diff --git a/schainpy/scripts/sophy_proc_15102024.py b/schainpy/scripts/sophy_proc_15102024.py new file mode 100644 index 0000000..fc1bb3c --- /dev/null +++ b/schainpy/scripts/sophy_proc_15102024.py @@ -0,0 +1,513 @@ +# SOPHY PROC script +import os, sys, json, argparse +import multiprocessing +import datetime +import time + +PATH = '/DATA_RM/DATA' +#PATH = "/media/jespinoza/data2/SOPHY/" + + + +# SNR ZMIN -40 A ZMAX -20 +PARAM = { + 'S': {'zmin': -70, 'zmax':-45, 'colormap': 'jet' , 'label': 'Power', 'wrname': 'power','cb_label': 'dBm', 'ch':0}, + 'SNR':{'zmin': -10, 'zmax': 15, 'colormap': 'jet' , 'label': 'SNR', 'wrname': 'snr','cb_label': 'dB', 'ch':0}, + 'V': {'zmin': -12, 'zmax': 12, 'colormap': 'sophy_v', 'label': 'Velocity', 'wrname': 'velocity', 'cb_label': 'm/s', 'ch':0}, + 'R': {'zmin': 0.5, 'zmax': 1 , 'colormap': 'sophy_r', 'label': 'RhoHV', 'wrname':'rhoHV', 'cb_label': '', 'ch':0}, + 'P': {'zmin': -180,'zmax': 180,'colormap': 'sophy_p', 'label': 'PhiDP', 'wrname':'phiDP' , 'cb_label': 'degrees', 'ch':0}, + 'D': {'zmin': -9 , 'zmax': 12, 'colormap': 'sophy_d', 'label': 'ZDR','wrname':'differential_reflectivity' , 'cb_label': 'dB','ch':0}, + 'Z': {'zmin': -20, 'zmax': 80, 'colormap': 'sophy_z', 'label': 'Reflectivity ', 'wrname':'reflectivity', 'cb_label': 'dBz','ch':0}, + 'W': {'zmin': 0 , 'zmax': 12, 'colormap': 'sophy_w', 'label': 'Spectral Width', 'wrname':'spectral_width', 'cb_label': 'm/s', 'ch':0} + } + +META = ['heightList', 'data_azi', 'data_ele', 'mode_op', 'latitude', 'longitude', 'altitude', 'heading', 'radar_name', + 'institution', 'contact', 'h0', 'range_unit', 'prf', 'prf_unit', 'variable', 'variable_unit', 'n_pulses', + 'pulse1_range', 'pulse1_width', 'pulse2_width', 'pulse1_repetitions', 'pulse2_repetitions', 'pulse_width_unit', + 'snr_threshold', 'data_noise'] + + +def max_index(r, sample_rate, ipp, h0,ipp_km): + + return int(sample_rate*ipp*1e6 * r / ipp_km) + int(sample_rate*ipp*1e6 * -h0 / ipp_km) + +def main(args): + + experiment = args.experiment + fp = open(os.path.join(PATH, experiment, 'experiment.json')) + conf = json.loads(fp.read()) + + ipp_km = conf['usrp_tx']['ipp'] + ipp = ipp_km * 2 /300000 + sample_rate = conf['usrp_rx']['sample_rate'] + speed_axis = conf['pedestal']['speed'] + if args.angles: + angles = args.angles + else: + angles = conf['pedestal']['table'] + time_offset = args.time_offset + parameters = args.parameters + start_date = conf['name'].split('@')[1].split('T')[0].replace('-', '/') + end_date = start_date + if args.start_time: + start_time = args.start_time + else: + start_time = conf['name'].split('@')[1].split('T')[1].replace('-', ':') + + if args.end_time: + end_time = args.end_time + else: + end_time = '23:59:59' + + N = int(1.0/(abs(speed_axis[0])*ipp)) # 1 GRADO DE RESOLUCION + + #path = os.path.join(PATH, experiment, 'rawdata') + path = conf['usrp_rx']['datadir'] + path_ped = os.path.join(PATH, experiment, 'position') + if args.label: + label = '-{}'.format(args.label) + else: + label = '' + path_plots = os.path.join(PATH, experiment, 'plots{}'.format(label)) + path_save = os.path.join(PATH, experiment, 'param{}'.format(label)) + RMIX = 6.0 # 4.8 #5.8 #4.8#5.68#4.8#4.8#2.64#10#2.64 + H0 = -2.0 #-1.68 #-1.68# -1.2#-1.68#-1.2#0.5#-1.2 + MASK = args.mask + + from schainpy.controller import Project + + project = Project() + project.setup(id='1', name='Sophy', description='sophy proc') + + reader = project.addReadUnit(datatype='DigitalRFReader', + path=path, + startDate=start_date, + endDate=end_date, + startTime=start_time, + endTime=end_time, + delay=30, + online=args.online, + walk=1, + ippKm = ipp_km, + getByBlock = 1, + nProfileBlocks = N, + ) + + if not conf['usrp_tx']['enable_2']: # One Pulse + n_pulses = 1 + pulse_1_width = conf['usrp_tx']['pulse_1'] + pulse_1_repetitions = conf['usrp_tx']['repetitions_1'] + pulse_2_width = 0 + pulse_2_repetitions = 0 + + voltage = project.addProcUnit(datatype='VoltageProc', inputId=reader.getId()) + + if conf['usrp_tx']['code_type_1'] != 'None': + codes = [ c.strip() for c in conf['usrp_tx']['code_1'].split(',')] + code = [] + for c in codes: + code.append([int(x) for x in c]) + op = voltage.addOperation(name='Decoder', optype='other') + op.addParameter(name='code', value=code) + op.addParameter(name='nCode', value=len(code), format='int') + op.addParameter(name='nBaud', value=len(code[0]), format='int') + + op = voltage.addOperation(name='CohInt', optype='other') #Minimo integrar 2 perfiles por ser codigo complementario + op.addParameter(name='n', value=len(code), format='int') + ncode = len(code) + else: + ncode = 1 + code = ['0'] + + op = voltage.addOperation(name='setH0') + op.addParameter(name='h0', value=H0) + + if args.range > 0: + op = voltage.addOperation(name='selectHeights') + op.addParameter(name='minIndex', value='0', format='int') + op.addParameter(name='maxIndex', value=max_index(args.range, sample_rate, ipp, H0,ipp_km), format='int') + + op = voltage.addOperation(name='PulsePair_vRF', optype='other') + op.addParameter(name='n', value=int(N)/ncode, format='int') + if args.rmDC: + op.addParameter(name='removeDC', value=1, format='int') + + proc = project.addProcUnit(datatype='ParametersProc', inputId=voltage.getId()) + proc.addParameter(name='runNextUnit', value=True) + + opObj10 = proc.addOperation(name="WeatherRadar") + opObj10.addParameter(name='tauW',value=(1e-6/sample_rate)*len(code[0])) + opObj10.addParameter(name='Pt',value=200) + + op = proc.addOperation(name='PedestalInformation') + op.addParameter(name='path', value=path_ped, format='str') + op.addParameter(name='interval', value='0.04') + op.addParameter(name='time_offset', value=time_offset) + op.addParameter(name='mode', value=args.mode) + op.addParameter(name='heading', value=conf['heading']) + + for param in parameters: + op = proc.addOperation(name='Block360') + op.addParameter(name='runNextOp', value=True) + op.addParameter(name='attr_data', value='data_param') + op.addParameter(name='angles', value=angles) + op.addParameter(name='heading', value=conf['heading']) + + + op= proc.addOperation(name='WeatherParamsPlot') + if args.save: op.addParameter(name='save', value=path_plots, format='str') + op.addParameter(name='save_period', value=-1) + op.addParameter(name='show', value=args.show) + op.addParameter(name='channels', value='0,') + op.addParameter(name='zmin', value=PARAM[param]['zmin']) + op.addParameter(name='zmax', value=PARAM[param]['zmax']) + op.addParameter(name='yrange', value=20, format='int') + op.addParameter(name='xrange', value=args.range, format='int') + op.addParameter(name='attr_data', value=param, format='str') + op.addParameter(name='labels', value=[PARAM[param]['label'], PARAM[param]['label']]) + op.addParameter(name='save_code', value=param) + op.addParameter(name='cb_label', value=PARAM[param]['cb_label']) + op.addParameter(name='colormap', value=PARAM[param]['colormap']) + op.addParameter(name='bgcolor', value='black') + op.addParameter(name='localtime', value=False) + op.addParameter(name='shapes', value='./shapes') + op.addParameter(name='latitude', value=conf['latitude'], format='float') + op.addParameter(name='longitude', value=conf['longitude'], format='float') + op.addParameter(name='map', value=True) + + if MASK: op.addParameter(name='mask', value=MASK, format='float') + if args.server: + op.addParameter(name='server', value='190.187.237.239:4444') + op.addParameter(name='exp_code', value='400') + + desc = { + 'Data': { + 'data_param': {PARAM[param]['wrname']: ['H', 'V']}, + 'utctime': 'time' + }, + 'Metadata': { + 'heightList': 'range', + 'data_azi': 'azimuth', + 'data_ele': 'elevation', + 'mode_op': 'scan_type', + 'h0': 'range_correction', + 'dataPP_NOISE': 'noise', + } + } + + if args.save: + writer = proc.addOperation(name='HDFWriter') + writer.addParameter(name='path', value=path_save, format='str') + writer.addParameter(name='Reset', value=True) + writer.addParameter(name='setType', value='weather') + writer.addParameter(name='description', value=json.dumps(desc)) + writer.addParameter(name='blocksPerFile', value='1',format='int') + writer.addParameter(name='metadataList', value=','.join(META)) + writer.addParameter(name='dataList', value='data_param,utctime') + writer.addParameter(name='weather_var', value=param) + writer.addParameter(name='mask', value=MASK, format='float') + writer.addParameter(name='localtime', value=False) + # meta + writer.addParameter(name='latitude', value='-12.040436') + writer.addParameter(name='longitude', value='-75.295893') + writer.addParameter(name='altitude', value='3379.2147') + writer.addParameter(name='heading', value='0') + writer.addParameter(name='radar_name', value='SOPHy') + writer.addParameter(name='institution', value='IGP') + writer.addParameter(name='contact', value='dscipion@igp.gob.pe') + writer.addParameter(name='created_by', value='Signal Chain (https://pypi.org/project/schainpy/)') + writer.addParameter(name='range_unit', value='km') + writer.addParameter(name='prf', value=1/ipp) + writer.addParameter(name='prf_unit', value='hertz') + writer.addParameter(name='variable', value=PARAM[param]['label']) + writer.addParameter(name='variable_unit', value=PARAM[param]['cb_label']) + writer.addParameter(name='n_pulses', value=n_pulses) + writer.addParameter(name='pulse1_range', value=RMIX) + writer.addParameter(name='pulse1_width', value=pulse_1_width) + writer.addParameter(name='pulse2_width', value=pulse_2_width) + writer.addParameter(name='pulse1_repetitions', value=pulse_1_repetitions) + writer.addParameter(name='pulse2_repetitions', value=pulse_2_repetitions) + writer.addParameter(name='pulse_width_unit', value='microseconds') + writer.addParameter(name='snr_threshold', value=MASK) + + + else: #Two pulses + n_pulses = 1 + pulse_1_width = conf['usrp_tx']['pulse_1'] + pulse_1_repetitions = conf['usrp_tx']['repetitions_1'] + pulse_2_width = conf['usrp_tx']['pulse_2'] + pulse_2_repetitions = conf['usrp_tx']['repetitions_2'] + + if '1' in args.pulses: + voltage1 = project.addProcUnit(datatype='VoltageProc', inputId=reader.getId()) + + op = voltage1.addOperation(name='ProfileSelector') + op.addParameter(name='profileRangeList', value='0,{}'.format(conf['usrp_tx']['repetitions_1']-1)) + + if conf['usrp_tx']['code_type_1'] != 'None': + codes = [ c.strip() for c in conf['usrp_tx']['code_1'].split(',')] + code = [] + for c in codes: + code.append([int(x) for x in c]) + op = voltage1.addOperation(name='Decoder', optype='other') + op.addParameter(name='code', value=code) + op.addParameter(name='nCode', value=len(code), format='int') + op.addParameter(name='nBaud', value=len(code[0]), format='int') + ncode = len(code) + else: + ncode = 1 + code = ['0'] + + op = voltage1.addOperation(name='CohInt', optype='other') #Minimo integrar 2 perfiles por ser codigo complementario + op.addParameter(name='n', value=ncode, format='int') + + op = voltage1.addOperation(name='setH0') + op.addParameter(name='h0', value=H0, format='float') + + if args.range > 0: + op = voltage1.addOperation(name='selectHeights') + op.addParameter(name='minIndex', value=max_index(0, sample_rate, ipp, H0,ipp_km), format='int') + op.addParameter(name='maxIndex', value=max_index(args.range, sample_rate, ipp, H0,ipp_km), format='int') + + + + op = voltage1.addOperation(name='PulsePair_vRF', optype='other') + op.addParameter(name='n', value=int(conf['usrp_tx']['repetitions_1'])/ncode, format='int') + if args.rmDC: + op.addParameter(name='removeDC', value=1, format='int') + + proc1 = project.addProcUnit(datatype='ParametersProc', inputId=voltage1.getId()) + proc1.addParameter(name='runNextUnit', value=True) + + opObj10 = proc1.addOperation(name="WeatherRadar") + opObj10.addParameter(name='CR_Flag',value=True) + print(1, len(code[0])) + opObj10.addParameter(name='tauW',value=(1e-6/sample_rate)*len(code[0])) + #opObj10.addParameter(name='Pt',value=((1e-6/sample_rate)*len(code[0])/ipp)*200) + opObj10.addParameter(name='Pt',value=200) + #opObj10.addParameter(name='min_index',value=0) + opObj10.addParameter(name='min_index',value=max_index(0, sample_rate, ipp, H0,ipp_km)) + #opObj10.addParameter(name='sesgoZD',value=7.73) + + + op = proc1.addOperation(name='PedestalInformation') + op.addParameter(name='path', value=path_ped, format='str') + op.addParameter(name='interval', value='0.04') + op.addParameter(name='time_offset', value=time_offset) + op.addParameter(name='mode', value=args.mode) + + op = proc1.addOperation(name='Block360') + op.addParameter(name='attr_data', value='data_param') + op.addParameter(name='runNextOp', value=True) + op.addParameter(name='angles', value=angles) + #op.addParameter(name='horario',value=False) + op.addParameter(name='heading', value=conf['heading']) + + + if '2' in args.pulses: + voltage2 = project.addProcUnit(datatype='VoltageProc', inputId=reader.getId()) + + op = voltage2.addOperation(name='ProfileSelector') + op.addParameter(name='profileRangeList', value='{},{}'.format(conf['usrp_tx']['repetitions_1'], conf['usrp_tx']['repetitions_1']+conf['usrp_tx']['repetitions_2']-1)) + + if conf['usrp_tx']['code_type_2']: + codes = [ c.strip() for c in conf['usrp_tx']['code_2'].split(',')] + code = [] + for c in codes: + code.append([int(x) for x in c]) + op = voltage2.addOperation(name='Decoder', optype='other') + op.addParameter(name='code', value=code) + op.addParameter(name='nCode', value=len(code), format='int') + op.addParameter(name='nBaud', value=len(code[0]), format='int') + + op = voltage2.addOperation(name='CohInt', optype='other') #Minimo integrar 2 perfiles por ser codigo complementario + op.addParameter(name='n', value=len(code), format='int') + + ncode = len(code) + else: + ncode = 1 + + op = voltage2.addOperation(name='setH0') + op.addParameter(name='h0', value=H0, format='float') + + if args.range > 0: + op = voltage2.addOperation(name='selectHeights') + op.addParameter(name='minIndex', value=max_index(0, sample_rate, ipp, H0,ipp_km), format='int') + op.addParameter(name='maxIndex', value=max_index(args.range, sample_rate, ipp, H0,ipp_km), format='int') + + + op = voltage2.addOperation(name='PulsePair_vRF', optype='other') + op.addParameter(name='n', value=int(conf['usrp_tx']['repetitions_2'])/ncode, format='int') + if args.rmDC: + op.addParameter(name='removeDC', value=1, format='int') + + proc2 = project.addProcUnit(datatype='ParametersProc', inputId=voltage2.getId()) + proc2.addParameter(name='runNextUnit', value=True) + + opObj10 = proc2.addOperation(name="WeatherRadar") + opObj10.addParameter(name='CR_Flag',value=True,format='bool') + print(2, len(code[0])) + opObj10.addParameter(name='tauW',value=(1e-6/sample_rate)*len(code[0])) + #opObj10.addParameter(name='Pt',value=((1e-6/sample_rate)*len(code[0])/ipp)*200) + opObj10.addParameter(name='Pt',value=200) + opObj10.addParameter(name='min_index',value=max_index(RMIX, sample_rate, ipp, H0,ipp_km)) + #opObj10.addParameter(name='sesgoZD',value=7.73) + + op = proc2.addOperation(name='PedestalInformation') + op.addParameter(name='path', value=path_ped, format='str') + op.addParameter(name='interval', value='0.04') + op.addParameter(name='time_offset', value=time_offset) + op.addParameter(name='mode', value=args.mode) + op.addParameter(name='heading', value=conf['heading']) + + op = proc2.addOperation(name='Block360') + op.addParameter(name='attr_data', value='data_param') + op.addParameter(name='runNextOp', value=True) + op.addParameter(name='angles', value=angles) + op.addParameter(name='heading', value=conf['heading']) + + #op.addParameter(name='horario',value=False) + + if '1' in args.pulses and '2' in args.pulses: + merge = project.addProcUnit(datatype='MergeProc', inputId=[proc1.getId(), proc2.getId()]) + merge.addParameter(name='attr_data', value='data_param') + merge.addParameter(name='mode', value='7') #RM + merge.addParameter(name='index', value=max_index(RMIX, sample_rate, ipp, H0,ipp_km)) + + elif '1' in args.pulses: + merge = proc1 + elif '2' in args.pulses: + merge = proc2 + + + for param in parameters: + + if args.plot: + op= merge.addOperation(name='WeatherParamsPlot') + if args.save: + op.addParameter(name='save', value=path_plots, format='str') + op.addParameter(name='save_period', value=-1) + op.addParameter(name='show', value=args.show) + #op.addParameter(name='channels', value='0,1') + op.addParameter(name='channels', value='0,') + op.addParameter(name='zmin', value=PARAM[param]['zmin'], format='int') + op.addParameter(name='zmax', value=PARAM[param]['zmax'], format='int') + op.addParameter(name='yrange', value=20, format='int') + op.addParameter(name='xrange', value=args.range, format='int') + op.addParameter(name='attr_data', value=param, format='str') + op.addParameter(name='labels', value=[[PARAM[param]['label']], [PARAM[param]['label']]]) + op.addParameter(name='save_code', value=param) + op.addParameter(name='cb_label', value=PARAM[param]['cb_label']) + op.addParameter(name='colormap', value=PARAM[param]['colormap']) + op.addParameter(name='bgcolor', value='black') + op.addParameter(name='localtime', value=False) + op.addParameter(name='shapes', value='./shapes') + op.addParameter(name='latitude', value=conf['latitude'], format='float') + op.addParameter(name='longitude', value=conf['longitude'], format='float') + op.addParameter(name='map', value=True) + + if MASK: op.addParameter(name='mask', value=MASK, format='float') + if args.server: + op.addParameter(name='server', value='190.187.237.239:4444') + op.addParameter(name='exp_code', value='400') + + desc = { + 'Data': { + 'data_param': {PARAM[param]['wrname']: ['H', 'V']}, + 'utctime': 'time' + }, + 'Metadata': { + 'heightList': 'range', + 'data_azi': 'azimuth', + 'data_ele': 'elevation', + 'mode_op': 'scan_type', + 'h0': 'range_correction', + 'dataPP_NOISE': 'noise', + } + } + + if args.save: + writer = merge.addOperation(name='HDFWriter') + writer.addParameter(name='path', value=path_save, format='str') + writer.addParameter(name='Reset', value=True) + writer.addParameter(name='setType', value='weather') + writer.addParameter(name='setChannel', value='0') #new parameter choose ch 0 H or ch 1 V + writer.addParameter(name='description', value=json.dumps(desc)) + writer.addParameter(name='blocksPerFile', value='1',format='int') + writer.addParameter(name='metadataList', value=','.join(META)) + writer.addParameter(name='dataList', value='data_param,utctime') + writer.addParameter(name='weather_var', value=param) + writer.addParameter(name='mask', value=MASK, format='float') + writer.addParameter(name='localtime', value=False) + # meta + writer.addParameter(name='latitude', value=conf['latitude']) + writer.addParameter(name='longitude', value=conf['longitude']) + writer.addParameter(name='altitude', value=conf['altitude']) + writer.addParameter(name='heading', value=conf['heading']) + writer.addParameter(name='radar_name', value='SOPHy') + writer.addParameter(name='institution', value='IGP') + writer.addParameter(name='contact', value='dscipion@igp.gob.pe') + writer.addParameter(name='created_by', value='Signal Chain (https://pypi.org/project/schainpy/)') + writer.addParameter(name='range_unit', value='km') + writer.addParameter(name='prf', value=1/ipp) + writer.addParameter(name='prf_unit', value='hertz') + writer.addParameter(name='variable', value=PARAM[param]['label']) + writer.addParameter(name='variable_unit', value=PARAM[param]['cb_label']) + writer.addParameter(name='n_pulses', value=n_pulses) + writer.addParameter(name='pulse1_range', value=RMIX) + writer.addParameter(name='pulse1_width', value=pulse_1_width) + writer.addParameter(name='pulse2_width', value=pulse_2_width) + writer.addParameter(name='pulse1_repetitions', value=pulse_1_repetitions) + writer.addParameter(name='pulse2_repetitions', value=pulse_2_repetitions) + writer.addParameter(name='pulse_width_unit', value='microseconds') + writer.addParameter(name='snr_threshold', value=MASK) + writer.addParameter(name='cr_hv', value=[67.41,67.17]) #new parameter + + return project + +if __name__ == '__main__': + + parser = argparse.ArgumentParser(description='Script to process SOPHy data.') + parser.add_argument('experiment', + help='Experiment name') + parser.add_argument('--parameters', nargs='*', default=['S'], + help='Variables to process: P, Z, V') + parser.add_argument('--pulses', nargs='*', default=['1', '2'], + help='Variables to process: 1, 2') + parser.add_argument('--angles', nargs='*', default=[], type=int, + help='Angles to process') + parser.add_argument('--time_offset', default=0, + help='Fix time offset') + parser.add_argument('--range', default=60, type=float, + help='Max range to plot') + parser.add_argument('--mask', default=0.36, type=float, + help='Filter mask over SNR') + parser.add_argument('--save', action='store_true', + help='Create output files') + parser.add_argument('--plot', action='store_true', + help='Create plot files') + parser.add_argument('--show', action='store_true', + help='Show matplotlib plot.') + parser.add_argument('--online', action='store_true', + help='Set online mode.') + parser.add_argument('--server', action='store_true', + help='Send to realtime') + parser.add_argument('--start_time', default='', + help='Set start time.') + parser.add_argument('--end_time', default='', + help='Set end time.') + parser.add_argument('--label', default='', + help='Label for plot & param folder') + parser.add_argument('--mode', default=None, + help='Type of scan') + parser.add_argument('--rmDC', action='store_true', + help='Apply remove DC.') + args = parser.parse_args() + + project = main(args) + project.start() + +#python sophy_A.py HYO_CC4_CC64_COMB@2022-12-27T00-00-32 --parameters Z --plot --save --show --rmDC --label Z_04 --range 60 --start_time "22:00:00" +# colocar siempre el range que asume 0 y no hace la seleccion de alturas +#python sophy_proc.py PIU@2023-12-19T14-15-16 --parameters Z --plot --save --rmDC --label magic10 --range 10 --start_time 14:28:00 +#python sophy_proc.py PIU@2024-01-11T23-18-32 --parameters Z --plot --save --rmDC --label magic10 --range 75