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1 | { | |
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2 | "python.linting.pylintEnabled": true, | |
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3 | "git.ignoreLimitWarning": true | |
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4 | } No newline at end of file | |
| @@ -0,0 +1,88 | |||
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1 | import argparse | |
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2 | ||
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3 | from schainpy.controller import Project, multiSchain | |
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4 | ||
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5 | desc = "HF_EXAMPLE" | |
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6 | ||
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7 | controllerObj = Project() | |
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8 | ||
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9 | controllerObj.setup(id='191', name='test01', description=desc) | |
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10 | ||
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11 | readUnitConfObj = controllerObj.addReadUnit(datatype='SpectraReader', | |
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12 | path='/home/nanosat/data/sp1_f0', | |
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13 | startDate="2017/01/26", | |
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14 | endDate="2017/01/26", | |
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15 | startTime="00:00:00", | |
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16 | endTime="23:59:59", | |
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17 | online=0, | |
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18 | #set=1426485881, | |
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19 | walk=1, | |
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20 | verbose=1 | |
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21 | #timezone=-5*3600 | |
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22 | ) | |
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23 | ||
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24 | # #opObj11 = readUnitConfObj.addOperation(name='printNumberOfBlock') | |
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25 | # | |
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26 | # procUnitConfObj2 = controllerObj.addProcUnit(datatype='Spectra', inputId=readUnitConfObj.getId()) | |
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27 | # procUnitConfObj2.addParameter(name='nipp', value='5', format='int') | |
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28 | ||
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29 | procUnitConfObj3 = controllerObj.addProcUnit(datatype='ParametersProc', inputId=readUnitConfObj.getId()) | |
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30 | opObj11 = procUnitConfObj3.addOperation(name='SpectralMoments', optype='other') | |
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31 | ||
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32 | # | |
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33 | # opObj11 = procUnitConfObj1.addOperation(name='SpectraPlot', optype='other') | |
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34 | # opObj11.addParameter(name='id', value='1000', format='int') | |
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35 | # opObj11.addParameter(name='wintitle', value='HF_Jicamarca_Spc', format='str') | |
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36 | # opObj11.addParameter(name='channelList', value='0', format='intlist') | |
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37 | # opObj11.addParameter(name='zmin', value='-120', format='float') | |
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38 | # opObj11.addParameter(name='zmax', value='-70', format='float') | |
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39 | # opObj11.addParameter(name='save', value='1', format='int') | |
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40 | # opObj11.addParameter(name='figpath', value=figpath, format='str') | |
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41 | ||
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42 | opObj11 = procUnitConfObj3.addOperation(name='Parameters1Plot', optype='other') | |
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43 | # opObj11.addParameter(name='channelList', value='0', format='intList') | |
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44 | ||
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45 | opObj11.addParameter(name='id', value='2000', format='int') | |
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46 | # # opObj11.addParameter(name='colormap', value='0', format='bool') | |
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47 | opObj11.addParameter(name='onlySNR', value='1', format='bool') | |
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48 | opObj11.addParameter(name='DOP', value='0', format='bool') | |
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49 | opObj11.addParameter(name='SNR', value='1', format='bool') | |
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50 | opObj11.addParameter(name='SNRthresh', value='0', format='int') | |
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51 | opObj11.addParameter(name='SNRmin', value='-10', format='int') | |
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52 | opObj11.addParameter(name='SNRmax', value='30', format='int') | |
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53 | opObj11.addParameter(name='xmin', value='0', format='int') | |
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54 | opObj11.addParameter(name='xmax', value='24', format='int') | |
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55 | ||
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56 | # opObj12 = procUnitConfObj3.addOperation(name='ParametersPlot', optype='other') | |
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57 | # #opObj11.addParameter(name='channelList', value='0', format='intlist') | |
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58 | # opObj12.addParameter(name='id', value='301', format='int') | |
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59 | # opObj12.addParameter(name='xmin', value='0', format='float') | |
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60 | # opObj12.addParameter(name='xmax', value='24', format='float') | |
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61 | ||
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62 | # opObj11.addParameter(name='zmin', value='-110', format='float') | |
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63 | # opObj11.addParameter(name='zmax', value='-70', format='float') | |
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64 | # opObj11.addParameter(name='save', value='0', format='int') | |
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65 | # # opObj11.addParameter(name='figpath', value='/tmp/', format='str') | |
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66 | # | |
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67 | # opObj12 = procUnitConfObj3.addOperation(name='PublishData', optype='other') | |
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68 | # opObj12.addParameter(name='zeromq', value=1, format='int') | |
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69 | # opObj12.addParameter(name='verbose', value=0, format='bool') | |
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70 | ||
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71 | ||
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72 | # opObj13 = procUnitConfObj3.addOperation(name='PublishData', optype='other') | |
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73 | # opObj13.addParameter(name='zeromq', value=1, format='int') | |
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74 | # opObj13.addParameter(name='server', value="juanca", format='str') | |
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75 | ||
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76 | # opObj12.addParameter(name='delay', value=0, format='int') | |
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77 | ||
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78 | ||
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79 | # print "Escribiendo el archivo XML" | |
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80 | # controllerObj.writeXml(filename) | |
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81 | # print "Leyendo el archivo XML" | |
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82 | # controllerObj.readXml(filename) | |
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83 | ||
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84 | ||
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85 | # timeit.timeit('controllerObj.run()', number=2) | |
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86 | ||
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87 | controllerObj.start() | |
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88 | ||
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1 | You should install "digital_rf_hdf5" module if you want to read USRP data | |
| @@ -100,3 +100,9 ENV/ | |||
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100 | 100 | # eclipse |
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101 | 101 | .project |
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102 | 102 | .pydevproject |
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103 | ||
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104 | # vscode | |
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105 | ||
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106 | .vscode | |
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107 | ||
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108 | schainpy/scripts/ No newline at end of file | |
| @@ -1,1 +1,1 | |||
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1 |
<Project description="A schain project" id="191" name="project"><ReadUnit datatype="Voltage" id="1911" inputId="0" name="VoltageReader"><Operation id="19111" name="run" priority="1" type="self"><Parameter format="str" id="191111" name="datatype" value="VoltageReader" /><Parameter format="str" id="191112" name="path" value="/home/nanosat/schain" /><Parameter format="date" id="191113" name="startDate" value="1970/01/01" /><Parameter format="date" id="191114" name="endDate" value="2017/12/31" /><Parameter format="time" id="191115" name="startTime" value="00:00:00" /><Parameter format="time" id="191116" name="endTime" value="23:59:59" /><Parameter format="int" id="191118" name="walk" value="1" /><Parameter format="int" id="191119" name="verbose" value="1" /><Parameter format="int" id="191120" name="online" value="0" /></Operation></ReadUnit><ProcUnit datatype="Voltage" id="1912" inputId="1911" name="VoltageProc"><Operation id="19121" name="run" priority="1" type="self" /><Operation id="19122" name="ProfileSelector" priority="2" type="other"><Parameter format="intlist" id="191221" name="profileRangeList" value="120,183" /></Operation><Operation id="19123" name="RTIPlot" priority="3" type=" |
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1 | <Project description="A schain project" id="191" name="project"><ReadUnit datatype="VoltageReader" id="1911" inputId="0" name="VoltageReader"><Operation id="19111" name="run" priority="1" type="self"><Parameter format="str" id="191111" name="datatype" value="VoltageReader" /><Parameter format="str" id="191112" name="path" value="/home/nanosat/schain" /><Parameter format="date" id="191113" name="startDate" value="1970/01/01" /><Parameter format="date" id="191114" name="endDate" value="2017/12/31" /><Parameter format="time" id="191115" name="startTime" value="00:00:00" /><Parameter format="time" id="191116" name="endTime" value="23:59:59" /><Parameter format="int" id="191118" name="walk" value="1" /><Parameter format="int" id="191119" name="verbose" value="1" /><Parameter format="int" id="191120" name="online" value="0" /></Operation></ReadUnit><ProcUnit datatype="VoltageProc" id="1912" inputId="1911" name="VoltageProc"><Operation id="19121" name="run" priority="1" type="self" /><Operation id="19122" name="ProfileSelector" priority="2" type="other"><Parameter format="intlist" id="191221" name="profileRangeList" value="120,183" /></Operation><Operation id="19123" name="RTIPlot" priority="3" type="other"><Parameter format="str" id="191231" name="wintitle" value="Jicamarca Radio Observatory" /><Parameter format="int" id="191232" name="showprofile" value="0" /><Parameter format="int" id="191233" name="xmin" value="0" /><Parameter format="int" id="191234" name="xmax" value="24" /><Parameter format="str" id="191235" name="figpath" value="/home/nanosat/schain/figs" /><Parameter format="int" id="191236" name="wr_period" value="5" /><Parameter format="int" id="191237" name="exp_code" value="22" /></Operation></ProcUnit></Project> No newline at end of file | |
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1 | NO CONTENT: modified file |
| @@ -217,7 +217,6 class ParameterConf(): | |||
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217 | 217 | self.id = str(new_id) |
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218 | 218 | |
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219 | 219 | def setup(self, id, name, value, format='str'): |
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220 | ||
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221 | 220 | self.id = str(id) |
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222 | 221 | self.name = name |
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223 | 222 | if format == 'obj': |
| @@ -757,7 +756,8 class ReadUnitConf(ProcUnitConf): | |||
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757 | 756 | |
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758 | 757 | return self.ELEMENTNAME |
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759 | 758 | |
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760 |
def setup(self, id, name, datatype, path, startDate="", endDate="", startTime="", |
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759 | def setup(self, id, name, datatype, path='', startDate="", endDate="", startTime="", | |
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760 | endTime="", parentId=None, queue=None, server=None, **kwargs): | |
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761 | 761 | |
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762 | 762 | #Compatible with old signal chain version |
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763 | 763 | if datatype==None and name==None: |
| @@ -768,14 +768,13 class ReadUnitConf(ProcUnitConf): | |||
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768 | 768 | name = datatype |
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769 | 769 | else: |
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770 | 770 | name = '%sReader' %(datatype) |
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771 | ||
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772 | 771 | if datatype==None: |
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773 | 772 | datatype = name.replace('Reader','') |
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774 | 773 | |
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775 | 774 | self.id = id |
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776 | 775 | self.name = name |
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777 | 776 | self.datatype = datatype |
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778 | ||
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777 | if path != '': | |
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779 | 778 | self.path = os.path.abspath(path) |
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780 | 779 | self.startDate = startDate |
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781 | 780 | self.endDate = endDate |
| @@ -785,6 +784,7 class ReadUnitConf(ProcUnitConf): | |||
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785 | 784 | self.inputId = '0' |
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786 | 785 | self.parentId = parentId |
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787 | 786 | self.queue = queue |
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787 | self.server = server | |
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788 | 788 | self.addRunOperation(**kwargs) |
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789 | 789 | |
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790 | 790 | def update(self, datatype, path, startDate, endDate, startTime, endTime, parentId=None, name=None, **kwargs): |
| @@ -826,6 +826,7 class ReadUnitConf(ProcUnitConf): | |||
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826 | 826 | |
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827 | 827 | opObj = self.addOperation(name = 'run', optype = 'self') |
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828 | 828 | |
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829 | if self.server is None: | |
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829 | 830 | opObj.addParameter(name='datatype' , value=self.datatype, format='str') |
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830 | 831 | opObj.addParameter(name='path' , value=self.path, format='str') |
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831 | 832 | opObj.addParameter(name='startDate' , value=self.startDate, format='date') |
| @@ -833,9 +834,11 class ReadUnitConf(ProcUnitConf): | |||
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833 | 834 | opObj.addParameter(name='startTime' , value=self.startTime, format='time') |
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834 | 835 | opObj.addParameter(name='endTime' , value=self.endTime, format='time') |
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835 | 836 | opObj.addParameter(name='queue' , value=self.queue, format='obj') |
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836 | ||
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837 | 837 | for key, value in kwargs.items(): |
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838 | 838 | opObj.addParameter(name=key, value=value, format=type(value).__name__) |
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839 | else: | |
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840 | opObj.addParameter(name='server' , value=self.server, format='str') | |
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841 | ||
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839 | 842 | |
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840 | 843 | return opObj |
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841 | 844 | |
| @@ -115,7 +115,6 class BasicHeader(Header): | |||
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115 | 115 | dstFlag = None |
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116 | 116 | errorCount = None |
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117 | 117 | datatime = None |
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118 | ||
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119 | 118 | __LOCALTIME = None |
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120 | 119 | |
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121 | 120 | def __init__(self, useLocalTime=True): |
| @@ -133,9 +132,12 class BasicHeader(Header): | |||
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133 | 132 | |
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134 | 133 | def read(self, fp): |
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135 | 134 | |
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135 | self.length = 0 | |
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136 | 136 | try: |
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137 | if hasattr(fp, 'read'): | |
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137 | 138 | header = numpy.fromfile(fp, BASIC_STRUCTURE,1) |
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138 | ||
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139 | else: | |
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140 | header = numpy.fromstring(fp, BASIC_STRUCTURE,1) | |
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139 | 141 | except Exception, e: |
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140 | 142 | print "BasicHeader: " |
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141 | 143 | print e |
| @@ -153,6 +155,7 class BasicHeader(Header): | |||
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153 | 155 | if self.size < 24: |
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154 | 156 | return 0 |
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155 | 157 | |
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158 | self.length = header.nbytes | |
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156 | 159 | return 1 |
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157 | 160 | |
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158 | 161 | def write(self, fp): |
| @@ -197,13 +200,20 class SystemHeader(Header): | |||
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197 | 200 | self.pciDioBusWidth = pciDioBusWith |
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198 | 201 | |
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199 | 202 | def read(self, fp): |
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200 | ||
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203 | self.length = 0 | |
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204 | try: | |
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201 | 205 | startFp = fp.tell() |
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206 | except Exception, e: | |
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207 | startFp = None | |
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208 | pass | |
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202 | 209 | |
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203 | 210 | try: |
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211 | if hasattr(fp, 'read'): | |
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204 | 212 | header = numpy.fromfile(fp,SYSTEM_STRUCTURE,1) |
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213 | else: | |
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214 | header = numpy.fromstring(fp, SYSTEM_STRUCTURE,1) | |
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205 | 215 | except Exception, e: |
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206 | print "System Header: " + e | |
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216 | print "System Header: " + str(e) | |
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207 | 217 | return 0 |
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208 | 218 | |
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209 | 219 | self.size = header['nSize'][0] |
| @@ -213,6 +223,8 class SystemHeader(Header): | |||
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213 | 223 | self.adcResolution = header['nADCResolution'][0] |
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214 | 224 | self.pciDioBusWidth = header['nPCDIOBusWidth'][0] |
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215 | 225 | |
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226 | ||
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227 | if startFp is not None: | |
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216 | 228 | endFp = self.size + startFp |
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217 | 229 | |
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218 | 230 | if fp.tell() > endFp: |
| @@ -223,6 +235,7 class SystemHeader(Header): | |||
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223 | 235 | sys.stderr.write("Warning %s: Size value read from System Header size is greater than it has to be\n" %fp.name) |
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224 | 236 | return 0 |
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225 | 237 | |
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238 | self.length = header.nbytes | |
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226 | 239 | return 1 |
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227 | 240 | |
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228 | 241 | def write(self, fp): |
| @@ -299,13 +312,21 class RadarControllerHeader(Header): | |||
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299 | 312 | self.fClock = 0.15/(deltaHeight*1e-6) #0.15Km / (height * 1u) |
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300 | 313 | |
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301 | 314 | def read(self, fp): |
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302 | ||
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303 | ||
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315 | self.length = 0 | |
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316 | try: | |
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304 | 317 | startFp = fp.tell() |
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318 | except Exception, e: | |
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319 | startFp = None | |
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320 | pass | |
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321 | ||
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305 | 322 | try: |
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323 | if hasattr(fp, 'read'): | |
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306 | 324 | header = numpy.fromfile(fp,RADAR_STRUCTURE,1) |
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325 | else: | |
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326 | header = numpy.fromstring(fp, RADAR_STRUCTURE,1) | |
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327 | self.length += header.nbytes | |
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307 | 328 | except Exception, e: |
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308 | print "RadarControllerHeader: " + e | |
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329 | print "RadarControllerHeader: " + str(e) | |
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309 | 330 | return 0 |
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310 | 331 | |
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311 | 332 | size = int(header['nSize'][0]) |
| @@ -326,23 +347,64 class RadarControllerHeader(Header): | |||
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326 | 347 | self.rangeTxA = header['sRangeTxA'][0] |
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327 | 348 | self.rangeTxB = header['sRangeTxB'][0] |
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328 | 349 | |
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350 | try: | |
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351 | if hasattr(fp, 'read'): | |
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329 | 352 | samplingWindow = numpy.fromfile(fp,SAMPLING_STRUCTURE,self.nWindows) |
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330 | ||
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353 | else: | |
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354 | samplingWindow = numpy.fromstring(fp[self.length:], SAMPLING_STRUCTURE, self.nWindows) | |
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355 | self.length += samplingWindow.nbytes | |
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356 | except Exception, e: | |
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357 | print "RadarControllerHeader: " + str(e) | |
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358 | return 0 | |
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331 | 359 | self.nHeights = int(numpy.sum(samplingWindow['nsa'])) |
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332 | 360 | self.firstHeight = samplingWindow['h0'] |
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333 | 361 | self.deltaHeight = samplingWindow['dh'] |
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334 | 362 | self.samplesWin = samplingWindow['nsa'] |
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335 | 363 |
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364 | ||
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365 | ||
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366 | try: | |
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367 | if hasattr(fp, 'read'): | |
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336 | 368 | self.Taus = numpy.fromfile(fp,'<f4',self.numTaus) |
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369 | else: | |
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370 | self.Taus = numpy.fromstring(fp[self.length:], '<f4', self.numTaus) | |
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371 | self.length += self.Taus.nbytes | |
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372 | except Exception, e: | |
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373 | print "RadarControllerHeader: " + str(e) | |
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374 | return 0 | |
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375 | ||
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376 | ||
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337 | 377 | |
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338 | 378 | self.code_size = 0 |
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339 | 379 | if self.codeType != 0: |
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340 | self.nCode = int(numpy.fromfile(fp,'<u4',1)) | |
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341 | self.nBaud = int(numpy.fromfile(fp,'<u4',1)) | |
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342 | 380 | |
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381 | try: | |
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382 | if hasattr(fp, 'read'): | |
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383 | self.nCode = numpy.fromfile(fp, '<u4', 1) | |
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384 | self.length += self.nCode.nbytes | |
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385 | self.nBaud = numpy.fromfile(fp, '<u4', 1) | |
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386 | self.length += self.nBaud.nbytes | |
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387 | else: | |
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388 | self.nCode = numpy.fromstring(fp[self.length:], '<u4', 1)[0] | |
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389 | self.length += self.nCode.nbytes | |
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390 | self.nBaud = numpy.fromstring(fp[self.length:], '<u4', 1)[0] | |
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391 | self.length += self.nBaud.nbytes | |
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392 | except Exception, e: | |
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393 | print "RadarControllerHeader: " + str(e) | |
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394 | return 0 | |
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343 | 395 | code = numpy.empty([self.nCode,self.nBaud],dtype='i1') |
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396 | ||
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344 | 397 | for ic in range(self.nCode): |
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398 | try: | |
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399 | if hasattr(fp, 'read'): | |
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345 | 400 | temp = numpy.fromfile(fp,'u4',int(numpy.ceil(self.nBaud/32.))) |
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401 | else: | |
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402 | temp = numpy.fromstring(fp,'u4', int(numpy.ceil(self.nBaud/32.))) | |
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403 | self.length += temp.nbytes | |
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404 | except Exception, e: | |
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405 | print "RadarControllerHeader: " + str(e) | |
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406 | return 0 | |
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407 | ||
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346 | 408 | for ib in range(self.nBaud-1,-1,-1): |
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347 | 409 | code[ic,ib] = temp[ib/32]%2 |
|
|
348 | 410 | temp[ib/32] = temp[ib/32]/2 |
| @@ -355,7 +417,7 class RadarControllerHeader(Header): | |||
|
|
355 | 417 | # |
|
|
356 | 418 | # if self.line6Function == RCfunction.FLIP: |
|
|
357 | 419 | # self.flip2 = numpy.fromfile(fp,'<u4',1) |
|
|
358 | ||
|
|
420 | if startFp is not None: | |
|
|
359 | 421 | endFp = size + startFp |
|
|
360 | 422 | |
|
|
361 | 423 | if fp.tell() != endFp: |
| @@ -370,6 +432,7 class RadarControllerHeader(Header): | |||
|
|
370 | 432 | if fp.tell() < endFp: |
|
|
371 | 433 | sys.stderr.write("Warning %s: Size value read from Radar Controller header is greater than it has to be\n" %fp.name) |
|
|
372 | 434 | |
|
|
435 | ||
|
|
373 | 436 | return 1 |
|
|
374 | 437 | |
|
|
375 | 438 | def write(self, fp): |
| @@ -508,15 +571,23 class ProcessingHeader(Header): | |||
|
|
508 | 571 | self.flag_cspc = False |
|
|
509 | 572 | self.flag_decode = False |
|
|
510 | 573 | self.flag_deflip = False |
|
|
511 | ||
|
|
574 | self.length = 0 | |
|
|
512 | 575 | def read(self, fp): |
|
|
513 | ||
|
|
576 | self.length = 0 | |
|
|
577 | try: | |
|
|
514 | 578 | startFp = fp.tell() |
|
|
579 | except Exception, e: | |
|
|
580 | startFp = None | |
|
|
581 | pass | |
|
|
515 | 582 | |
|
|
516 | 583 | try: |
|
|
584 | if hasattr(fp, 'read'): | |
|
|
517 | 585 | header = numpy.fromfile(fp,PROCESSING_STRUCTURE,1) |
|
|
586 | else: | |
|
|
587 | header = numpy.fromstring(fp, PROCESSING_STRUCTURE, 1) | |
|
|
588 | self.length += header.nbytes | |
|
|
518 | 589 | except Exception, e: |
|
|
519 | print "ProcessingHeader: " + e | |
|
|
590 | print "ProcessingHeader: " + str(e) | |
|
|
520 | 591 | return 0 |
|
|
521 | 592 | |
|
|
522 | 593 | size = int(header['nSize'][0]) |
| @@ -530,14 +601,31 class ProcessingHeader(Header): | |||
|
|
530 | 601 | self.nIncohInt = int(header['nIncoherentIntegrations'][0]) |
|
|
531 | 602 | self.totalSpectra = int(header['nTotalSpectra'][0]) |
|
|
532 | 603 | |
|
|
604 | try: | |
|
|
605 | if hasattr(fp, 'read'): | |
|
|
533 | 606 | samplingWindow = numpy.fromfile(fp,SAMPLING_STRUCTURE,self.nWindows) |
|
|
607 | else: | |
|
|
608 | samplingWindow = numpy.fromstring(fp[self.length:], SAMPLING_STRUCTURE, self.nWindows) | |
|
|
609 | self.length += samplingWindow.nbytes | |
|
|
610 | except Exception, e: | |
|
|
611 | print "ProcessingHeader: " + str(e) | |
|
|
612 | return 0 | |
|
|
534 | 613 | |
|
|
535 | 614 | self.nHeights = int(numpy.sum(samplingWindow['nsa'])) |
|
|
536 | 615 | self.firstHeight = float(samplingWindow['h0'][0]) |
|
|
537 | 616 | self.deltaHeight = float(samplingWindow['dh'][0]) |
|
|
538 | 617 | self.samplesWin = samplingWindow['nsa'][0] |
|
|
539 | 618 | |
|
|
619 | ||
|
|
620 | try: | |
|
|
621 | if hasattr(fp, 'read'): | |
|
|
540 | 622 | self.spectraComb = numpy.fromfile(fp,'u1',2*self.totalSpectra) |
|
|
623 | else: | |
|
|
624 | self.spectraComb = numpy.fromstring(fp[self.length:], 'u1', 2*self.totalSpectra) | |
|
|
625 | self.length += self.spectraComb.nbytes | |
|
|
626 | except Exception, e: | |
|
|
627 | print "ProcessingHeader: " + str(e) | |
|
|
628 | return 0 | |
|
|
541 | 629 | |
|
|
542 | 630 | if ((self.processFlags & PROCFLAG.DEFINE_PROCESS_CODE) == PROCFLAG.DEFINE_PROCESS_CODE): |
|
|
543 | 631 | self.nCode = int(numpy.fromfile(fp,'<u4',1)) |
| @@ -583,8 +671,10 class ProcessingHeader(Header): | |||
|
|
583 | 671 | if nPairs > 0: |
|
|
584 | 672 | self.flag_cspc = True |
|
|
585 | 673 | |
|
|
586 | endFp = size + startFp | |
|
|
587 | 674 | |
|
|
675 | ||
|
|
676 | if startFp is not None: | |
|
|
677 | endFp = size + startFp | |
|
|
588 | 678 | if fp.tell() > endFp: |
|
|
589 | 679 | sys.stderr.write("Warning: Processing header size is lower than it has to be") |
|
|
590 | 680 | return 0 |
| @@ -11,8 +11,8 import numpy | |||
|
|
11 | 11 | import fnmatch |
|
|
12 | 12 | import inspect |
|
|
13 | 13 | import time, datetime |
|
|
14 | #import h5py | |
|
|
15 | 14 | import traceback |
|
|
15 | import zmq | |
|
|
16 | 16 | |
|
|
17 | 17 | try: |
|
|
18 | 18 | from gevent import sleep |
| @@ -994,12 +994,13 class JRODataReader(JRODataIO): | |||
|
|
994 | 994 | self.__isFirstTimeOnline = 0 |
|
|
995 | 995 | |
|
|
996 | 996 | def __setNewBlock(self): |
|
|
997 | ||
|
|
997 | #if self.server is None: | |
|
|
998 | 998 | if self.fp == None: |
|
|
999 | 999 | return 0 |
|
|
1000 | 1000 | |
|
|
1001 | 1001 | # if self.online: |
|
|
1002 | 1002 | # self.__jumpToLastBlock() |
|
|
1003 | print 'xxxx' | |
|
|
1003 | 1004 | |
|
|
1004 | 1005 | if self.flagIsNewFile: |
|
|
1005 | 1006 | self.lastUTTime = self.basicHeaderObj.utc |
| @@ -1011,19 +1012,22 class JRODataReader(JRODataIO): | |||
|
|
1011 | 1012 | return 0 |
|
|
1012 | 1013 | else: |
|
|
1013 | 1014 | return 1 |
|
|
1014 | ||
|
|
1015 | print 'xxxx' | |
|
|
1016 | #if self.server is None: | |
|
|
1015 | 1017 | currentSize = self.fileSize - self.fp.tell() |
|
|
1016 | 1018 | neededSize = self.processingHeaderObj.blockSize + self.basicHeaderSize |
|
|
1017 | ||
|
|
1018 | 1019 | if (currentSize >= neededSize): |
|
|
1019 | 1020 | self.basicHeaderObj.read(self.fp) |
|
|
1020 | 1021 | self.lastUTTime = self.basicHeaderObj.utc |
|
|
1021 | 1022 | return 1 |
|
|
1022 | ||
|
|
1023 | # else: | |
|
|
1024 | # self.basicHeaderObj.read(self.zHeader) | |
|
|
1025 | # self.lastUTTime = self.basicHeaderObj.utc | |
|
|
1026 | # return 1 | |
|
|
1023 | 1027 | if self.__waitNewBlock(): |
|
|
1024 | 1028 | self.lastUTTime = self.basicHeaderObj.utc |
|
|
1025 | 1029 | return 1 |
|
|
1026 | ||
|
|
1030 | #if self.server is None: | |
|
|
1027 | 1031 | if not(self.setNextFile()): |
|
|
1028 | 1032 | return 0 |
|
|
1029 | 1033 | |
| @@ -1041,9 +1045,11 class JRODataReader(JRODataIO): | |||
|
|
1041 | 1045 | |
|
|
1042 | 1046 | #Skip block out of startTime and endTime |
|
|
1043 | 1047 | while True: |
|
|
1048 | print 'cxxxx' | |
|
|
1044 | 1049 | if not(self.__setNewBlock()): |
|
|
1050 | print 'returning' | |
|
|
1045 | 1051 | return 0 |
|
|
1046 | ||
|
|
1052 | print 'dxxx' | |
|
|
1047 | 1053 | if not(self.readBlock()): |
|
|
1048 | 1054 | return 0 |
|
|
1049 | 1055 | |
| @@ -1274,8 +1280,21 class JRODataReader(JRODataIO): | |||
|
|
1274 | 1280 | skip=None, |
|
|
1275 | 1281 | cursor=None, |
|
|
1276 | 1282 | warnings=True, |
|
|
1277 |
verbose=True |
|
|
|
1278 | ||
|
|
1283 | verbose=True, | |
|
|
1284 | server=None): | |
|
|
1285 | if server is not None: | |
|
|
1286 | if 'tcp://' in server: | |
|
|
1287 | address = server | |
|
|
1288 | else: | |
|
|
1289 | address = 'ipc:///tmp/%s' % server | |
|
|
1290 | self.server = address | |
|
|
1291 | self.context = zmq.Context() | |
|
|
1292 | self.receiver = self.context.socket(zmq.PULL) | |
|
|
1293 | self.receiver.connect(self.server) | |
|
|
1294 | time.sleep(0.5) | |
|
|
1295 | print '[Starting] ReceiverData from {}'.format(self.server) | |
|
|
1296 | else: | |
|
|
1297 | self.server = None | |
|
|
1279 | 1298 | if path == None: |
|
|
1280 | 1299 | raise ValueError, "[Reading] The path is not valid" |
|
|
1281 | 1300 | |
| @@ -1304,7 +1323,6 class JRODataReader(JRODataIO): | |||
|
|
1304 | 1323 | self.path = path |
|
|
1305 | 1324 | self.foldercounter = foldercounter |
|
|
1306 | 1325 | last_set = None |
|
|
1307 | ||
|
|
1308 | 1326 | else: |
|
|
1309 | 1327 | print "[Reading] Searching files in offline mode ..." |
|
|
1310 | 1328 | pathList, filenameList = self.__searchFilesOffLine(path, startDate=startDate, endDate=endDate, |
| @@ -1457,6 +1475,7 class JRODataReader(JRODataIO): | |||
|
|
1457 | 1475 | skip=None, |
|
|
1458 | 1476 | cursor=None, |
|
|
1459 | 1477 | warnings=True, |
|
|
1478 | server=None, | |
|
|
1460 | 1479 | verbose=True, **kwargs): |
|
|
1461 | 1480 | |
|
|
1462 | 1481 | if not(self.isConfig): |
| @@ -1481,10 +1500,13 class JRODataReader(JRODataIO): | |||
|
|
1481 | 1500 | skip=skip, |
|
|
1482 | 1501 | cursor=cursor, |
|
|
1483 | 1502 | warnings=warnings, |
|
|
1503 | server=server, | |
|
|
1484 | 1504 | verbose=verbose) |
|
|
1485 | 1505 | self.isConfig = True |
|
|
1486 | ||
|
|
1506 | if server is None: | |
|
|
1487 | 1507 | self.getData() |
|
|
1508 | else: | |
|
|
1509 | self.getFromServer() | |
|
|
1488 | 1510 | |
|
|
1489 | 1511 | class JRODataWriter(JRODataIO): |
|
|
1490 | 1512 | |
| @@ -10,6 +10,9 from jroIO_base import LOCALTIME, JRODataReader, JRODataWriter | |||
|
|
10 | 10 | from schainpy.model.proc.jroproc_base import ProcessingUnit, Operation |
|
|
11 | 11 | from schainpy.model.data.jroheaderIO import PROCFLAG, BasicHeader, SystemHeader, RadarControllerHeader, ProcessingHeader |
|
|
12 | 12 | from schainpy.model.data.jrodata import Voltage |
|
|
13 | import zmq | |
|
|
14 | import tempfile | |
|
|
15 | from StringIO import StringIO | |
|
|
13 | 16 | # from _sha import blocksize |
|
|
14 | 17 | |
|
|
15 | 18 | class VoltageReader(JRODataReader, ProcessingUnit): |
| @@ -189,6 +192,7 class VoltageReader(JRODataReader, ProcessingUnit): | |||
|
|
189 | 192 | self.blocksize = pts2read |
|
|
190 | 193 | |
|
|
191 | 194 | |
|
|
195 | ||
|
|
192 | 196 | def readBlock(self): |
|
|
193 | 197 | """ |
|
|
194 | 198 | readBlock lee el bloque de datos desde la posicion actual del puntero del archivo |
| @@ -212,11 +216,23 class VoltageReader(JRODataReader, ProcessingUnit): | |||
|
|
212 | 216 | Exceptions: |
|
|
213 | 217 | Si un bloque leido no es un bloque valido |
|
|
214 | 218 | """ |
|
|
219 | ||
|
|
220 | print 'READ BLOCK' | |
|
|
221 | # if self.server is not None: | |
|
|
222 | # self.zBlock = self.receiver.recv() | |
|
|
223 | # self.zHeader = self.zBlock[:24] | |
|
|
224 | # self.zDataBlock = self.zBlock[24:] | |
|
|
225 | # junk = numpy.fromstring(self.zDataBlock, numpy.dtype([('real','<i4'),('imag','<i4')])) | |
|
|
226 | # self.processingHeaderObj.profilesPerBlock = 240 | |
|
|
227 | # self.processingHeaderObj.nHeights = 248 | |
|
|
228 | # self.systemHeaderObj.nChannels | |
|
|
229 | # else: | |
|
|
215 | 230 | current_pointer_location = self.fp.tell() |
|
|
216 | 231 | junk = numpy.fromfile( self.fp, self.dtype, self.blocksize ) |
|
|
217 | 232 | |
|
|
218 | 233 | try: |
|
|
219 | 234 | junk = junk.reshape( (self.processingHeaderObj.profilesPerBlock, self.processingHeaderObj.nHeights, self.systemHeaderObj.nChannels) ) |
|
|
235 | print'junked' | |
|
|
220 | 236 | except: |
|
|
221 | 237 | #print "The read block (%3d) has not enough data" %self.nReadBlocks |
|
|
222 | 238 | |
| @@ -301,6 +317,97 class VoltageReader(JRODataReader, ProcessingUnit): | |||
|
|
301 | 317 | |
|
|
302 | 318 | return |
|
|
303 | 319 | |
|
|
320 | def readFirstHeaderFromServer(self): | |
|
|
321 | ||
|
|
322 | self.getFirstHeader() | |
|
|
323 | ||
|
|
324 | self.firstHeaderSize = self.basicHeaderObj.size | |
|
|
325 | ||
|
|
326 | datatype = int(numpy.log2((self.processingHeaderObj.processFlags & PROCFLAG.DATATYPE_MASK))-numpy.log2(PROCFLAG.DATATYPE_CHAR)) | |
|
|
327 | if datatype == 0: | |
|
|
328 | datatype_str = numpy.dtype([('real','<i1'),('imag','<i1')]) | |
|
|
329 | elif datatype == 1: | |
|
|
330 | datatype_str = numpy.dtype([('real','<i2'),('imag','<i2')]) | |
|
|
331 | elif datatype == 2: | |
|
|
332 | datatype_str = numpy.dtype([('real','<i4'),('imag','<i4')]) | |
|
|
333 | elif datatype == 3: | |
|
|
334 | datatype_str = numpy.dtype([('real','<i8'),('imag','<i8')]) | |
|
|
335 | elif datatype == 4: | |
|
|
336 | datatype_str = numpy.dtype([('real','<f4'),('imag','<f4')]) | |
|
|
337 | elif datatype == 5: | |
|
|
338 | datatype_str = numpy.dtype([('real','<f8'),('imag','<f8')]) | |
|
|
339 | else: | |
|
|
340 | raise ValueError, 'Data type was not defined' | |
|
|
341 | ||
|
|
342 | self.dtype = datatype_str | |
|
|
343 | #self.ippSeconds = 2 * 1000 * self.radarControllerHeaderObj.ipp / self.c | |
|
|
344 | self.fileSizeByHeader = self.processingHeaderObj.dataBlocksPerFile * self.processingHeaderObj.blockSize + self.firstHeaderSize + self.basicHeaderSize*(self.processingHeaderObj.dataBlocksPerFile - 1) | |
|
|
345 | # self.dataOut.channelList = numpy.arange(self.systemHeaderObj.numChannels) | |
|
|
346 | # self.dataOut.channelIndexList = numpy.arange(self.systemHeaderObj.numChannels) | |
|
|
347 | self.getBlockDimension() | |
|
|
348 | ||
|
|
349 | ||
|
|
350 | def getFromServer(self): | |
|
|
351 | self.flagDiscontinuousBlock = 0 | |
|
|
352 | self.profileIndex = 0 | |
|
|
353 | self.flagIsNewBlock = 1 | |
|
|
354 | self.dataOut.flagNoData = False | |
|
|
355 | self.nTotalBlocks += 1 | |
|
|
356 | self.nReadBlocks += 1 | |
|
|
357 | self.blockPointer = 0 | |
|
|
358 | ||
|
|
359 | block = self.receiver.recv() | |
|
|
360 | ||
|
|
361 | self.basicHeaderObj.read(block[self.blockPointer:]) | |
|
|
362 | self.blockPointer += self.basicHeaderObj.length | |
|
|
363 | self.systemHeaderObj.read(block[self.blockPointer:]) | |
|
|
364 | self.blockPointer += self.systemHeaderObj.length | |
|
|
365 | self.radarControllerHeaderObj.read(block[self.blockPointer:]) | |
|
|
366 | self.blockPointer += self.radarControllerHeaderObj.length | |
|
|
367 | self.processingHeaderObj.read(block[self.blockPointer:]) | |
|
|
368 | self.blockPointer += self.processingHeaderObj.length | |
|
|
369 | self.readFirstHeaderFromServer() | |
|
|
370 | ||
|
|
371 | timestamp = self.basicHeaderObj.get_datatime() | |
|
|
372 | print '[Reading] - Block {} - {}'.format(self.nTotalBlocks, timestamp) | |
|
|
373 | current_pointer_location = self.blockPointer | |
|
|
374 | junk = numpy.fromstring( block[self.blockPointer:], self.dtype, self.blocksize ) | |
|
|
375 | ||
|
|
376 | try: | |
|
|
377 | junk = junk.reshape( (self.processingHeaderObj.profilesPerBlock, self.processingHeaderObj.nHeights, self.systemHeaderObj.nChannels) ) | |
|
|
378 | except: | |
|
|
379 | #print "The read block (%3d) has not enough data" %self.nReadBlocks | |
|
|
380 | if self.waitDataBlock(pointer_location=current_pointer_location): | |
|
|
381 | junk = numpy.fromstring( block[self.blockPointer:], self.dtype, self.blocksize ) | |
|
|
382 | junk = junk.reshape( (self.processingHeaderObj.profilesPerBlock, self.processingHeaderObj.nHeights, self.systemHeaderObj.nChannels) ) | |
|
|
383 | # return 0 | |
|
|
384 | ||
|
|
385 | #Dimensions : nChannels, nProfiles, nSamples | |
|
|
386 | ||
|
|
387 | junk = numpy.transpose(junk, (2,0,1)) | |
|
|
388 | self.datablock = junk['real'] + junk['imag'] * 1j | |
|
|
389 | self.profileIndex = 0 | |
|
|
390 | if self.selBlocksize == None: self.selBlocksize = self.dataOut.nProfiles | |
|
|
391 | if self.selBlocktime != None: | |
|
|
392 | if self.dataOut.nCohInt is not None: | |
|
|
393 | nCohInt = self.dataOut.nCohInt | |
|
|
394 | else: | |
|
|
395 | nCohInt = 1 | |
|
|
396 | self.selBlocksize = int(self.dataOut.nProfiles*round(self.selBlocktime/(nCohInt*self.dataOut.ippSeconds*self.dataOut.nProfiles))) | |
|
|
397 | self.dataOut.data = self.datablock[:,self.profileIndex:self.profileIndex+self.selBlocksize,:] | |
|
|
398 | datasize = self.dataOut.data.shape[1] | |
|
|
399 | if datasize < self.selBlocksize: | |
|
|
400 | buffer = numpy.zeros((self.dataOut.data.shape[0], self.selBlocksize, self.dataOut.data.shape[2]), dtype = 'complex') | |
|
|
401 | buffer[:,:datasize,:] = self.dataOut.data | |
|
|
402 | self.dataOut.data = buffer | |
|
|
403 | self.profileIndex = blockIndex | |
|
|
404 | ||
|
|
405 | self.dataOut.flagDataAsBlock = True | |
|
|
406 | self.flagIsNewBlock = 1 | |
|
|
407 | self.dataOut.realtime = self.online | |
|
|
408 | ||
|
|
409 | return self.dataOut.data | |
|
|
410 | ||
|
|
304 | 411 | def getData(self): |
|
|
305 | 412 | """ |
|
|
306 | 413 | getData obtiene una unidad de datos del buffer de lectura, un perfil, y la copia al objeto self.dataOut |
| @@ -337,24 +444,19 class VoltageReader(JRODataReader, ProcessingUnit): | |||
|
|
337 | 444 | self.flagDiscontinuousBlock |
|
|
338 | 445 | self.flagIsNewBlock |
|
|
339 | 446 | """ |
|
|
340 | ||
|
|
341 | 447 | if self.flagNoMoreFiles: |
|
|
342 | 448 | self.dataOut.flagNoData = True |
|
|
343 | 449 | print 'Process finished' |
|
|
344 | 450 | return 0 |
|
|
345 | ||
|
|
346 | 451 | self.flagDiscontinuousBlock = 0 |
|
|
347 | 452 | self.flagIsNewBlock = 0 |
|
|
348 | ||
|
|
349 | 453 | if self.__hasNotDataInBuffer(): |
|
|
350 | ||
|
|
351 | 454 | if not( self.readNextBlock() ): |
|
|
352 | 455 | return 0 |
|
|
353 | 456 | |
|
|
354 | 457 | self.getFirstHeader() |
|
|
355 | 458 | |
|
|
356 | 459 | self.reshapeData() |
|
|
357 | ||
|
|
358 | 460 | if self.datablock is None: |
|
|
359 | 461 | self.dataOut.flagNoData = True |
|
|
360 | 462 | return 0 |
| @@ -513,10 +513,10 class CohInt(Operation): | |||
|
|
513 | 513 | self.__dataReady = True |
|
|
514 | 514 | return avgdata, avgdatatime |
|
|
515 | 515 | |
|
|
516 | def run(self, dataOut, **kwargs): | |
|
|
517 | 516 | |
|
|
517 | def run(self, dataOut, n=None, timeInterval=None, overlapping=False, byblock=False, **kwargs): | |
|
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518 | 518 | if not self.isConfig: |
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519 | self.setup(**kwargs) | |
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519 | self.setup(n=n, timeInterval=timeInterval, overlapping=overlapping, byblock=byblock, **kwargs) | |
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520 | 520 | self.isConfig = True |
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521 | 521 | |
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522 | 522 | if dataOut.flagDataAsBlock: |
| @@ -94,4 +94,4 if __name__ == '__main__': | |||
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94 | 94 | parser = argparse.ArgumentParser(description='Set number of parallel processes') |
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95 | 95 | parser.add_argument('--nProcess', default=1, type=int) |
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96 | 96 | args = parser.parse_args() |
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97 |
multiSchain(fiber, nProcess=args.nProcess, startDate='2017/01/26', endDate='2017/01/2 |
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97 | multiSchain(fiber, nProcess=args.nProcess, startDate='2017/01/26', endDate='2017/01/26') | |
| @@ -35,14 +35,11 def fiber(cursor, skip, q, dt): | |||
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35 | 35 | # opObj11 = procUnitConfObj3.addOperation(name='SpectralMoments', optype='other') |
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36 | 36 | |
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37 | 37 | # |
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38 |
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39 |
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40 |
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41 |
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42 |
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43 | # opObj11.addParameter(name='zmax', value='-70', format='float') | |
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44 | # opObj11.addParameter(name='save', value='1', format='int') | |
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45 | # opObj11.addParameter(name='figpath', value=figpath, format='str') | |
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38 | opObj11 = procUnitConfObj2.addOperation(name='RTIPlot', optype='other') | |
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39 | opObj11.addParameter(name='id', value='1000', format='int') | |
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40 | opObj11.addParameter(name='wintitle', value='HF_Jicamarca_Spc', format='str') | |
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41 | opObj11.addParameter(name='xmin', value='0', format='int') | |
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42 | opObj11.addParameter(name='xmax', value='24', format='int') | |
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46 | 43 | |
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47 | 44 | # opObj11 = procUnitConfObj3.addOperation(name='Parameters1Plot', optype='other') |
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48 | 45 | # opObj11.addParameter(name='channelList', value='0', format='intList') |
| @@ -67,8 +64,8 def fiber(cursor, skip, q, dt): | |||
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67 | 64 | # opObj11.addParameter(name='save', value='0', format='int') |
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68 | 65 | # # opObj11.addParameter(name='figpath', value='/tmp/', format='str') |
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69 | 66 | # |
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70 | opObj12 = procUnitConfObj2.addOperation(name='PublishData', optype='other') | |
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71 | opObj12.addParameter(name='zeromq', value=1, format='int') | |
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67 | # opObj12 = procUnitConfObj2.addOperation(name='PublishData', optype='other') | |
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68 | # opObj12.addParameter(name='zeromq', value=1, format='int') | |
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72 | 69 | # opObj12.addParameter(name='server', value='tcp://10.10.10.82:7000', format='str') |
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73 | 70 | |
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74 | 71 | |
| @@ -16,37 +16,17 if __name__ == '__main__': | |||
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16 | 16 | |
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17 | 17 | proc1 = controllerObj.addProcUnit(name='ReceiverData') |
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18 | 18 | proc1.addParameter(name='realtime', value='0', format='bool') |
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19 |
proc1.addParameter(name='plottypes', value=' |
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20 |
proc1.addParameter(name='throttle', value=' |
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19 | proc1.addParameter(name='plottypes', value='snr', format='str') | |
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20 | proc1.addParameter(name='throttle', value='5', format='int') | |
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21 | 21 | proc1.addParameter(name='interactive', value='0', format='bool') |
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22 | 22 | # proc1.addParameter(name='server', value='tcp://10.10.10.82:7000', format='str') |
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23 | 23 | ## TODO Agregar direccion de server de publicacion a graficos como variable |
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24 | ||
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25 | op1 = proc1.addOperation(name='PlotRTIData', optype='other') | |
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26 |
op |
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27 |
op |
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28 |
op |
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29 |
op |
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30 | # | |
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31 | op2 = proc1.addOperation(name='PlotCOHData', optype='other') | |
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32 | op2.addParameter(name='wintitle', value='Julia 150Km', format='str') | |
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33 | op2.addParameter(name='save', value='/home/nanosat/Pictures', format='str') | |
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34 | op2.addParameter(name='colormap', value='jet', format='str') | |
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35 | op2.addParameter(name='show', value='0', format='bool') | |
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36 | # # # | |
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37 | op6 = proc1.addOperation(name='PlotPHASEData', optype='other') | |
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38 | op6.addParameter(name='wintitle', value='Julia 150Km', format='str') | |
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39 | op6.addParameter(name='save', value='/home/nanosat/Pictures', format='str') | |
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40 | op6.addParameter(name='show', value='1', format='bool') | |
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41 | # # | |
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42 | # # proc2 = controllerObj.addProcUnit(name='ReceiverData') | |
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43 | # # proc2.addParameter(name='server', value='juanca', format='str') | |
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44 | # # proc2.addParameter(name='plottypes', value='snr,dop', format='str') | |
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45 | # # | |
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46 | # op3 = proc1.addOperation(name='PlotSNRData', optype='other') | |
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47 | # op3.addParameter(name='wintitle', value='Julia 150Km', format='str') | |
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48 | # op3.addParameter(name='save', value='/home/nanosat/Pictures', format='str') | |
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49 | # op3.addParameter(name='show', value='0', format='bool') | |
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24 | op3 = proc1.addOperation(name='PlotSNRData', optype='other') | |
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25 | op3.addParameter(name='wintitle', value='Julia 150Km', format='str') | |
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26 | op3.addParameter(name='zmax', value='30', format='int') | |
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27 | op3.addParameter(name='zmin', value='-10', format='int') | |
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28 | op3.addParameter(name='save', value='/home/nanosat/Pictures', format='str') | |
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29 | op3.addParameter(name='show', value='0', format='bool') | |
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50 | 30 | # # |
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51 | 31 | # op4 = proc1.addOperation(name='PlotDOPData', optype='other') |
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52 | 32 | # op4.addParameter(name='wintitle', value='Julia 150Km', format='str') |
| @@ -54,6 +34,28 if __name__ == '__main__': | |||
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54 | 34 | # op4.addParameter(name='show', value='0', format='bool') |
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55 | 35 | # op4.addParameter(name='colormap', value='jet', format='str') |
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56 | 36 | |
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37 | # op1 = proc1.addOperation(name='PlotRTIData', optype='other') | |
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38 | # op1.addParameter(name='wintitle', value='Julia 150Km', format='str') | |
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39 | # op1.addParameter(name='save', value='/home/nanosat/Pictures', format='str') | |
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40 | # op1.addParameter(name='show', value='0', format='bool') | |
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41 | # op1.addParameter(name='colormap', value='jet', format='str') | |
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42 | # # | |
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43 | # op2 = proc1.addOperation(name='PlotCOHData', optype='other') | |
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44 | # op2.addParameter(name='wintitle', value='Julia 150Km', format='str') | |
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45 | # op2.addParameter(name='save', value='/home/nanosat/Pictures', format='str') | |
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46 | # op2.addParameter(name='colormap', value='jet', format='str') | |
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47 | # op2.addParameter(name='show', value='0', format='bool') | |
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48 | # # # # | |
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49 | # op6 = proc1.addOperation(name='PlotPHASEData', optype='other') | |
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50 | # op6.addParameter(name='wintitle', value='Julia 150Km', format='str') | |
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51 | # op6.addParameter(name='save', value='/home/nanosat/Pictures', format='str') | |
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52 | # op6.addParameter(name='show', value='1', format='bool') | |
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53 | # # | |
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54 | # # proc2 = controllerObj.addProcUnit(name='ReceiverData') | |
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55 | # # proc2.addParameter(name='server', value='juanca', format='str') | |
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56 | # # proc2.addParameter(name='plottypes', value='snr,dop', format='str') | |
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57 | # # | |
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58 | ||
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57 | 59 | |
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58 | 60 | |
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59 | 61 | controllerObj.start() |
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1 | NO CONTENT: modified file |
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