
                 foldercounter = 0
                 flagNoMoreFiles = 0
                 datetimeList = []
                 __isFirstTimeOnline = 1
                 __printInfo = True
                 profileIndex = None
                 def __init__(self):
                     """
                     """
                     raise ValueError, "This method has not been implemented"
                 def createObjByDefault(self):
                     """
                     """
                     raise ValueError, "This method has not been implemented"
                 def getBlockDimension(self):
                     raise ValueError, "No implemented"
                 def __searchFilesOffLine(self,
                                         path,
                                         startDate,
                                         endDate,
                                         startTime=datetime.time(0,0,0),
                                         endTime=datetime.time(23,59,59),
                                         set=None,
                                         expLabel='',
                                         ext='.r',
                                         walk=True):
                     pathList = []
                     if not walk:
                         #pathList.append(path)
                         multi_path = path.split(',')
                         for single_path in multi_path:
                             pathList.append(single_path)
                     else:
                         #dirList = []
                         multi_path = path.split(',')
                         for single_path in multi_path:
                             dirList = []
                             for thisPath in os.listdir(single_path):
                                 if not os.path.isdir(os.path.join(single_path,thisPath)):
                                     continue
                                 if not isDoyFolder(thisPath):
                                     continue
                                 dirList.append(thisPath)
                             if not(dirList):
                                 return None, None
                             thisDate = startDate
                             while(thisDate <= endDate):
                                 year = thisDate.timetuple().tm_year
                                 doy = thisDate.timetuple().tm_yday
                                 matchlist = fnmatch.filter(dirList, '?' + '%4.4d%3.3d' % (year,doy) + '*')
                                 if len(matchlist) == 0:
                                     thisDate += datetime.timedelta(1)
                                     continue
                                 for match in matchlist:
                                     pathList.append(os.path.join(single_path,match,expLabel))
                                 thisDate += datetime.timedelta(1)
                     if pathList == []:
                         print "Any folder was found for the date range: %s-%s" %(startDate, endDate)
                         return None, None
                     print "%d folder(s) was(were) found for the date range: %s - %s" %(len(pathList), startDate, endDate)
                     filenameList = []
                     datetimeList = []
                     pathDict = {}
                     filenameList_to_sort = []
                     for i in range(len(pathList)):
                         thisPath = pathList[i]
                         fileList = glob.glob1(thisPath, "*%s" %ext)
                         fileList.sort()
                         pathDict.setdefault(fileList[0])
                         pathDict[fileList[0]] = i
                         filenameList_to_sort.append(fileList[0])
                     filenameList_to_sort.sort()
                     for file in filenameList_to_sort:
                         thisPath = pathList[pathDict[file]]
                         fileList = glob.glob1(thisPath, "*%s" %ext)
                         fileList.sort()
                         for file in fileList:
                             filename = os.path.join(thisPath,file)
                             thisDatetime = isFileinThisTime(filename, startTime, endTime)
                             if not(thisDatetime):
                                 continue
                             filenameList.append(filename)
                             datetimeList.append(thisDatetime)
                     if not(filenameList):
                         print "Any file was found for the time range %s - %s" %(startTime, endTime)
                         return None, None
                     print "%d file(s) was(were) found for the time range: %s - %s" %(len(filenameList), startTime, endTime)
                     print
                     for i in range(len(filenameList)):
                         print "%s -> [%s]" %(filenameList[i], datetimeList[i].ctime())
                     self.filenameList = filenameList
                     self.datetimeList = datetimeList
                     return pathList, filenameList
                 def __searchFilesOnLine(self, path, expLabel = "", ext = None, walk=True, set=None):
                     """
                     Busca el ultimo archivo de la ultima carpeta (determinada o no por startDateTime) y
                     devuelve el archivo encontrado ademas de otros datos.
                     Input:
                         path           :    carpeta donde estan contenidos los files que contiene data
                         expLabel        :     Nombre del subexperimento (subfolder)
                         ext              :    extension de los files
                         walk        :    Si es habilitado no realiza busquedas dentro de los ubdirectorios (doypath)
                     Return:
                         directory   :    eL directorio donde esta el file encontrado
                         filename    :    el ultimo file de una determinada carpeta
                         year        :    el anho
                         doy         :    el numero de dia del anho
                         set         :    el set del archivo
                     """
                     dirList = []
                     if not walk:
                         fullpath = path
                         foldercounter = 0
                     else:
                         #Filtra solo los directorios
                         for thisPath in os.listdir(path):
                             if not os.path.isdir(os.path.join(path,thisPath)):
                                 continue
                             if not isDoyFolder(thisPath):
                                 continue
                             dirList.append(thisPath)
                         if not(dirList):
                             return None, None, None, None, None, None
                         dirList = sorted( dirList, key=str.lower )
                         doypath = dirList[-1]
                         foldercounter = int(doypath.split('_')[1]) if len(doypath.split('_'))>1 else 0
                         fullpath = os.path.join(path, doypath, expLabel)
                     print "%s folder was found: " %(fullpath )
                     if set == None:
                         filename = getlastFileFromPath(fullpath, ext)
                     else:
                         filename = getFileFromSet(fullpath, ext, set)
                     if not(filename):
                         return None, None, None, None, None, None
                     print "%s file was found" %(filename)
                     if not(self.__verifyFile(os.path.join(fullpath, filename))):
                         return None, None, None, None, None, None
                     year = int( filename[1:5] )
                     doy  = int( filename[5:8] )
                     set  = int( filename[8:11] )
                     return fullpath, foldercounter, filename, year, doy, set
                 def __setNextFileOffline(self):
                     idFile = self.fileIndex
                     while (True):
                         idFile += 1
                         if not(idFile < len(self.filenameList)):
                             self.flagNoMoreFiles = 1
                             print "No more Files"
                             return 0
                         filename = self.filenameList[idFile]
                         if not(self.__verifyFile(filename)):
                             continue
                         fileSize = os.path.getsize(filename)
                         fp = open(filename,'rb')
                         break
                     self.flagIsNewFile = 1
                     self.fileIndex = idFile
                     self.filename = filename
                     self.fileSize = fileSize
                     self.fp = fp
                     print "Setting the file: %s"%self.filename
                     return 1
                 def __setNextFileOnline(self):
                     """
                     Busca el siguiente file que tenga suficiente data para ser leida, dentro de un folder especifico, si
                     no encuentra un file valido espera un tiempo determinado y luego busca en los posibles n files
                     siguientes.
                     Affected:
                         self.flagIsNewFile
                         self.filename
                         self.fileSize
                         self.fp
                         self.set
                         self.flagNoMoreFiles
                     Return:
 : si luego de una busqueda del siguiente file valido este no pudo ser encontrado
 : si el file fue abierto con exito y esta listo a ser leido
                     Excepciones:
                         Si un determinado file no puede ser abierto
                     """
                     nFiles = 0
                     fileOk_flag = False
                     firstTime_flag = True
                     self.set += 1
                     if self.set > 999:
                         self.set = 0
                         self.foldercounter += 1
                     #busca el 1er file disponible
                     fullfilename, filename = checkForRealPath( self.path, self.foldercounter, self.year, self.doy, self.set, self.ext )
                     if fullfilename:
                         if self.__verifyFile(fullfilename, False):
                             fileOk_flag = True
                     #si no encuentra un file entonces espera y vuelve a buscar
                     if not(fileOk_flag):
                         for nFiles in range(self.nFiles+1): #busco en los siguientes self.nFiles+1 files posibles
                             if firstTime_flag: #si es la 1era vez entonces hace el for self.nTries veces
                                 tries = self.nTries
                             else:
                                 tries = 1 #si no es la 1era vez entonces solo lo hace una vez
                             for nTries in range( tries ):
                                 if firstTime_flag:
                                     print "\tWaiting %0.2f sec for the file \"%s\" , try %03d ..." % ( self.delay, filename, nTries+1 )
                                     time.sleep( self.delay )
                                 else:
                                     print "\tSearching next \"%s%04d%03d%03d%s\" file ..." % (self.optchar, self.year, self.doy, self.set, self.ext)
                                 fullfilename, filename = checkForRealPath( self.path, self.foldercounter, self.year, self.doy, self.set, self.ext )
                                 if fullfilename:
                                     if self.__verifyFile(fullfilename):
                                         fileOk_flag = True
                                         break
                             if fileOk_flag:
                                 break
                             firstTime_flag = False
                             print "\tSkipping the file \"%s\" due to this file doesn't exist" % filename
                             self.set += 1
                             if nFiles == (self.nFiles-1): #si no encuentro el file buscado cambio de carpeta y busco en la siguiente carpeta
                                 self.set = 0
                                 self.doy += 1
                                 self.foldercounter = 0
                     if fileOk_flag:
                         self.fileSize = os.path.getsize( fullfilename )
                         self.filename = fullfilename
                         self.flagIsNewFile = 1
                         if self.fp != None: self.fp.close()
                         self.fp = open(fullfilename, 'rb')
                         self.flagNoMoreFiles = 0
                         print 'Setting the file: %s' % fullfilename
                     else:
                         self.fileSize = 0
                         self.filename = None
                         self.flagIsNewFile = 0
                         self.fp = None
                         self.flagNoMoreFiles = 1
                         print 'No more Files'
                     return fileOk_flag
                 def setNextFile(self):
                     if self.fp != None:
                         self.fp.close()
                     if self.online:
                         newFile = self.__setNextFileOnline()
                     else:
                         newFile = self.__setNextFileOffline()
                     if not(newFile):
                         return 0
                     self.__readFirstHeader()
                     self.nReadBlocks = 0
                     return 1
                 def __waitNewBlock(self):
                     """
                     Return 1 si se encontro un nuevo bloque de datos, 0 de otra forma.
                     Si el modo de lectura es OffLine siempre retorn 0
                     """
                     if not self.online:
                         return 0
                     if (self.nReadBlocks >= self.processingHeaderObj.dataBlocksPerFile):
                         return 0
                     currentPointer = self.fp.tell()
                     neededSize = self.processingHeaderObj.blockSize + self.basicHeaderSize
                     for nTries in range( self.nTries ):
                         self.fp.close()
                         self.fp = open( self.filename, 'rb' )
                         self.fp.seek( currentPointer )
                         self.fileSize = os.path.getsize( self.filename )
                         currentSize = self.fileSize - currentPointer
                         if ( currentSize >= neededSize ):
                             self.basicHeaderObj.read(self.fp)
                             return 1
                         if self.fileSize == self.fileSizeByHeader:
             #                self.flagEoF = True
                             return 0
                         print "\tWaiting %0.2f seconds for the next block, try %03d ..." % (self.delay, nTries+1)
                         time.sleep( self.delay )
                     return 0
                 def waitDataBlock(self,pointer_location):
                     currentPointer = pointer_location
                     neededSize = self.processingHeaderObj.blockSize #+ self.basicHeaderSize
                     for nTries in range( self.nTries ):
                         self.fp.close()
                         self.fp = open( self.filename, 'rb' )
                         self.fp.seek( currentPointer )
                         self.fileSize = os.path.getsize( self.filename )
                         currentSize = self.fileSize - currentPointer
                         if ( currentSize >= neededSize ):
                             return 1
                         print "\tWaiting %0.2f seconds for the next block, try %03d ..." % (self.delay, nTries+1)
                         time.sleep( self.delay )
                     return 0
                 def __jumpToLastBlock(self):
                     if not(self.__isFirstTimeOnline):
                         return
                     csize = self.fileSize - self.fp.tell()
                     blocksize = self.processingHeaderObj.blockSize
                     #salta el primer bloque de datos
                     if csize > self.processingHeaderObj.blockSize:
                         self.fp.seek(self.fp.tell() + blocksize)
                     else:
                         return
                     csize = self.fileSize - self.fp.tell()
                     neededsize = self.processingHeaderObj.blockSize + self.basicHeaderSize
                     while True:
                         if self.fp.tell()<self.fileSize:
                             self.fp.seek(self.fp.tell() + neededsize)
                         else:
                             self.fp.seek(self.fp.tell() - neededsize)
                             break
             #        csize = self.fileSize - self.fp.tell()
             #        neededsize = self.processingHeaderObj.blockSize + self.basicHeaderSize
             #        factor = int(csize/neededsize)
             #        if factor > 0:
             #            self.fp.seek(self.fp.tell() + factor*neededsize)
                     self.flagIsNewFile = 0
                     self.__isFirstTimeOnline = 0
                 def __setNewBlock(self):
                     if self.fp == None:
                         return 0
                     if self.online:
                         self.__jumpToLastBlock()
                     if self.flagIsNewFile:
                         return 1
                     self.lastUTTime = self.basicHeaderObj.utc
                     currentSize = self.fileSize - self.fp.tell()
                     neededSize = self.processingHeaderObj.blockSize + self.basicHeaderSize
                     if (currentSize >= neededSize):
                         self.basicHeaderObj.read(self.fp)
                         return 1
                     if self.__waitNewBlock():
                         return 1
                     if not(self.setNextFile()):
                         return 0
                     deltaTime = self.basicHeaderObj.utc - self.lastUTTime #
                     self.flagTimeBlock = 0
                     if deltaTime > self.maxTimeStep:
                         self.flagTimeBlock = 1
                     return 1
                 def readNextBlock(self):
                     if not(self.__setNewBlock()):
                         return 0
                     if not(self.readBlock()):
                         return 0
                     return 1
                 def __readFirstHeader(self):
                     self.basicHeaderObj.read(self.fp)
                     self.systemHeaderObj.read(self.fp)
                     self.radarControllerHeaderObj.read(self.fp)
                     self.processingHeaderObj.read(self.fp)
                     self.firstHeaderSize = self.basicHeaderObj.size
                     datatype = int(numpy.log2((self.processingHeaderObj.processFlags & PROCFLAG.DATATYPE_MASK))-numpy.log2(PROCFLAG.DATATYPE_CHAR))
                     if datatype == 0:
                         datatype_str = numpy.dtype([('real','<i1'),('imag','<i1')])
                     elif datatype == 1:
                         datatype_str = numpy.dtype([('real','<i2'),('imag','<i2')])
                     elif datatype == 2:
                         datatype_str = numpy.dtype([('real','<i4'),('imag','<i4')])
                     elif datatype == 3:
                         datatype_str = numpy.dtype([('real','<i8'),('imag','<i8')])
                     elif datatype == 4:
                         datatype_str = numpy.dtype([('real','<f4'),('imag','<f4')])
                     elif datatype == 5:
                         datatype_str = numpy.dtype([('real','<f8'),('imag','<f8')])
                     else:
                         raise ValueError, 'Data type was not defined'
                     self.dtype = datatype_str
                     #self.ippSeconds = 2 * 1000 * self.radarControllerHeaderObj.ipp / self.c
                     self.fileSizeByHeader = self.processingHeaderObj.dataBlocksPerFile * self.processingHeaderObj.blockSize + self.firstHeaderSize + self.basicHeaderSize*(self.processingHeaderObj.dataBlocksPerFile - 1)
             #        self.dataOut.channelList = numpy.arange(self.systemHeaderObj.numChannels)
             #        self.dataOut.channelIndexList = numpy.arange(self.systemHeaderObj.numChannels)
                     self.getBlockDimension()
                 def __verifyFile(self, filename, msgFlag=True):
                     msg = None
                     try:
                         fp = open(filename, 'rb')
                         currentPosition = fp.tell()
                     except IOError:
                         traceback.print_exc()
                         if msgFlag:
                             print "The file %s can't be opened" % (filename)
                         return False
                     neededSize = self.processingHeaderObj.blockSize + self.firstHeaderSize
                     if neededSize == 0:
                         basicHeaderObj = BasicHeader(LOCALTIME)
                         systemHeaderObj = SystemHeader()
                         radarControllerHeaderObj = RadarControllerHeader()
                         processingHeaderObj = ProcessingHeader()
                         try:
                             if not( basicHeaderObj.read(fp) ): raise IOError
                             if not( systemHeaderObj.read(fp) ): raise IOError
                             if not( radarControllerHeaderObj.read(fp) ): raise IOError
                             if not( processingHeaderObj.read(fp) ): raise IOError
             #                 data_type = int(numpy.log2((processingHeaderObj.processFlags & PROCFLAG.DATATYPE_MASK))-numpy.log2(PROCFLAG.DATATYPE_CHAR))
                             neededSize = processingHeaderObj.blockSize + basicHeaderObj.size
                         except IOError:
                             traceback.print_exc()
                             if msgFlag:
                                 print "\tThe file %s is empty or it hasn't enough data" % filename
                             fp.close()
                             return False
                     else:
                         msg = "\tSkipping the file %s due to it hasn't enough data" %filename
                     fp.close()
                     fileSize = os.path.getsize(filename)
                     currentSize = fileSize - currentPosition
                     if currentSize < neededSize:
                         if msgFlag and (msg != None):
                             print msg #print"\tSkipping the file %s due to it hasn't enough data" %filename
                         return False
                     return True
                 def setup(self,
                             path=None,
                             startDate=None,
                             endDate=None,
                             startTime=datetime.time(0,0,0),
                             endTime=datetime.time(23,59,59),
                             set=None,
                             expLabel = "",
                             ext = None,
                             online = False,
                             delay = 60,
-                            walk = True):
+                            walk = True,
+                            getblock = False):
                     if path == None:
                         raise ValueError, "The path is not valid"
                     if ext == None:
                         ext = self.ext
                     if online:
                         print "Searching files in online mode..."
                         for nTries in range( self.nTries ):
                             fullpath, foldercounter, file, year, doy, set = self.__searchFilesOnLine(path=path, expLabel=expLabel, ext=ext, walk=walk, set=set)
                             if fullpath:
                                 break
                             print '\tWaiting %0.2f sec for an valid file in %s: try %02d ...' % (self.delay, path, nTries+1)
                             time.sleep( self.delay )
                         if not(fullpath):
                             print "There 'isn't valied files in %s" % path
                             return None
                         self.year = year
                         self.doy  = doy
                         self.set  = set - 1
                         self.path = path
                         self.foldercounter = foldercounter
                         last_set = None
                     else:
                         print "Searching files in offline mode ..."
                         pathList, filenameList = self.__searchFilesOffLine(path, startDate=startDate, endDate=endDate,
                                                                            startTime=startTime, endTime=endTime,
                                                                            set=set, expLabel=expLabel, ext=ext,
                                                                            walk=walk)
                         if not(pathList):
                             print "No *%s files into the folder %s \nfor the range: %s - %s"%(ext, path,
                                                                     datetime.datetime.combine(startDate,startTime).ctime(),
                                                                     datetime.datetime.combine(endDate,endTime).ctime())
                             sys.exit(-1)
                         self.fileIndex = -1
                         self.pathList = pathList
                         self.filenameList = filenameList
                         file_name = os.path.basename(filenameList[-1])
                         basename, ext = os.path.splitext(file_name)
                         last_set = int(basename[-3:])
                     self.online = online
                     self.delay = delay
                     ext = ext.lower()
                     self.ext = ext
+                    self.getblock = getblock
                     if not(self.setNextFile()):
                         if (startDate!=None) and (endDate!=None):
                             print "No files in range: %s - %s" %(datetime.datetime.combine(startDate,startTime).ctime(), datetime.datetime.combine(endDate,endTime).ctime())
                         elif startDate != None:
                             print "No files in range: %s" %(datetime.datetime.combine(startDate,startTime).ctime())
                         else:
                             print "No files"
                         sys.exit(-1)
             #        self.updateDataHeader()
                     if last_set != None:
                         self.dataOut.last_block = last_set * self.processingHeaderObj.dataBlocksPerFile + self.basicHeaderObj.dataBlock
                     return
                 def getBasicHeader(self):
                     self.dataOut.utctime = self.basicHeaderObj.utc + self.basicHeaderObj.miliSecond/1000. + self.profileIndex * self.radarControllerHeaderObj.ippSeconds
                     self.dataOut.flagTimeBlock = self.flagTimeBlock
                     self.dataOut.timeZone = self.basicHeaderObj.timeZone
                     self.dataOut.dstFlag = self.basicHeaderObj.dstFlag
                     self.dataOut.errorCount = self.basicHeaderObj.errorCount
                     self.dataOut.useLocalTime = self.basicHeaderObj.useLocalTime
                 def getFirstHeader(self):
                     raise ValueError, "This method has not been implemented"
                 def getData(self):
                     raise ValueError, "This method has not been implemented"
                 def hasNotDataInBuffer(self):
                     raise ValueError, "This method has not been implemented"
                 def readBlock(self):
                     raise ValueError, "This method has not been implemented"
                 def isEndProcess(self):
                     return self.flagNoMoreFiles
                 def printReadBlocks(self):
                     print "Number of read blocks per file %04d" %self.nReadBlocks
                 def printTotalBlocks(self):
                     print "Number of read blocks %04d" %self.nTotalBlocks
                 def printNumberOfBlock(self):
                     if self.flagIsNewBlock:
                         print "Block No. %04d, Total blocks %04d -> %s" %(self.basicHeaderObj.dataBlock, self.nTotalBlocks, self.dataOut.datatime.ctime())
                         self.dataOut.blocknow = self.basicHeaderObj.dataBlock
                 def printInfo(self):
                     if self.__printInfo == False:
                         return
                     self.basicHeaderObj.printInfo()
                     self.systemHeaderObj.printInfo()
                     self.radarControllerHeaderObj.printInfo()
                     self.processingHeaderObj.printInfo()
                     self.__printInfo = False
                 def run(self, **kwargs):
                     if not(self.isConfig):
             #            self.dataOut = dataOut
                         self.setup(**kwargs)
                         self.isConfig = True
                     self.getData()
             class JRODataWriter(JRODataIO):
                 """
                 Esta clase permite escribir datos a archivos procesados (.r o ,pdata). La escritura
                 de los datos siempre se realiza por bloques.
                 """
                 blockIndex = 0
                 path = None
                 setFile = None
                 profilesPerBlock = None
                 blocksPerFile = None
                 nWriteBlocks = 0
                 def __init__(self, dataOut=None):
                     raise ValueError, "Not implemented"
                 def hasAllDataInBuffer(self):
                     raise ValueError, "Not implemented"
                 def setBlockDimension(self):
                     raise ValueError, "Not implemented"
                 def writeBlock(self):
                     raise ValueError, "No implemented"
                 def putData(self):
                     raise ValueError, "No implemented"
                 def setBasicHeader(self):
                     self.basicHeaderObj.size = self.basicHeaderSize #bytes
                     self.basicHeaderObj.version = self.versionFile
                     self.basicHeaderObj.dataBlock = self.nTotalBlocks
                     utc = numpy.floor(self.dataOut.utctime)
                     milisecond  = (self.dataOut.utctime - utc)* 1000.0
                     self.basicHeaderObj.utc = utc
                     self.basicHeaderObj.miliSecond = milisecond
                     self.basicHeaderObj.timeZone = self.dataOut.timeZone
                     self.basicHeaderObj.dstFlag = self.dataOut.dstFlag
                     self.basicHeaderObj.errorCount = self.dataOut.errorCount
                 def setFirstHeader(self):
                     """
                     Obtiene una copia del First Header
                     Affected:
                         self.basicHeaderObj
                         self.systemHeaderObj
                         self.radarControllerHeaderObj
                         self.processingHeaderObj self.
                     Return:
                         None
                     """
                     raise ValueError, "No implemented"
                 def __writeFirstHeader(self):
                     """
                     Escribe el primer header del file es decir el Basic header y el Long header (SystemHeader, RadarControllerHeader, ProcessingHeader)
                     Affected:
                         __dataType
                     Return:
                         None
                     """
             #        CALCULAR PARAMETROS
                     sizeLongHeader = self.systemHeaderObj.size + self.radarControllerHeaderObj.size + self.processingHeaderObj.size
                     self.basicHeaderObj.size = self.basicHeaderSize + sizeLongHeader
                     self.basicHeaderObj.write(self.fp)
                     self.systemHeaderObj.write(self.fp)
                     self.radarControllerHeaderObj.write(self.fp)
                     self.processingHeaderObj.write(self.fp)
                     self.dtype = self.dataOut.dtype
                 def __setNewBlock(self):
                     """
                     Si es un nuevo file escribe el First Header caso contrario escribe solo el Basic Header
                     Return:
 :    si no pudo escribir nada
 :    Si escribio el Basic el First Header
                     """
                     if self.fp == None:
                         self.setNextFile()
                     if self.flagIsNewFile:
                         return 1
                     if self.blockIndex < self.processingHeaderObj.dataBlocksPerFile:
                         self.basicHeaderObj.write(self.fp)
                         return 1
                     if not( self.setNextFile() ):
                         return 0
                     return 1
                 def writeNextBlock(self):
                     """
                     Selecciona el bloque siguiente de datos y los escribe en un file
                     Return:
 :    Si no hizo pudo escribir el bloque de datos
 :    Si no pudo escribir el bloque de datos
                     """
                     if not( self.__setNewBlock() ):
                         return 0
                     self.writeBlock()
                     return 1
                 def setNextFile(self):
                     """
                     Determina el siguiente file que sera escrito
                     Affected:
                         self.filename
                         self.subfolder
                         self.fp
                         self.setFile
                         self.flagIsNewFile
                     Return:
 :    Si el archivo no puede ser escrito
 :    Si el archivo esta listo para ser escrito
                     """
                     ext = self.ext
                     path = self.path
                     if self.fp != None:
                         self.fp.close()
                     timeTuple = time.localtime( self.dataOut.utctime)
                     subfolder = 'd%4.4d%3.3d' % (timeTuple.tm_year,timeTuple.tm_yday)
                     fullpath = os.path.join( path, subfolder )
                     if not( os.path.exists(fullpath) ):
                         os.mkdir(fullpath)
                         self.setFile = -1 #inicializo mi contador de seteo
                     else:
                         filesList = os.listdir( fullpath )
                         if len( filesList ) > 0:
                             filesList = sorted( filesList, key=str.lower )
                             filen = filesList[-1]
                             # el filename debera tener el siguiente formato
                             # 0 1234 567 89A BCDE (hex)
                             # x YYYY DDD SSS .ext
                             if isNumber( filen[8:11] ):
                                 self.setFile = int( filen[8:11] ) #inicializo mi contador de seteo al seteo del ultimo file
                             else:
                                 self.setFile = -1
                         else:
                             self.setFile = -1 #inicializo mi contador de seteo
                     setFile = self.setFile
                     setFile += 1
                     file = '%s%4.4d%3.3d%3.3d%s' % (self.optchar,
                                                     timeTuple.tm_year,
                                                     timeTuple.tm_yday,
                                                     setFile,
                                                     ext )
                     filename = os.path.join( path, subfolder, file )
                     fp = open( filename,'wb' )
                     self.blockIndex = 0
                     #guardando atributos
                     self.filename = filename
                     self.subfolder = subfolder
                     self.fp = fp
                     self.setFile = setFile
                     self.flagIsNewFile = 1
                     self.setFirstHeader()
                     print 'Writing the file: %s'%self.filename
                     self.__writeFirstHeader()
                     return 1
                 def setup(self, dataOut, path, blocksPerFile, profilesPerBlock=64, set=0, ext=None):
                     """
                     Setea el tipo de formato en la cual sera guardada la data y escribe el First Header
                     Inputs:
                         path      :    el path destino en el cual se escribiran los files a crear
                         format    :    formato en el cual sera salvado un file
                         set       :    el setebo del file
                     Return:
 :    Si no realizo un buen seteo
 :    Si realizo un buen seteo
                     """
                     if ext == None:
                         ext = self.ext
                     ext = ext.lower()
                     self.ext = ext
                     self.path = path
                     self.setFile = set - 1
                     self.blocksPerFile = blocksPerFile
                     self.profilesPerBlock = profilesPerBlock
                     self.dataOut = dataOut
                     if not(self.setNextFile()):
                         print "There isn't a next file"
                         return 0
                     self.setBlockDimension()
                     return 1
                 def run(self, dataOut, **kwargs):
                     if not(self.isConfig):
                         self.setup(dataOut, **kwargs)
                         self.isConfig = True
                     self.putData()

schainpy/model/io/jroIO_voltage.py +6 -1

             '''
             '''
             import numpy
             from jroIO_base import LOCALTIME, JRODataReader, JRODataWriter
             from model.proc.jroproc_base import ProcessingUnit, Operation
             from model.data.jroheaderIO import PROCFLAG, BasicHeader, SystemHeader, RadarControllerHeader, ProcessingHeader
             from model.data.jrodata import Voltage
             class VoltageReader(JRODataReader, ProcessingUnit):
                 """
                 Esta clase permite leer datos de voltage desde archivos en formato rawdata (.r). La lectura
                 de los datos siempre se realiza por bloques. Los datos leidos (array de 3 dimensiones:
                 perfiles*alturas*canales) son almacenados en la variable "buffer".
                                          perfiles * alturas * canales
                 Esta clase contiene instancias (objetos) de las clases BasicHeader, SystemHeader,
                 RadarControllerHeader y Voltage. Los tres primeros se usan para almacenar informacion de la
                 cabecera de datos (metadata), y el cuarto (Voltage) para obtener y almacenar un perfil de
                 datos desde el "buffer" cada vez que se ejecute el metodo "getData".
                 Example:
                     dpath = "/home/myuser/data"
                     startTime = datetime.datetime(2010,1,20,0,0,0,0,0,0)
                     endTime = datetime.datetime(2010,1,21,23,59,59,0,0,0)
                     readerObj = VoltageReader()
                     readerObj.setup(dpath, startTime, endTime)
                     while(True):
                         #to get one profile
                         profile =  readerObj.getData()
                         #print the profile
                         print profile
                         #If you want to see all datablock
                         print readerObj.datablock
                         if readerObj.flagNoMoreFiles:
                             break
                 """
                 ext = ".r"
                 optchar = "D"
                 dataOut = None
                 def __init__(self):
                     """
                     Inicializador de la clase VoltageReader para la lectura de datos de voltage.
                     Input:
                         dataOut    :    Objeto de la clase Voltage. Este objeto sera utilizado para
                                           almacenar un perfil de datos cada vez que se haga un requerimiento
                                           (getData). El perfil sera obtenido a partir del buffer de datos,
                                           si el buffer esta vacio se hara un nuevo proceso de lectura de un
                                           bloque de datos.
                                           Si este parametro no es pasado se creara uno internamente.
                     Variables afectadas:
                         self.dataOut
                     Return:
                         None
                     """
                     ProcessingUnit.__init__(self)
                     self.isConfig = False
                     self.datablock = None
                     self.utc = 0
                     self.ext = ".r"
                     self.optchar = "D"
                     self.basicHeaderObj = BasicHeader(LOCALTIME)
                     self.systemHeaderObj = SystemHeader()
                     self.radarControllerHeaderObj = RadarControllerHeader()
                     self.processingHeaderObj = ProcessingHeader()
                     self.online = 0
                     self.fp = None
                     self.idFile = None
                     self.dtype = None
                     self.fileSizeByHeader = None
                     self.filenameList = []
                     self.filename = None
                     self.fileSize = None
                     self.firstHeaderSize = 0
                     self.basicHeaderSize = 24
                     self.pathList = []
                     self.filenameList = []
                     self.lastUTTime = 0
                     self.maxTimeStep = 30
                     self.flagNoMoreFiles = 0
                     self.set = 0
                     self.path = None
                     self.profileIndex = 2**32-1
                     self.delay  = 3   #seconds
                     self.nTries  = 3  #quantity tries
                     self.nFiles = 3   #number of files for searching
                     self.nReadBlocks = 0
                     self.flagIsNewFile = 1
                     self.__isFirstTimeOnline = 1
             #         self.ippSeconds = 0
                     self.flagTimeBlock = 0
                     self.flagIsNewBlock = 0
                     self.nTotalBlocks = 0
                     self.blocksize = 0
                     self.dataOut = self.createObjByDefault()
                 def createObjByDefault(self):
                     dataObj = Voltage()
                     return dataObj
                 def __hasNotDataInBuffer(self):
                     if self.profileIndex >= self.processingHeaderObj.profilesPerBlock:
                         return 1
                     return 0
                 def getBlockDimension(self):
                     """
                     Obtiene la cantidad de puntos a leer por cada bloque de datos
                     Affected:
                         self.blocksize
                     Return:
                         None
                     """
                     pts2read = self.processingHeaderObj.profilesPerBlock * self.processingHeaderObj.nHeights * self.systemHeaderObj.nChannels
                     self.blocksize = pts2read
                 def readBlock(self):
                     """
                     readBlock lee el bloque de datos desde la posicion actual del puntero del archivo
                     (self.fp) y actualiza todos los parametros relacionados al bloque de datos
                     (metadata + data). La data leida es almacenada en el buffer y el contador del buffer
                     es seteado a 0
                     Inputs:
                         None
                     Return:
                         None
                     Affected:
                         self.profileIndex
                         self.datablock
                         self.flagIsNewFile
                         self.flagIsNewBlock
                         self.nTotalBlocks
                     Exceptions:
                         Si un bloque leido no es un bloque valido
                     """
                     current_pointer_location = self.fp.tell()
                     junk = numpy.fromfile( self.fp, self.dtype, self.blocksize )
                     try:
                         junk = junk.reshape( (self.processingHeaderObj.profilesPerBlock, self.processingHeaderObj.nHeights, self.systemHeaderObj.nChannels) )
                     except:
                         #print "The read block (%3d) has not enough data" %self.nReadBlocks
                         if self.waitDataBlock(pointer_location=current_pointer_location):
                             junk = numpy.fromfile( self.fp, self.dtype, self.blocksize )
                             junk = junk.reshape( (self.processingHeaderObj.profilesPerBlock, self.processingHeaderObj.nHeights, self.systemHeaderObj.nChannels) )
             #             return 0
                     junk = numpy.transpose(junk, (2,0,1))
                     self.datablock = junk['real'] + junk['imag']*1j
                     self.profileIndex = 0
                     self.flagIsNewFile = 0
                     self.flagIsNewBlock = 1
                     self.nTotalBlocks += 1
                     self.nReadBlocks += 1
                     return 1
                 def getFirstHeader(self):
                     self.dataOut.systemHeaderObj = self.systemHeaderObj.copy()
                     self.dataOut.radarControllerHeaderObj = self.radarControllerHeaderObj.copy()
             #         self.dataOut.ippSeconds = self.ippSeconds
                     self.dataOut.timeInterval = self.radarControllerHeaderObj.ippSeconds * self.processingHeaderObj.nCohInt
                     if self.radarControllerHeaderObj.code != None:
                         self.dataOut.nCode = self.radarControllerHeaderObj.nCode
                         self.dataOut.nBaud = self.radarControllerHeaderObj.nBaud
                         self.dataOut.code = self.radarControllerHeaderObj.code
                     self.dataOut.dtype = self.dtype
                     self.dataOut.nProfiles = self.processingHeaderObj.profilesPerBlock
                     xf = self.processingHeaderObj.firstHeight + self.processingHeaderObj.nHeights*self.processingHeaderObj.deltaHeight
                     self.dataOut.heightList = numpy.arange(self.processingHeaderObj.firstHeight, xf, self.processingHeaderObj.deltaHeight)
                     self.dataOut.channelList = range(self.systemHeaderObj.nChannels)
                     self.dataOut.nCohInt = self.processingHeaderObj.nCohInt
                     self.dataOut.flagShiftFFT = False
                     self.dataOut.flagDecodeData = False #asumo q la data no esta decodificada
                     self.dataOut.flagDeflipData = False #asumo q la data no esta sin flip
                     self.dataOut.flagShiftFFT = False
                 def getData(self):
                     """
                     getData obtiene una unidad de datos del buffer de lectura y la copia a la clase "Voltage"
                     con todos los parametros asociados a este (metadata). cuando no hay datos en el buffer de
                     lectura es necesario hacer una nueva lectura de los bloques de datos usando "readNextBlock"
                     Ademas incrementa el contador del buffer en 1.
                     Return:
                         data    :    retorna un perfil de voltages (alturas * canales) copiados desde el
                                      buffer. Si no hay mas archivos a leer retorna None.
                     Variables afectadas:
                         self.dataOut
                         self.profileIndex
                     Affected:
                         self.dataOut
                         self.profileIndex
                         self.flagTimeBlock
                         self.flagIsNewBlock
                     """
                     if self.flagNoMoreFiles:
                         self.dataOut.flagNoData = True
                         print 'Process finished'
                         return 0
                     self.flagTimeBlock = 0
                     self.flagIsNewBlock = 0
                     if self.__hasNotDataInBuffer():
                         if not( self.readNextBlock() ):
                             return 0
                         self.getFirstHeader()
                     if self.datablock == None:
                         self.dataOut.flagNoData = True
                         return 0
+                    if self.getblock:
+                        self.dataOut.data = self.datablock
+                        self.profileIndex = self.processingHeaderObj.profilesPerBlock
+                    else:
                         self.dataOut.data = self.datablock[:,self.profileIndex,:]
+                        self.profileIndex += 1
                     self.dataOut.flagNoData = False
                     self.getBasicHeader()
-                    self.profileIndex += 1
                     self.dataOut.realtime = self.online
                     return self.dataOut.data
             class VoltageWriter(JRODataWriter, Operation):
                 """
                 Esta clase permite escribir datos de voltajes a archivos procesados (.r). La escritura
                 de los datos siempre se realiza por bloques.
                 """
                 ext = ".r"
                 optchar = "D"
                 shapeBuffer = None
                 def __init__(self):
                     """
                     Inicializador de la clase VoltageWriter para la escritura de datos de espectros.
                     Affected:
                         self.dataOut
                     Return: None
                     """
                     Operation.__init__(self)
                     self.nTotalBlocks = 0
                     self.profileIndex = 0
                     self.isConfig = False
                     self.fp = None
                     self.flagIsNewFile = 1
                     self.nTotalBlocks = 0
                     self.flagIsNewBlock = 0
                     self.setFile = None
                     self.dtype = None
                     self.path = None
                     self.filename = None
                     self.basicHeaderObj = BasicHeader(LOCALTIME)
                     self.systemHeaderObj = SystemHeader()
                     self.radarControllerHeaderObj = RadarControllerHeader()
                     self.processingHeaderObj = ProcessingHeader()
                 def hasAllDataInBuffer(self):
                     if self.profileIndex >= self.processingHeaderObj.profilesPerBlock:
                         return 1
                     return 0
                 def setBlockDimension(self):
                     """
                     Obtiene las formas dimensionales del los subbloques de datos que componen un bloque
                     Affected:
                         self.shape_spc_Buffer
                         self.shape_cspc_Buffer
                         self.shape_dc_Buffer
                     Return: None
                     """
                     self.shapeBuffer = (self.processingHeaderObj.profilesPerBlock,
                                         self.processingHeaderObj.nHeights,
                                         self.systemHeaderObj.nChannels)
                     self.datablock = numpy.zeros((self.systemHeaderObj.nChannels,
                                                  self.processingHeaderObj.profilesPerBlock,
                                                  self.processingHeaderObj.nHeights),
                                                  dtype=numpy.dtype('complex64'))
                 def writeBlock(self):
                     """
                     Escribe el buffer en el file designado
                     Affected:
                         self.profileIndex
                         self.flagIsNewFile
                         self.flagIsNewBlock
                         self.nTotalBlocks
                         self.blockIndex
                     Return: None
                     """
                     data = numpy.zeros( self.shapeBuffer, self.dtype )
                     junk = numpy.transpose(self.datablock, (1,2,0))
                     data['real'] = junk.real
                     data['imag'] = junk.imag
                     data = data.reshape( (-1) )
                     data.tofile( self.fp )
                     self.datablock.fill(0)
                     self.profileIndex = 0
                     self.flagIsNewFile = 0
                     self.flagIsNewBlock = 1
                     self.blockIndex += 1
                     self.nTotalBlocks += 1
                 def putData(self):
                     """
                     Setea un bloque de datos y luego los escribe en un file
                     Affected:
                         self.flagIsNewBlock
                         self.profileIndex
                     Return:
 :    Si no hay data o no hay mas files que puedan escribirse
 :    Si se escribio la data de un bloque en un file
                     """
                     if self.dataOut.flagNoData:
                         return 0
                     self.flagIsNewBlock = 0
                     if self.dataOut.flagTimeBlock:
                         self.datablock.fill(0)
                         self.profileIndex = 0
                         self.setNextFile()
                     if self.profileIndex == 0:
                         self.setBasicHeader()
                     self.datablock[:,self.profileIndex,:] = self.dataOut.data
                     self.profileIndex += 1
                     if self.hasAllDataInBuffer():
                         #if self.flagIsNewFile:
                         self.writeNextBlock()
             #            self.setFirstHeader()
                     return 1
                 def __getProcessFlags(self):
                     processFlags = 0
                     dtype0 = numpy.dtype([('real','<i1'),('imag','<i1')])
                     dtype1 = numpy.dtype([('real','<i2'),('imag','<i2')])
                     dtype2 = numpy.dtype([('real','<i4'),('imag','<i4')])
                     dtype3 = numpy.dtype([('real','<i8'),('imag','<i8')])
                     dtype4 = numpy.dtype([('real','<f4'),('imag','<f4')])
                     dtype5 = numpy.dtype([('real','<f8'),('imag','<f8')])
                     dtypeList = [dtype0, dtype1, dtype2, dtype3, dtype4, dtype5]
                     datatypeValueList =  [PROCFLAG.DATATYPE_CHAR,
                                        PROCFLAG.DATATYPE_SHORT,
                                        PROCFLAG.DATATYPE_LONG,
                                        PROCFLAG.DATATYPE_INT64,
                                        PROCFLAG.DATATYPE_FLOAT,
                                        PROCFLAG.DATATYPE_DOUBLE]
                     for index in range(len(dtypeList)):
                         if self.dataOut.dtype == dtypeList[index]:
                             dtypeValue = datatypeValueList[index]
                             break
                     processFlags += dtypeValue
                     if self.dataOut.flagDecodeData:
                         processFlags += PROCFLAG.DECODE_DATA
                     if self.dataOut.flagDeflipData:
                         processFlags += PROCFLAG.DEFLIP_DATA
                     if self.dataOut.code != None:
                         processFlags += PROCFLAG.DEFINE_PROCESS_CODE
                     if self.dataOut.nCohInt > 1:
                         processFlags += PROCFLAG.COHERENT_INTEGRATION
                     return processFlags
                 def __getBlockSize(self):
                     '''
                     Este metodos determina el cantidad de bytes para un bloque de datos de tipo Voltage
                     '''
                     dtype0 = numpy.dtype([('real','<i1'),('imag','<i1')])
                     dtype1 = numpy.dtype([('real','<i2'),('imag','<i2')])
                     dtype2 = numpy.dtype([('real','<i4'),('imag','<i4')])
                     dtype3 = numpy.dtype([('real','<i8'),('imag','<i8')])
                     dtype4 = numpy.dtype([('real','<f4'),('imag','<f4')])
                     dtype5 = numpy.dtype([('real','<f8'),('imag','<f8')])
                     dtypeList = [dtype0, dtype1, dtype2, dtype3, dtype4, dtype5]
                     datatypeValueList = [1,2,4,8,4,8]
                     for index in range(len(dtypeList)):
                         if self.dataOut.dtype == dtypeList[index]:
                             datatypeValue = datatypeValueList[index]
                             break
                     blocksize = int(self.dataOut.nHeights * self.dataOut.nChannels * self.profilesPerBlock * datatypeValue * 2)
                     return blocksize
                 def setFirstHeader(self):
                     """
                     Obtiene una copia del First Header
                     Affected:
                         self.systemHeaderObj
                         self.radarControllerHeaderObj
                         self.dtype
                     Return:
                         None
                     """
                     self.systemHeaderObj = self.dataOut.systemHeaderObj.copy()
                     self.systemHeaderObj.nChannels = self.dataOut.nChannels
                     self.radarControllerHeaderObj = self.dataOut.radarControllerHeaderObj.copy()
                     self.setBasicHeader()
                     processingHeaderSize = 40 # bytes
                     self.processingHeaderObj.dtype = 0 # Voltage
                     self.processingHeaderObj.blockSize = self.__getBlockSize()
                     self.processingHeaderObj.profilesPerBlock = self.profilesPerBlock
                     self.processingHeaderObj.dataBlocksPerFile = self.blocksPerFile
                     self.processingHeaderObj.nWindows = 1 #podria ser 1 o self.dataOut.processingHeaderObj.nWindows
                     self.processingHeaderObj.processFlags = self.__getProcessFlags()
                     self.processingHeaderObj.nCohInt = self.dataOut.nCohInt
                     self.processingHeaderObj.nIncohInt = 1 # Cuando la data de origen es de tipo Voltage
                     self.processingHeaderObj.totalSpectra = 0 # Cuando la data de origen es de tipo Voltage
             #         if self.dataOut.code != None:
             #             self.processingHeaderObj.code = self.dataOut.code
             #             self.processingHeaderObj.nCode = self.dataOut.nCode
             #             self.processingHeaderObj.nBaud = self.dataOut.nBaud
             #             codesize = int(8 + 4 * self.dataOut.nCode * self.dataOut.nBaud)
             #             processingHeaderSize += codesize
                     if self.processingHeaderObj.nWindows != 0:
                         self.processingHeaderObj.firstHeight = self.dataOut.heightList[0]
                         self.processingHeaderObj.deltaHeight = self.dataOut.heightList[1] - self.dataOut.heightList[0]
                         self.processingHeaderObj.nHeights = self.dataOut.nHeights
                         self.processingHeaderObj.samplesWin = self.dataOut.nHeights
                         processingHeaderSize += 12
                     self.processingHeaderObj.size = processingHeaderSize

schainpy/model/proc/jroproc_spectra.py +21 -119

             import numpy
             from jroproc_base import ProcessingUnit, Operation
             from model.data.jrodata import Spectra
             from model.data.jrodata import hildebrand_sekhon
             class SpectraProc(ProcessingUnit):
                 def __init__(self):
                     ProcessingUnit.__init__(self)
                     self.buffer = None
                     self.firstdatatime = None
                     self.profIndex = 0
                     self.dataOut = Spectra()
+                    self.id_min = None
+                    self.id_max = None
                 def __updateObjFromInput(self):
                     self.dataOut.timeZone = self.dataIn.timeZone
                     self.dataOut.dstFlag = self.dataIn.dstFlag
                     self.dataOut.errorCount = self.dataIn.errorCount
                     self.dataOut.useLocalTime = self.dataIn.useLocalTime
                     self.dataOut.radarControllerHeaderObj = self.dataIn.radarControllerHeaderObj.copy()
                     self.dataOut.systemHeaderObj = self.dataIn.systemHeaderObj.copy()
                     self.dataOut.channelList = self.dataIn.channelList
                     self.dataOut.heightList = self.dataIn.heightList
                     self.dataOut.dtype = numpy.dtype([('real','<f4'),('imag','<f4')])
             #        self.dataOut.nHeights = self.dataIn.nHeights
             #        self.dataOut.nChannels = self.dataIn.nChannels
                     self.dataOut.nBaud = self.dataIn.nBaud
                     self.dataOut.nCode = self.dataIn.nCode
                     self.dataOut.code = self.dataIn.code
                     self.dataOut.nProfiles = self.dataOut.nFFTPoints
             #        self.dataOut.channelIndexList = self.dataIn.channelIndexList
                     self.dataOut.flagTimeBlock = self.dataIn.flagTimeBlock
                     self.dataOut.utctime = self.firstdatatime
                     self.dataOut.flagDecodeData = self.dataIn.flagDecodeData #asumo q la data esta decodificada
                     self.dataOut.flagDeflipData = self.dataIn.flagDeflipData #asumo q la data esta sin flip
             #        self.dataOut.flagShiftFFT = self.dataIn.flagShiftFFT
                     self.dataOut.nCohInt = self.dataIn.nCohInt
                     self.dataOut.nIncohInt = 1
             #         self.dataOut.ippSeconds = self.dataIn.ippSeconds
                     self.dataOut.windowOfFilter = self.dataIn.windowOfFilter
                     self.dataOut.timeInterval = self.dataIn.timeInterval*self.dataOut.nFFTPoints*self.dataOut.nIncohInt
                     self.dataOut.frequency = self.dataIn.frequency
                     self.dataOut.realtime = self.dataIn.realtime
                 def __getFft(self):
                     """
                     Convierte valores de Voltaje a Spectra
                     Affected:
                         self.dataOut.data_spc
                         self.dataOut.data_cspc
                         self.dataOut.data_dc
                         self.dataOut.heightList
                         self.profIndex
                         self.buffer
                         self.dataOut.flagNoData
                     """
                     fft_volt = numpy.fft.fft(self.buffer,n=self.dataOut.nFFTPoints,axis=1)
                     fft_volt = fft_volt.astype(numpy.dtype('complex'))
                     dc = fft_volt[:,0,:]
                     #calculo de self-spectra
                     fft_volt = numpy.fft.fftshift(fft_volt,axes=(1,))
                     spc = fft_volt * numpy.conjugate(fft_volt)
                     spc = spc.real
                     blocksize = 0
                     blocksize += dc.size
                     blocksize += spc.size
                     cspc = None
                     pairIndex = 0
                     if self.dataOut.pairsList != None:
                         #calculo de cross-spectra
                         cspc = numpy.zeros((self.dataOut.nPairs, self.dataOut.nFFTPoints, self.dataOut.nHeights), dtype='complex')
                         for pair in self.dataOut.pairsList:
                             cspc[pairIndex,:,:] = fft_volt[pair[0],:,:] * numpy.conjugate(fft_volt[pair[1],:,:])
                             pairIndex += 1
                         blocksize += cspc.size
                     self.dataOut.data_spc = spc
                     self.dataOut.data_cspc = cspc
                     self.dataOut.data_dc = dc
                     self.dataOut.blockSize = blocksize
                     self.dataOut.flagShiftFFT = False
                 def run(self, nProfiles=None, nFFTPoints=None, pairsList=[], ippFactor=None):
                     self.dataOut.flagNoData = True
                     if self.dataIn.type == "Spectra":
                         self.dataOut.copy(self.dataIn)
                         return True
                     if self.dataIn.type == "Voltage":
                         if nFFTPoints == None:
                             raise ValueError, "This SpectraProc.run() need nFFTPoints input variable"
-                        nProfiles = nFFTPoints
+                        if nProfiles == None:
+                            raise ValueError, "This SpectraProc.run() need nProfiles input variable"
-            #            if pairsList == None:
-            #                nPairs = 0
-            #            else:
-            #                nPairs = len(pairsList)
                         if ippFactor == None:
                             ippFactor = 1
                         self.dataOut.ippFactor = ippFactor
                         self.dataOut.nFFTPoints = nFFTPoints
                         self.dataOut.pairsList = pairsList
-            #             self.dataOut.nPairs = nPairs
                         if self.buffer == None:
                             self.buffer = numpy.zeros((self.dataIn.nChannels,
                                                        nProfiles,
                                                        self.dataIn.nHeights),
                                                     dtype='complex')
+                            self.id_min = 0
+                            self.id_max = self.dataIn.data.shape[1]
+                        if len(self.dataIn.data.shape) == 2:
                             self.buffer[:,self.profIndex,:] = self.dataIn.data.copy()
                             self.profIndex += 1
+                        else:
+                            if self.dataIn.data.shape[1] == nProfiles:
+                                self.buffer = self.dataIn.data.copy()
+                                self.profIndex = nProfiles
+                            elif self.dataIn.data.shape[1] < nProfiles:
+                                self.buffer[:,self.id_min:self.id_max,:] = self.dataIn.data
+                                self.profIndex += self.dataIn.data.shape[1]
+                                self.id_min += self.dataIn.data.shape[1]
+                                self.id_max += self.dataIn.data.shape[1]
+                            else:
+                                raise ValueError, "The type object %s has %d profiles, it should be equal to %d profiles"%(self.dataIn.type,self.dataIn.data.shape[1],nProfiles)
+                                self.dataOut.flagNoData = True
+                                return 0
                         if self.firstdatatime == None:
                             self.firstdatatime = self.dataIn.utctime
                         if self.profIndex == nProfiles:
                             self.__updateObjFromInput()
                             self.__getFft()
                             self.dataOut.flagNoData = False
                             self.buffer = None
                             self.firstdatatime = None
                             self.profIndex = 0
                         return True
                     raise ValueError, "The type object %s is not valid"%(self.dataIn.type)
                 def selectChannels(self, channelList):
                     channelIndexList = []
                     for channel in channelList:
                         index = self.dataOut.channelList.index(channel)
                         channelIndexList.append(index)
                     self.selectChannelsByIndex(channelIndexList)
                 def selectChannelsByIndex(self, channelIndexList):
                     """
                     Selecciona un bloque de datos en base a canales segun el channelIndexList
                     Input:
                         channelIndexList    :    lista sencilla de canales a seleccionar por ej. [2,3,7]
                     Affected:
                         self.dataOut.data_spc
                         self.dataOut.channelIndexList
                         self.dataOut.nChannels
                     Return:
                         None
                     """
                     for channelIndex in channelIndexList:
                         if channelIndex not in self.dataOut.channelIndexList:
                             print channelIndexList
                             raise ValueError, "The value %d in channelIndexList is not valid" %channelIndex
             #         nChannels = len(channelIndexList)
                     data_spc = self.dataOut.data_spc[channelIndexList,:]
                     self.dataOut.data_spc = data_spc
                     self.dataOut.channelList = [self.dataOut.channelList[i] for i in channelIndexList]
             #        self.dataOut.nChannels = nChannels
                     return 1
                 def selectHeights(self, minHei, maxHei):
                     """
                     Selecciona un bloque de datos en base a un grupo de valores de alturas segun el rango
                     minHei <= height <= maxHei
                     Input:
                         minHei    :    valor minimo de altura a considerar
                         maxHei    :    valor maximo de altura a considerar
                     Affected:
                         Indirectamente son cambiados varios valores a travez del metodo selectHeightsByIndex
                     Return:
 si el metodo se ejecuto con exito caso contrario devuelve 0
                     """
                     if (minHei < self.dataOut.heightList[0]) or (minHei > maxHei):
                         raise ValueError, "some value in (%d,%d) is not valid" % (minHei, maxHei)
                     if (maxHei > self.dataOut.heightList[-1]):
                         maxHei = self.dataOut.heightList[-1]
             #            raise ValueError, "some value in (%d,%d) is not valid" % (minHei, maxHei)
                     minIndex = 0
                     maxIndex = 0
                     heights = self.dataOut.heightList
                     inda = numpy.where(heights >= minHei)
                     indb = numpy.where(heights <= maxHei)
                     try:
                         minIndex = inda[0][0]
                     except:
                         minIndex = 0
                     try:
                         maxIndex = indb[0][-1]
                     except:
                         maxIndex = len(heights)
                     self.selectHeightsByIndex(minIndex, maxIndex)
                     return 1
                 def getBeaconSignal(self, tauindex = 0, channelindex = 0, hei_ref=None):
                     newheis = numpy.where(self.dataOut.heightList>self.dataOut.radarControllerHeaderObj.Taus[tauindex])
                     if hei_ref != None:
                         newheis = numpy.where(self.dataOut.heightList>hei_ref)
                     minIndex = min(newheis[0])
                     maxIndex = max(newheis[0])
                     data_spc = self.dataOut.data_spc[:,:,minIndex:maxIndex+1]
                     heightList = self.dataOut.heightList[minIndex:maxIndex+1]
                     # determina indices
                     nheis = int(self.dataOut.radarControllerHeaderObj.txB/(self.dataOut.heightList[1]-self.dataOut.heightList[0]))
                     avg_dB = 10*numpy.log10(numpy.sum(data_spc[channelindex,:,:],axis=0))
                     beacon_dB = numpy.sort(avg_dB)[-nheis:]
                     beacon_heiIndexList = []
                     for val in avg_dB.tolist():
                         if val >= beacon_dB[0]:
                             beacon_heiIndexList.append(avg_dB.tolist().index(val))
                     #data_spc = data_spc[:,:,beacon_heiIndexList]
                     data_cspc = None
                     if self.dataOut.data_cspc != None:
                         data_cspc = self.dataOut.data_cspc[:,:,minIndex:maxIndex+1]
                         #data_cspc = data_cspc[:,:,beacon_heiIndexList]
                     data_dc = None
                     if self.dataOut.data_dc != None:
                         data_dc = self.dataOut.data_dc[:,minIndex:maxIndex+1]
                         #data_dc = data_dc[:,beacon_heiIndexList]
                     self.dataOut.data_spc = data_spc
                     self.dataOut.data_cspc = data_cspc
                     self.dataOut.data_dc = data_dc
                     self.dataOut.heightList = heightList
                     self.dataOut.beacon_heiIndexList = beacon_heiIndexList
                     return 1
                 def selectHeightsByIndex(self, minIndex, maxIndex):
                     """
                     Selecciona un bloque de datos en base a un grupo indices de alturas segun el rango
                     minIndex <= index <= maxIndex
                     Input:
                         minIndex    :    valor de indice minimo de altura a considerar
                         maxIndex    :    valor de indice maximo de altura a considerar
                     Affected:
                         self.dataOut.data_spc
                         self.dataOut.data_cspc
                         self.dataOut.data_dc
                         self.dataOut.heightList
                     Return:
 si el metodo se ejecuto con exito caso contrario devuelve 0
                     """
                     if (minIndex < 0) or (minIndex > maxIndex):
                         raise ValueError, "some value in (%d,%d) is not valid" % (minIndex, maxIndex)
                     if (maxIndex >= self.dataOut.nHeights):
                         maxIndex = self.dataOut.nHeights-1
             #            raise ValueError, "some value in (%d,%d) is not valid" % (minIndex, maxIndex)
             #         nHeights = maxIndex - minIndex + 1
                     #Spectra
                     data_spc = self.dataOut.data_spc[:,:,minIndex:maxIndex+1]
                     data_cspc = None
                     if self.dataOut.data_cspc != None:
                         data_cspc = self.dataOut.data_cspc[:,:,minIndex:maxIndex+1]
                     data_dc = None
                     if self.dataOut.data_dc != None:
                         data_dc = self.dataOut.data_dc[:,minIndex:maxIndex+1]
                     self.dataOut.data_spc = data_spc
                     self.dataOut.data_cspc = data_cspc
                     self.dataOut.data_dc = data_dc
                     self.dataOut.heightList = self.dataOut.heightList[minIndex:maxIndex+1]
                     return 1
                 def removeDC(self, mode = 2):
                     jspectra = self.dataOut.data_spc
                     jcspectra = self.dataOut.data_cspc
                     num_chan = jspectra.shape[0]
                     num_hei = jspectra.shape[2]
                     if jcspectra != None:
                         jcspectraExist = True
                         num_pairs = jcspectra.shape[0]
                     else:   jcspectraExist = False
                     freq_dc = jspectra.shape[1]/2
                     ind_vel = numpy.array([-2,-1,1,2]) + freq_dc
                     if ind_vel[0]<0:
                         ind_vel[range(0,1)] = ind_vel[range(0,1)] + self.num_prof
                     if mode == 1:
                         jspectra[:,freq_dc,:] = (jspectra[:,ind_vel[1],:] + jspectra[:,ind_vel[2],:])/2 #CORRECCION
                         if jcspectraExist:
                             jcspectra[:,freq_dc,:] = (jcspectra[:,ind_vel[1],:] + jcspectra[:,ind_vel[2],:])/2
                     if mode == 2:
                         vel = numpy.array([-2,-1,1,2])
                         xx = numpy.zeros([4,4])
                         for fil in range(4):
                             xx[fil,:] = vel[fil]**numpy.asarray(range(4))
                         xx_inv = numpy.linalg.inv(xx)
                         xx_aux = xx_inv[0,:]
                         for ich in range(num_chan):
                             yy = jspectra[ich,ind_vel,:]
                             jspectra[ich,freq_dc,:] = numpy.dot(xx_aux,yy)
                             junkid = jspectra[ich,freq_dc,:]<=0
                             cjunkid = sum(junkid)
                             if cjunkid.any():
                                 jspectra[ich,freq_dc,junkid.nonzero()] = (jspectra[ich,ind_vel[1],junkid] + jspectra[ich,ind_vel[2],junkid])/2
                         if jcspectraExist:
                             for ip in range(num_pairs):
                                 yy = jcspectra[ip,ind_vel,:]
                                 jcspectra[ip,freq_dc,:] = numpy.dot(xx_aux,yy)
                     self.dataOut.data_spc = jspectra
                     self.dataOut.data_cspc = jcspectra
                     return 1
                 def removeInterference(self,  interf = 2,hei_interf = None, nhei_interf = None, offhei_interf = None):
                     jspectra = self.dataOut.data_spc
                     jcspectra = self.dataOut.data_cspc
                     jnoise = self.dataOut.getNoise()
                     num_incoh = self.dataOut.nIncohInt
                     num_channel  = jspectra.shape[0]
                     num_prof  = jspectra.shape[1]
                     num_hei   = jspectra.shape[2]
                     #hei_interf
                     if hei_interf == None:
                         count_hei = num_hei/2   #Como es entero no importa
                         hei_interf = numpy.asmatrix(range(count_hei)) + num_hei - count_hei
                         hei_interf = numpy.asarray(hei_interf)[0]
                     #nhei_interf
                     if (nhei_interf == None):
                         nhei_interf = 5
                     if (nhei_interf < 1):
                         nhei_interf = 1
                     if (nhei_interf > count_hei):
                         nhei_interf = count_hei
                     if (offhei_interf == None):
                         offhei_interf = 0
                     ind_hei = range(num_hei)
             #         mask_prof = numpy.asarray(range(num_prof - 2)) + 1
             #         mask_prof[range(num_prof/2 - 1,len(mask_prof))] += 1
                     mask_prof = numpy.asarray(range(num_prof))
                     num_mask_prof = mask_prof.size
                     comp_mask_prof = [0, num_prof/2]
                     #noise_exist:    Determina si la variable jnoise ha sido definida y contiene la informacion del ruido de cada canal
                     if (jnoise.size < num_channel or numpy.isnan(jnoise).any()):
                         jnoise = numpy.nan
                     noise_exist = jnoise[0] < numpy.Inf
                     #Subrutina de Remocion de la Interferencia
                     for ich in range(num_channel):
                         #Se ordena los espectros segun su potencia (menor a mayor)
                         power = jspectra[ich,mask_prof,:]
                         power = power[:,hei_interf]
                         power = power.sum(axis = 0)
                         psort = power.ravel().argsort()
                         #Se estima la interferencia promedio en los Espectros de Potencia empleando
                         junkspc_interf = jspectra[ich,:,hei_interf[psort[range(offhei_interf, nhei_interf + offhei_interf)]]]
                         if noise_exist:
                         #    tmp_noise = jnoise[ich] / num_prof
                             tmp_noise = jnoise[ich]
                         junkspc_interf = junkspc_interf - tmp_noise
                         #junkspc_interf[:,comp_mask_prof] = 0
                         jspc_interf = junkspc_interf.sum(axis = 0) / nhei_interf
                         jspc_interf = jspc_interf.transpose()
                         #Calculando el espectro de interferencia promedio
                         noiseid =  numpy.where(jspc_interf <= tmp_noise/ math.sqrt(num_incoh))
                         noiseid = noiseid[0]
                         cnoiseid = noiseid.size
                         interfid = numpy.where(jspc_interf > tmp_noise/ math.sqrt(num_incoh))
                         interfid = interfid[0]
                         cinterfid = interfid.size
                         if (cnoiseid > 0):   jspc_interf[noiseid] = 0
                         #Expandiendo los perfiles a limpiar
                         if (cinterfid > 0):
                             new_interfid = (numpy.r_[interfid - 1, interfid, interfid + 1] + num_prof)%num_prof
                             new_interfid = numpy.asarray(new_interfid)
                             new_interfid = {x for x in new_interfid}
                             new_interfid = numpy.array(list(new_interfid))
                             new_cinterfid = new_interfid.size
                         else: new_cinterfid = 0
                         for ip in range(new_cinterfid):
                             ind = junkspc_interf[:,new_interfid[ip]].ravel().argsort()
                             jspc_interf[new_interfid[ip]] = junkspc_interf[ind[nhei_interf/2],new_interfid[ip]]
                         jspectra[ich,:,ind_hei] = jspectra[ich,:,ind_hei] - jspc_interf #Corregir indices
                         #Removiendo la interferencia del punto de mayor interferencia
                         ListAux = jspc_interf[mask_prof].tolist()
                         maxid = ListAux.index(max(ListAux))
                         if cinterfid > 0:
                             for ip in range(cinterfid*(interf == 2) - 1):
                                 ind = (jspectra[ich,interfid[ip],:] < tmp_noise*(1 + 1/math.sqrt(num_incoh))).nonzero()
                                 cind = len(ind)
                                 if (cind > 0):
                                     jspectra[ich,interfid[ip],ind] = tmp_noise*(1 + (numpy.random.uniform(cind) - 0.5)/math.sqrt(num_incoh))
                             ind = numpy.array([-2,-1,1,2])
                             xx = numpy.zeros([4,4])
                             for id1 in range(4):
                                 xx[:,id1] = ind[id1]**numpy.asarray(range(4))
                             xx_inv = numpy.linalg.inv(xx)
                             xx = xx_inv[:,0]
                             ind = (ind + maxid + num_mask_prof)%num_mask_prof
                             yy = jspectra[ich,mask_prof[ind],:]
                             jspectra[ich,mask_prof[maxid],:] = numpy.dot(yy.transpose(),xx)
                         indAux = (jspectra[ich,:,:] < tmp_noise*(1-1/math.sqrt(num_incoh))).nonzero()
                         jspectra[ich,indAux[0],indAux[1]] = tmp_noise * (1 - 1/math.sqrt(num_incoh))
                     #Remocion de Interferencia en el Cross Spectra
                     if jcspectra == None: return jspectra, jcspectra
                     num_pairs = jcspectra.size/(num_prof*num_hei)
                     jcspectra = jcspectra.reshape(num_pairs, num_prof, num_hei)
                     for ip in range(num_pairs):
                         #-------------------------------------------
                         cspower = numpy.abs(jcspectra[ip,mask_prof,:])
                         cspower = cspower[:,hei_interf]
                         cspower = cspower.sum(axis = 0)
                         cspsort = cspower.ravel().argsort()
                         junkcspc_interf = jcspectra[ip,:,hei_interf[cspsort[range(offhei_interf, nhei_interf + offhei_interf)]]]
                         junkcspc_interf = junkcspc_interf.transpose()
                         jcspc_interf = junkcspc_interf.sum(axis = 1)/nhei_interf
                         ind = numpy.abs(jcspc_interf[mask_prof]).ravel().argsort()
                         median_real = numpy.median(numpy.real(junkcspc_interf[mask_prof[ind[range(3*num_prof/4)]],:]))
                         median_imag = numpy.median(numpy.imag(junkcspc_interf[mask_prof[ind[range(3*num_prof/4)]],:]))
                         junkcspc_interf[comp_mask_prof,:] = numpy.complex(median_real, median_imag)
                         for iprof in range(num_prof):
                             ind = numpy.abs(junkcspc_interf[iprof,:]).ravel().argsort()
                             jcspc_interf[iprof] = junkcspc_interf[iprof, ind[nhei_interf/2]]
                         #Removiendo la Interferencia
                         jcspectra[ip,:,ind_hei] = jcspectra[ip,:,ind_hei] - jcspc_interf
                         ListAux = numpy.abs(jcspc_interf[mask_prof]).tolist()
                         maxid = ListAux.index(max(ListAux))
                         ind = numpy.array([-2,-1,1,2])
                         xx = numpy.zeros([4,4])
                         for id1 in range(4):
                             xx[:,id1] = ind[id1]**numpy.asarray(range(4))
                         xx_inv = numpy.linalg.inv(xx)
                         xx = xx_inv[:,0]
                         ind = (ind + maxid + num_mask_prof)%num_mask_prof
                         yy = jcspectra[ip,mask_prof[ind],:]
                         jcspectra[ip,mask_prof[maxid],:] = numpy.dot(yy.transpose(),xx)
                     #Guardar Resultados
                     self.dataOut.data_spc = jspectra
                     self.dataOut.data_cspc = jcspectra
                     return 1
                 def setRadarFrequency(self, frequency=None):
                     if frequency != None:
                         self.dataOut.frequency = frequency
                     return 1
                 def getNoise(self, minHei=None, maxHei=None, minVel=None, maxVel=None):
                     #validacion de rango
                     if minHei == None:
                         minHei = self.dataOut.heightList[0]
                     if maxHei == None:
                         maxHei = self.dataOut.heightList[-1]
                     if (minHei < self.dataOut.heightList[0]) or (minHei > maxHei):
                         print 'minHei: %.2f is out of the heights range'%(minHei)
                         print 'minHei is setting to %.2f'%(self.dataOut.heightList[0])
                         minHei = self.dataOut.heightList[0]
                     if (maxHei > self.dataOut.heightList[-1]) or (maxHei < minHei):
                         print 'maxHei: %.2f is out of the heights range'%(maxHei)
                         print 'maxHei is setting to %.2f'%(self.dataOut.heightList[-1])
                         maxHei = self.dataOut.heightList[-1]
                     # validacion de velocidades
                     velrange = self.dataOut.getVelRange(1)
                     if minVel == None:
                         minVel = velrange[0]
                     if maxVel == None:
                         maxVel = velrange[-1]
                     if (minVel < velrange[0]) or (minVel > maxVel):
                         print 'minVel: %.2f is out of the velocity range'%(minVel)
                         print 'minVel is setting to %.2f'%(velrange[0])
                         minVel = velrange[0]
                     if (maxVel > velrange[-1]) or (maxVel < minVel):
                         print 'maxVel: %.2f is out of the velocity range'%(maxVel)
                         print 'maxVel is setting to %.2f'%(velrange[-1])
                         maxVel = velrange[-1]
                     # seleccion de indices para rango
                     minIndex = 0
                     maxIndex = 0
                     heights = self.dataOut.heightList
                     inda = numpy.where(heights >= minHei)
                     indb = numpy.where(heights <= maxHei)
                     try:
                         minIndex = inda[0][0]
                     except:
                         minIndex = 0
                     try:
                         maxIndex = indb[0][-1]
                     except:
                         maxIndex = len(heights)
                     if (minIndex < 0) or (minIndex > maxIndex):
                         raise ValueError, "some value in (%d,%d) is not valid" % (minIndex, maxIndex)
                     if (maxIndex >= self.dataOut.nHeights):
                         maxIndex = self.dataOut.nHeights-1
                     # seleccion de indices para velocidades
                     indminvel = numpy.where(velrange >= minVel)
                     indmaxvel = numpy.where(velrange <= maxVel)
                     try:
                         minIndexVel = indminvel[0][0]
                     except:
                         minIndexVel = 0
                     try:
                         maxIndexVel = indmaxvel[0][-1]
                     except:
                         maxIndexVel = len(velrange)
                     #seleccion del espectro
                     data_spc = self.dataOut.data_spc[:,minIndexVel:maxIndexVel+1,minIndex:maxIndex+1]
                     #estimacion de ruido
                     noise = numpy.zeros(self.dataOut.nChannels)
                     for channel in range(self.dataOut.nChannels):
                         daux = data_spc[channel,:,:]
                         noise[channel] = hildebrand_sekhon(daux, self.dataOut.nIncohInt)
                     self.dataOut.noise_estimation = noise.copy()
                     return 1
             class IncohInt(Operation):
                 __profIndex = 0
                 __withOverapping  = False
                 __byTime = False
                 __initime = None
                 __lastdatatime = None
                 __integrationtime = None
                 __buffer_spc = None
                 __buffer_cspc = None
                 __buffer_dc = None
                 __dataReady = False
                 __timeInterval = None
                 n = None
                 def __init__(self):
                     Operation.__init__(self)
             #         self.isConfig = False
                 def setup(self, n=None, timeInterval=None, overlapping=False):
                     """
                     Set the parameters of the integration class.
                     Inputs:
                         n        :    Number of coherent integrations
                         timeInterval   :    Time of integration. If the parameter "n" is selected this one does not work
                         overlapping    :
                     """
                     self.__initime = None
                     self.__lastdatatime = 0
                     self.__buffer_spc = None
                     self.__buffer_cspc = None
                     self.__buffer_dc = None
                     self.__dataReady = False
                     if n == None and timeInterval == None:
                         raise ValueError, "n or timeInterval should be specified ..."
                     if n != None:
                         self.n = n
                         self.__byTime = False
                     else:
                         self.__integrationtime = timeInterval #if (type(timeInterval)!=integer) -> change this line
                         self.n = 9999
                         self.__byTime = True
                     if overlapping:
                         self.__withOverapping = True
                     else:
                         self.__withOverapping = False
                         self.__buffer_spc = 0
                         self.__buffer_cspc = 0
                         self.__buffer_dc = 0
                     self.__profIndex = 0
                 def putData(self, data_spc, data_cspc, data_dc):
                     """
                     Add a profile to the __buffer_spc and increase in one the __profileIndex
                     """
                     if not self.__withOverapping:
                         self.__buffer_spc += data_spc
                         if data_cspc == None:
                             self.__buffer_cspc = None
                         else:
                             self.__buffer_cspc += data_cspc
                         if data_dc == None:
                             self.__buffer_dc = None
                         else:
                             self.__buffer_dc += data_dc
                         self.__profIndex += 1
                         return
                     #Overlapping data
                     nChannels, nFFTPoints, nHeis = data_spc.shape
                     data_spc = numpy.reshape(data_spc, (1, nChannels, nFFTPoints, nHeis))
                     if data_cspc != None:
                         data_cspc = numpy.reshape(data_cspc, (1, -1, nFFTPoints, nHeis))
                     if data_dc != None:
                         data_dc = numpy.reshape(data_dc, (1, -1, nHeis))
                     #If the buffer is empty then it takes the data value
                     if self.__buffer_spc == None:
                         self.__buffer_spc = data_spc
                         if data_cspc == None:
                             self.__buffer_cspc = None
                         else:
                             self.__buffer_cspc += data_cspc
                         if data_dc == None:
                             self.__buffer_dc = None
                         else:
                             self.__buffer_dc += data_dc
                         self.__profIndex += 1
                         return
                     #If the buffer length is lower than n then stakcing the data value
                     if self.__profIndex < self.n:
                         self.__buffer_spc = numpy.vstack((self.__buffer_spc, data_spc))
                         if data_cspc != None:
                             self.__buffer_cspc = numpy.vstack((self.__buffer_cspc, data_cspc))
                         if data_dc != None:
                             self.__buffer_dc = numpy.vstack((self.__buffer_dc, data_dc))
                         self.__profIndex += 1
                         return
                     #If the buffer length is equal to n then replacing the last buffer value with the data value
                     self.__buffer_spc = numpy.roll(self.__buffer_spc, -1, axis=0)
                     self.__buffer_spc[self.n-1] = data_spc
                     if data_cspc != None:
                         self.__buffer_cspc = numpy.roll(self.__buffer_cspc, -1, axis=0)
                         self.__buffer_cspc[self.n-1] = data_cspc
                     if data_dc != None:
                         self.__buffer_dc = numpy.roll(self.__buffer_dc, -1, axis=0)
                         self.__buffer_dc[self.n-1] = data_dc
                     self.__profIndex = self.n
                     return
                 def pushData(self):
                     """
                     Return the sum of the last profiles and the profiles used in the sum.
                     Affected:
                     self.__profileIndex
                     """
                     data_spc = None
                     data_cspc  = None
                     data_dc = None
                     if not self.__withOverapping:
                         data_spc = self.__buffer_spc
                         data_cspc = self.__buffer_cspc
                         data_dc = self.__buffer_dc
                         n = self.__profIndex
                         self.__buffer_spc = 0
                         self.__buffer_cspc = 0
                         self.__buffer_dc = 0
                         self.__profIndex = 0
                         return data_spc, data_cspc, data_dc, n
                     #Integration with Overlapping
                     data_spc = numpy.sum(self.__buffer_spc, axis=0)
                     if self.__buffer_cspc != None:
                         data_cspc = numpy.sum(self.__buffer_cspc, axis=0)
                     if self.__buffer_dc != None:
                         data_dc = numpy.sum(self.__buffer_dc, axis=0)
                     n = self.__profIndex
                     return data_spc, data_cspc, data_dc, n
                 def byProfiles(self, *args):
                     self.__dataReady = False
                     avgdata_spc = None
                     avgdata_cspc = None
                     avgdata_dc = None
             #         n = None
                     self.putData(*args)
                     if self.__profIndex == self.n:
                         avgdata_spc, avgdata_cspc, avgdata_dc, n = self.pushData()
                         self.__dataReady = True
                     return avgdata_spc, avgdata_cspc, avgdata_dc
                 def byTime(self, datatime, *args):
                     self.__dataReady = False
                     avgdata_spc = None
                     avgdata_cspc = None
                     avgdata_dc = None
                     n = None
                     self.putData(*args)
                     if (datatime - self.__initime) >= self.__integrationtime:
                         avgdata_spc, avgdata_cspc, avgdata_dc, n = self.pushData()
                         self.n = n
                         self.__dataReady = True
                     return avgdata_spc, avgdata_cspc, avgdata_dc
                 def integrate(self, datatime, *args):
                     if self.__initime == None:
                         self.__initime = datatime
                     if self.__byTime:
                         avgdata_spc, avgdata_cspc, avgdata_dc = self.byTime(datatime, *args)
                     else:
                         avgdata_spc, avgdata_cspc, avgdata_dc = self.byProfiles(*args)
                     self.__lastdatatime = datatime
                     if avgdata_spc == None:
                         return None, None, None, None
                     avgdatatime = self.__initime
                     try:
                         self.__timeInterval = (self.__lastdatatime - self.__initime)/(self.n - 1)
                     except:
                         self.__timeInterval = self.__lastdatatime - self.__initime
                     deltatime = datatime -self.__lastdatatime
                     if not self.__withOverapping:
                         self.__initime = datatime
                     else:
                         self.__initime += deltatime
                     return avgdatatime, avgdata_spc, avgdata_cspc, avgdata_dc
                 def run(self, dataOut, n=None, timeInterval=None, overlapping=False):
                     if n==1:
                         dataOut.flagNoData = False
                         return
                     if not self.isConfig:
                         self.setup(n, timeInterval, overlapping)
                         self.isConfig = True
                     avgdatatime, avgdata_spc, avgdata_cspc, avgdata_dc = self.integrate(dataOut.utctime,
                                                                                         dataOut.data_spc,
                                                                                         dataOut.data_cspc,
                                                                                         dataOut.data_dc)
             #        dataOut.timeInterval *= n
                     dataOut.flagNoData = True
                     if self.__dataReady:
                         dataOut.data_spc = avgdata_spc
                         dataOut.data_cspc = avgdata_cspc
                         dataOut.data_dc = avgdata_dc
                         dataOut.nIncohInt *= self.n
                         dataOut.utctime = avgdatatime
                         #dataOut.timeInterval = dataOut.ippSeconds * dataOut.nCohInt * dataOut.nIncohInt * dataOut.nFFTPoints
                         dataOut.timeInterval = self.__timeInterval*self.n
                         dataOut.flagNoData = False
-            class ProfileConcat(Operation):
-                isConfig = False
-                buffer = None
-                def __init__(self):
-                    Operation.__init__(self)
-                    self.profileIndex = 0
-                def reset(self):
-                    self.buffer = numpy.zeros_like(self.buffer)
-                    self.start_index = 0
-                    self.times = 1
-                def setup(self, data, m, n=1):
-                    self.buffer = numpy.zeros((data.shape[0],data.shape[1]*m),dtype=type(data[0,0]))
-                    self.profiles = data.shape[1]
-                    self.start_index = 0
-                    self.times = 1
-                def concat(self, data):
-                    self.buffer[:,self.start_index:self.profiles*self.times] = data.copy()
-                    self.start_index = self.start_index + self.profiles
-                def run(self, dataOut, m):
-                    dataOut.flagNoData = True
-                    if not self.isConfig:
-                        self.setup(dataOut.data, m, 1)
-                        self.isConfig = True
-                    self.concat(dataOut.data)
-                    self.times += 1
-                    if self.times > m:
-                        dataOut.data = self.buffer
-                        self.reset()
-                        dataOut.flagNoData = False
-                        # se deben actualizar mas propiedades del header y del objeto dataOut, por ejemplo, las alturas
-                        deltaHeight = dataOut.heightList[1] - dataOut.heightList[0]
-                        xf = dataOut.heightList[0] + dataOut.nHeights * deltaHeight * 5
-                        dataOut.heightList = numpy.arange(dataOut.heightList[0], xf, deltaHeight)
-            class ProfileSelector(Operation):
-                profileIndex = None
-                # Tamanho total de los perfiles
-                nProfiles = None
-                def __init__(self):
-                    Operation.__init__(self)
-                    self.profileIndex = 0
-                def incIndex(self):
-                    self.profileIndex += 1
-                    if self.profileIndex >= self.nProfiles:
-                        self.profileIndex = 0
-                def isProfileInRange(self, minIndex, maxIndex):
-                    if self.profileIndex < minIndex:
-                        return False
-                    if self.profileIndex > maxIndex:
-                        return False
-                    return True
-                def isProfileInList(self, profileList):
-                    if self.profileIndex not in profileList:
-                        return False
-                    return True
-                def run(self, dataOut, profileList=None, profileRangeList=None, beam=None):
-                    dataOut.flagNoData = True
-                    self.nProfiles = dataOut.nProfiles
-                    if profileList != None:
-                        if self.isProfileInList(profileList):
-                            dataOut.flagNoData = False
-                        self.incIndex()
-                        return 1
-                    elif profileRangeList != None:
-                        minIndex = profileRangeList[0]
-                        maxIndex = profileRangeList[1]
-                        if self.isProfileInRange(minIndex, maxIndex):
-                            dataOut.flagNoData = False
-                        self.incIndex()
-                        return 1
-                    elif beam != None:
-                        if self.isProfileInList(dataOut.beamRangeDict[beam]):
-                            dataOut.flagNoData = False
-                        self.incIndex()
-                        return 1
-                    else:
-                        raise ValueError, "ProfileSelector needs profileList or profileRangeList"
-                    return 0

schainpy/model/proc/jroproc_voltage.py +241 -14

             import numpy
             from jroproc_base import ProcessingUnit, Operation
             from model.data.jrodata import Voltage
             class VoltageProc(ProcessingUnit):
                 def __init__(self):
                     ProcessingUnit.__init__(self)
             #         self.objectDict = {}
                     self.dataOut = Voltage()
                     self.flip = 1
                 def run(self):
                     if self.dataIn.type == 'AMISR':
                         self.__updateObjFromAmisrInput()
                     if self.dataIn.type == 'Voltage':
                         self.dataOut.copy(self.dataIn)
             #         self.dataOut.copy(self.dataIn)
                 def __updateObjFromAmisrInput(self):
                     self.dataOut.timeZone = self.dataIn.timeZone
                     self.dataOut.dstFlag = self.dataIn.dstFlag
                     self.dataOut.errorCount = self.dataIn.errorCount
                     self.dataOut.useLocalTime = self.dataIn.useLocalTime
                     self.dataOut.flagNoData = self.dataIn.flagNoData
                     self.dataOut.data = self.dataIn.data
                     self.dataOut.utctime = self.dataIn.utctime
                     self.dataOut.channelList = self.dataIn.channelList
                     self.dataOut.timeInterval = self.dataIn.timeInterval
                     self.dataOut.heightList = self.dataIn.heightList
                     self.dataOut.nProfiles = self.dataIn.nProfiles
                     self.dataOut.nCohInt = self.dataIn.nCohInt
                     self.dataOut.ippSeconds = self.dataIn.ippSeconds
                     self.dataOut.frequency = self.dataIn.frequency
             #
             #        pass#
             #
             #    def init(self):
             #
             #
             #        if self.dataIn.type == 'AMISR':
             #            self.__updateObjFromAmisrInput()
             #
             #        if self.dataIn.type == 'Voltage':
             #            self.dataOut.copy(self.dataIn)
             #        # No necesita copiar en cada init() los atributos de dataIn
             #        # la copia deberia hacerse por cada nuevo bloque de datos
                 def selectChannels(self, channelList):
                     channelIndexList = []
                     for channel in channelList:
                         index = self.dataOut.channelList.index(channel)
                         channelIndexList.append(index)
                     self.selectChannelsByIndex(channelIndexList)
                 def selectChannelsByIndex(self, channelIndexList):
                     """
                     Selecciona un bloque de datos en base a canales segun el channelIndexList
                     Input:
                         channelIndexList    :    lista sencilla de canales a seleccionar por ej. [2,3,7]
                     Affected:
                         self.dataOut.data
                         self.dataOut.channelIndexList
                         self.dataOut.nChannels
                         self.dataOut.m_ProcessingHeader.totalSpectra
                         self.dataOut.systemHeaderObj.numChannels
                         self.dataOut.m_ProcessingHeader.blockSize
                     Return:
                         None
                     """
                     for channelIndex in channelIndexList:
                         if channelIndex not in self.dataOut.channelIndexList:
                             print channelIndexList
                             raise ValueError, "The value %d in channelIndexList is not valid" %channelIndex
             #         nChannels = len(channelIndexList)
                     data = self.dataOut.data[channelIndexList,:]
                     self.dataOut.data = data
                     self.dataOut.channelList = [self.dataOut.channelList[i] for i in channelIndexList]
             #        self.dataOut.nChannels = nChannels
                     return 1
                 def selectHeights(self, minHei=None, maxHei=None):
                     """
                     Selecciona un bloque de datos en base a un grupo de valores de alturas segun el rango
                     minHei <= height <= maxHei
                     Input:
                         minHei    :    valor minimo de altura a considerar
                         maxHei    :    valor maximo de altura a considerar
                     Affected:
                         Indirectamente son cambiados varios valores a travez del metodo selectHeightsByIndex
                     Return:
 si el metodo se ejecuto con exito caso contrario devuelve 0
                     """
                     if minHei == None:
                         minHei = self.dataOut.heightList[0]
                     if maxHei == None:
                         maxHei = self.dataOut.heightList[-1]
                     if (minHei < self.dataOut.heightList[0]) or (minHei > maxHei):
                         raise ValueError, "some value in (%d,%d) is not valid" % (minHei, maxHei)
                     if (maxHei > self.dataOut.heightList[-1]):
                         maxHei = self.dataOut.heightList[-1]
             #            raise ValueError, "some value in (%d,%d) is not valid" % (minHei, maxHei)
                     minIndex = 0
                     maxIndex = 0
                     heights = self.dataOut.heightList
                     inda = numpy.where(heights >= minHei)
                     indb = numpy.where(heights <= maxHei)
                     try:
                         minIndex = inda[0][0]
                     except:
                         minIndex = 0
                     try:
                         maxIndex = indb[0][-1]
                     except:
                         maxIndex = len(heights)
                     self.selectHeightsByIndex(minIndex, maxIndex)
                     return 1
                 def selectHeightsByIndex(self, minIndex, maxIndex):
                     """
                     Selecciona un bloque de datos en base a un grupo indices de alturas segun el rango
                     minIndex <= index <= maxIndex
                     Input:
                         minIndex    :    valor de indice minimo de altura a considerar
                         maxIndex    :    valor de indice maximo de altura a considerar
                     Affected:
                         self.dataOut.data
                         self.dataOut.heightList
                     Return:
 si el metodo se ejecuto con exito caso contrario devuelve 0
                     """
                     if (minIndex < 0) or (minIndex > maxIndex):
                         raise ValueError, "some value in (%d,%d) is not valid" % (minIndex, maxIndex)
                     if (maxIndex >= self.dataOut.nHeights):
                         maxIndex = self.dataOut.nHeights-1
             #            raise ValueError, "some value in (%d,%d) is not valid" % (minIndex, maxIndex)
             #         nHeights = maxIndex - minIndex + 1
                     #voltage
                     data = self.dataOut.data[:,minIndex:maxIndex+1]
             #         firstHeight = self.dataOut.heightList[minIndex]
                     self.dataOut.data = data
                     self.dataOut.heightList = self.dataOut.heightList[minIndex:maxIndex+1]
                     return 1
-                def filterByHeights(self, window):
+                def filterByHeights(self, window, axis=1):
                     deltaHeight = self.dataOut.heightList[1] - self.dataOut.heightList[0]
                     if window == None:
                         window = (self.dataOut.radarControllerHeaderObj.txA/self.dataOut.radarControllerHeaderObj.nBaud) / deltaHeight
                     newdelta = deltaHeight * window
-                    r = self.dataOut.data.shape[1] % window
+                    r = self.dataOut.data.shape[axis] % window
-                    buffer = self.dataOut.data[:,0:self.dataOut.data.shape[1]-r]
+                    if axis == 1:
-                    buffer = buffer.reshape(self.dataOut.data.shape[0],self.dataOut.data.shape[1]/window,window)
+                        buffer = self.dataOut.data[:,0:self.dataOut.data.shape[axis]-r]
-                    buffer = numpy.sum(buffer,2)
+                        buffer = buffer.reshape(self.dataOut.data.shape[0],self.dataOut.data.shape[axis]/window,window)
-                    self.dataOut.data = buffer
+                        buffer = numpy.sum(buffer,axis+1)
+                    elif axis == 2:
+                        buffer = self.dataOut.data[:, :, 0:self.dataOut.data.shape[axis]-r]
+                        buffer = buffer.reshape(self.dataOut.data.shape[0],self.dataOut.data.shape[1],self.dataOut.data.shape[axis]/window,window)
+                        buffer = numpy.sum(buffer,axis+1)
+                    else:
+                        raise ValueError, "axis value should be 1 or 2, the input value %d is not valid" % (axis)
+                    self.dataOut.data = buffer.copy()
                     self.dataOut.heightList = numpy.arange(self.dataOut.heightList[0],newdelta*(self.dataOut.nHeights-r)/window,newdelta)
                     self.dataOut.windowOfFilter = window
+                    return 1
                 def deFlip(self):
                     self.dataOut.data *= self.flip
                     self.flip *= -1.
                 def setRadarFrequency(self, frequency=None):
                     if frequency != None:
                         self.dataOut.frequency = frequency
                     return 1
             class CohInt(Operation):
                 isConfig = False
                 __profIndex = 0
                 __withOverapping  = False
                 __byTime = False
                 __initime = None
                 __lastdatatime = None
                 __integrationtime = None
                 __buffer = None
                 __dataReady = False
                 n = None
                 def __init__(self):
                     Operation.__init__(self)
             #         self.isConfig = False
-                def setup(self, n=None, timeInterval=None, overlapping=False):
+                def setup(self, n=None, timeInterval=None, overlapping=False, byblock=False):
                     """
                     Set the parameters of the integration class.
                     Inputs:
                         n        :    Number of coherent integrations
                         timeInterval   :    Time of integration. If the parameter "n" is selected this one does not work
                         overlapping    :
                     """
                     self.__initime = None
                     self.__lastdatatime = 0
                     self.__buffer = None
                     self.__dataReady = False
+                    self.byblock = byblock
                     if n == None and timeInterval == None:
                         raise ValueError, "n or timeInterval should be specified ..."
                     if n != None:
                         self.n = n
                         self.__byTime = False
                     else:
                         self.__integrationtime = timeInterval * 60. #if (type(timeInterval)!=integer) -> change this line
                         self.n = 9999
                         self.__byTime = True
                     if overlapping:
                         self.__withOverapping = True
                         self.__buffer = None
                     else:
                         self.__withOverapping = False
                         self.__buffer = 0
                     self.__profIndex = 0
                 def putData(self, data):
                     """
                     Add a profile to the __buffer and increase in one the __profileIndex
                     """
                     if not self.__withOverapping:
                         self.__buffer += data.copy()
                         self.__profIndex += 1
                         return
                     #Overlapping data
                     nChannels, nHeis = data.shape
                     data = numpy.reshape(data, (1, nChannels, nHeis))
                     #If the buffer is empty then it takes the data value
                     if self.__buffer == None:
                         self.__buffer = data
                         self.__profIndex += 1
                         return
                     #If the buffer length is lower than n then stakcing the data value
                     if self.__profIndex < self.n:
                         self.__buffer = numpy.vstack((self.__buffer, data))
                         self.__profIndex += 1
                         return
                     #If the buffer length is equal to n then replacing the last buffer value with the data value
                     self.__buffer = numpy.roll(self.__buffer, -1, axis=0)
                     self.__buffer[self.n-1] = data
                     self.__profIndex = self.n
                     return
                 def pushData(self):
                     """
                     Return the sum of the last profiles and the profiles used in the sum.
                     Affected:
                     self.__profileIndex
                     """
                     if not self.__withOverapping:
                         data = self.__buffer
                         n = self.__profIndex
                         self.__buffer = 0
                         self.__profIndex = 0
                         return data, n
                     #Integration with Overlapping
                     data = numpy.sum(self.__buffer, axis=0)
                     n = self.__profIndex
                     return data, n
                 def byProfiles(self, data):
                     self.__dataReady = False
                     avgdata = None
             #         n = None
                     self.putData(data)
                     if self.__profIndex == self.n:
                         avgdata, n = self.pushData()
                         self.__dataReady = True
                     return avgdata
                 def byTime(self, data, datatime):
                     self.__dataReady = False
                     avgdata = None
                     n = None
                     self.putData(data)
                     if (datatime - self.__initime) >= self.__integrationtime:
                         avgdata, n = self.pushData()
                         self.n = n
                         self.__dataReady = True
                     return avgdata
                 def integrate(self, data, datatime=None):
                     if self.__initime == None:
                         self.__initime = datatime
                     if self.__byTime:
                         avgdata = self.byTime(data, datatime)
                     else:
                         avgdata = self.byProfiles(data)
                     self.__lastdatatime = datatime
                     if avgdata == None:
                         return None, None
                     avgdatatime = self.__initime
                     deltatime = datatime -self.__lastdatatime
                     if not self.__withOverapping:
                         self.__initime = datatime
                     else:
                         self.__initime += deltatime
                     return avgdata, avgdatatime
+                def integrateByBlock(self, dataOut):
+                    times = int(dataOut.data.shape[1]/self.n)
+                    avgdata = numpy.zeros((dataOut.nChannels, times, dataOut.nHeights), dtype=numpy.complex)
+                    id_min = 0
+                    id_max = self.n
+                    for i in range(times):
+                        junk = dataOut.data[:,id_min:id_max,:]
+                        avgdata[:,i,:] = junk.sum(axis=1)
+                        id_min += self.n
+                        id_max += self.n
+                    timeInterval = dataOut.ippSeconds*self.n
+                    avgdatatime = (times - 1) * timeInterval + dataOut.utctime
+                    self.__dataReady = True
+                    return avgdata, avgdatatime
                 def run(self, dataOut, **kwargs):
                     if not self.isConfig:
                         self.setup(**kwargs)
                         self.isConfig = True
+                    if self.byblock:
+                        avgdata, avgdatatime = self.integrateByBlock(dataOut)
+                    else:
                         avgdata, avgdatatime = self.integrate(dataOut.data, dataOut.utctime)
             #        dataOut.timeInterval *= n
                     dataOut.flagNoData = True
                     if self.__dataReady:
                         dataOut.data = avgdata
                         dataOut.nCohInt *= self.n
                         dataOut.utctime = avgdatatime
                         dataOut.timeInterval = dataOut.ippSeconds * dataOut.nCohInt
                         dataOut.flagNoData = False
             class Decoder(Operation):
                 isConfig = False
                 __profIndex = 0
                 code = None
                 nCode = None
                 nBaud = None
                 def __init__(self):
                     Operation.__init__(self)
+                    self.times = None
+                    self.osamp = None
+                    self.__setValues = False
             #         self.isConfig = False
-                def setup(self, code, shape):
+                def setup(self, code, shape, times, osamp):
                     self.__profIndex = 0
                     self.code = code
                     self.nCode = len(code)
                     self.nBaud = len(code[0])
+                    if times != None:
+                        self.times = times
+                    if ((osamp != None) and (osamp >1)):
+                        self.osamp = osamp
+                        self.code = numpy.repeat(code, repeats=self.osamp,axis=1)
+                        self.nBaud = self.nBaud*self.osamp
+                    if len(shape) == 2:
                         self.__nChannels, self.__nHeis = shape
                         __codeBuffer = numpy.zeros((self.nCode, self.__nHeis), dtype=numpy.complex)
                         __codeBuffer[:,0:self.nBaud] = self.code
                         self.fft_code = numpy.conj(numpy.fft.fft(__codeBuffer, axis=1))
                         self.ndatadec = self.__nHeis - self.nBaud + 1
                         self.datadecTime = numpy.zeros((self.__nChannels, self.ndatadec), dtype=numpy.complex)
+                    else:
+                        self.__nChannels, self.__nProfiles, self.__nHeis = shape
+                        self.ndatadec = self.__nHeis - self.nBaud + 1
+                        self.datadecTime = numpy.zeros((self.__nChannels, self.__nProfiles, self.ndatadec), dtype=numpy.complex)
                 def convolutionInFreq(self, data):
                     fft_code = self.fft_code[self.__profIndex].reshape(1,-1)
                     fft_data = numpy.fft.fft(data, axis=1)
                     conv = fft_data*fft_code
                     data = numpy.fft.ifft(conv,axis=1)
                     datadec = data[:,:-self.nBaud+1]
                     return datadec
                 def convolutionInFreqOpt(self, data):
                     fft_code = self.fft_code[self.__profIndex].reshape(1,-1)
                     data = cfunctions.decoder(fft_code, data)
                     datadec = data[:,:-self.nBaud+1]
                     return datadec
                 def convolutionInTime(self, data):
                     code = self.code[self.__profIndex]
                     for i in range(self.__nChannels):
                         self.datadecTime[i,:] = numpy.correlate(data[i,:], code, mode='valid')
                     return self.datadecTime
-                def run(self, dataOut, code=None, nCode=None, nBaud=None, mode = 0):
+                def convolutionByBlockInTime(self, data):
+                    junk = numpy.lib.stride_tricks.as_strided(self.code, (self.times, self.code.size), (0, self.code.itemsize))
+                    junk = junk.flatten()
+                    code_block = numpy.reshape(junk, (self.nCode*self.times,self.nBaud))
+                    for i in range(self.__nChannels):
+                        for j in range(self.__nProfiles):
+                            self.datadecTime[i,j,:] = numpy.correlate(data[i,j,:], code_block[j,:], mode='valid')
+                    return self.datadecTime
+                def run(self, dataOut, code=None, nCode=None, nBaud=None, mode = 0, times=None, osamp=None):
                     if code == None:
                         code = dataOut.code
                     else:
                         code = numpy.array(code).reshape(nCode,nBaud)
+                    if not self.isConfig:
+                        self.setup(code, dataOut.data.shape, times, osamp)
                         dataOut.code = code
                         dataOut.nCode = nCode
                         dataOut.nBaud = nBaud
                         dataOut.radarControllerHeaderObj.code = code
                         dataOut.radarControllerHeaderObj.nCode = nCode
                         dataOut.radarControllerHeaderObj.nBaud = nBaud
-                    if not self.isConfig:
-                        self.setup(code, dataOut.data.shape)
                         self.isConfig = True
                     if mode == 0:
                         datadec = self.convolutionInTime(dataOut.data)
                     if mode == 1:
                         datadec = self.convolutionInFreq(dataOut.data)
                     if mode == 2:
                         datadec = self.convolutionInFreqOpt(dataOut.data)
+                    if mode == 3:
+                        datadec = self.convolutionByBlockInTime(dataOut.data)
+                    if not(self.__setValues):
+                        dataOut.code = self.code
+                        dataOut.nCode = self.nCode
+                        dataOut.nBaud = self.nBaud
+                        dataOut.radarControllerHeaderObj.code = self.code
+                        dataOut.radarControllerHeaderObj.nCode = self.nCode
+                        dataOut.radarControllerHeaderObj.nBaud = self.nBaud
+                        self.__setValues = True
                     dataOut.data = datadec
                     dataOut.heightList = dataOut.heightList[0:self.ndatadec]
                     dataOut.flagDecodeData = True #asumo q la data no esta decodificada
                     if self.__profIndex == self.nCode-1:
                         self.__profIndex = 0
                         return 1
                     self.__profIndex += 1
                     return 1
             #        dataOut.flagDeflipData = True #asumo q la data no esta sin flip
+            class ProfileConcat(Operation):
+                isConfig = False
+                buffer = None
+                def __init__(self):
+                    Operation.__init__(self)
+                    self.profileIndex = 0
+                def reset(self):
+                    self.buffer = numpy.zeros_like(self.buffer)
+                    self.start_index = 0
+                    self.times = 1
+                def setup(self, data, m, n=1):
+                    self.buffer = numpy.zeros((data.shape[0],data.shape[1]*m),dtype=type(data[0,0]))
+                    self.profiles = data.shape[1]
+                    self.start_index = 0
+                    self.times = 1
+                def concat(self, data):
+                    self.buffer[:,self.start_index:self.profiles*self.times] = data.copy()
+                    self.start_index = self.start_index + self.profiles
+                def run(self, dataOut, m):
+                    dataOut.flagNoData = True
+                    if not self.isConfig:
+                        self.setup(dataOut.data, m, 1)
+                        self.isConfig = True
+                    self.concat(dataOut.data)
+                    self.times += 1
+                    if self.times > m:
+                        dataOut.data = self.buffer
+                        self.reset()
+                        dataOut.flagNoData = False
+                        # se deben actualizar mas propiedades del header y del objeto dataOut, por ejemplo, las alturas
+                        deltaHeight = dataOut.heightList[1] - dataOut.heightList[0]
+                        xf = dataOut.heightList[0] + dataOut.nHeights * deltaHeight * 5
+                        dataOut.heightList = numpy.arange(dataOut.heightList[0], xf, deltaHeight)
+            class ProfileSelector(Operation):
+                profileIndex = None
+                # Tamanho total de los perfiles
+                nProfiles = None
+                def __init__(self):
+                    Operation.__init__(self)
+                    self.profileIndex = 0
+                def incIndex(self):
+                    self.profileIndex += 1
+                    if self.profileIndex >= self.nProfiles:
+                        self.profileIndex = 0
+                def isProfileInRange(self, minIndex, maxIndex):
+                    if self.profileIndex < minIndex:
+                        return False
+                    if self.profileIndex > maxIndex:
+                        return False
+                    return True
+                def isProfileInList(self, profileList):
+                    if self.profileIndex not in profileList:
+                        return False
+                    return True
+                def run(self, dataOut, profileList=None, profileRangeList=None, beam=None, byblock=False):
+                    dataOut.flagNoData = True
+                    self.nProfiles = dataOut.nProfiles
+                    if byblock:
+                        if profileList != None:
+                            dataOut.data = dataOut.data[:,profileList,:]
+                            pass
+                        else:
+                            pmin = profileRangeList[0]
+                            pmax = profileRangeList[1]
+                            dataOut.data = dataOut.data[:,pmin:pmax+1,:]
+                        dataOut.flagNoData = False
+                        self.profileIndex = 0
+                        return 1
+                    if profileList != None:
+                        if self.isProfileInList(profileList):
+                            dataOut.flagNoData = False
+                        self.incIndex()
+                        return 1
+                    elif profileRangeList != None:
+                        minIndex = profileRangeList[0]
+                        maxIndex = profileRangeList[1]
+                        if self.isProfileInRange(minIndex, maxIndex):
+                            dataOut.flagNoData = False
+                        self.incIndex()
+                        return 1
+                    elif beam != None: #beam is only for AMISR data
+                        if self.isProfileInList(dataOut.beamRangeDict[beam]):
+                            dataOut.flagNoData = False
+                        self.incIndex()
+                        return 1
+                    else:
+                        raise ValueError, "ProfileSelector needs profileList or profileRangeList"
+                    return 0
+            class Reshaper(Operation):
+                def __init__(self):
+                    Operation.__init__(self)
+                    self.updateNewHeights = False
+                def run(self, dataOut, shape):
+                    shape_tuple = tuple(shape)
+                    dataOut.data = numpy.reshape(dataOut.data, shape_tuple)
+                    dataOut.flagNoData = False
+                    if not(self.updateNewHeights):
+                        old_nheights = dataOut.nHeights
+                        new_nheights = dataOut.data.shape[2]
+                        factor = new_nheights / old_nheights
+                        deltaHeight = dataOut.heightList[1] - dataOut.heightList[0]
+                        xf = dataOut.heightList[0] + dataOut.nHeights * deltaHeight * factor
+                        dataOut.heightList = numpy.arange(dataOut.heightList[0], xf, deltaHeight)
  No newline at end of file

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