| @@ -1,965 +1,965 | |||||
| 1 |
|
1 | |||
| 2 | import os |
|
2 | import os | |
| 3 | import time |
|
3 | import time | |
| 4 | import glob |
|
4 | import glob | |
| 5 | import datetime |
|
5 | import datetime | |
| 6 | from multiprocessing import Process |
|
6 | from multiprocessing import Process | |
| 7 |
|
7 | |||
| 8 | import zmq |
|
8 | import zmq | |
| 9 | import numpy |
|
9 | import numpy | |
| 10 | import matplotlib |
|
10 | import matplotlib | |
| 11 | import matplotlib.pyplot as plt |
|
11 | import matplotlib.pyplot as plt | |
| 12 | from mpl_toolkits.axes_grid1 import make_axes_locatable |
|
12 | from mpl_toolkits.axes_grid1 import make_axes_locatable | |
| 13 | from matplotlib.ticker import FuncFormatter, LinearLocator, MultipleLocator |
|
13 | from matplotlib.ticker import FuncFormatter, LinearLocator, MultipleLocator | |
| 14 |
|
14 | |||
| 15 | from schainpy.model.proc.jroproc_base import Operation |
|
15 | from schainpy.model.proc.jroproc_base import Operation | |
| 16 | from schainpy.utils import log |
|
16 | from schainpy.utils import log | |
| 17 |
|
17 | |||
| 18 | jet_values = matplotlib.pyplot.get_cmap('jet', 100)(numpy.arange(100))[10:90] |
|
18 | jet_values = matplotlib.pyplot.get_cmap('jet', 100)(numpy.arange(100))[10:90] | |
| 19 | blu_values = matplotlib.pyplot.get_cmap( |
|
19 | blu_values = matplotlib.pyplot.get_cmap( | |
| 20 | 'seismic_r', 20)(numpy.arange(20))[10:15] |
|
20 | 'seismic_r', 20)(numpy.arange(20))[10:15] | |
| 21 | ncmap = matplotlib.colors.LinearSegmentedColormap.from_list( |
|
21 | ncmap = matplotlib.colors.LinearSegmentedColormap.from_list( | |
| 22 | 'jro', numpy.vstack((blu_values, jet_values))) |
|
22 | 'jro', numpy.vstack((blu_values, jet_values))) | |
| 23 | matplotlib.pyplot.register_cmap(cmap=ncmap) |
|
23 | matplotlib.pyplot.register_cmap(cmap=ncmap) | |
| 24 |
|
24 | |||
| 25 | CMAPS = [plt.get_cmap(s) for s in ('jro', 'jet', 'viridis', 'plasma', 'inferno', 'Greys', 'seismic', 'bwr', 'coolwarm')] |
|
25 | CMAPS = [plt.get_cmap(s) for s in ('jro', 'jet', 'viridis', 'plasma', 'inferno', 'Greys', 'seismic', 'bwr', 'coolwarm')] | |
| 26 |
|
26 | |||
| 27 |
|
27 | |||
| 28 | def figpause(interval): |
|
28 | def figpause(interval): | |
| 29 | backend = plt.rcParams['backend'] |
|
29 | backend = plt.rcParams['backend'] | |
| 30 | if backend in matplotlib.rcsetup.interactive_bk: |
|
30 | if backend in matplotlib.rcsetup.interactive_bk: | |
| 31 | figManager = matplotlib._pylab_helpers.Gcf.get_active() |
|
31 | figManager = matplotlib._pylab_helpers.Gcf.get_active() | |
| 32 | if figManager is not None: |
|
32 | if figManager is not None: | |
| 33 | canvas = figManager.canvas |
|
33 | canvas = figManager.canvas | |
| 34 | if canvas.figure.stale: |
|
34 | if canvas.figure.stale: | |
| 35 | canvas.draw() |
|
35 | canvas.draw() | |
| 36 | canvas.start_event_loop(interval) |
|
36 | canvas.start_event_loop(interval) | |
| 37 | return |
|
37 | return | |
| 38 |
|
38 | |||
| 39 |
|
39 | |||
| 40 | class PlotData(Operation, Process): |
|
40 | class PlotData(Operation, Process): | |
| 41 | ''' |
|
41 | ''' | |
| 42 | Base class for Schain plotting operations |
|
42 | Base class for Schain plotting operations | |
| 43 | ''' |
|
43 | ''' | |
| 44 |
|
44 | |||
| 45 | CODE = 'Figure' |
|
45 | CODE = 'Figure' | |
| 46 | colormap = 'jro' |
|
46 | colormap = 'jro' | |
| 47 | bgcolor = 'white' |
|
47 | bgcolor = 'white' | |
| 48 | CONFLATE = False |
|
48 | CONFLATE = False | |
| 49 | __missing = 1E30 |
|
49 | __missing = 1E30 | |
| 50 |
|
50 | |||
| 51 | __attrs__ = ['show', 'save', 'xmin', 'xmax', 'ymin', 'ymax', 'zmin', 'zmax', |
|
51 | __attrs__ = ['show', 'save', 'xmin', 'xmax', 'ymin', 'ymax', 'zmin', 'zmax', | |
| 52 | 'zlimits', 'xlabel', 'ylabel', 'xaxis','cb_label', 'title', |
|
52 | 'zlimits', 'xlabel', 'ylabel', 'xaxis','cb_label', 'title', | |
| 53 | 'colorbar', 'bgcolor', 'width', 'height', 'localtime', 'oneFigure', |
|
53 | 'colorbar', 'bgcolor', 'width', 'height', 'localtime', 'oneFigure', | |
| 54 | 'showprofile', 'decimation'] |
|
54 | 'showprofile', 'decimation'] | |
| 55 |
|
55 | |||
| 56 | def __init__(self, **kwargs): |
|
56 | def __init__(self, **kwargs): | |
| 57 |
|
57 | |||
| 58 | Operation.__init__(self, plot=True, **kwargs) |
|
58 | Operation.__init__(self, plot=True, **kwargs) | |
| 59 | Process.__init__(self) |
|
59 | Process.__init__(self) | |
| 60 |
|
60 | |||
| 61 | self.kwargs['code'] = self.CODE |
|
61 | self.kwargs['code'] = self.CODE | |
| 62 | self.mp = False |
|
62 | self.mp = False | |
| 63 | self.data = None |
|
63 | self.data = None | |
| 64 | self.isConfig = False |
|
64 | self.isConfig = False | |
| 65 | self.figures = [] |
|
65 | self.figures = [] | |
| 66 | self.axes = [] |
|
66 | self.axes = [] | |
| 67 | self.cb_axes = [] |
|
67 | self.cb_axes = [] | |
| 68 | self.localtime = kwargs.pop('localtime', True) |
|
68 | self.localtime = kwargs.pop('localtime', True) | |
| 69 | self.show = kwargs.get('show', True) |
|
69 | self.show = kwargs.get('show', True) | |
| 70 | self.save = kwargs.get('save', False) |
|
70 | self.save = kwargs.get('save', False) | |
| 71 | self.colormap = kwargs.get('colormap', self.colormap) |
|
71 | self.colormap = kwargs.get('colormap', self.colormap) | |
| 72 | self.colormap_coh = kwargs.get('colormap_coh', 'jet') |
|
72 | self.colormap_coh = kwargs.get('colormap_coh', 'jet') | |
| 73 | self.colormap_phase = kwargs.get('colormap_phase', 'RdBu_r') |
|
73 | self.colormap_phase = kwargs.get('colormap_phase', 'RdBu_r') | |
| 74 | self.colormaps = kwargs.get('colormaps', None) |
|
74 | self.colormaps = kwargs.get('colormaps', None) | |
| 75 | self.bgcolor = kwargs.get('bgcolor', self.bgcolor) |
|
75 | self.bgcolor = kwargs.get('bgcolor', self.bgcolor) | |
| 76 | self.showprofile = kwargs.get('showprofile', False) |
|
76 | self.showprofile = kwargs.get('showprofile', False) | |
| 77 | self.title = kwargs.get('wintitle', self.CODE.upper()) |
|
77 | self.title = kwargs.get('wintitle', self.CODE.upper()) | |
| 78 | self.cb_label = kwargs.get('cb_label', None) |
|
78 | self.cb_label = kwargs.get('cb_label', None) | |
| 79 | self.cb_labels = kwargs.get('cb_labels', None) |
|
79 | self.cb_labels = kwargs.get('cb_labels', None) | |
| 80 | self.xaxis = kwargs.get('xaxis', 'frequency') |
|
80 | self.xaxis = kwargs.get('xaxis', 'frequency') | |
| 81 | self.zmin = kwargs.get('zmin', None) |
|
81 | self.zmin = kwargs.get('zmin', None) | |
| 82 | self.zmax = kwargs.get('zmax', None) |
|
82 | self.zmax = kwargs.get('zmax', None) | |
| 83 | self.zlimits = kwargs.get('zlimits', None) |
|
83 | self.zlimits = kwargs.get('zlimits', None) | |
| 84 | self.xmin = kwargs.get('xmin', None) |
|
84 | self.xmin = kwargs.get('xmin', None) | |
| 85 | self.xmax = kwargs.get('xmax', None) |
|
85 | self.xmax = kwargs.get('xmax', None) | |
| 86 | self.xrange = kwargs.get('xrange', 24) |
|
86 | self.xrange = kwargs.get('xrange', 24) | |
| 87 | self.ymin = kwargs.get('ymin', None) |
|
87 | self.ymin = kwargs.get('ymin', None) | |
| 88 | self.ymax = kwargs.get('ymax', None) |
|
88 | self.ymax = kwargs.get('ymax', None) | |
| 89 | self.xlabel = kwargs.get('xlabel', None) |
|
89 | self.xlabel = kwargs.get('xlabel', None) | |
| 90 | self.decimation = kwargs.get('decimation', None) |
|
90 | self.decimation = kwargs.get('decimation', None) | |
| 91 | self.showSNR = kwargs.get('showSNR', False) |
|
91 | self.showSNR = kwargs.get('showSNR', False) | |
| 92 | self.oneFigure = kwargs.get('oneFigure', True) |
|
92 | self.oneFigure = kwargs.get('oneFigure', True) | |
| 93 | self.width = kwargs.get('width', None) |
|
93 | self.width = kwargs.get('width', None) | |
| 94 | self.height = kwargs.get('height', None) |
|
94 | self.height = kwargs.get('height', None) | |
| 95 | self.colorbar = kwargs.get('colorbar', True) |
|
95 | self.colorbar = kwargs.get('colorbar', True) | |
| 96 | self.factors = kwargs.get('factors', [1, 1, 1, 1, 1, 1, 1, 1]) |
|
96 | self.factors = kwargs.get('factors', [1, 1, 1, 1, 1, 1, 1, 1]) | |
| 97 | self.titles = kwargs.get('titles', []) |
|
97 | self.titles = kwargs.get('titles', []) | |
| 98 | self.polar = False |
|
98 | self.polar = False | |
| 99 |
|
99 | |||
| 100 | def __fmtTime(self, x, pos): |
|
100 | def __fmtTime(self, x, pos): | |
| 101 | ''' |
|
101 | ''' | |
| 102 | ''' |
|
102 | ''' | |
| 103 |
|
103 | |||
| 104 | return '{}'.format(self.getDateTime(x).strftime('%H:%M')) |
|
104 | return '{}'.format(self.getDateTime(x).strftime('%H:%M')) | |
| 105 |
|
105 | |||
| 106 | def __setup(self): |
|
106 | def __setup(self): | |
| 107 | ''' |
|
107 | ''' | |
| 108 | Common setup for all figures, here figures and axes are created |
|
108 | Common setup for all figures, here figures and axes are created | |
| 109 | ''' |
|
109 | ''' | |
| 110 |
|
110 | |||
| 111 | if self.CODE not in self.data: |
|
111 | if self.CODE not in self.data: | |
| 112 | raise ValueError(log.error('Missing data for {}'.format(self.CODE), |
|
112 | raise ValueError(log.error('Missing data for {}'.format(self.CODE), | |
| 113 | self.name)) |
|
113 | self.name)) | |
| 114 |
|
114 | |||
| 115 | self.setup() |
|
115 | self.setup() | |
| 116 |
|
116 | |||
| 117 | self.time_label = 'LT' if self.localtime else 'UTC' |
|
117 | self.time_label = 'LT' if self.localtime else 'UTC' | |
| 118 | if self.data.localtime: |
|
118 | if self.data.localtime: | |
| 119 | self.getDateTime = datetime.datetime.fromtimestamp |
|
119 | self.getDateTime = datetime.datetime.fromtimestamp | |
| 120 | else: |
|
120 | else: | |
| 121 | self.getDateTime = datetime.datetime.utcfromtimestamp |
|
121 | self.getDateTime = datetime.datetime.utcfromtimestamp | |
| 122 |
|
122 | |||
| 123 | if self.width is None: |
|
123 | if self.width is None: | |
| 124 | self.width = 8 |
|
124 | self.width = 8 | |
| 125 |
|
125 | |||
| 126 | self.figures = [] |
|
126 | self.figures = [] | |
| 127 | self.axes = [] |
|
127 | self.axes = [] | |
| 128 | self.cb_axes = [] |
|
128 | self.cb_axes = [] | |
| 129 | self.pf_axes = [] |
|
129 | self.pf_axes = [] | |
| 130 | self.cmaps = [] |
|
130 | self.cmaps = [] | |
| 131 |
|
131 | |||
| 132 | size = '15%' if self.ncols == 1 else '30%' |
|
132 | size = '15%' if self.ncols == 1 else '30%' | |
| 133 | pad = '4%' if self.ncols == 1 else '8%' |
|
133 | pad = '4%' if self.ncols == 1 else '8%' | |
| 134 |
|
134 | |||
| 135 | if self.oneFigure: |
|
135 | if self.oneFigure: | |
| 136 | if self.height is None: |
|
136 | if self.height is None: | |
| 137 | self.height = 1.4 * self.nrows + 1 |
|
137 | self.height = 1.4 * self.nrows + 1 | |
| 138 | fig = plt.figure(figsize=(self.width, self.height), |
|
138 | fig = plt.figure(figsize=(self.width, self.height), | |
| 139 | edgecolor='k', |
|
139 | edgecolor='k', | |
| 140 | facecolor='w') |
|
140 | facecolor='w') | |
| 141 | self.figures.append(fig) |
|
141 | self.figures.append(fig) | |
| 142 | for n in range(self.nplots): |
|
142 | for n in range(self.nplots): | |
| 143 | ax = fig.add_subplot(self.nrows, self.ncols, |
|
143 | ax = fig.add_subplot(self.nrows, self.ncols, | |
| 144 | n + 1, polar=self.polar) |
|
144 | n + 1, polar=self.polar) | |
| 145 | ax.tick_params(labelsize=8) |
|
145 | ax.tick_params(labelsize=8) | |
| 146 | ax.firsttime = True |
|
146 | ax.firsttime = True | |
| 147 | ax.index = 0 |
|
147 | ax.index = 0 | |
| 148 | ax.press = None |
|
148 | ax.press = None | |
| 149 | self.axes.append(ax) |
|
149 | self.axes.append(ax) | |
| 150 | if self.showprofile: |
|
150 | if self.showprofile: | |
| 151 | cax = self.__add_axes(ax, size=size, pad=pad) |
|
151 | cax = self.__add_axes(ax, size=size, pad=pad) | |
| 152 | cax.tick_params(labelsize=8) |
|
152 | cax.tick_params(labelsize=8) | |
| 153 | self.pf_axes.append(cax) |
|
153 | self.pf_axes.append(cax) | |
| 154 | else: |
|
154 | else: | |
| 155 | if self.height is None: |
|
155 | if self.height is None: | |
| 156 | self.height = 3 |
|
156 | self.height = 3 | |
| 157 | for n in range(self.nplots): |
|
157 | for n in range(self.nplots): | |
| 158 | fig = plt.figure(figsize=(self.width, self.height), |
|
158 | fig = plt.figure(figsize=(self.width, self.height), | |
| 159 | edgecolor='k', |
|
159 | edgecolor='k', | |
| 160 | facecolor='w') |
|
160 | facecolor='w') | |
| 161 | ax = fig.add_subplot(1, 1, 1, polar=self.polar) |
|
161 | ax = fig.add_subplot(1, 1, 1, polar=self.polar) | |
| 162 | ax.tick_params(labelsize=8) |
|
162 | ax.tick_params(labelsize=8) | |
| 163 | ax.firsttime = True |
|
163 | ax.firsttime = True | |
| 164 | ax.index = 0 |
|
164 | ax.index = 0 | |
| 165 | ax.press = None |
|
165 | ax.press = None | |
| 166 | self.figures.append(fig) |
|
166 | self.figures.append(fig) | |
| 167 | self.axes.append(ax) |
|
167 | self.axes.append(ax) | |
| 168 | if self.showprofile: |
|
168 | if self.showprofile: | |
| 169 | cax = self.__add_axes(ax, size=size, pad=pad) |
|
169 | cax = self.__add_axes(ax, size=size, pad=pad) | |
| 170 | cax.tick_params(labelsize=8) |
|
170 | cax.tick_params(labelsize=8) | |
| 171 | self.pf_axes.append(cax) |
|
171 | self.pf_axes.append(cax) | |
| 172 |
|
172 | |||
| 173 | for n in range(self.nrows): |
|
173 | for n in range(self.nrows): | |
| 174 | if self.colormaps is not None: |
|
174 | if self.colormaps is not None: | |
| 175 | cmap = plt.get_cmap(self.colormaps[n]) |
|
175 | cmap = plt.get_cmap(self.colormaps[n]) | |
| 176 | else: |
|
176 | else: | |
| 177 | cmap = plt.get_cmap(self.colormap) |
|
177 | cmap = plt.get_cmap(self.colormap) | |
| 178 | cmap.set_bad(self.bgcolor, 1.) |
|
178 | cmap.set_bad(self.bgcolor, 1.) | |
| 179 | self.cmaps.append(cmap) |
|
179 | self.cmaps.append(cmap) | |
| 180 |
|
180 | |||
| 181 | for fig in self.figures: |
|
181 | for fig in self.figures: | |
| 182 | fig.canvas.mpl_connect('key_press_event', self.OnKeyPress) |
|
182 | fig.canvas.mpl_connect('key_press_event', self.OnKeyPress) | |
| 183 | fig.canvas.mpl_connect('scroll_event', self.OnBtnScroll) |
|
183 | fig.canvas.mpl_connect('scroll_event', self.OnBtnScroll) | |
| 184 | fig.canvas.mpl_connect('button_press_event', self.onBtnPress) |
|
184 | fig.canvas.mpl_connect('button_press_event', self.onBtnPress) | |
| 185 | fig.canvas.mpl_connect('motion_notify_event', self.onMotion) |
|
185 | fig.canvas.mpl_connect('motion_notify_event', self.onMotion) | |
| 186 | fig.canvas.mpl_connect('button_release_event', self.onBtnRelease) |
|
186 | fig.canvas.mpl_connect('button_release_event', self.onBtnRelease) | |
| 187 | if self.show: |
|
187 | if self.show: | |
| 188 | fig.show() |
|
188 | fig.show() | |
| 189 |
|
189 | |||
| 190 | def OnKeyPress(self, event): |
|
190 | def OnKeyPress(self, event): | |
| 191 | ''' |
|
191 | ''' | |
| 192 | Event for pressing keys (up, down) change colormap |
|
192 | Event for pressing keys (up, down) change colormap | |
| 193 | ''' |
|
193 | ''' | |
| 194 | ax = event.inaxes |
|
194 | ax = event.inaxes | |
| 195 | if ax in self.axes: |
|
195 | if ax in self.axes: | |
| 196 | if event.key == 'down': |
|
196 | if event.key == 'down': | |
| 197 | ax.index += 1 |
|
197 | ax.index += 1 | |
| 198 | elif event.key == 'up': |
|
198 | elif event.key == 'up': | |
| 199 | ax.index -= 1 |
|
199 | ax.index -= 1 | |
| 200 | if ax.index < 0: |
|
200 | if ax.index < 0: | |
| 201 | ax.index = len(CMAPS) - 1 |
|
201 | ax.index = len(CMAPS) - 1 | |
| 202 | elif ax.index == len(CMAPS): |
|
202 | elif ax.index == len(CMAPS): | |
| 203 | ax.index = 0 |
|
203 | ax.index = 0 | |
| 204 | cmap = CMAPS[ax.index] |
|
204 | cmap = CMAPS[ax.index] | |
| 205 | ax.cbar.set_cmap(cmap) |
|
205 | ax.cbar.set_cmap(cmap) | |
| 206 | ax.cbar.draw_all() |
|
206 | ax.cbar.draw_all() | |
| 207 | ax.plt.set_cmap(cmap) |
|
207 | ax.plt.set_cmap(cmap) | |
| 208 | ax.cbar.patch.figure.canvas.draw() |
|
208 | ax.cbar.patch.figure.canvas.draw() | |
| 209 | self.colormap = cmap.name |
|
209 | self.colormap = cmap.name | |
| 210 |
|
210 | |||
| 211 | def OnBtnScroll(self, event): |
|
211 | def OnBtnScroll(self, event): | |
| 212 | ''' |
|
212 | ''' | |
| 213 | Event for scrolling, scale figure |
|
213 | Event for scrolling, scale figure | |
| 214 | ''' |
|
214 | ''' | |
| 215 | cb_ax = event.inaxes |
|
215 | cb_ax = event.inaxes | |
| 216 | if cb_ax in [ax.cbar.ax for ax in self.axes if ax.cbar]: |
|
216 | if cb_ax in [ax.cbar.ax for ax in self.axes if ax.cbar]: | |
| 217 | ax = [ax for ax in self.axes if cb_ax == ax.cbar.ax][0] |
|
217 | ax = [ax for ax in self.axes if cb_ax == ax.cbar.ax][0] | |
| 218 | pt = ax.cbar.ax.bbox.get_points()[:, 1] |
|
218 | pt = ax.cbar.ax.bbox.get_points()[:, 1] | |
| 219 | nrm = ax.cbar.norm |
|
219 | nrm = ax.cbar.norm | |
| 220 | vmin, vmax, p0, p1, pS = ( |
|
220 | vmin, vmax, p0, p1, pS = ( | |
| 221 | nrm.vmin, nrm.vmax, pt[0], pt[1], event.y) |
|
221 | nrm.vmin, nrm.vmax, pt[0], pt[1], event.y) | |
| 222 | scale = 2 if event.step == 1 else 0.5 |
|
222 | scale = 2 if event.step == 1 else 0.5 | |
| 223 | point = vmin + (vmax - vmin) / (p1 - p0) * (pS - p0) |
|
223 | point = vmin + (vmax - vmin) / (p1 - p0) * (pS - p0) | |
| 224 | ax.cbar.norm.vmin = point - scale * (point - vmin) |
|
224 | ax.cbar.norm.vmin = point - scale * (point - vmin) | |
| 225 | ax.cbar.norm.vmax = point - scale * (point - vmax) |
|
225 | ax.cbar.norm.vmax = point - scale * (point - vmax) | |
| 226 | ax.plt.set_norm(ax.cbar.norm) |
|
226 | ax.plt.set_norm(ax.cbar.norm) | |
| 227 | ax.cbar.draw_all() |
|
227 | ax.cbar.draw_all() | |
| 228 | ax.cbar.patch.figure.canvas.draw() |
|
228 | ax.cbar.patch.figure.canvas.draw() | |
| 229 |
|
229 | |||
| 230 | def onBtnPress(self, event): |
|
230 | def onBtnPress(self, event): | |
| 231 | ''' |
|
231 | ''' | |
| 232 | Event for mouse button press |
|
232 | Event for mouse button press | |
| 233 | ''' |
|
233 | ''' | |
| 234 | cb_ax = event.inaxes |
|
234 | cb_ax = event.inaxes | |
| 235 | if cb_ax is None: |
|
235 | if cb_ax is None: | |
| 236 | return |
|
236 | return | |
| 237 |
|
237 | |||
| 238 | if cb_ax in [ax.cbar.ax for ax in self.axes if ax.cbar]: |
|
238 | if cb_ax in [ax.cbar.ax for ax in self.axes if ax.cbar]: | |
| 239 | cb_ax.press = event.x, event.y |
|
239 | cb_ax.press = event.x, event.y | |
| 240 | else: |
|
240 | else: | |
| 241 | cb_ax.press = None |
|
241 | cb_ax.press = None | |
| 242 |
|
242 | |||
| 243 | def onMotion(self, event): |
|
243 | def onMotion(self, event): | |
| 244 | ''' |
|
244 | ''' | |
| 245 | Event for move inside colorbar |
|
245 | Event for move inside colorbar | |
| 246 | ''' |
|
246 | ''' | |
| 247 | cb_ax = event.inaxes |
|
247 | cb_ax = event.inaxes | |
| 248 | if cb_ax is None: |
|
248 | if cb_ax is None: | |
| 249 | return |
|
249 | return | |
| 250 | if cb_ax not in [ax.cbar.ax for ax in self.axes if ax.cbar]: |
|
250 | if cb_ax not in [ax.cbar.ax for ax in self.axes if ax.cbar]: | |
| 251 | return |
|
251 | return | |
| 252 | if cb_ax.press is None: |
|
252 | if cb_ax.press is None: | |
| 253 | return |
|
253 | return | |
| 254 |
|
254 | |||
| 255 | ax = [ax for ax in self.axes if cb_ax == ax.cbar.ax][0] |
|
255 | ax = [ax for ax in self.axes if cb_ax == ax.cbar.ax][0] | |
| 256 | xprev, yprev = cb_ax.press |
|
256 | xprev, yprev = cb_ax.press | |
| 257 | dx = event.x - xprev |
|
257 | dx = event.x - xprev | |
| 258 | dy = event.y - yprev |
|
258 | dy = event.y - yprev | |
| 259 | cb_ax.press = event.x, event.y |
|
259 | cb_ax.press = event.x, event.y | |
| 260 | scale = ax.cbar.norm.vmax - ax.cbar.norm.vmin |
|
260 | scale = ax.cbar.norm.vmax - ax.cbar.norm.vmin | |
| 261 | perc = 0.03 |
|
261 | perc = 0.03 | |
| 262 |
|
262 | |||
| 263 | if event.button == 1: |
|
263 | if event.button == 1: | |
| 264 | ax.cbar.norm.vmin -= (perc * scale) * numpy.sign(dy) |
|
264 | ax.cbar.norm.vmin -= (perc * scale) * numpy.sign(dy) | |
| 265 | ax.cbar.norm.vmax -= (perc * scale) * numpy.sign(dy) |
|
265 | ax.cbar.norm.vmax -= (perc * scale) * numpy.sign(dy) | |
| 266 | elif event.button == 3: |
|
266 | elif event.button == 3: | |
| 267 | ax.cbar.norm.vmin -= (perc * scale) * numpy.sign(dy) |
|
267 | ax.cbar.norm.vmin -= (perc * scale) * numpy.sign(dy) | |
| 268 | ax.cbar.norm.vmax += (perc * scale) * numpy.sign(dy) |
|
268 | ax.cbar.norm.vmax += (perc * scale) * numpy.sign(dy) | |
| 269 |
|
269 | |||
| 270 | ax.cbar.draw_all() |
|
270 | ax.cbar.draw_all() | |
| 271 | ax.plt.set_norm(ax.cbar.norm) |
|
271 | ax.plt.set_norm(ax.cbar.norm) | |
| 272 | ax.cbar.patch.figure.canvas.draw() |
|
272 | ax.cbar.patch.figure.canvas.draw() | |
| 273 |
|
273 | |||
| 274 | def onBtnRelease(self, event): |
|
274 | def onBtnRelease(self, event): | |
| 275 | ''' |
|
275 | ''' | |
| 276 | Event for mouse button release |
|
276 | Event for mouse button release | |
| 277 | ''' |
|
277 | ''' | |
| 278 | cb_ax = event.inaxes |
|
278 | cb_ax = event.inaxes | |
| 279 | if cb_ax is not None: |
|
279 | if cb_ax is not None: | |
| 280 | cb_ax.press = None |
|
280 | cb_ax.press = None | |
| 281 |
|
281 | |||
| 282 | def __add_axes(self, ax, size='30%', pad='8%'): |
|
282 | def __add_axes(self, ax, size='30%', pad='8%'): | |
| 283 | ''' |
|
283 | ''' | |
| 284 | Add new axes to the given figure |
|
284 | Add new axes to the given figure | |
| 285 | ''' |
|
285 | ''' | |
| 286 | divider = make_axes_locatable(ax) |
|
286 | divider = make_axes_locatable(ax) | |
| 287 | nax = divider.new_horizontal(size=size, pad=pad) |
|
287 | nax = divider.new_horizontal(size=size, pad=pad) | |
| 288 | ax.figure.add_axes(nax) |
|
288 | ax.figure.add_axes(nax) | |
| 289 | return nax |
|
289 | return nax | |
| 290 |
|
290 | |||
| 291 | self.setup() |
|
291 | self.setup() | |
| 292 |
|
292 | |||
| 293 | def setup(self): |
|
293 | def setup(self): | |
| 294 | ''' |
|
294 | ''' | |
| 295 | This method should be implemented in the child class, the following |
|
295 | This method should be implemented in the child class, the following | |
| 296 | attributes should be set: |
|
296 | attributes should be set: | |
| 297 |
|
297 | |||
| 298 | self.nrows: number of rows |
|
298 | self.nrows: number of rows | |
| 299 | self.ncols: number of cols |
|
299 | self.ncols: number of cols | |
| 300 | self.nplots: number of plots (channels or pairs) |
|
300 | self.nplots: number of plots (channels or pairs) | |
| 301 | self.ylabel: label for Y axes |
|
301 | self.ylabel: label for Y axes | |
| 302 | self.titles: list of axes title |
|
302 | self.titles: list of axes title | |
| 303 |
|
303 | |||
| 304 | ''' |
|
304 | ''' | |
| 305 | raise(NotImplementedError, 'Implement this method in child class') |
|
305 | raise(NotImplementedError, 'Implement this method in child class') | |
| 306 |
|
306 | |||
| 307 | def fill_gaps(self, x_buffer, y_buffer, z_buffer): |
|
307 | def fill_gaps(self, x_buffer, y_buffer, z_buffer): | |
| 308 | ''' |
|
308 | ''' | |
| 309 | Create a masked array for missing data |
|
309 | Create a masked array for missing data | |
| 310 | ''' |
|
310 | ''' | |
| 311 | if x_buffer.shape[0] < 2: |
|
311 | if x_buffer.shape[0] < 2: | |
| 312 | return x_buffer, y_buffer, z_buffer |
|
312 | return x_buffer, y_buffer, z_buffer | |
| 313 |
|
313 | |||
| 314 | deltas = x_buffer[1:] - x_buffer[0:-1] |
|
314 | deltas = x_buffer[1:] - x_buffer[0:-1] | |
| 315 | x_median = numpy.median(deltas) |
|
315 | x_median = numpy.median(deltas) | |
| 316 |
|
316 | |||
| 317 | index = numpy.where(deltas > 5 * x_median) |
|
317 | index = numpy.where(deltas > 5 * x_median) | |
| 318 |
|
318 | |||
| 319 | if len(index[0]) != 0: |
|
319 | if len(index[0]) != 0: | |
| 320 | z_buffer[::, index[0], ::] = self.__missing |
|
320 | z_buffer[::, index[0], ::] = self.__missing | |
| 321 | z_buffer = numpy.ma.masked_inside(z_buffer, |
|
321 | z_buffer = numpy.ma.masked_inside(z_buffer, | |
| 322 | 0.99 * self.__missing, |
|
322 | 0.99 * self.__missing, | |
| 323 | 1.01 * self.__missing) |
|
323 | 1.01 * self.__missing) | |
| 324 |
|
324 | |||
| 325 | return x_buffer, y_buffer, z_buffer |
|
325 | return x_buffer, y_buffer, z_buffer | |
| 326 |
|
326 | |||
| 327 | def decimate(self): |
|
327 | def decimate(self): | |
| 328 |
|
328 | |||
| 329 | # dx = int(len(self.x)/self.__MAXNUMX) + 1 |
|
329 | # dx = int(len(self.x)/self.__MAXNUMX) + 1 | |
| 330 | dy = int(len(self.y) / self.decimation) + 1 |
|
330 | dy = int(len(self.y) / self.decimation) + 1 | |
| 331 |
|
331 | |||
| 332 | # x = self.x[::dx] |
|
332 | # x = self.x[::dx] | |
| 333 | x = self.x |
|
333 | x = self.x | |
| 334 | y = self.y[::dy] |
|
334 | y = self.y[::dy] | |
| 335 | z = self.z[::, ::, ::dy] |
|
335 | z = self.z[::, ::, ::dy] | |
| 336 |
|
336 | |||
| 337 | return x, y, z |
|
337 | return x, y, z | |
| 338 |
|
338 | |||
| 339 | def format(self): |
|
339 | def format(self): | |
| 340 | ''' |
|
340 | ''' | |
| 341 | Set min and max values, labels, ticks and titles |
|
341 | Set min and max values, labels, ticks and titles | |
| 342 | ''' |
|
342 | ''' | |
| 343 |
|
343 | |||
| 344 | if self.xmin is None: |
|
344 | if self.xmin is None: | |
| 345 | xmin = self.min_time |
|
345 | xmin = self.min_time | |
| 346 | else: |
|
346 | else: | |
| 347 | if self.xaxis is 'time': |
|
347 | if self.xaxis is 'time': | |
| 348 | dt = self.getDateTime(self.min_time) |
|
348 | dt = self.getDateTime(self.min_time) | |
| 349 | xmin = (dt.replace(hour=int(self.xmin), minute=0, second=0) - |
|
349 | xmin = (dt.replace(hour=int(self.xmin), minute=0, second=0) - | |
| 350 | datetime.datetime(1970, 1, 1)).total_seconds() |
|
350 | datetime.datetime(1970, 1, 1)).total_seconds() | |
| 351 | if self.data.localtime: |
|
351 | if self.data.localtime: | |
| 352 | xmin += time.timezone |
|
352 | xmin += time.timezone | |
| 353 | else: |
|
353 | else: | |
| 354 | xmin = self.xmin |
|
354 | xmin = self.xmin | |
| 355 |
|
355 | |||
| 356 | if self.xmax is None: |
|
356 | if self.xmax is None: | |
| 357 | xmax = xmin + self.xrange * 60 * 60 |
|
357 | xmax = xmin + self.xrange * 60 * 60 | |
| 358 | else: |
|
358 | else: | |
| 359 | if self.xaxis is 'time': |
|
359 | if self.xaxis is 'time': | |
| 360 | dt = self.getDateTime(self.max_time) |
|
360 | dt = self.getDateTime(self.max_time) | |
| 361 | xmax = (dt.replace(hour=int(self.xmax), minute=59, second=59) - |
|
361 | xmax = (dt.replace(hour=int(self.xmax), minute=59, second=59) - | |
| 362 | datetime.datetime(1970, 1, 1) + datetime.timedelta(seconds=1)).total_seconds() |
|
362 | datetime.datetime(1970, 1, 1) + datetime.timedelta(seconds=1)).total_seconds() | |
| 363 | if self.data.localtime: |
|
363 | if self.data.localtime: | |
| 364 | xmax += time.timezone |
|
364 | xmax += time.timezone | |
| 365 | else: |
|
365 | else: | |
| 366 | xmax = self.xmax |
|
366 | xmax = self.xmax | |
| 367 |
|
367 | |||
| 368 | ymin = self.ymin if self.ymin else numpy.nanmin(self.y) |
|
368 | ymin = self.ymin if self.ymin else numpy.nanmin(self.y) | |
| 369 | ymax = self.ymax if self.ymax else numpy.nanmax(self.y) |
|
369 | ymax = self.ymax if self.ymax else numpy.nanmax(self.y) | |
| 370 |
|
370 | |||
| 371 | Y = numpy.array([5, 10, 20, 50, 100, 200, 500, 1000, 2000]) |
|
371 | Y = numpy.array([5, 10, 20, 50, 100, 200, 500, 1000, 2000]) | |
| 372 | i = 1 if numpy.where(ymax-ymin < Y)[0][0] < 0 else numpy.where(ymax-ymin < Y)[0][0] |
|
372 | i = 1 if numpy.where(ymax-ymin < Y)[0][0] < 0 else numpy.where(ymax-ymin < Y)[0][0] | |
| 373 | ystep = Y[i] / 5 |
|
373 | ystep = Y[i] / 5 | |
| 374 |
|
374 | |||
| 375 | for n, ax in enumerate(self.axes): |
|
375 | for n, ax in enumerate(self.axes): | |
| 376 | if ax.firsttime: |
|
376 | if ax.firsttime: | |
| 377 | ax.set_facecolor(self.bgcolor) |
|
377 | ax.set_facecolor(self.bgcolor) | |
| 378 | ax.yaxis.set_major_locator(MultipleLocator(ystep)) |
|
378 | ax.yaxis.set_major_locator(MultipleLocator(ystep)) | |
| 379 | if self.xaxis is 'time': |
|
379 | if self.xaxis is 'time': | |
| 380 | ax.xaxis.set_major_formatter(FuncFormatter(self.__fmtTime)) |
|
380 | ax.xaxis.set_major_formatter(FuncFormatter(self.__fmtTime)) | |
| 381 | ax.xaxis.set_major_locator(LinearLocator(9)) |
|
381 | ax.xaxis.set_major_locator(LinearLocator(9)) | |
| 382 | if self.xlabel is not None: |
|
382 | if self.xlabel is not None: | |
| 383 | ax.set_xlabel(self.xlabel) |
|
383 | ax.set_xlabel(self.xlabel) | |
| 384 | ax.set_ylabel(self.ylabel) |
|
384 | ax.set_ylabel(self.ylabel) | |
| 385 | ax.firsttime = False |
|
385 | ax.firsttime = False | |
| 386 | if self.showprofile: |
|
386 | if self.showprofile: | |
| 387 | self.pf_axes[n].set_ylim(ymin, ymax) |
|
387 | self.pf_axes[n].set_ylim(ymin, ymax) | |
| 388 | self.pf_axes[n].set_xlim(self.zmin, self.zmax) |
|
388 | self.pf_axes[n].set_xlim(self.zmin, self.zmax) | |
| 389 | self.pf_axes[n].set_xlabel('dB') |
|
389 | self.pf_axes[n].set_xlabel('dB') | |
| 390 | self.pf_axes[n].grid(b=True, axis='x') |
|
390 | self.pf_axes[n].grid(b=True, axis='x') | |
| 391 | [tick.set_visible(False) |
|
391 | [tick.set_visible(False) | |
| 392 | for tick in self.pf_axes[n].get_yticklabels()] |
|
392 | for tick in self.pf_axes[n].get_yticklabels()] | |
| 393 | if self.colorbar: |
|
393 | if self.colorbar: | |
| 394 | ax.cbar = plt.colorbar( |
|
394 | ax.cbar = plt.colorbar( | |
| 395 | ax.plt, ax=ax, fraction=0.05, pad=0.02, aspect=10) |
|
395 | ax.plt, ax=ax, fraction=0.05, pad=0.02, aspect=10) | |
| 396 | ax.cbar.ax.tick_params(labelsize=8) |
|
396 | ax.cbar.ax.tick_params(labelsize=8) | |
| 397 | ax.cbar.ax.press = None |
|
397 | ax.cbar.ax.press = None | |
| 398 | if self.cb_label: |
|
398 | if self.cb_label: | |
| 399 | ax.cbar.set_label(self.cb_label, size=8) |
|
399 | ax.cbar.set_label(self.cb_label, size=8) | |
| 400 | elif self.cb_labels: |
|
400 | elif self.cb_labels: | |
| 401 | ax.cbar.set_label(self.cb_labels[n], size=8) |
|
401 | ax.cbar.set_label(self.cb_labels[n], size=8) | |
| 402 | else: |
|
402 | else: | |
| 403 | ax.cbar = None |
|
403 | ax.cbar = None | |
| 404 |
|
404 | |||
| 405 | if not self.polar: |
|
405 | if not self.polar: | |
| 406 | ax.set_xlim(xmin, xmax) |
|
406 | ax.set_xlim(xmin, xmax) | |
| 407 | ax.set_ylim(ymin, ymax) |
|
407 | ax.set_ylim(ymin, ymax) | |
| 408 | ax.set_title('{} - {} {}'.format( |
|
408 | ax.set_title('{} - {} {}'.format( | |
| 409 | self.titles[n], |
|
409 | self.titles[n], | |
| 410 | self.getDateTime(self.max_time).strftime('%H:%M:%S'), |
|
410 | self.getDateTime(self.max_time).strftime('%H:%M:%S'), | |
| 411 | self.time_label), |
|
411 | self.time_label), | |
| 412 | size=8) |
|
412 | size=8) | |
| 413 | else: |
|
413 | else: | |
| 414 | ax.set_title('{}'.format(self.titles[n]), size=8) |
|
414 | ax.set_title('{}'.format(self.titles[n]), size=8) | |
| 415 | ax.set_ylim(0, 90) |
|
415 | ax.set_ylim(0, 90) | |
| 416 | ax.set_yticks(numpy.arange(0, 90, 20)) |
|
416 | ax.set_yticks(numpy.arange(0, 90, 20)) | |
| 417 | ax.yaxis.labelpad = 40 |
|
417 | ax.yaxis.labelpad = 40 | |
| 418 |
|
418 | |||
| 419 | def __plot(self): |
|
419 | def __plot(self): | |
| 420 | ''' |
|
420 | ''' | |
| 421 | ''' |
|
421 | ''' | |
| 422 | log.success('Plotting', self.name) |
|
422 | log.success('Plotting', self.name) | |
| 423 |
|
423 | |||
| 424 | try: |
|
424 | try: | |
| 425 | self.plot() |
|
425 | self.plot() | |
| 426 | self.format() |
|
426 | self.format() | |
| 427 | except: |
|
427 | except: | |
| 428 | log.warning('{} Plot could not be updated... check data'.format(self.CODE), self.name) |
|
428 | log.warning('{} Plot could not be updated... check data'.format(self.CODE), self.name) | |
| 429 |
|
429 | |||
| 430 | for n, fig in enumerate(self.figures): |
|
430 | for n, fig in enumerate(self.figures): | |
| 431 | if self.nrows == 0 or self.nplots == 0: |
|
431 | if self.nrows == 0 or self.nplots == 0: | |
| 432 | log.warning('No data', self.name) |
|
432 | log.warning('No data', self.name) | |
| 433 | fig.text(0.5, 0.5, 'No Data', fontsize='large', ha='center') |
|
433 | fig.text(0.5, 0.5, 'No Data', fontsize='large', ha='center') | |
| 434 | fig.canvas.manager.set_window_title(self.CODE) |
|
434 | fig.canvas.manager.set_window_title(self.CODE) | |
| 435 | continue |
|
435 | continue | |
| 436 |
|
436 | |||
| 437 | fig.tight_layout() |
|
437 | fig.tight_layout() | |
| 438 | fig.canvas.manager.set_window_title('{} - {}'.format(self.title, |
|
438 | fig.canvas.manager.set_window_title('{} - {}'.format(self.title, | |
| 439 | self.getDateTime(self.max_time).strftime('%Y/%m/%d'))) |
|
439 | self.getDateTime(self.max_time).strftime('%Y/%m/%d'))) | |
| 440 | fig.canvas.draw() |
|
440 | fig.canvas.draw() | |
| 441 |
|
441 | |||
| 442 | if self.save and self.data.ended: |
|
442 | if self.save and self.data.ended: | |
| 443 | channels = range(self.nrows) |
|
443 | channels = range(self.nrows) | |
| 444 | if self.oneFigure: |
|
444 | if self.oneFigure: | |
| 445 | label = '' |
|
445 | label = '' | |
| 446 | else: |
|
446 | else: | |
| 447 | label = '_{}'.format(channels[n]) |
|
447 | label = '_{}'.format(channels[n]) | |
| 448 | figname = os.path.join( |
|
448 | figname = os.path.join( | |
| 449 | self.save, |
|
449 | self.save, | |
| 450 | '{}{}_{}.png'.format( |
|
450 | '{}{}_{}.png'.format( | |
| 451 | self.CODE, |
|
451 | self.CODE, | |
| 452 | label, |
|
452 | label, | |
| 453 | self.getDateTime(self.saveTime).strftime( |
|
453 | self.getDateTime(self.saveTime).strftime( | |
| 454 |
'% |
|
454 | '%Y%m%d_%H%M%S'), | |
| 455 | ) |
|
455 | ) | |
| 456 | ) |
|
456 | ) | |
| 457 | log.log('Saving figure: {}'.format(figname), self.name) |
|
457 | log.log('Saving figure: {}'.format(figname), self.name) | |
| 458 | fig.savefig(figname) |
|
458 | fig.savefig(figname) | |
| 459 |
|
459 | |||
| 460 | def plot(self): |
|
460 | def plot(self): | |
| 461 | ''' |
|
461 | ''' | |
| 462 | ''' |
|
462 | ''' | |
| 463 | raise(NotImplementedError, 'Implement this method in child class') |
|
463 | raise(NotImplementedError, 'Implement this method in child class') | |
| 464 |
|
464 | |||
| 465 | def run(self): |
|
465 | def run(self): | |
| 466 |
|
466 | |||
| 467 | log.success('Starting', self.name) |
|
467 | log.success('Starting', self.name) | |
| 468 |
|
468 | |||
| 469 | context = zmq.Context() |
|
469 | context = zmq.Context() | |
| 470 | receiver = context.socket(zmq.SUB) |
|
470 | receiver = context.socket(zmq.SUB) | |
| 471 | receiver.setsockopt(zmq.SUBSCRIBE, '') |
|
471 | receiver.setsockopt(zmq.SUBSCRIBE, '') | |
| 472 | receiver.setsockopt(zmq.CONFLATE, self.CONFLATE) |
|
472 | receiver.setsockopt(zmq.CONFLATE, self.CONFLATE) | |
| 473 |
|
473 | |||
| 474 | if 'server' in self.kwargs['parent']: |
|
474 | if 'server' in self.kwargs['parent']: | |
| 475 | receiver.connect( |
|
475 | receiver.connect( | |
| 476 | 'ipc:///tmp/{}.plots'.format(self.kwargs['parent']['server'])) |
|
476 | 'ipc:///tmp/{}.plots'.format(self.kwargs['parent']['server'])) | |
| 477 | else: |
|
477 | else: | |
| 478 | receiver.connect("ipc:///tmp/zmq.plots") |
|
478 | receiver.connect("ipc:///tmp/zmq.plots") | |
| 479 |
|
479 | |||
| 480 | while True: |
|
480 | while True: | |
| 481 | try: |
|
481 | try: | |
| 482 | self.data = receiver.recv_pyobj(flags=zmq.NOBLOCK) |
|
482 | self.data = receiver.recv_pyobj(flags=zmq.NOBLOCK) | |
| 483 | if self.data.localtime and self.localtime: |
|
483 | if self.data.localtime and self.localtime: | |
| 484 | self.times = self.data.times |
|
484 | self.times = self.data.times | |
| 485 | elif self.data.localtime and not self.localtime: |
|
485 | elif self.data.localtime and not self.localtime: | |
| 486 | self.times = self.data.times + time.timezone |
|
486 | self.times = self.data.times + time.timezone | |
| 487 | elif not self.data.localtime and self.localtime: |
|
487 | elif not self.data.localtime and self.localtime: | |
| 488 | self.times = self.data.times - time.timezone |
|
488 | self.times = self.data.times - time.timezone | |
| 489 | else: |
|
489 | else: | |
| 490 | self.times = self.data.times |
|
490 | self.times = self.data.times | |
| 491 |
|
491 | |||
| 492 | self.min_time = self.times[0] |
|
492 | self.min_time = self.times[0] | |
| 493 | self.max_time = self.times[-1] |
|
493 | self.max_time = self.times[-1] | |
| 494 |
|
494 | |||
| 495 | if self.isConfig is False: |
|
495 | if self.isConfig is False: | |
| 496 | self.__setup() |
|
496 | self.__setup() | |
| 497 | self.isConfig = True |
|
497 | self.isConfig = True | |
| 498 |
|
498 | |||
| 499 | self.__plot() |
|
499 | self.__plot() | |
| 500 |
|
500 | |||
| 501 | except zmq.Again as e: |
|
501 | except zmq.Again as e: | |
| 502 | log.log('Waiting for data...') |
|
502 | log.log('Waiting for data...') | |
| 503 | if self.data: |
|
503 | if self.data: | |
| 504 | figpause(self.data.throttle) |
|
504 | figpause(self.data.throttle) | |
| 505 | else: |
|
505 | else: | |
| 506 | time.sleep(2) |
|
506 | time.sleep(2) | |
| 507 |
|
507 | |||
| 508 | def close(self): |
|
508 | def close(self): | |
| 509 | if self.data: |
|
509 | if self.data: | |
| 510 | self.__plot() |
|
510 | self.__plot() | |
| 511 |
|
511 | |||
| 512 |
|
512 | |||
| 513 | class PlotSpectraData(PlotData): |
|
513 | class PlotSpectraData(PlotData): | |
| 514 | ''' |
|
514 | ''' | |
| 515 | Plot for Spectra data |
|
515 | Plot for Spectra data | |
| 516 | ''' |
|
516 | ''' | |
| 517 |
|
517 | |||
| 518 | CODE = 'spc' |
|
518 | CODE = 'spc' | |
| 519 | colormap = 'jro' |
|
519 | colormap = 'jro' | |
| 520 |
|
520 | |||
| 521 | def setup(self): |
|
521 | def setup(self): | |
| 522 | self.nplots = len(self.data.channels) |
|
522 | self.nplots = len(self.data.channels) | |
| 523 | self.ncols = int(numpy.sqrt(self.nplots) + 0.9) |
|
523 | self.ncols = int(numpy.sqrt(self.nplots) + 0.9) | |
| 524 | self.nrows = int((1.0 * self.nplots / self.ncols) + 0.9) |
|
524 | self.nrows = int((1.0 * self.nplots / self.ncols) + 0.9) | |
| 525 | self.width = 3.4 * self.ncols |
|
525 | self.width = 3.4 * self.ncols | |
| 526 | self.height = 3 * self.nrows |
|
526 | self.height = 3 * self.nrows | |
| 527 | self.cb_label = 'dB' |
|
527 | self.cb_label = 'dB' | |
| 528 | if self.showprofile: |
|
528 | if self.showprofile: | |
| 529 | self.width += 0.8 * self.ncols |
|
529 | self.width += 0.8 * self.ncols | |
| 530 |
|
530 | |||
| 531 |
self.ylabel = 'Range [ |
|
531 | self.ylabel = 'Range [km]' | |
| 532 |
|
532 | |||
| 533 | def plot(self): |
|
533 | def plot(self): | |
| 534 | if self.xaxis == "frequency": |
|
534 | if self.xaxis == "frequency": | |
| 535 | x = self.data.xrange[0] |
|
535 | x = self.data.xrange[0] | |
| 536 | self.xlabel = "Frequency (kHz)" |
|
536 | self.xlabel = "Frequency (kHz)" | |
| 537 | elif self.xaxis == "time": |
|
537 | elif self.xaxis == "time": | |
| 538 | x = self.data.xrange[1] |
|
538 | x = self.data.xrange[1] | |
| 539 | self.xlabel = "Time (ms)" |
|
539 | self.xlabel = "Time (ms)" | |
| 540 | else: |
|
540 | else: | |
| 541 | x = self.data.xrange[2] |
|
541 | x = self.data.xrange[2] | |
| 542 | self.xlabel = "Velocity (m/s)" |
|
542 | self.xlabel = "Velocity (m/s)" | |
| 543 |
|
543 | |||
| 544 | if self.CODE == 'spc_mean': |
|
544 | if self.CODE == 'spc_mean': | |
| 545 | x = self.data.xrange[2] |
|
545 | x = self.data.xrange[2] | |
| 546 | self.xlabel = "Velocity (m/s)" |
|
546 | self.xlabel = "Velocity (m/s)" | |
| 547 |
|
547 | |||
| 548 | self.titles = [] |
|
548 | self.titles = [] | |
| 549 |
|
549 | |||
| 550 | y = self.data.heights |
|
550 | y = self.data.heights | |
| 551 | self.y = y |
|
551 | self.y = y | |
| 552 | z = self.data['spc'] |
|
552 | z = self.data['spc'] | |
| 553 |
|
553 | |||
| 554 | for n, ax in enumerate(self.axes): |
|
554 | for n, ax in enumerate(self.axes): | |
| 555 | noise = self.data['noise'][n][-1] |
|
555 | noise = self.data['noise'][n][-1] | |
| 556 | if self.CODE == 'spc_mean': |
|
556 | if self.CODE == 'spc_mean': | |
| 557 | mean = self.data['mean'][n][-1] |
|
557 | mean = self.data['mean'][n][-1] | |
| 558 | if ax.firsttime: |
|
558 | if ax.firsttime: | |
| 559 | self.xmax = self.xmax if self.xmax else numpy.nanmax(x) |
|
559 | self.xmax = self.xmax if self.xmax else numpy.nanmax(x) | |
| 560 | self.xmin = self.xmin if self.xmin else -self.xmax |
|
560 | self.xmin = self.xmin if self.xmin else -self.xmax | |
| 561 | self.zmin = self.zmin if self.zmin else numpy.nanmin(z) |
|
561 | self.zmin = self.zmin if self.zmin else numpy.nanmin(z) | |
| 562 | self.zmax = self.zmax if self.zmax else numpy.nanmax(z) |
|
562 | self.zmax = self.zmax if self.zmax else numpy.nanmax(z) | |
| 563 | ax.plt = ax.pcolormesh(x, y, z[n].T, |
|
563 | ax.plt = ax.pcolormesh(x, y, z[n].T, | |
| 564 | vmin=self.zmin, |
|
564 | vmin=self.zmin, | |
| 565 | vmax=self.zmax, |
|
565 | vmax=self.zmax, | |
| 566 | cmap=plt.get_cmap(self.colormap) |
|
566 | cmap=plt.get_cmap(self.colormap) | |
| 567 | ) |
|
567 | ) | |
| 568 |
|
568 | |||
| 569 | if self.showprofile: |
|
569 | if self.showprofile: | |
| 570 | ax.plt_profile = self.pf_axes[n].plot( |
|
570 | ax.plt_profile = self.pf_axes[n].plot( | |
| 571 | self.data['rti'][n][-1], y)[0] |
|
571 | self.data['rti'][n][-1], y)[0] | |
| 572 | ax.plt_noise = self.pf_axes[n].plot(numpy.repeat(noise, len(y)), y, |
|
572 | ax.plt_noise = self.pf_axes[n].plot(numpy.repeat(noise, len(y)), y, | |
| 573 | color="k", linestyle="dashed", lw=1)[0] |
|
573 | color="k", linestyle="dashed", lw=1)[0] | |
| 574 | if self.CODE == 'spc_mean': |
|
574 | if self.CODE == 'spc_mean': | |
| 575 | ax.plt_mean = ax.plot(mean, y, color='k')[0] |
|
575 | ax.plt_mean = ax.plot(mean, y, color='k')[0] | |
| 576 | else: |
|
576 | else: | |
| 577 | ax.plt.set_array(z[n].T.ravel()) |
|
577 | ax.plt.set_array(z[n].T.ravel()) | |
| 578 | if self.showprofile: |
|
578 | if self.showprofile: | |
| 579 | ax.plt_profile.set_data(self.data['rti'][n][-1], y) |
|
579 | ax.plt_profile.set_data(self.data['rti'][n][-1], y) | |
| 580 | ax.plt_noise.set_data(numpy.repeat(noise, len(y)), y) |
|
580 | ax.plt_noise.set_data(numpy.repeat(noise, len(y)), y) | |
| 581 | if self.CODE == 'spc_mean': |
|
581 | if self.CODE == 'spc_mean': | |
| 582 | ax.plt_mean.set_data(mean, y) |
|
582 | ax.plt_mean.set_data(mean, y) | |
| 583 |
|
583 | |||
| 584 | self.titles.append('CH {}: {:3.2f}dB'.format(n, noise)) |
|
584 | self.titles.append('CH {}: {:3.2f}dB'.format(n, noise)) | |
| 585 | self.saveTime = self.max_time |
|
585 | self.saveTime = self.max_time | |
| 586 |
|
586 | |||
| 587 |
|
587 | |||
| 588 | class PlotCrossSpectraData(PlotData): |
|
588 | class PlotCrossSpectraData(PlotData): | |
| 589 |
|
589 | |||
| 590 | CODE = 'cspc' |
|
590 | CODE = 'cspc' | |
| 591 | zmin_coh = None |
|
591 | zmin_coh = None | |
| 592 | zmax_coh = None |
|
592 | zmax_coh = None | |
| 593 | zmin_phase = None |
|
593 | zmin_phase = None | |
| 594 | zmax_phase = None |
|
594 | zmax_phase = None | |
| 595 |
|
595 | |||
| 596 | def setup(self): |
|
596 | def setup(self): | |
| 597 |
|
597 | |||
| 598 | self.ncols = 4 |
|
598 | self.ncols = 4 | |
| 599 | self.nrows = len(self.data.pairs) |
|
599 | self.nrows = len(self.data.pairs) | |
| 600 | self.nplots = self.nrows * 4 |
|
600 | self.nplots = self.nrows * 4 | |
| 601 | self.width = 3.4 * self.ncols |
|
601 | self.width = 3.4 * self.ncols | |
| 602 | self.height = 3 * self.nrows |
|
602 | self.height = 3 * self.nrows | |
| 603 |
self.ylabel = 'Range [ |
|
603 | self.ylabel = 'Range [km]' | |
| 604 | self.showprofile = False |
|
604 | self.showprofile = False | |
| 605 |
|
605 | |||
| 606 | def plot(self): |
|
606 | def plot(self): | |
| 607 |
|
607 | |||
| 608 | if self.xaxis == "frequency": |
|
608 | if self.xaxis == "frequency": | |
| 609 | x = self.data.xrange[0] |
|
609 | x = self.data.xrange[0] | |
| 610 | self.xlabel = "Frequency (kHz)" |
|
610 | self.xlabel = "Frequency (kHz)" | |
| 611 | elif self.xaxis == "time": |
|
611 | elif self.xaxis == "time": | |
| 612 | x = self.data.xrange[1] |
|
612 | x = self.data.xrange[1] | |
| 613 | self.xlabel = "Time (ms)" |
|
613 | self.xlabel = "Time (ms)" | |
| 614 | else: |
|
614 | else: | |
| 615 | x = self.data.xrange[2] |
|
615 | x = self.data.xrange[2] | |
| 616 | self.xlabel = "Velocity (m/s)" |
|
616 | self.xlabel = "Velocity (m/s)" | |
| 617 |
|
617 | |||
| 618 | self.titles = [] |
|
618 | self.titles = [] | |
| 619 |
|
619 | |||
| 620 | y = self.data.heights |
|
620 | y = self.data.heights | |
| 621 | self.y = y |
|
621 | self.y = y | |
| 622 | spc = self.data['spc'] |
|
622 | spc = self.data['spc'] | |
| 623 | cspc = self.data['cspc'] |
|
623 | cspc = self.data['cspc'] | |
| 624 |
|
624 | |||
| 625 | for n in range(self.nrows): |
|
625 | for n in range(self.nrows): | |
| 626 | noise = self.data['noise'][n][-1] |
|
626 | noise = self.data['noise'][n][-1] | |
| 627 | pair = self.data.pairs[n] |
|
627 | pair = self.data.pairs[n] | |
| 628 | ax = self.axes[4 * n] |
|
628 | ax = self.axes[4 * n] | |
| 629 | ax3 = self.axes[4 * n + 3] |
|
629 | ax3 = self.axes[4 * n + 3] | |
| 630 | if ax.firsttime: |
|
630 | if ax.firsttime: | |
| 631 | self.xmax = self.xmax if self.xmax else numpy.nanmax(x) |
|
631 | self.xmax = self.xmax if self.xmax else numpy.nanmax(x) | |
| 632 | self.xmin = self.xmin if self.xmin else -self.xmax |
|
632 | self.xmin = self.xmin if self.xmin else -self.xmax | |
| 633 | self.zmin = self.zmin if self.zmin else numpy.nanmin(spc) |
|
633 | self.zmin = self.zmin if self.zmin else numpy.nanmin(spc) | |
| 634 | self.zmax = self.zmax if self.zmax else numpy.nanmax(spc) |
|
634 | self.zmax = self.zmax if self.zmax else numpy.nanmax(spc) | |
| 635 | ax.plt = ax.pcolormesh(x, y, spc[pair[0]].T, |
|
635 | ax.plt = ax.pcolormesh(x, y, spc[pair[0]].T, | |
| 636 | vmin=self.zmin, |
|
636 | vmin=self.zmin, | |
| 637 | vmax=self.zmax, |
|
637 | vmax=self.zmax, | |
| 638 | cmap=plt.get_cmap(self.colormap) |
|
638 | cmap=plt.get_cmap(self.colormap) | |
| 639 | ) |
|
639 | ) | |
| 640 | else: |
|
640 | else: | |
| 641 | ax.plt.set_array(spc[pair[0]].T.ravel()) |
|
641 | ax.plt.set_array(spc[pair[0]].T.ravel()) | |
| 642 | self.titles.append('CH {}: {:3.2f}dB'.format(n, noise)) |
|
642 | self.titles.append('CH {}: {:3.2f}dB'.format(n, noise)) | |
| 643 |
|
643 | |||
| 644 | ax = self.axes[4 * n + 1] |
|
644 | ax = self.axes[4 * n + 1] | |
| 645 | if ax.firsttime: |
|
645 | if ax.firsttime: | |
| 646 | ax.plt = ax.pcolormesh(x, y, spc[pair[1]].T, |
|
646 | ax.plt = ax.pcolormesh(x, y, spc[pair[1]].T, | |
| 647 | vmin=self.zmin, |
|
647 | vmin=self.zmin, | |
| 648 | vmax=self.zmax, |
|
648 | vmax=self.zmax, | |
| 649 | cmap=plt.get_cmap(self.colormap) |
|
649 | cmap=plt.get_cmap(self.colormap) | |
| 650 | ) |
|
650 | ) | |
| 651 | else: |
|
651 | else: | |
| 652 | ax.plt.set_array(spc[pair[1]].T.ravel()) |
|
652 | ax.plt.set_array(spc[pair[1]].T.ravel()) | |
| 653 | self.titles.append('CH {}: {:3.2f}dB'.format(n, noise)) |
|
653 | self.titles.append('CH {}: {:3.2f}dB'.format(n, noise)) | |
| 654 |
|
654 | |||
| 655 | out = cspc[n] / numpy.sqrt(spc[pair[0]] * spc[pair[1]]) |
|
655 | out = cspc[n] / numpy.sqrt(spc[pair[0]] * spc[pair[1]]) | |
| 656 | coh = numpy.abs(out) |
|
656 | coh = numpy.abs(out) | |
| 657 | phase = numpy.arctan2(out.imag, out.real) * 180 / numpy.pi |
|
657 | phase = numpy.arctan2(out.imag, out.real) * 180 / numpy.pi | |
| 658 |
|
658 | |||
| 659 | ax = self.axes[4 * n + 2] |
|
659 | ax = self.axes[4 * n + 2] | |
| 660 | if ax.firsttime: |
|
660 | if ax.firsttime: | |
| 661 | ax.plt = ax.pcolormesh(x, y, coh.T, |
|
661 | ax.plt = ax.pcolormesh(x, y, coh.T, | |
| 662 | vmin=0, |
|
662 | vmin=0, | |
| 663 | vmax=1, |
|
663 | vmax=1, | |
| 664 | cmap=plt.get_cmap(self.colormap_coh) |
|
664 | cmap=plt.get_cmap(self.colormap_coh) | |
| 665 | ) |
|
665 | ) | |
| 666 | else: |
|
666 | else: | |
| 667 | ax.plt.set_array(coh.T.ravel()) |
|
667 | ax.plt.set_array(coh.T.ravel()) | |
| 668 | self.titles.append( |
|
668 | self.titles.append( | |
| 669 | 'Coherence Ch{} * Ch{}'.format(pair[0], pair[1])) |
|
669 | 'Coherence Ch{} * Ch{}'.format(pair[0], pair[1])) | |
| 670 |
|
670 | |||
| 671 | ax = self.axes[4 * n + 3] |
|
671 | ax = self.axes[4 * n + 3] | |
| 672 | if ax.firsttime: |
|
672 | if ax.firsttime: | |
| 673 | ax.plt = ax.pcolormesh(x, y, phase.T, |
|
673 | ax.plt = ax.pcolormesh(x, y, phase.T, | |
| 674 | vmin=-180, |
|
674 | vmin=-180, | |
| 675 | vmax=180, |
|
675 | vmax=180, | |
| 676 | cmap=plt.get_cmap(self.colormap_phase) |
|
676 | cmap=plt.get_cmap(self.colormap_phase) | |
| 677 | ) |
|
677 | ) | |
| 678 | else: |
|
678 | else: | |
| 679 | ax.plt.set_array(phase.T.ravel()) |
|
679 | ax.plt.set_array(phase.T.ravel()) | |
| 680 | self.titles.append('Phase CH{} * CH{}'.format(pair[0], pair[1])) |
|
680 | self.titles.append('Phase CH{} * CH{}'.format(pair[0], pair[1])) | |
| 681 |
|
681 | |||
| 682 | self.saveTime = self.max_time |
|
682 | self.saveTime = self.max_time | |
| 683 |
|
683 | |||
| 684 |
|
684 | |||
| 685 | class PlotSpectraMeanData(PlotSpectraData): |
|
685 | class PlotSpectraMeanData(PlotSpectraData): | |
| 686 | ''' |
|
686 | ''' | |
| 687 | Plot for Spectra and Mean |
|
687 | Plot for Spectra and Mean | |
| 688 | ''' |
|
688 | ''' | |
| 689 | CODE = 'spc_mean' |
|
689 | CODE = 'spc_mean' | |
| 690 | colormap = 'jro' |
|
690 | colormap = 'jro' | |
| 691 |
|
691 | |||
| 692 |
|
692 | |||
| 693 | class PlotRTIData(PlotData): |
|
693 | class PlotRTIData(PlotData): | |
| 694 | ''' |
|
694 | ''' | |
| 695 | Plot for RTI data |
|
695 | Plot for RTI data | |
| 696 | ''' |
|
696 | ''' | |
| 697 |
|
697 | |||
| 698 | CODE = 'rti' |
|
698 | CODE = 'rti' | |
| 699 | colormap = 'jro' |
|
699 | colormap = 'jro' | |
| 700 |
|
700 | |||
| 701 | def setup(self): |
|
701 | def setup(self): | |
| 702 | self.xaxis = 'time' |
|
702 | self.xaxis = 'time' | |
| 703 | self.ncols = 1 |
|
703 | self.ncols = 1 | |
| 704 | self.nrows = len(self.data.channels) |
|
704 | self.nrows = len(self.data.channels) | |
| 705 | self.nplots = len(self.data.channels) |
|
705 | self.nplots = len(self.data.channels) | |
| 706 |
self.ylabel = 'Range [ |
|
706 | self.ylabel = 'Range [km]' | |
| 707 | self.cb_label = 'dB' |
|
707 | self.cb_label = 'dB' | |
| 708 | self.titles = ['{} Channel {}'.format( |
|
708 | self.titles = ['{} Channel {}'.format( | |
| 709 | self.CODE.upper(), x) for x in range(self.nrows)] |
|
709 | self.CODE.upper(), x) for x in range(self.nrows)] | |
| 710 |
|
710 | |||
| 711 | def plot(self): |
|
711 | def plot(self): | |
| 712 | self.x = self.times |
|
712 | self.x = self.times | |
| 713 | self.y = self.data.heights |
|
713 | self.y = self.data.heights | |
| 714 | self.z = self.data[self.CODE] |
|
714 | self.z = self.data[self.CODE] | |
| 715 | self.z = numpy.ma.masked_invalid(self.z) |
|
715 | self.z = numpy.ma.masked_invalid(self.z) | |
| 716 |
|
716 | |||
| 717 | if self.decimation is None: |
|
717 | if self.decimation is None: | |
| 718 | x, y, z = self.fill_gaps(self.x, self.y, self.z) |
|
718 | x, y, z = self.fill_gaps(self.x, self.y, self.z) | |
| 719 | else: |
|
719 | else: | |
| 720 | x, y, z = self.fill_gaps(*self.decimate()) |
|
720 | x, y, z = self.fill_gaps(*self.decimate()) | |
| 721 |
|
721 | |||
| 722 | for n, ax in enumerate(self.axes): |
|
722 | for n, ax in enumerate(self.axes): | |
| 723 | self.zmin = self.zmin if self.zmin else numpy.min(self.z) |
|
723 | self.zmin = self.zmin if self.zmin else numpy.min(self.z) | |
| 724 | self.zmax = self.zmax if self.zmax else numpy.max(self.z) |
|
724 | self.zmax = self.zmax if self.zmax else numpy.max(self.z) | |
| 725 | if ax.firsttime: |
|
725 | if ax.firsttime: | |
| 726 | ax.plt = ax.pcolormesh(x, y, z[n].T, |
|
726 | ax.plt = ax.pcolormesh(x, y, z[n].T, | |
| 727 | vmin=self.zmin, |
|
727 | vmin=self.zmin, | |
| 728 | vmax=self.zmax, |
|
728 | vmax=self.zmax, | |
| 729 | cmap=plt.get_cmap(self.colormap) |
|
729 | cmap=plt.get_cmap(self.colormap) | |
| 730 | ) |
|
730 | ) | |
| 731 | if self.showprofile: |
|
731 | if self.showprofile: | |
| 732 | ax.plot_profile = self.pf_axes[n].plot( |
|
732 | ax.plot_profile = self.pf_axes[n].plot( | |
| 733 | self.data['rti'][n][-1], self.y)[0] |
|
733 | self.data['rti'][n][-1], self.y)[0] | |
| 734 | ax.plot_noise = self.pf_axes[n].plot(numpy.repeat(self.data['noise'][n][-1], len(self.y)), self.y, |
|
734 | ax.plot_noise = self.pf_axes[n].plot(numpy.repeat(self.data['noise'][n][-1], len(self.y)), self.y, | |
| 735 | color="k", linestyle="dashed", lw=1)[0] |
|
735 | color="k", linestyle="dashed", lw=1)[0] | |
| 736 | else: |
|
736 | else: | |
| 737 | ax.collections.remove(ax.collections[0]) |
|
737 | ax.collections.remove(ax.collections[0]) | |
| 738 | ax.plt = ax.pcolormesh(x, y, z[n].T, |
|
738 | ax.plt = ax.pcolormesh(x, y, z[n].T, | |
| 739 | vmin=self.zmin, |
|
739 | vmin=self.zmin, | |
| 740 | vmax=self.zmax, |
|
740 | vmax=self.zmax, | |
| 741 | cmap=plt.get_cmap(self.colormap) |
|
741 | cmap=plt.get_cmap(self.colormap) | |
| 742 | ) |
|
742 | ) | |
| 743 | if self.showprofile: |
|
743 | if self.showprofile: | |
| 744 | ax.plot_profile.set_data(self.data['rti'][n][-1], self.y) |
|
744 | ax.plot_profile.set_data(self.data['rti'][n][-1], self.y) | |
| 745 | ax.plot_noise.set_data(numpy.repeat( |
|
745 | ax.plot_noise.set_data(numpy.repeat( | |
| 746 | self.data['noise'][n][-1], len(self.y)), self.y) |
|
746 | self.data['noise'][n][-1], len(self.y)), self.y) | |
| 747 |
|
747 | |||
| 748 | self.saveTime = self.min_time |
|
748 | self.saveTime = self.min_time | |
| 749 |
|
749 | |||
| 750 |
|
750 | |||
| 751 | class PlotCOHData(PlotRTIData): |
|
751 | class PlotCOHData(PlotRTIData): | |
| 752 | ''' |
|
752 | ''' | |
| 753 | Plot for Coherence data |
|
753 | Plot for Coherence data | |
| 754 | ''' |
|
754 | ''' | |
| 755 |
|
755 | |||
| 756 | CODE = 'coh' |
|
756 | CODE = 'coh' | |
| 757 |
|
757 | |||
| 758 | def setup(self): |
|
758 | def setup(self): | |
| 759 | self.xaxis = 'time' |
|
759 | self.xaxis = 'time' | |
| 760 | self.ncols = 1 |
|
760 | self.ncols = 1 | |
| 761 | self.nrows = len(self.data.pairs) |
|
761 | self.nrows = len(self.data.pairs) | |
| 762 | self.nplots = len(self.data.pairs) |
|
762 | self.nplots = len(self.data.pairs) | |
| 763 |
self.ylabel = 'Range [ |
|
763 | self.ylabel = 'Range [km]' | |
| 764 | if self.CODE == 'coh': |
|
764 | if self.CODE == 'coh': | |
| 765 | self.cb_label = '' |
|
765 | self.cb_label = '' | |
| 766 | self.titles = [ |
|
766 | self.titles = [ | |
| 767 | 'Coherence Map Ch{} * Ch{}'.format(x[0], x[1]) for x in self.data.pairs] |
|
767 | 'Coherence Map Ch{} * Ch{}'.format(x[0], x[1]) for x in self.data.pairs] | |
| 768 | else: |
|
768 | else: | |
| 769 | self.cb_label = 'Degrees' |
|
769 | self.cb_label = 'Degrees' | |
| 770 | self.titles = [ |
|
770 | self.titles = [ | |
| 771 | 'Phase Map Ch{} * Ch{}'.format(x[0], x[1]) for x in self.data.pairs] |
|
771 | 'Phase Map Ch{} * Ch{}'.format(x[0], x[1]) for x in self.data.pairs] | |
| 772 |
|
772 | |||
| 773 |
|
773 | |||
| 774 | class PlotPHASEData(PlotCOHData): |
|
774 | class PlotPHASEData(PlotCOHData): | |
| 775 | ''' |
|
775 | ''' | |
| 776 | Plot for Phase map data |
|
776 | Plot for Phase map data | |
| 777 | ''' |
|
777 | ''' | |
| 778 |
|
778 | |||
| 779 | CODE = 'phase' |
|
779 | CODE = 'phase' | |
| 780 | colormap = 'seismic' |
|
780 | colormap = 'seismic' | |
| 781 |
|
781 | |||
| 782 |
|
782 | |||
| 783 | class PlotNoiseData(PlotData): |
|
783 | class PlotNoiseData(PlotData): | |
| 784 | ''' |
|
784 | ''' | |
| 785 | Plot for noise |
|
785 | Plot for noise | |
| 786 | ''' |
|
786 | ''' | |
| 787 |
|
787 | |||
| 788 | CODE = 'noise' |
|
788 | CODE = 'noise' | |
| 789 |
|
789 | |||
| 790 | def setup(self): |
|
790 | def setup(self): | |
| 791 | self.xaxis = 'time' |
|
791 | self.xaxis = 'time' | |
| 792 | self.ncols = 1 |
|
792 | self.ncols = 1 | |
| 793 | self.nrows = 1 |
|
793 | self.nrows = 1 | |
| 794 | self.nplots = 1 |
|
794 | self.nplots = 1 | |
| 795 | self.ylabel = 'Intensity [dB]' |
|
795 | self.ylabel = 'Intensity [dB]' | |
| 796 | self.titles = ['Noise'] |
|
796 | self.titles = ['Noise'] | |
| 797 | self.colorbar = False |
|
797 | self.colorbar = False | |
| 798 |
|
798 | |||
| 799 | def plot(self): |
|
799 | def plot(self): | |
| 800 |
|
800 | |||
| 801 | x = self.times |
|
801 | x = self.times | |
| 802 | xmin = self.min_time |
|
802 | xmin = self.min_time | |
| 803 | xmax = xmin + self.xrange * 60 * 60 |
|
803 | xmax = xmin + self.xrange * 60 * 60 | |
| 804 | Y = self.data[self.CODE] |
|
804 | Y = self.data[self.CODE] | |
| 805 |
|
805 | |||
| 806 | if self.axes[0].firsttime: |
|
806 | if self.axes[0].firsttime: | |
| 807 | for ch in self.data.channels: |
|
807 | for ch in self.data.channels: | |
| 808 | y = Y[ch] |
|
808 | y = Y[ch] | |
| 809 | self.axes[0].plot(x, y, lw=1, label='Ch{}'.format(ch)) |
|
809 | self.axes[0].plot(x, y, lw=1, label='Ch{}'.format(ch)) | |
| 810 | plt.legend() |
|
810 | plt.legend() | |
| 811 | else: |
|
811 | else: | |
| 812 | for ch in self.data.channels: |
|
812 | for ch in self.data.channels: | |
| 813 | y = Y[ch] |
|
813 | y = Y[ch] | |
| 814 | self.axes[0].lines[ch].set_data(x, y) |
|
814 | self.axes[0].lines[ch].set_data(x, y) | |
| 815 |
|
815 | |||
| 816 | self.ymin = numpy.nanmin(Y) - 5 |
|
816 | self.ymin = numpy.nanmin(Y) - 5 | |
| 817 | self.ymax = numpy.nanmax(Y) + 5 |
|
817 | self.ymax = numpy.nanmax(Y) + 5 | |
| 818 | self.saveTime = self.min_time |
|
818 | self.saveTime = self.min_time | |
| 819 |
|
819 | |||
| 820 |
|
820 | |||
| 821 | class PlotSNRData(PlotRTIData): |
|
821 | class PlotSNRData(PlotRTIData): | |
| 822 | ''' |
|
822 | ''' | |
| 823 | Plot for SNR Data |
|
823 | Plot for SNR Data | |
| 824 | ''' |
|
824 | ''' | |
| 825 |
|
825 | |||
| 826 | CODE = 'snr' |
|
826 | CODE = 'snr' | |
| 827 | colormap = 'jet' |
|
827 | colormap = 'jet' | |
| 828 |
|
828 | |||
| 829 |
|
829 | |||
| 830 | class PlotDOPData(PlotRTIData): |
|
830 | class PlotDOPData(PlotRTIData): | |
| 831 | ''' |
|
831 | ''' | |
| 832 | Plot for DOPPLER Data |
|
832 | Plot for DOPPLER Data | |
| 833 | ''' |
|
833 | ''' | |
| 834 |
|
834 | |||
| 835 | CODE = 'dop' |
|
835 | CODE = 'dop' | |
| 836 | colormap = 'jet' |
|
836 | colormap = 'jet' | |
| 837 |
|
837 | |||
| 838 |
|
838 | |||
| 839 | class PlotSkyMapData(PlotData): |
|
839 | class PlotSkyMapData(PlotData): | |
| 840 | ''' |
|
840 | ''' | |
| 841 | Plot for meteors detection data |
|
841 | Plot for meteors detection data | |
| 842 | ''' |
|
842 | ''' | |
| 843 |
|
843 | |||
| 844 | CODE = 'param' |
|
844 | CODE = 'param' | |
| 845 |
|
845 | |||
| 846 | def setup(self): |
|
846 | def setup(self): | |
| 847 |
|
847 | |||
| 848 | self.ncols = 1 |
|
848 | self.ncols = 1 | |
| 849 | self.nrows = 1 |
|
849 | self.nrows = 1 | |
| 850 | self.width = 7.2 |
|
850 | self.width = 7.2 | |
| 851 | self.height = 7.2 |
|
851 | self.height = 7.2 | |
| 852 | self.nplots = 1 |
|
852 | self.nplots = 1 | |
| 853 | self.xlabel = 'Zonal Zenith Angle (deg)' |
|
853 | self.xlabel = 'Zonal Zenith Angle (deg)' | |
| 854 | self.ylabel = 'Meridional Zenith Angle (deg)' |
|
854 | self.ylabel = 'Meridional Zenith Angle (deg)' | |
| 855 | self.polar = True |
|
855 | self.polar = True | |
| 856 | self.ymin = -180 |
|
856 | self.ymin = -180 | |
| 857 | self.ymax = 180 |
|
857 | self.ymax = 180 | |
| 858 | self.colorbar = False |
|
858 | self.colorbar = False | |
| 859 |
|
859 | |||
| 860 | def plot(self): |
|
860 | def plot(self): | |
| 861 |
|
861 | |||
| 862 | arrayParameters = numpy.concatenate(self.data['param']) |
|
862 | arrayParameters = numpy.concatenate(self.data['param']) | |
| 863 | error = arrayParameters[:, -1] |
|
863 | error = arrayParameters[:, -1] | |
| 864 | indValid = numpy.where(error == 0)[0] |
|
864 | indValid = numpy.where(error == 0)[0] | |
| 865 | finalMeteor = arrayParameters[indValid, :] |
|
865 | finalMeteor = arrayParameters[indValid, :] | |
| 866 | finalAzimuth = finalMeteor[:, 3] |
|
866 | finalAzimuth = finalMeteor[:, 3] | |
| 867 | finalZenith = finalMeteor[:, 4] |
|
867 | finalZenith = finalMeteor[:, 4] | |
| 868 |
|
868 | |||
| 869 | x = finalAzimuth * numpy.pi / 180 |
|
869 | x = finalAzimuth * numpy.pi / 180 | |
| 870 | y = finalZenith |
|
870 | y = finalZenith | |
| 871 |
|
871 | |||
| 872 | ax = self.axes[0] |
|
872 | ax = self.axes[0] | |
| 873 |
|
873 | |||
| 874 | if ax.firsttime: |
|
874 | if ax.firsttime: | |
| 875 | ax.plot = ax.plot(x, y, 'bo', markersize=5)[0] |
|
875 | ax.plot = ax.plot(x, y, 'bo', markersize=5)[0] | |
| 876 | else: |
|
876 | else: | |
| 877 | ax.plot.set_data(x, y) |
|
877 | ax.plot.set_data(x, y) | |
| 878 |
|
878 | |||
| 879 | dt1 = self.getDateTime(self.min_time).strftime('%y/%m/%d %H:%M:%S') |
|
879 | dt1 = self.getDateTime(self.min_time).strftime('%y/%m/%d %H:%M:%S') | |
| 880 | dt2 = self.getDateTime(self.max_time).strftime('%y/%m/%d %H:%M:%S') |
|
880 | dt2 = self.getDateTime(self.max_time).strftime('%y/%m/%d %H:%M:%S') | |
| 881 | title = 'Meteor Detection Sky Map\n %s - %s \n Number of events: %5.0f\n' % (dt1, |
|
881 | title = 'Meteor Detection Sky Map\n %s - %s \n Number of events: %5.0f\n' % (dt1, | |
| 882 | dt2, |
|
882 | dt2, | |
| 883 | len(x)) |
|
883 | len(x)) | |
| 884 | self.titles[0] = title |
|
884 | self.titles[0] = title | |
| 885 | self.saveTime = self.max_time |
|
885 | self.saveTime = self.max_time | |
| 886 |
|
886 | |||
| 887 |
|
887 | |||
| 888 | class PlotParamData(PlotRTIData): |
|
888 | class PlotParamData(PlotRTIData): | |
| 889 | ''' |
|
889 | ''' | |
| 890 | Plot for data_param object |
|
890 | Plot for data_param object | |
| 891 | ''' |
|
891 | ''' | |
| 892 |
|
892 | |||
| 893 | CODE = 'param' |
|
893 | CODE = 'param' | |
| 894 | colormap = 'seismic' |
|
894 | colormap = 'seismic' | |
| 895 |
|
895 | |||
| 896 | def setup(self): |
|
896 | def setup(self): | |
| 897 | self.xaxis = 'time' |
|
897 | self.xaxis = 'time' | |
| 898 | self.ncols = 1 |
|
898 | self.ncols = 1 | |
| 899 | self.nrows = self.data.shape(self.CODE)[0] |
|
899 | self.nrows = self.data.shape(self.CODE)[0] | |
| 900 | self.nplots = self.nrows |
|
900 | self.nplots = self.nrows | |
| 901 | if self.showSNR: |
|
901 | if self.showSNR: | |
| 902 | self.nrows += 1 |
|
902 | self.nrows += 1 | |
| 903 | self.nplots += 1 |
|
903 | self.nplots += 1 | |
| 904 |
|
904 | |||
| 905 |
self.ylabel = 'Height [ |
|
905 | self.ylabel = 'Height [km]' | |
| 906 | if not self.titles: |
|
906 | if not self.titles: | |
| 907 | self.titles = self.data.parameters \ |
|
907 | self.titles = self.data.parameters \ | |
| 908 | if self.data.parameters else ['Param {}'.format(x) for x in xrange(self.nrows)] |
|
908 | if self.data.parameters else ['Param {}'.format(x) for x in xrange(self.nrows)] | |
| 909 | if self.showSNR: |
|
909 | if self.showSNR: | |
| 910 | self.titles.append('SNR') |
|
910 | self.titles.append('SNR') | |
| 911 |
|
911 | |||
| 912 | def plot(self): |
|
912 | def plot(self): | |
| 913 | self.data.normalize_heights() |
|
913 | self.data.normalize_heights() | |
| 914 | self.x = self.times |
|
914 | self.x = self.times | |
| 915 | self.y = self.data.heights |
|
915 | self.y = self.data.heights | |
| 916 | if self.showSNR: |
|
916 | if self.showSNR: | |
| 917 | self.z = numpy.concatenate( |
|
917 | self.z = numpy.concatenate( | |
| 918 | (self.data[self.CODE], self.data['snr']) |
|
918 | (self.data[self.CODE], self.data['snr']) | |
| 919 | ) |
|
919 | ) | |
| 920 | else: |
|
920 | else: | |
| 921 | self.z = self.data[self.CODE] |
|
921 | self.z = self.data[self.CODE] | |
| 922 |
|
922 | |||
| 923 | self.z = numpy.ma.masked_invalid(self.z) |
|
923 | self.z = numpy.ma.masked_invalid(self.z) | |
| 924 |
|
924 | |||
| 925 | if self.decimation is None: |
|
925 | if self.decimation is None: | |
| 926 | x, y, z = self.fill_gaps(self.x, self.y, self.z) |
|
926 | x, y, z = self.fill_gaps(self.x, self.y, self.z) | |
| 927 | else: |
|
927 | else: | |
| 928 | x, y, z = self.fill_gaps(*self.decimate()) |
|
928 | x, y, z = self.fill_gaps(*self.decimate()) | |
| 929 |
|
929 | |||
| 930 | for n, ax in enumerate(self.axes): |
|
930 | for n, ax in enumerate(self.axes): | |
| 931 |
|
931 | |||
| 932 | self.zmax = self.zmax if self.zmax is not None else numpy.max( |
|
932 | self.zmax = self.zmax if self.zmax is not None else numpy.max( | |
| 933 | self.z[n]) |
|
933 | self.z[n]) | |
| 934 | self.zmin = self.zmin if self.zmin is not None else numpy.min( |
|
934 | self.zmin = self.zmin if self.zmin is not None else numpy.min( | |
| 935 | self.z[n]) |
|
935 | self.z[n]) | |
| 936 |
|
936 | |||
| 937 | if ax.firsttime: |
|
937 | if ax.firsttime: | |
| 938 | if self.zlimits is not None: |
|
938 | if self.zlimits is not None: | |
| 939 | self.zmin, self.zmax = self.zlimits[n] |
|
939 | self.zmin, self.zmax = self.zlimits[n] | |
| 940 |
|
940 | |||
| 941 | ax.plt = ax.pcolormesh(x, y, z[n].T * self.factors[n], |
|
941 | ax.plt = ax.pcolormesh(x, y, z[n].T * self.factors[n], | |
| 942 | vmin=self.zmin, |
|
942 | vmin=self.zmin, | |
| 943 | vmax=self.zmax, |
|
943 | vmax=self.zmax, | |
| 944 | cmap=self.cmaps[n] |
|
944 | cmap=self.cmaps[n] | |
| 945 | ) |
|
945 | ) | |
| 946 | else: |
|
946 | else: | |
| 947 | if self.zlimits is not None: |
|
947 | if self.zlimits is not None: | |
| 948 | self.zmin, self.zmax = self.zlimits[n] |
|
948 | self.zmin, self.zmax = self.zlimits[n] | |
| 949 | ax.collections.remove(ax.collections[0]) |
|
949 | ax.collections.remove(ax.collections[0]) | |
| 950 | ax.plt = ax.pcolormesh(x, y, z[n].T * self.factors[n], |
|
950 | ax.plt = ax.pcolormesh(x, y, z[n].T * self.factors[n], | |
| 951 | vmin=self.zmin, |
|
951 | vmin=self.zmin, | |
| 952 | vmax=self.zmax, |
|
952 | vmax=self.zmax, | |
| 953 | cmap=self.cmaps[n] |
|
953 | cmap=self.cmaps[n] | |
| 954 | ) |
|
954 | ) | |
| 955 |
|
955 | |||
| 956 | self.saveTime = self.min_time |
|
956 | self.saveTime = self.min_time | |
| 957 |
|
957 | |||
| 958 |
|
958 | |||
| 959 | class PlotOutputData(PlotParamData): |
|
959 | class PlotOutputData(PlotParamData): | |
| 960 | ''' |
|
960 | ''' | |
| 961 | Plot data_output object |
|
961 | Plot data_output object | |
| 962 | ''' |
|
962 | ''' | |
| 963 |
|
963 | |||
| 964 | CODE = 'output' |
|
964 | CODE = 'output' | |
| 965 | colormap = 'seismic' |
|
965 | colormap = 'seismic' | |
| @@ -1,627 +1,631 | |||||
| 1 | ''' |
|
1 | ''' | |
| 2 | @author: Juan C. Espinoza |
|
2 | @author: Juan C. Espinoza | |
| 3 | ''' |
|
3 | ''' | |
| 4 |
|
4 | |||
| 5 | import time |
|
5 | import time | |
| 6 | import json |
|
6 | import json | |
| 7 | import numpy |
|
7 | import numpy | |
| 8 | import paho.mqtt.client as mqtt |
|
8 | import paho.mqtt.client as mqtt | |
| 9 | import zmq |
|
9 | import zmq | |
| 10 | import datetime |
|
10 | import datetime | |
| 11 | from zmq.utils.monitor import recv_monitor_message |
|
11 | from zmq.utils.monitor import recv_monitor_message | |
| 12 | from functools import wraps |
|
12 | from functools import wraps | |
| 13 | from threading import Thread |
|
13 | from threading import Thread | |
| 14 | from multiprocessing import Process |
|
14 | from multiprocessing import Process | |
| 15 |
|
15 | |||
| 16 | from schainpy.model.proc.jroproc_base import Operation, ProcessingUnit |
|
16 | from schainpy.model.proc.jroproc_base import Operation, ProcessingUnit | |
| 17 | from schainpy.model.data.jrodata import JROData |
|
17 | from schainpy.model.data.jrodata import JROData | |
| 18 | from schainpy.utils import log |
|
18 | from schainpy.utils import log | |
| 19 |
|
19 | |||
| 20 | MAXNUMX = 100 |
|
20 | MAXNUMX = 100 | |
| 21 | MAXNUMY = 100 |
|
21 | MAXNUMY = 100 | |
| 22 |
|
22 | |||
| 23 | class PrettyFloat(float): |
|
23 | class PrettyFloat(float): | |
| 24 | def __repr__(self): |
|
24 | def __repr__(self): | |
| 25 | return '%.2f' % self |
|
25 | return '%.2f' % self | |
| 26 |
|
26 | |||
| 27 | def roundFloats(obj): |
|
27 | def roundFloats(obj): | |
| 28 | if isinstance(obj, list): |
|
28 | if isinstance(obj, list): | |
| 29 | return map(roundFloats, obj) |
|
29 | return map(roundFloats, obj) | |
| 30 | elif isinstance(obj, float): |
|
30 | elif isinstance(obj, float): | |
| 31 | return round(obj, 2) |
|
31 | return round(obj, 2) | |
| 32 |
|
32 | |||
| 33 | def decimate(z, MAXNUMY): |
|
33 | def decimate(z, MAXNUMY): | |
| 34 | dy = int(len(z[0])/MAXNUMY) + 1 |
|
34 | dy = int(len(z[0])/MAXNUMY) + 1 | |
| 35 |
|
35 | |||
| 36 | return z[::, ::dy] |
|
36 | return z[::, ::dy] | |
| 37 |
|
37 | |||
| 38 | class throttle(object): |
|
38 | class throttle(object): | |
| 39 | ''' |
|
39 | ''' | |
| 40 | Decorator that prevents a function from being called more than once every |
|
40 | Decorator that prevents a function from being called more than once every | |
| 41 | time period. |
|
41 | time period. | |
| 42 | To create a function that cannot be called more than once a minute, but |
|
42 | To create a function that cannot be called more than once a minute, but | |
| 43 | will sleep until it can be called: |
|
43 | will sleep until it can be called: | |
| 44 | @throttle(minutes=1) |
|
44 | @throttle(minutes=1) | |
| 45 | def foo(): |
|
45 | def foo(): | |
| 46 | pass |
|
46 | pass | |
| 47 |
|
47 | |||
| 48 | for i in range(10): |
|
48 | for i in range(10): | |
| 49 | foo() |
|
49 | foo() | |
| 50 | print "This function has run %s times." % i |
|
50 | print "This function has run %s times." % i | |
| 51 | ''' |
|
51 | ''' | |
| 52 |
|
52 | |||
| 53 | def __init__(self, seconds=0, minutes=0, hours=0): |
|
53 | def __init__(self, seconds=0, minutes=0, hours=0): | |
| 54 | self.throttle_period = datetime.timedelta( |
|
54 | self.throttle_period = datetime.timedelta( | |
| 55 | seconds=seconds, minutes=minutes, hours=hours |
|
55 | seconds=seconds, minutes=minutes, hours=hours | |
| 56 | ) |
|
56 | ) | |
| 57 |
|
57 | |||
| 58 | self.time_of_last_call = datetime.datetime.min |
|
58 | self.time_of_last_call = datetime.datetime.min | |
| 59 |
|
59 | |||
| 60 | def __call__(self, fn): |
|
60 | def __call__(self, fn): | |
| 61 | @wraps(fn) |
|
61 | @wraps(fn) | |
| 62 | def wrapper(*args, **kwargs): |
|
62 | def wrapper(*args, **kwargs): | |
| 63 | coerce = kwargs.pop('coerce', None) |
|
63 | coerce = kwargs.pop('coerce', None) | |
| 64 | if coerce: |
|
64 | if coerce: | |
| 65 | self.time_of_last_call = datetime.datetime.now() |
|
65 | self.time_of_last_call = datetime.datetime.now() | |
| 66 | return fn(*args, **kwargs) |
|
66 | return fn(*args, **kwargs) | |
| 67 | else: |
|
67 | else: | |
| 68 | now = datetime.datetime.now() |
|
68 | now = datetime.datetime.now() | |
| 69 | time_since_last_call = now - self.time_of_last_call |
|
69 | time_since_last_call = now - self.time_of_last_call | |
| 70 | time_left = self.throttle_period - time_since_last_call |
|
70 | time_left = self.throttle_period - time_since_last_call | |
| 71 |
|
71 | |||
| 72 | if time_left > datetime.timedelta(seconds=0): |
|
72 | if time_left > datetime.timedelta(seconds=0): | |
| 73 | return |
|
73 | return | |
| 74 |
|
74 | |||
| 75 | self.time_of_last_call = datetime.datetime.now() |
|
75 | self.time_of_last_call = datetime.datetime.now() | |
| 76 | return fn(*args, **kwargs) |
|
76 | return fn(*args, **kwargs) | |
| 77 |
|
77 | |||
| 78 | return wrapper |
|
78 | return wrapper | |
| 79 |
|
79 | |||
| 80 | class Data(object): |
|
80 | class Data(object): | |
| 81 | ''' |
|
81 | ''' | |
| 82 | Object to hold data to be plotted |
|
82 | Object to hold data to be plotted | |
| 83 | ''' |
|
83 | ''' | |
| 84 |
|
84 | |||
| 85 | def __init__(self, plottypes, throttle_value, exp_code): |
|
85 | def __init__(self, plottypes, throttle_value, exp_code): | |
| 86 | self.plottypes = plottypes |
|
86 | self.plottypes = plottypes | |
| 87 | self.throttle = throttle_value |
|
87 | self.throttle = throttle_value | |
| 88 | self.exp_code = exp_code |
|
88 | self.exp_code = exp_code | |
| 89 | self.ended = False |
|
89 | self.ended = False | |
| 90 | self.localtime = False |
|
90 | self.localtime = False | |
| 91 | self.__times = [] |
|
91 | self.__times = [] | |
| 92 | self.__heights = [] |
|
92 | self.__heights = [] | |
| 93 |
|
93 | |||
| 94 | def __str__(self): |
|
94 | def __str__(self): | |
| 95 | dum = ['{}{}'.format(key, self.shape(key)) for key in self.data] |
|
95 | dum = ['{}{}'.format(key, self.shape(key)) for key in self.data] | |
| 96 | return 'Data[{}][{}]'.format(';'.join(dum), len(self.__times)) |
|
96 | return 'Data[{}][{}]'.format(';'.join(dum), len(self.__times)) | |
| 97 |
|
97 | |||
| 98 | def __len__(self): |
|
98 | def __len__(self): | |
| 99 | return len(self.__times) |
|
99 | return len(self.__times) | |
| 100 |
|
100 | |||
| 101 | def __getitem__(self, key): |
|
101 | def __getitem__(self, key): | |
| 102 | if key not in self.data: |
|
102 | if key not in self.data: | |
| 103 | raise KeyError(log.error('Missing key: {}'.format(key))) |
|
103 | raise KeyError(log.error('Missing key: {}'.format(key))) | |
| 104 |
|
104 | |||
| 105 | if 'spc' in key: |
|
105 | if 'spc' in key: | |
| 106 | ret = self.data[key] |
|
106 | ret = self.data[key] | |
| 107 | else: |
|
107 | else: | |
| 108 | ret = numpy.array([self.data[key][x] for x in self.times]) |
|
108 | ret = numpy.array([self.data[key][x] for x in self.times]) | |
| 109 | if ret.ndim > 1: |
|
109 | if ret.ndim > 1: | |
| 110 | ret = numpy.swapaxes(ret, 0, 1) |
|
110 | ret = numpy.swapaxes(ret, 0, 1) | |
| 111 | return ret |
|
111 | return ret | |
| 112 |
|
112 | |||
| 113 | def __contains__(self, key): |
|
113 | def __contains__(self, key): | |
| 114 | return key in self.data |
|
114 | return key in self.data | |
| 115 |
|
115 | |||
| 116 | def setup(self): |
|
116 | def setup(self): | |
| 117 | ''' |
|
117 | ''' | |
| 118 | Configure object |
|
118 | Configure object | |
| 119 | ''' |
|
119 | ''' | |
| 120 |
|
120 | |||
| 121 | self.ended = False |
|
121 | self.ended = False | |
| 122 | self.data = {} |
|
122 | self.data = {} | |
| 123 | self.__times = [] |
|
123 | self.__times = [] | |
| 124 | self.__heights = [] |
|
124 | self.__heights = [] | |
| 125 | self.__all_heights = set() |
|
125 | self.__all_heights = set() | |
| 126 | for plot in self.plottypes: |
|
126 | for plot in self.plottypes: | |
| 127 | if 'snr' in plot: |
|
127 | if 'snr' in plot: | |
| 128 | plot = 'snr' |
|
128 | plot = 'snr' | |
| 129 | self.data[plot] = {} |
|
129 | self.data[plot] = {} | |
| 130 |
|
130 | |||
| 131 | def shape(self, key): |
|
131 | def shape(self, key): | |
| 132 | ''' |
|
132 | ''' | |
| 133 | Get the shape of the one-element data for the given key |
|
133 | Get the shape of the one-element data for the given key | |
| 134 | ''' |
|
134 | ''' | |
| 135 |
|
135 | |||
| 136 | if len(self.data[key]): |
|
136 | if len(self.data[key]): | |
| 137 | if 'spc' in key: |
|
137 | if 'spc' in key: | |
| 138 | return self.data[key].shape |
|
138 | return self.data[key].shape | |
| 139 | return self.data[key][self.__times[0]].shape |
|
139 | return self.data[key][self.__times[0]].shape | |
| 140 | return (0,) |
|
140 | return (0,) | |
| 141 |
|
141 | |||
| 142 | def update(self, dataOut, tm): |
|
142 | def update(self, dataOut, tm): | |
| 143 | ''' |
|
143 | ''' | |
| 144 | Update data object with new dataOut |
|
144 | Update data object with new dataOut | |
| 145 | ''' |
|
145 | ''' | |
| 146 |
|
146 | |||
| 147 | if tm in self.__times: |
|
147 | if tm in self.__times: | |
| 148 | return |
|
148 | return | |
| 149 |
|
149 | |||
| 150 | self.parameters = getattr(dataOut, 'parameters', []) |
|
150 | self.parameters = getattr(dataOut, 'parameters', []) | |
| 151 | if hasattr(dataOut, 'pairsList'): |
|
151 | if hasattr(dataOut, 'pairsList'): | |
| 152 | self.pairs = dataOut.pairsList |
|
152 | self.pairs = dataOut.pairsList | |
| 153 | self.channels = dataOut.channelList |
|
153 | self.channels = dataOut.channelList | |
| 154 | self.interval = dataOut.getTimeInterval() |
|
154 | self.interval = dataOut.getTimeInterval() | |
| 155 | self.localtime = dataOut.useLocalTime |
|
155 | self.localtime = dataOut.useLocalTime | |
| 156 | if 'spc' in self.plottypes or 'cspc' in self.plottypes: |
|
156 | if 'spc' in self.plottypes or 'cspc' in self.plottypes: | |
| 157 | self.xrange = (dataOut.getFreqRange(1)/1000., dataOut.getAcfRange(1), dataOut.getVelRange(1)) |
|
157 | self.xrange = (dataOut.getFreqRange(1)/1000., dataOut.getAcfRange(1), dataOut.getVelRange(1)) | |
| 158 | self.__heights.append(dataOut.heightList) |
|
158 | self.__heights.append(dataOut.heightList) | |
| 159 | self.__all_heights.update(dataOut.heightList) |
|
159 | self.__all_heights.update(dataOut.heightList) | |
| 160 | self.__times.append(tm) |
|
160 | self.__times.append(tm) | |
| 161 |
|
161 | |||
| 162 | for plot in self.plottypes: |
|
162 | for plot in self.plottypes: | |
| 163 | if plot == 'spc': |
|
163 | if plot == 'spc': | |
| 164 | z = dataOut.data_spc/dataOut.normFactor |
|
164 | z = dataOut.data_spc/dataOut.normFactor | |
| 165 | self.data[plot] = 10*numpy.log10(z) |
|
165 | self.data[plot] = 10*numpy.log10(z) | |
| 166 | if plot == 'cspc': |
|
166 | if plot == 'cspc': | |
| 167 | self.data[plot] = dataOut.data_cspc |
|
167 | self.data[plot] = dataOut.data_cspc | |
| 168 | if plot == 'noise': |
|
168 | if plot == 'noise': | |
| 169 | self.data[plot][tm] = 10*numpy.log10(dataOut.getNoise()/dataOut.normFactor) |
|
169 | self.data[plot][tm] = 10*numpy.log10(dataOut.getNoise()/dataOut.normFactor) | |
| 170 | if plot == 'rti': |
|
170 | if plot == 'rti': | |
| 171 | self.data[plot][tm] = dataOut.getPower() |
|
171 | self.data[plot][tm] = dataOut.getPower() | |
| 172 | if plot == 'snr_db': |
|
172 | if plot == 'snr_db': | |
| 173 | self.data['snr'][tm] = dataOut.data_SNR |
|
173 | self.data['snr'][tm] = dataOut.data_SNR | |
| 174 | if plot == 'snr': |
|
174 | if plot == 'snr': | |
| 175 | self.data[plot][tm] = 10*numpy.log10(dataOut.data_SNR) |
|
175 | self.data[plot][tm] = 10*numpy.log10(dataOut.data_SNR) | |
| 176 | if plot == 'dop': |
|
176 | if plot == 'dop': | |
| 177 | self.data[plot][tm] = 10*numpy.log10(dataOut.data_DOP) |
|
177 | self.data[plot][tm] = 10*numpy.log10(dataOut.data_DOP) | |
| 178 | if plot == 'mean': |
|
178 | if plot == 'mean': | |
| 179 | self.data[plot][tm] = dataOut.data_MEAN |
|
179 | self.data[plot][tm] = dataOut.data_MEAN | |
| 180 | if plot == 'std': |
|
180 | if plot == 'std': | |
| 181 | self.data[plot][tm] = dataOut.data_STD |
|
181 | self.data[plot][tm] = dataOut.data_STD | |
| 182 | if plot == 'coh': |
|
182 | if plot == 'coh': | |
| 183 | self.data[plot][tm] = dataOut.getCoherence() |
|
183 | self.data[plot][tm] = dataOut.getCoherence() | |
| 184 | if plot == 'phase': |
|
184 | if plot == 'phase': | |
| 185 | self.data[plot][tm] = dataOut.getCoherence(phase=True) |
|
185 | self.data[plot][tm] = dataOut.getCoherence(phase=True) | |
| 186 | if plot == 'output': |
|
186 | if plot == 'output': | |
| 187 | self.data[plot][tm] = dataOut.data_output |
|
187 | self.data[plot][tm] = dataOut.data_output | |
| 188 | if plot == 'param': |
|
188 | if plot == 'param': | |
| 189 | self.data[plot][tm] = dataOut.data_param |
|
189 | self.data[plot][tm] = dataOut.data_param | |
| 190 |
|
190 | |||
| 191 | def normalize_heights(self): |
|
191 | def normalize_heights(self): | |
| 192 | ''' |
|
192 | ''' | |
| 193 | Ensure same-dimension of the data for different heighList |
|
193 | Ensure same-dimension of the data for different heighList | |
| 194 | ''' |
|
194 | ''' | |
| 195 |
|
195 | |||
| 196 | H = numpy.array(list(self.__all_heights)) |
|
196 | H = numpy.array(list(self.__all_heights)) | |
| 197 | H.sort() |
|
197 | H.sort() | |
| 198 | for key in self.data: |
|
198 | for key in self.data: | |
| 199 | shape = self.shape(key)[:-1] + H.shape |
|
199 | shape = self.shape(key)[:-1] + H.shape | |
| 200 | for tm, obj in self.data[key].items(): |
|
200 | for tm, obj in self.data[key].items(): | |
| 201 | h = self.__heights[self.__times.index(tm)] |
|
201 | h = self.__heights[self.__times.index(tm)] | |
| 202 | if H.size == h.size: |
|
202 | if H.size == h.size: | |
| 203 | continue |
|
203 | continue | |
| 204 | index = numpy.where(numpy.in1d(H, h))[0] |
|
204 | index = numpy.where(numpy.in1d(H, h))[0] | |
| 205 | dummy = numpy.zeros(shape) + numpy.nan |
|
205 | dummy = numpy.zeros(shape) + numpy.nan | |
| 206 | if len(shape) == 2: |
|
206 | if len(shape) == 2: | |
| 207 | dummy[:, index] = obj |
|
207 | dummy[:, index] = obj | |
| 208 | else: |
|
208 | else: | |
| 209 | dummy[index] = obj |
|
209 | dummy[index] = obj | |
| 210 | self.data[key][tm] = dummy |
|
210 | self.data[key][tm] = dummy | |
| 211 |
|
211 | |||
| 212 | self.__heights = [H for tm in self.__times] |
|
212 | self.__heights = [H for tm in self.__times] | |
| 213 |
|
213 | |||
| 214 | def jsonify(self, decimate=False): |
|
214 | def jsonify(self, decimate=False): | |
| 215 | ''' |
|
215 | ''' | |
| 216 | Convert data to json |
|
216 | Convert data to json | |
| 217 | ''' |
|
217 | ''' | |
| 218 |
|
218 | |||
| 219 | data = {} |
|
219 | data = {} | |
| 220 | tm = self.times[-1] |
|
220 | tm = self.times[-1] | |
| 221 |
|
221 | |||
| 222 | for key in self.data: |
|
222 | for key in self.data: | |
| 223 | if key in ('spc', 'cspc'): |
|
223 | if key in ('spc', 'cspc'): | |
| 224 |
d |
|
224 | dx = int(self.data[key].shape[1]/MAXNUMX) + 1 | |
|
|
225 | dy = int(self.data[key].shape[2]/MAXNUMY) + 1 | |||
|
|
226 | data[key] = roundFloats(self.data[key][::, ::dx, ::dy].tolist()) | |||
| 225 | else: |
|
227 | else: | |
| 226 | data[key] = roundFloats(self.data[key][tm].tolist()) |
|
228 | data[key] = roundFloats(self.data[key][tm].tolist()) | |
| 227 |
|
229 | |||
| 228 | ret = {'data': data} |
|
230 | ret = {'data': data} | |
| 229 | ret['exp_code'] = self.exp_code |
|
231 | ret['exp_code'] = self.exp_code | |
| 230 | ret['time'] = tm |
|
232 | ret['time'] = tm | |
| 231 | ret['interval'] = self.interval |
|
233 | ret['interval'] = self.interval | |
| 232 |
ret[' |
|
234 | ret['localtime'] = self.localtime | |
| 233 |
ret['y |
|
235 | ret['yrange'] = roundFloats(self.heights.tolist()) | |
| 234 | ret['ystep'] = self.heights[1] - self.heights[0] |
|
236 | if key in ('spc', 'cspc'): | |
| 235 |
|
237 | ret['xrange'] = roundFloats(self.xrange[2][::dx].tolist()) | ||
|
|
238 | if hasattr(self, 'pairs'): | |||
|
|
239 | ret['pairs'] = self.pairs | |||
| 236 | return json.dumps(ret) |
|
240 | return json.dumps(ret) | |
| 237 |
|
241 | |||
| 238 | @property |
|
242 | @property | |
| 239 | def times(self): |
|
243 | def times(self): | |
| 240 | ''' |
|
244 | ''' | |
| 241 | Return the list of times of the current data |
|
245 | Return the list of times of the current data | |
| 242 | ''' |
|
246 | ''' | |
| 243 |
|
247 | |||
| 244 | ret = numpy.array(self.__times) |
|
248 | ret = numpy.array(self.__times) | |
| 245 | ret.sort() |
|
249 | ret.sort() | |
| 246 | return ret |
|
250 | return ret | |
| 247 |
|
251 | |||
| 248 | @property |
|
252 | @property | |
| 249 | def heights(self): |
|
253 | def heights(self): | |
| 250 | ''' |
|
254 | ''' | |
| 251 | Return the list of heights of the current data |
|
255 | Return the list of heights of the current data | |
| 252 | ''' |
|
256 | ''' | |
| 253 |
|
257 | |||
| 254 | return numpy.array(self.__heights[-1]) |
|
258 | return numpy.array(self.__heights[-1]) | |
| 255 |
|
259 | |||
| 256 | class PublishData(Operation): |
|
260 | class PublishData(Operation): | |
| 257 | ''' |
|
261 | ''' | |
| 258 | Operation to send data over zmq. |
|
262 | Operation to send data over zmq. | |
| 259 | ''' |
|
263 | ''' | |
| 260 |
|
264 | |||
| 261 | __attrs__ = ['host', 'port', 'delay', 'zeromq', 'mqtt', 'verbose'] |
|
265 | __attrs__ = ['host', 'port', 'delay', 'zeromq', 'mqtt', 'verbose'] | |
| 262 |
|
266 | |||
| 263 | def __init__(self, **kwargs): |
|
267 | def __init__(self, **kwargs): | |
| 264 | """Inicio.""" |
|
268 | """Inicio.""" | |
| 265 | Operation.__init__(self, **kwargs) |
|
269 | Operation.__init__(self, **kwargs) | |
| 266 | self.isConfig = False |
|
270 | self.isConfig = False | |
| 267 | self.client = None |
|
271 | self.client = None | |
| 268 | self.zeromq = None |
|
272 | self.zeromq = None | |
| 269 | self.mqtt = None |
|
273 | self.mqtt = None | |
| 270 |
|
274 | |||
| 271 | def on_disconnect(self, client, userdata, rc): |
|
275 | def on_disconnect(self, client, userdata, rc): | |
| 272 | if rc != 0: |
|
276 | if rc != 0: | |
| 273 | log.warning('Unexpected disconnection.') |
|
277 | log.warning('Unexpected disconnection.') | |
| 274 | self.connect() |
|
278 | self.connect() | |
| 275 |
|
279 | |||
| 276 | def connect(self): |
|
280 | def connect(self): | |
| 277 | log.warning('trying to connect') |
|
281 | log.warning('trying to connect') | |
| 278 | try: |
|
282 | try: | |
| 279 | self.client.connect( |
|
283 | self.client.connect( | |
| 280 | host=self.host, |
|
284 | host=self.host, | |
| 281 | port=self.port, |
|
285 | port=self.port, | |
| 282 | keepalive=60*10, |
|
286 | keepalive=60*10, | |
| 283 | bind_address='') |
|
287 | bind_address='') | |
| 284 | self.client.loop_start() |
|
288 | self.client.loop_start() | |
| 285 | # self.client.publish( |
|
289 | # self.client.publish( | |
| 286 | # self.topic + 'SETUP', |
|
290 | # self.topic + 'SETUP', | |
| 287 | # json.dumps(setup), |
|
291 | # json.dumps(setup), | |
| 288 | # retain=True |
|
292 | # retain=True | |
| 289 | # ) |
|
293 | # ) | |
| 290 | except: |
|
294 | except: | |
| 291 | log.error('MQTT Conection error.') |
|
295 | log.error('MQTT Conection error.') | |
| 292 | self.client = False |
|
296 | self.client = False | |
| 293 |
|
297 | |||
| 294 | def setup(self, port=1883, username=None, password=None, clientId="user", zeromq=1, verbose=True, **kwargs): |
|
298 | def setup(self, port=1883, username=None, password=None, clientId="user", zeromq=1, verbose=True, **kwargs): | |
| 295 | self.counter = 0 |
|
299 | self.counter = 0 | |
| 296 | self.topic = kwargs.get('topic', 'schain') |
|
300 | self.topic = kwargs.get('topic', 'schain') | |
| 297 | self.delay = kwargs.get('delay', 0) |
|
301 | self.delay = kwargs.get('delay', 0) | |
| 298 | self.plottype = kwargs.get('plottype', 'spectra') |
|
302 | self.plottype = kwargs.get('plottype', 'spectra') | |
| 299 | self.host = kwargs.get('host', "10.10.10.82") |
|
303 | self.host = kwargs.get('host', "10.10.10.82") | |
| 300 | self.port = kwargs.get('port', 3000) |
|
304 | self.port = kwargs.get('port', 3000) | |
| 301 | self.clientId = clientId |
|
305 | self.clientId = clientId | |
| 302 | self.cnt = 0 |
|
306 | self.cnt = 0 | |
| 303 | self.zeromq = zeromq |
|
307 | self.zeromq = zeromq | |
| 304 | self.mqtt = kwargs.get('plottype', 0) |
|
308 | self.mqtt = kwargs.get('plottype', 0) | |
| 305 | self.client = None |
|
309 | self.client = None | |
| 306 | self.verbose = verbose |
|
310 | self.verbose = verbose | |
| 307 | setup = [] |
|
311 | setup = [] | |
| 308 | if mqtt is 1: |
|
312 | if mqtt is 1: | |
| 309 | self.client = mqtt.Client( |
|
313 | self.client = mqtt.Client( | |
| 310 | client_id=self.clientId + self.topic + 'SCHAIN', |
|
314 | client_id=self.clientId + self.topic + 'SCHAIN', | |
| 311 | clean_session=True) |
|
315 | clean_session=True) | |
| 312 | self.client.on_disconnect = self.on_disconnect |
|
316 | self.client.on_disconnect = self.on_disconnect | |
| 313 | self.connect() |
|
317 | self.connect() | |
| 314 | for plot in self.plottype: |
|
318 | for plot in self.plottype: | |
| 315 | setup.append({ |
|
319 | setup.append({ | |
| 316 | 'plot': plot, |
|
320 | 'plot': plot, | |
| 317 | 'topic': self.topic + plot, |
|
321 | 'topic': self.topic + plot, | |
| 318 | 'title': getattr(self, plot + '_' + 'title', False), |
|
322 | 'title': getattr(self, plot + '_' + 'title', False), | |
| 319 | 'xlabel': getattr(self, plot + '_' + 'xlabel', False), |
|
323 | 'xlabel': getattr(self, plot + '_' + 'xlabel', False), | |
| 320 | 'ylabel': getattr(self, plot + '_' + 'ylabel', False), |
|
324 | 'ylabel': getattr(self, plot + '_' + 'ylabel', False), | |
| 321 | 'xrange': getattr(self, plot + '_' + 'xrange', False), |
|
325 | 'xrange': getattr(self, plot + '_' + 'xrange', False), | |
| 322 | 'yrange': getattr(self, plot + '_' + 'yrange', False), |
|
326 | 'yrange': getattr(self, plot + '_' + 'yrange', False), | |
| 323 | 'zrange': getattr(self, plot + '_' + 'zrange', False), |
|
327 | 'zrange': getattr(self, plot + '_' + 'zrange', False), | |
| 324 | }) |
|
328 | }) | |
| 325 | if zeromq is 1: |
|
329 | if zeromq is 1: | |
| 326 | context = zmq.Context() |
|
330 | context = zmq.Context() | |
| 327 | self.zmq_socket = context.socket(zmq.PUSH) |
|
331 | self.zmq_socket = context.socket(zmq.PUSH) | |
| 328 | server = kwargs.get('server', 'zmq.pipe') |
|
332 | server = kwargs.get('server', 'zmq.pipe') | |
| 329 |
|
333 | |||
| 330 | if 'tcp://' in server: |
|
334 | if 'tcp://' in server: | |
| 331 | address = server |
|
335 | address = server | |
| 332 | else: |
|
336 | else: | |
| 333 | address = 'ipc:///tmp/%s' % server |
|
337 | address = 'ipc:///tmp/%s' % server | |
| 334 |
|
338 | |||
| 335 | self.zmq_socket.connect(address) |
|
339 | self.zmq_socket.connect(address) | |
| 336 | time.sleep(1) |
|
340 | time.sleep(1) | |
| 337 |
|
341 | |||
| 338 |
|
342 | |||
| 339 | def publish_data(self): |
|
343 | def publish_data(self): | |
| 340 | self.dataOut.finished = False |
|
344 | self.dataOut.finished = False | |
| 341 | if self.mqtt is 1: |
|
345 | if self.mqtt is 1: | |
| 342 | yData = self.dataOut.heightList[:2].tolist() |
|
346 | yData = self.dataOut.heightList[:2].tolist() | |
| 343 | if self.plottype == 'spectra': |
|
347 | if self.plottype == 'spectra': | |
| 344 | data = getattr(self.dataOut, 'data_spc') |
|
348 | data = getattr(self.dataOut, 'data_spc') | |
| 345 | z = data/self.dataOut.normFactor |
|
349 | z = data/self.dataOut.normFactor | |
| 346 | zdB = 10*numpy.log10(z) |
|
350 | zdB = 10*numpy.log10(z) | |
| 347 | xlen, ylen = zdB[0].shape |
|
351 | xlen, ylen = zdB[0].shape | |
| 348 | dx = int(xlen/MAXNUMX) + 1 |
|
352 | dx = int(xlen/MAXNUMX) + 1 | |
| 349 | dy = int(ylen/MAXNUMY) + 1 |
|
353 | dy = int(ylen/MAXNUMY) + 1 | |
| 350 | Z = [0 for i in self.dataOut.channelList] |
|
354 | Z = [0 for i in self.dataOut.channelList] | |
| 351 | for i in self.dataOut.channelList: |
|
355 | for i in self.dataOut.channelList: | |
| 352 | Z[i] = zdB[i][::dx, ::dy].tolist() |
|
356 | Z[i] = zdB[i][::dx, ::dy].tolist() | |
| 353 | payload = { |
|
357 | payload = { | |
| 354 | 'timestamp': self.dataOut.utctime, |
|
358 | 'timestamp': self.dataOut.utctime, | |
| 355 | 'data': roundFloats(Z), |
|
359 | 'data': roundFloats(Z), | |
| 356 | 'channels': ['Ch %s' % ch for ch in self.dataOut.channelList], |
|
360 | 'channels': ['Ch %s' % ch for ch in self.dataOut.channelList], | |
| 357 | 'interval': self.dataOut.getTimeInterval(), |
|
361 | 'interval': self.dataOut.getTimeInterval(), | |
| 358 | 'type': self.plottype, |
|
362 | 'type': self.plottype, | |
| 359 | 'yData': yData |
|
363 | 'yData': yData | |
| 360 | } |
|
364 | } | |
| 361 |
|
365 | |||
| 362 | elif self.plottype in ('rti', 'power'): |
|
366 | elif self.plottype in ('rti', 'power'): | |
| 363 | data = getattr(self.dataOut, 'data_spc') |
|
367 | data = getattr(self.dataOut, 'data_spc') | |
| 364 | z = data/self.dataOut.normFactor |
|
368 | z = data/self.dataOut.normFactor | |
| 365 | avg = numpy.average(z, axis=1) |
|
369 | avg = numpy.average(z, axis=1) | |
| 366 | avgdB = 10*numpy.log10(avg) |
|
370 | avgdB = 10*numpy.log10(avg) | |
| 367 | xlen, ylen = z[0].shape |
|
371 | xlen, ylen = z[0].shape | |
| 368 | dy = numpy.floor(ylen/self.__MAXNUMY) + 1 |
|
372 | dy = numpy.floor(ylen/self.__MAXNUMY) + 1 | |
| 369 | AVG = [0 for i in self.dataOut.channelList] |
|
373 | AVG = [0 for i in self.dataOut.channelList] | |
| 370 | for i in self.dataOut.channelList: |
|
374 | for i in self.dataOut.channelList: | |
| 371 | AVG[i] = avgdB[i][::dy].tolist() |
|
375 | AVG[i] = avgdB[i][::dy].tolist() | |
| 372 | payload = { |
|
376 | payload = { | |
| 373 | 'timestamp': self.dataOut.utctime, |
|
377 | 'timestamp': self.dataOut.utctime, | |
| 374 | 'data': roundFloats(AVG), |
|
378 | 'data': roundFloats(AVG), | |
| 375 | 'channels': ['Ch %s' % ch for ch in self.dataOut.channelList], |
|
379 | 'channels': ['Ch %s' % ch for ch in self.dataOut.channelList], | |
| 376 | 'interval': self.dataOut.getTimeInterval(), |
|
380 | 'interval': self.dataOut.getTimeInterval(), | |
| 377 | 'type': self.plottype, |
|
381 | 'type': self.plottype, | |
| 378 | 'yData': yData |
|
382 | 'yData': yData | |
| 379 | } |
|
383 | } | |
| 380 | elif self.plottype == 'noise': |
|
384 | elif self.plottype == 'noise': | |
| 381 | noise = self.dataOut.getNoise()/self.dataOut.normFactor |
|
385 | noise = self.dataOut.getNoise()/self.dataOut.normFactor | |
| 382 | noisedB = 10*numpy.log10(noise) |
|
386 | noisedB = 10*numpy.log10(noise) | |
| 383 | payload = { |
|
387 | payload = { | |
| 384 | 'timestamp': self.dataOut.utctime, |
|
388 | 'timestamp': self.dataOut.utctime, | |
| 385 | 'data': roundFloats(noisedB.reshape(-1, 1).tolist()), |
|
389 | 'data': roundFloats(noisedB.reshape(-1, 1).tolist()), | |
| 386 | 'channels': ['Ch %s' % ch for ch in self.dataOut.channelList], |
|
390 | 'channels': ['Ch %s' % ch for ch in self.dataOut.channelList], | |
| 387 | 'interval': self.dataOut.getTimeInterval(), |
|
391 | 'interval': self.dataOut.getTimeInterval(), | |
| 388 | 'type': self.plottype, |
|
392 | 'type': self.plottype, | |
| 389 | 'yData': yData |
|
393 | 'yData': yData | |
| 390 | } |
|
394 | } | |
| 391 | elif self.plottype == 'snr': |
|
395 | elif self.plottype == 'snr': | |
| 392 | data = getattr(self.dataOut, 'data_SNR') |
|
396 | data = getattr(self.dataOut, 'data_SNR') | |
| 393 | avgdB = 10*numpy.log10(data) |
|
397 | avgdB = 10*numpy.log10(data) | |
| 394 |
|
398 | |||
| 395 | ylen = data[0].size |
|
399 | ylen = data[0].size | |
| 396 | dy = numpy.floor(ylen/self.__MAXNUMY) + 1 |
|
400 | dy = numpy.floor(ylen/self.__MAXNUMY) + 1 | |
| 397 | AVG = [0 for i in self.dataOut.channelList] |
|
401 | AVG = [0 for i in self.dataOut.channelList] | |
| 398 | for i in self.dataOut.channelList: |
|
402 | for i in self.dataOut.channelList: | |
| 399 | AVG[i] = avgdB[i][::dy].tolist() |
|
403 | AVG[i] = avgdB[i][::dy].tolist() | |
| 400 | payload = { |
|
404 | payload = { | |
| 401 | 'timestamp': self.dataOut.utctime, |
|
405 | 'timestamp': self.dataOut.utctime, | |
| 402 | 'data': roundFloats(AVG), |
|
406 | 'data': roundFloats(AVG), | |
| 403 | 'channels': ['Ch %s' % ch for ch in self.dataOut.channelList], |
|
407 | 'channels': ['Ch %s' % ch for ch in self.dataOut.channelList], | |
| 404 | 'type': self.plottype, |
|
408 | 'type': self.plottype, | |
| 405 | 'yData': yData |
|
409 | 'yData': yData | |
| 406 | } |
|
410 | } | |
| 407 | else: |
|
411 | else: | |
| 408 | print "Tipo de grafico invalido" |
|
412 | print "Tipo de grafico invalido" | |
| 409 | payload = { |
|
413 | payload = { | |
| 410 | 'data': 'None', |
|
414 | 'data': 'None', | |
| 411 | 'timestamp': 'None', |
|
415 | 'timestamp': 'None', | |
| 412 | 'type': None |
|
416 | 'type': None | |
| 413 | } |
|
417 | } | |
| 414 |
|
418 | |||
| 415 | self.client.publish(self.topic + self.plottype, json.dumps(payload), qos=0) |
|
419 | self.client.publish(self.topic + self.plottype, json.dumps(payload), qos=0) | |
| 416 |
|
420 | |||
| 417 | if self.zeromq is 1: |
|
421 | if self.zeromq is 1: | |
| 418 | if self.verbose: |
|
422 | if self.verbose: | |
| 419 | log.log( |
|
423 | log.log( | |
| 420 | 'Sending {} - {}'.format(self.dataOut.type, self.dataOut.datatime), |
|
424 | 'Sending {} - {}'.format(self.dataOut.type, self.dataOut.datatime), | |
| 421 | self.name |
|
425 | self.name | |
| 422 | ) |
|
426 | ) | |
| 423 | self.zmq_socket.send_pyobj(self.dataOut) |
|
427 | self.zmq_socket.send_pyobj(self.dataOut) | |
| 424 |
|
428 | |||
| 425 | def run(self, dataOut, **kwargs): |
|
429 | def run(self, dataOut, **kwargs): | |
| 426 | self.dataOut = dataOut |
|
430 | self.dataOut = dataOut | |
| 427 | if not self.isConfig: |
|
431 | if not self.isConfig: | |
| 428 | self.setup(**kwargs) |
|
432 | self.setup(**kwargs) | |
| 429 | self.isConfig = True |
|
433 | self.isConfig = True | |
| 430 |
|
434 | |||
| 431 | self.publish_data() |
|
435 | self.publish_data() | |
| 432 | time.sleep(self.delay) |
|
436 | time.sleep(self.delay) | |
| 433 |
|
437 | |||
| 434 | def close(self): |
|
438 | def close(self): | |
| 435 | if self.zeromq is 1: |
|
439 | if self.zeromq is 1: | |
| 436 | self.dataOut.finished = True |
|
440 | self.dataOut.finished = True | |
| 437 | self.zmq_socket.send_pyobj(self.dataOut) |
|
441 | self.zmq_socket.send_pyobj(self.dataOut) | |
| 438 | time.sleep(0.1) |
|
442 | time.sleep(0.1) | |
| 439 | self.zmq_socket.close() |
|
443 | self.zmq_socket.close() | |
| 440 | if self.client: |
|
444 | if self.client: | |
| 441 | self.client.loop_stop() |
|
445 | self.client.loop_stop() | |
| 442 | self.client.disconnect() |
|
446 | self.client.disconnect() | |
| 443 |
|
447 | |||
| 444 |
|
448 | |||
| 445 | class ReceiverData(ProcessingUnit): |
|
449 | class ReceiverData(ProcessingUnit): | |
| 446 |
|
450 | |||
| 447 | __attrs__ = ['server'] |
|
451 | __attrs__ = ['server'] | |
| 448 |
|
452 | |||
| 449 | def __init__(self, **kwargs): |
|
453 | def __init__(self, **kwargs): | |
| 450 |
|
454 | |||
| 451 | ProcessingUnit.__init__(self, **kwargs) |
|
455 | ProcessingUnit.__init__(self, **kwargs) | |
| 452 |
|
456 | |||
| 453 | self.isConfig = False |
|
457 | self.isConfig = False | |
| 454 | server = kwargs.get('server', 'zmq.pipe') |
|
458 | server = kwargs.get('server', 'zmq.pipe') | |
| 455 | if 'tcp://' in server: |
|
459 | if 'tcp://' in server: | |
| 456 | address = server |
|
460 | address = server | |
| 457 | else: |
|
461 | else: | |
| 458 | address = 'ipc:///tmp/%s' % server |
|
462 | address = 'ipc:///tmp/%s' % server | |
| 459 |
|
463 | |||
| 460 | self.address = address |
|
464 | self.address = address | |
| 461 | self.dataOut = JROData() |
|
465 | self.dataOut = JROData() | |
| 462 |
|
466 | |||
| 463 | def setup(self): |
|
467 | def setup(self): | |
| 464 |
|
468 | |||
| 465 | self.context = zmq.Context() |
|
469 | self.context = zmq.Context() | |
| 466 | self.receiver = self.context.socket(zmq.PULL) |
|
470 | self.receiver = self.context.socket(zmq.PULL) | |
| 467 | self.receiver.bind(self.address) |
|
471 | self.receiver.bind(self.address) | |
| 468 | time.sleep(0.5) |
|
472 | time.sleep(0.5) | |
| 469 | log.success('ReceiverData from {}'.format(self.address)) |
|
473 | log.success('ReceiverData from {}'.format(self.address)) | |
| 470 |
|
474 | |||
| 471 |
|
475 | |||
| 472 | def run(self): |
|
476 | def run(self): | |
| 473 |
|
477 | |||
| 474 | if not self.isConfig: |
|
478 | if not self.isConfig: | |
| 475 | self.setup() |
|
479 | self.setup() | |
| 476 | self.isConfig = True |
|
480 | self.isConfig = True | |
| 477 |
|
481 | |||
| 478 | self.dataOut = self.receiver.recv_pyobj() |
|
482 | self.dataOut = self.receiver.recv_pyobj() | |
| 479 | log.log('{} - {}'.format(self.dataOut.type, |
|
483 | log.log('{} - {}'.format(self.dataOut.type, | |
| 480 | self.dataOut.datatime.ctime(),), |
|
484 | self.dataOut.datatime.ctime(),), | |
| 481 | 'Receiving') |
|
485 | 'Receiving') | |
| 482 |
|
486 | |||
| 483 |
|
487 | |||
| 484 | class PlotterReceiver(ProcessingUnit, Process): |
|
488 | class PlotterReceiver(ProcessingUnit, Process): | |
| 485 |
|
489 | |||
| 486 | throttle_value = 5 |
|
490 | throttle_value = 5 | |
| 487 | __attrs__ = ['server', 'plottypes', 'realtime', 'localtime', 'throttle', |
|
491 | __attrs__ = ['server', 'plottypes', 'realtime', 'localtime', 'throttle', | |
| 488 | 'exp_code', 'web_server'] |
|
492 | 'exp_code', 'web_server'] | |
| 489 |
|
493 | |||
| 490 | def __init__(self, **kwargs): |
|
494 | def __init__(self, **kwargs): | |
| 491 |
|
495 | |||
| 492 | ProcessingUnit.__init__(self, **kwargs) |
|
496 | ProcessingUnit.__init__(self, **kwargs) | |
| 493 | Process.__init__(self) |
|
497 | Process.__init__(self) | |
| 494 | self.mp = False |
|
498 | self.mp = False | |
| 495 | self.isConfig = False |
|
499 | self.isConfig = False | |
| 496 | self.isWebConfig = False |
|
500 | self.isWebConfig = False | |
| 497 | self.connections = 0 |
|
501 | self.connections = 0 | |
| 498 | server = kwargs.get('server', 'zmq.pipe') |
|
502 | server = kwargs.get('server', 'zmq.pipe') | |
| 499 | web_server = kwargs.get('web_server', None) |
|
503 | web_server = kwargs.get('web_server', None) | |
| 500 | if 'tcp://' in server: |
|
504 | if 'tcp://' in server: | |
| 501 | address = server |
|
505 | address = server | |
| 502 | else: |
|
506 | else: | |
| 503 | address = 'ipc:///tmp/%s' % server |
|
507 | address = 'ipc:///tmp/%s' % server | |
| 504 | self.address = address |
|
508 | self.address = address | |
| 505 | self.web_address = web_server |
|
509 | self.web_address = web_server | |
| 506 | self.plottypes = [s.strip() for s in kwargs.get('plottypes', 'rti').split(',')] |
|
510 | self.plottypes = [s.strip() for s in kwargs.get('plottypes', 'rti').split(',')] | |
| 507 | self.realtime = kwargs.get('realtime', False) |
|
511 | self.realtime = kwargs.get('realtime', False) | |
| 508 | self.localtime = kwargs.get('localtime', True) |
|
512 | self.localtime = kwargs.get('localtime', True) | |
| 509 | self.throttle_value = kwargs.get('throttle', 5) |
|
513 | self.throttle_value = kwargs.get('throttle', 5) | |
| 510 | self.exp_code = kwargs.get('exp_code', None) |
|
514 | self.exp_code = kwargs.get('exp_code', None) | |
| 511 | self.sendData = self.initThrottle(self.throttle_value) |
|
515 | self.sendData = self.initThrottle(self.throttle_value) | |
| 512 | self.dates = [] |
|
516 | self.dates = [] | |
| 513 | self.setup() |
|
517 | self.setup() | |
| 514 |
|
518 | |||
| 515 | def setup(self): |
|
519 | def setup(self): | |
| 516 |
|
520 | |||
| 517 | self.data = Data(self.plottypes, self.throttle_value, self.exp_code) |
|
521 | self.data = Data(self.plottypes, self.throttle_value, self.exp_code) | |
| 518 | self.isConfig = True |
|
522 | self.isConfig = True | |
| 519 |
|
523 | |||
| 520 | def event_monitor(self, monitor): |
|
524 | def event_monitor(self, monitor): | |
| 521 |
|
525 | |||
| 522 | events = {} |
|
526 | events = {} | |
| 523 |
|
527 | |||
| 524 | for name in dir(zmq): |
|
528 | for name in dir(zmq): | |
| 525 | if name.startswith('EVENT_'): |
|
529 | if name.startswith('EVENT_'): | |
| 526 | value = getattr(zmq, name) |
|
530 | value = getattr(zmq, name) | |
| 527 | events[value] = name |
|
531 | events[value] = name | |
| 528 |
|
532 | |||
| 529 | while monitor.poll(): |
|
533 | while monitor.poll(): | |
| 530 | evt = recv_monitor_message(monitor) |
|
534 | evt = recv_monitor_message(monitor) | |
| 531 | if evt['event'] == 32: |
|
535 | if evt['event'] == 32: | |
| 532 | self.connections += 1 |
|
536 | self.connections += 1 | |
| 533 | if evt['event'] == 512: |
|
537 | if evt['event'] == 512: | |
| 534 | pass |
|
538 | pass | |
| 535 |
|
539 | |||
| 536 | evt.update({'description': events[evt['event']]}) |
|
540 | evt.update({'description': events[evt['event']]}) | |
| 537 |
|
541 | |||
| 538 | if evt['event'] == zmq.EVENT_MONITOR_STOPPED: |
|
542 | if evt['event'] == zmq.EVENT_MONITOR_STOPPED: | |
| 539 | break |
|
543 | break | |
| 540 | monitor.close() |
|
544 | monitor.close() | |
| 541 | print('event monitor thread done!') |
|
545 | print('event monitor thread done!') | |
| 542 |
|
546 | |||
| 543 | def initThrottle(self, throttle_value): |
|
547 | def initThrottle(self, throttle_value): | |
| 544 |
|
548 | |||
| 545 | @throttle(seconds=throttle_value) |
|
549 | @throttle(seconds=throttle_value) | |
| 546 | def sendDataThrottled(fn_sender, data): |
|
550 | def sendDataThrottled(fn_sender, data): | |
| 547 | fn_sender(data) |
|
551 | fn_sender(data) | |
| 548 |
|
552 | |||
| 549 | return sendDataThrottled |
|
553 | return sendDataThrottled | |
| 550 |
|
554 | |||
| 551 | def send(self, data): |
|
555 | def send(self, data): | |
| 552 | log.success('Sending {}'.format(data), self.name) |
|
556 | log.success('Sending {}'.format(data), self.name) | |
| 553 | self.sender.send_pyobj(data) |
|
557 | self.sender.send_pyobj(data) | |
| 554 |
|
558 | |||
| 555 | def run(self): |
|
559 | def run(self): | |
| 556 |
|
560 | |||
| 557 | log.success( |
|
561 | log.success( | |
| 558 | 'Starting from {}'.format(self.address), |
|
562 | 'Starting from {}'.format(self.address), | |
| 559 | self.name |
|
563 | self.name | |
| 560 | ) |
|
564 | ) | |
| 561 |
|
565 | |||
| 562 | self.context = zmq.Context() |
|
566 | self.context = zmq.Context() | |
| 563 | self.receiver = self.context.socket(zmq.PULL) |
|
567 | self.receiver = self.context.socket(zmq.PULL) | |
| 564 | self.receiver.bind(self.address) |
|
568 | self.receiver.bind(self.address) | |
| 565 | monitor = self.receiver.get_monitor_socket() |
|
569 | monitor = self.receiver.get_monitor_socket() | |
| 566 | self.sender = self.context.socket(zmq.PUB) |
|
570 | self.sender = self.context.socket(zmq.PUB) | |
| 567 | if self.web_address: |
|
571 | if self.web_address: | |
| 568 | log.success( |
|
572 | log.success( | |
| 569 | 'Sending to web: {}'.format(self.web_address), |
|
573 | 'Sending to web: {}'.format(self.web_address), | |
| 570 | self.name |
|
574 | self.name | |
| 571 | ) |
|
575 | ) | |
| 572 | self.sender_web = self.context.socket(zmq.PUB) |
|
576 | self.sender_web = self.context.socket(zmq.PUB) | |
| 573 | self.sender_web.connect(self.web_address) |
|
577 | self.sender_web.connect(self.web_address) | |
| 574 | time.sleep(1) |
|
578 | time.sleep(1) | |
| 575 |
|
579 | |||
| 576 | if 'server' in self.kwargs: |
|
580 | if 'server' in self.kwargs: | |
| 577 | self.sender.bind("ipc:///tmp/{}.plots".format(self.kwargs['server'])) |
|
581 | self.sender.bind("ipc:///tmp/{}.plots".format(self.kwargs['server'])) | |
| 578 | else: |
|
582 | else: | |
| 579 | self.sender.bind("ipc:///tmp/zmq.plots") |
|
583 | self.sender.bind("ipc:///tmp/zmq.plots") | |
| 580 |
|
584 | |||
| 581 | time.sleep(2) |
|
585 | time.sleep(2) | |
| 582 |
|
586 | |||
| 583 | t = Thread(target=self.event_monitor, args=(monitor,)) |
|
587 | t = Thread(target=self.event_monitor, args=(monitor,)) | |
| 584 | t.start() |
|
588 | t.start() | |
| 585 |
|
589 | |||
| 586 | while True: |
|
590 | while True: | |
| 587 | dataOut = self.receiver.recv_pyobj() |
|
591 | dataOut = self.receiver.recv_pyobj() | |
| 588 | if not dataOut.flagNoData: |
|
592 | if not dataOut.flagNoData: | |
| 589 | if dataOut.type == 'Parameters': |
|
593 | if dataOut.type == 'Parameters': | |
| 590 | tm = dataOut.utctimeInit |
|
594 | tm = dataOut.utctimeInit | |
| 591 | else: |
|
595 | else: | |
| 592 | tm = dataOut.utctime |
|
596 | tm = dataOut.utctime | |
| 593 | if dataOut.useLocalTime: |
|
597 | if dataOut.useLocalTime: | |
| 594 | if not self.localtime: |
|
598 | if not self.localtime: | |
| 595 | tm += time.timezone |
|
599 | tm += time.timezone | |
| 596 | dt = datetime.datetime.fromtimestamp(tm).date() |
|
600 | dt = datetime.datetime.fromtimestamp(tm).date() | |
| 597 | else: |
|
601 | else: | |
| 598 | if self.localtime: |
|
602 | if self.localtime: | |
| 599 | tm -= time.timezone |
|
603 | tm -= time.timezone | |
| 600 | dt = datetime.datetime.utcfromtimestamp(tm).date() |
|
604 | dt = datetime.datetime.utcfromtimestamp(tm).date() | |
| 601 | coerce = False |
|
605 | coerce = False | |
| 602 | if dt not in self.dates: |
|
606 | if dt not in self.dates: | |
| 603 | if self.data: |
|
607 | if self.data: | |
| 604 | self.data.ended = True |
|
608 | self.data.ended = True | |
| 605 | self.send(self.data) |
|
609 | self.send(self.data) | |
| 606 | coerce = True |
|
610 | coerce = True | |
| 607 | self.data.setup() |
|
611 | self.data.setup() | |
| 608 | self.dates.append(dt) |
|
612 | self.dates.append(dt) | |
| 609 |
|
613 | |||
| 610 | self.data.update(dataOut, tm) |
|
614 | self.data.update(dataOut, tm) | |
| 611 |
|
615 | |||
| 612 | if dataOut.finished is True: |
|
616 | if dataOut.finished is True: | |
| 613 | self.connections -= 1 |
|
617 | self.connections -= 1 | |
| 614 | if self.connections == 0 and dt in self.dates: |
|
618 | if self.connections == 0 and dt in self.dates: | |
| 615 | self.data.ended = True |
|
619 | self.data.ended = True | |
| 616 | self.send(self.data) |
|
620 | self.send(self.data) | |
| 617 | self.data.setup() |
|
621 | self.data.setup() | |
| 618 | else: |
|
622 | else: | |
| 619 | if self.realtime: |
|
623 | if self.realtime: | |
| 620 | self.send(self.data) |
|
624 | self.send(self.data) | |
| 621 | if self.web_address: |
|
625 | if self.web_address: | |
| 622 | self.sender_web.send(self.data.jsonify()) |
|
626 | self.sender_web.send(self.data.jsonify()) | |
| 623 | else: |
|
627 | else: | |
| 624 | self.sendData(self.send, self.data, coerce=coerce) |
|
628 | self.sendData(self.send, self.data, coerce=coerce) | |
| 625 | coerce = False |
|
629 | coerce = False | |
| 626 |
|
630 | |||
| 627 | return |
|
631 | return | |
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