@@ -0,0 +1,11 | |||||
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1 | ## ROADMAP | |||
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2 | ## SCHAIN BRANCHES | |||
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3 | ||||
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4 | ### BRANCH - SCHAIN_MP | |||
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5 | ||||
|
6 | * Revisar si funciona con varios publishers. | |||
|
7 | * Revisar xRange y reinicializaciΓ³n de grΓ‘fico. | |||
|
8 | * Grabar cada spectra independientemente. | |||
|
9 | * Agregar kwargs al init | |||
|
10 | * Agregar grΓ‘ficos restantes | |||
|
11 | * PresentaciΓ³n |
@@ -1,377 +1,377 | |||||
1 |
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1 | |||
2 | import os |
|
2 | import os | |
3 | import zmq |
|
3 | import zmq | |
4 | import time |
|
4 | import time | |
5 | import numpy |
|
5 | import numpy | |
6 | import datetime |
|
6 | import datetime | |
7 | import numpy as np |
|
7 | import numpy as np | |
8 | import matplotlib.pyplot as plt |
|
8 | import matplotlib.pyplot as plt | |
9 | from mpl_toolkits.axes_grid1 import make_axes_locatable |
|
9 | from mpl_toolkits.axes_grid1 import make_axes_locatable | |
10 | from matplotlib.ticker import FuncFormatter, LinearLocator |
|
10 | from matplotlib.ticker import FuncFormatter, LinearLocator | |
11 | from multiprocessing import Process |
|
11 | from multiprocessing import Process | |
12 |
|
12 | |||
13 | from schainpy.model.proc.jroproc_base import Operation |
|
13 | from schainpy.model.proc.jroproc_base import Operation | |
14 |
|
14 | |||
15 | #plt.ion() |
|
15 | #plt.ion() | |
16 |
|
16 | |||
17 | func = lambda x, pos: ('%s') %(datetime.datetime.utcfromtimestamp(x).strftime('%H:%M')) |
|
17 | func = lambda x, pos: ('%s') %(datetime.datetime.utcfromtimestamp(x).strftime('%H:%M')) | |
18 |
|
18 | |||
19 | d1970 = datetime.datetime(1970,1,1) |
|
19 | d1970 = datetime.datetime(1970,1,1) | |
20 |
|
20 | |||
21 | class PlotData(Operation, Process): |
|
21 | class PlotData(Operation, Process): | |
22 |
|
22 | |||
23 | CODE = 'Figure' |
|
23 | CODE = 'Figure' | |
24 | colormap = 'jet' |
|
24 | colormap = 'jet' | |
25 | __MAXNUMX = 80 |
|
25 | __MAXNUMX = 80 | |
26 | __MAXNUMY = 80 |
|
26 | __MAXNUMY = 80 | |
27 | __missing = 1E30 |
|
27 | __missing = 1E30 | |
28 |
|
28 | |||
29 | def __init__(self, **kwargs): |
|
29 | def __init__(self, **kwargs): | |
30 |
|
30 | |||
31 | Operation.__init__(self) |
|
31 | Operation.__init__(self) | |
32 | Process.__init__(self) |
|
32 | Process.__init__(self) | |
33 | self.mp = False |
|
33 | self.mp = False | |
34 | self.dataOut = None |
|
34 | self.dataOut = None | |
35 | self.isConfig = False |
|
35 | self.isConfig = False | |
36 | self.figure = None |
|
36 | self.figure = None | |
37 | self.axes = [] |
|
37 | self.axes = [] | |
38 | self.localtime = kwargs.pop('localtime', True) |
|
38 | self.localtime = kwargs.pop('localtime', True) | |
39 | self.show = kwargs.get('show', True) |
|
39 | self.show = kwargs.get('show', True) | |
40 | self.save = kwargs.get('save', False) |
|
40 | self.save = kwargs.get('save', False) | |
41 | self.colormap = kwargs.get('colormap', self.colormap) |
|
41 | self.colormap = kwargs.get('colormap', self.colormap) | |
42 | self.showprofile = kwargs.get('showprofile', False) |
|
42 | self.showprofile = kwargs.get('showprofile', False) | |
43 | self.title = kwargs.get('wintitle', '') |
|
43 | self.title = kwargs.get('wintitle', '') | |
44 | self.xaxis = kwargs.get('xaxis', 'time') |
|
44 | self.xaxis = kwargs.get('xaxis', 'time') | |
45 | self.zmin = kwargs.get('zmin', None) |
|
45 | self.zmin = kwargs.get('zmin', None) | |
46 | self.zmax = kwargs.get('zmax', None) |
|
46 | self.zmax = kwargs.get('zmax', None) | |
47 | self.xmin = kwargs.get('xmin', None) |
|
47 | self.xmin = kwargs.get('xmin', None) | |
48 | self.xmax = kwargs.get('xmax', None) |
|
48 | self.xmax = kwargs.get('xmax', None) | |
49 | self.xrange = kwargs.get('xrange', 24) |
|
49 | self.xrange = kwargs.get('xrange', 24) | |
50 | self.ymin = kwargs.get('ymin', None) |
|
50 | self.ymin = kwargs.get('ymin', None) | |
51 | self.ymax = kwargs.get('ymax', None) |
|
51 | self.ymax = kwargs.get('ymax', None) | |
52 |
|
52 | |||
53 | def fill_gaps(self, x_buffer, y_buffer, z_buffer): |
|
53 | def fill_gaps(self, x_buffer, y_buffer, z_buffer): | |
54 |
|
54 | |||
55 | if x_buffer.shape[0] < 2: |
|
55 | if x_buffer.shape[0] < 2: | |
56 | return x_buffer, y_buffer, z_buffer |
|
56 | return x_buffer, y_buffer, z_buffer | |
57 |
|
57 | |||
58 | deltas = x_buffer[1:] - x_buffer[0:-1] |
|
58 | deltas = x_buffer[1:] - x_buffer[0:-1] | |
59 | x_median = np.median(deltas) |
|
59 | x_median = np.median(deltas) | |
60 |
|
60 | |||
61 | index = np.where(deltas > 5*x_median) |
|
61 | index = np.where(deltas > 5*x_median) | |
62 |
|
62 | |||
63 | if len(index[0]) != 0: |
|
63 | if len(index[0]) != 0: | |
64 | z_buffer[::,index[0],::] = self.__missing |
|
64 | z_buffer[::,index[0],::] = self.__missing | |
65 | z_buffer = np.ma.masked_inside(z_buffer, |
|
65 | z_buffer = np.ma.masked_inside(z_buffer, | |
66 | 0.99*self.__missing, |
|
66 | 0.99*self.__missing, | |
67 | 1.01*self.__missing) |
|
67 | 1.01*self.__missing) | |
68 |
|
68 | |||
69 | return x_buffer, y_buffer, z_buffer |
|
69 | return x_buffer, y_buffer, z_buffer | |
70 |
|
70 | |||
71 | def decimate(self): |
|
71 | def decimate(self): | |
72 |
|
72 | |||
73 | dx = int(len(self.x)/self.__MAXNUMX) + 1 |
|
73 | dx = int(len(self.x)/self.__MAXNUMX) + 1 | |
74 | dy = int(len(self.y)/self.__MAXNUMY) + 1 |
|
74 | dy = int(len(self.y)/self.__MAXNUMY) + 1 | |
75 |
|
75 | |||
76 | x = self.x[::dx] |
|
76 | x = self.x[::dx] | |
77 | y = self.y[::dy] |
|
77 | y = self.y[::dy] | |
78 | z = self.z[::, ::dx, ::dy] |
|
78 | z = self.z[::, ::dx, ::dy] | |
79 |
|
79 | |||
80 | return x, y, z |
|
80 | return x, y, z | |
81 |
|
81 | |||
82 | def __plot(self): |
|
82 | def __plot(self): | |
83 |
|
83 | |||
84 | print 'plotting...{}'.format(self.CODE) |
|
84 | print 'plotting...{}'.format(self.CODE) | |
85 |
|
85 | |||
86 | self.plot() |
|
86 | self.plot() | |
87 | self.figure.suptitle('{} {} - Date:{}'.format(self.title, self.CODE.upper(), |
|
87 | self.figure.suptitle('{} {} - Date:{}'.format(self.title, self.CODE.upper(), | |
88 | datetime.datetime.utcfromtimestamp(self.max_time).strftime('%y/%m/%d %H:%M:%S'))) |
|
88 | datetime.datetime.utcfromtimestamp(self.max_time).strftime('%y/%m/%d %H:%M:%S'))) | |
89 |
|
89 | |||
90 | if self.save: |
|
90 | if self.save: | |
91 | figname = os.path.join(self.save, '{}_{}.png'.format(self.CODE, |
|
91 | figname = os.path.join(self.save, '{}_{}.png'.format(self.CODE, | |
92 | datetime.datetime.utcfromtimestamp(self.times[-1]).strftime('%y%m%d_%H%M%S'))) |
|
92 | datetime.datetime.utcfromtimestamp(self.times[-1]).strftime('%y%m%d_%H%M%S'))) | |
93 | print 'Saving figure: {}'.format(figname) |
|
93 | print 'Saving figure: {}'.format(figname) | |
94 | self.figure.savefig(figname) |
|
94 | self.figure.savefig(figname) | |
95 |
|
95 | |||
96 | self.figure.canvas.draw() |
|
96 | self.figure.canvas.draw() | |
97 |
|
97 | |||
98 | def plot(self): |
|
98 | def plot(self): | |
99 |
|
99 | |||
100 | print 'plotting...{}'.format(self.CODE.upper()) |
|
100 | print 'plotting...{}'.format(self.CODE.upper()) | |
101 | return |
|
101 | return | |
102 |
|
102 | |||
103 | def run(self): |
|
103 | def run(self): | |
104 |
|
104 | |||
105 | print '[Starting] {}'.format(self.name) |
|
105 | print '[Starting] {}'.format(self.name) | |
106 | context = zmq.Context() |
|
106 | context = zmq.Context() | |
107 | receiver = context.socket(zmq.SUB) |
|
107 | receiver = context.socket(zmq.SUB) | |
108 | receiver.setsockopt(zmq.SUBSCRIBE, '') |
|
108 | receiver.setsockopt(zmq.SUBSCRIBE, '') | |
109 | receiver.setsockopt(zmq.CONFLATE, True) |
|
109 | receiver.setsockopt(zmq.CONFLATE, True) | |
110 | receiver.connect("ipc:///tmp/zmq.plots") |
|
110 | receiver.connect("ipc:///tmp/zmq.plots") | |
111 |
|
111 | |||
112 | while True: |
|
112 | while True: | |
113 | try: |
|
113 | try: | |
114 | #if True: |
|
114 | #if True: | |
115 | self.data = receiver.recv_pyobj(flags=zmq.NOBLOCK) |
|
115 | self.data = receiver.recv_pyobj(flags=zmq.NOBLOCK) | |
116 | self.dataOut = self.data['dataOut'] |
|
116 | self.dataOut = self.data['dataOut'] | |
117 | self.times = self.data['times'] |
|
117 | self.times = self.data['times'] | |
118 | self.times.sort() |
|
118 | self.times.sort() | |
119 | self.min_time = self.times[0] |
|
119 | self.min_time = self.times[0] | |
120 | self.max_time = self.times[-1] |
|
120 | self.max_time = self.times[-1] | |
121 |
|
121 | |||
122 | if self.isConfig is False: |
|
122 | if self.isConfig is False: | |
123 | self.setup() |
|
123 | self.setup() | |
124 | self.isConfig = True |
|
124 | self.isConfig = True | |
125 |
|
125 | |||
126 | self.__plot() |
|
126 | self.__plot() | |
127 |
|
127 | |||
128 | if 'ENDED' in self.data: |
|
128 | if 'ENDED' in self.data: | |
129 | #self.setup() |
|
129 | # self.setup() | |
130 | #self.__plot() |
|
130 | # self.__plot() | |
131 | pass |
|
131 | pass | |
132 |
|
132 | |||
133 | except zmq.Again as e: |
|
133 | except zmq.Again as e: | |
134 | print 'Waiting for data...' |
|
134 | print 'Waiting for data...' | |
135 | plt.pause(5) |
|
135 | plt.pause(5) | |
136 | #time.sleep(3) |
|
136 | #time.sleep(3) | |
137 |
|
137 | |||
138 | def close(self): |
|
138 | def close(self): | |
139 | if self.dataOut: |
|
139 | if self.dataOut: | |
140 | self._plot() |
|
140 | self._plot() | |
141 |
|
141 | |||
142 |
|
142 | |||
143 | class PlotSpectraData(PlotData): |
|
143 | class PlotSpectraData(PlotData): | |
144 |
|
144 | |||
145 | CODE = 'spc' |
|
145 | CODE = 'spc' | |
146 | colormap = 'jro' |
|
146 | colormap = 'jro' | |
147 |
|
147 | |||
148 | def setup(self): |
|
148 | def setup(self): | |
149 |
|
149 | |||
150 | ncolspan = 1 |
|
150 | ncolspan = 1 | |
151 | colspan = 1 |
|
151 | colspan = 1 | |
152 | self.ncols = int(numpy.sqrt(self.dataOut.nChannels)+0.9) |
|
152 | self.ncols = int(numpy.sqrt(self.dataOut.nChannels)+0.9) | |
153 | self.nrows = int(self.dataOut.nChannels*1./self.ncols + 0.9) |
|
153 | self.nrows = int(self.dataOut.nChannels*1./self.ncols + 0.9) | |
154 | self.width = 3.6*self.ncols |
|
154 | self.width = 3.6*self.ncols | |
155 | self.height = 3.2*self.nrows |
|
155 | self.height = 3.2*self.nrows | |
156 | if self.showprofile: |
|
156 | if self.showprofile: | |
157 | ncolspan = 3 |
|
157 | ncolspan = 3 | |
158 | colspan = 2 |
|
158 | colspan = 2 | |
159 | self.width += 1.2*self.ncols |
|
159 | self.width += 1.2*self.ncols | |
160 |
|
160 | |||
161 | self.ylabel = 'Range [Km]' |
|
161 | self.ylabel = 'Range [Km]' | |
162 | self.titles = ['Channel {}'.format(x) for x in self.dataOut.channelList] |
|
162 | self.titles = ['Channel {}'.format(x) for x in self.dataOut.channelList] | |
163 |
|
163 | |||
164 | if self.figure is None: |
|
164 | if self.figure is None: | |
165 | self.figure = plt.figure(figsize=(self.width, self.height), |
|
165 | self.figure = plt.figure(figsize=(self.width, self.height), | |
166 | edgecolor='k', |
|
166 | edgecolor='k', | |
167 | facecolor='w') |
|
167 | facecolor='w') | |
168 | else: |
|
168 | else: | |
169 | self.figure.clf() |
|
169 | self.figure.clf() | |
170 |
|
170 | |||
171 | n = 0 |
|
171 | n = 0 | |
172 | for y in range(self.nrows): |
|
172 | for y in range(self.nrows): | |
173 | for x in range(self.ncols): |
|
173 | for x in range(self.ncols): | |
174 | if n>=self.dataOut.nChannels: |
|
174 | if n>=self.dataOut.nChannels: | |
175 | break |
|
175 | break | |
176 | ax = plt.subplot2grid((self.nrows, self.ncols*ncolspan), (y, x*ncolspan), 1, colspan) |
|
176 | ax = plt.subplot2grid((self.nrows, self.ncols*ncolspan), (y, x*ncolspan), 1, colspan) | |
177 | if self.showprofile: |
|
177 | if self.showprofile: | |
178 | ax.ax_profile = plt.subplot2grid((self.nrows, self.ncols*ncolspan), (y, x*ncolspan+colspan), 1, 1) |
|
178 | ax.ax_profile = plt.subplot2grid((self.nrows, self.ncols*ncolspan), (y, x*ncolspan+colspan), 1, 1) | |
179 |
|
179 | |||
180 | ax.firsttime = True |
|
180 | ax.firsttime = True | |
181 | self.axes.append(ax) |
|
181 | self.axes.append(ax) | |
182 | n += 1 |
|
182 | n += 1 | |
183 |
|
183 | |||
184 | self.figure.subplots_adjust(wspace=0.9, hspace=0.5) |
|
184 | self.figure.subplots_adjust(wspace=0.9, hspace=0.5) | |
185 | self.figure.show() |
|
185 | self.figure.show() | |
186 |
|
186 | |||
187 | def plot(self): |
|
187 | def plot(self): | |
188 |
|
188 | |||
189 | if self.xaxis == "frequency": |
|
189 | if self.xaxis == "frequency": | |
190 | x = self.dataOut.getFreqRange(1)/1000. |
|
190 | x = self.dataOut.getFreqRange(1)/1000. | |
191 | xlabel = "Frequency (kHz)" |
|
191 | xlabel = "Frequency (kHz)" | |
192 | elif self.xaxis == "time": |
|
192 | elif self.xaxis == "time": | |
193 | x = self.dataOut.getAcfRange(1) |
|
193 | x = self.dataOut.getAcfRange(1) | |
194 | xlabel = "Time (ms)" |
|
194 | xlabel = "Time (ms)" | |
195 | else: |
|
195 | else: | |
196 | x = self.dataOut.getVelRange(1) |
|
196 | x = self.dataOut.getVelRange(1) | |
197 | xlabel = "Velocity (m/s)" |
|
197 | xlabel = "Velocity (m/s)" | |
198 |
|
198 | |||
199 | y = self.dataOut.getHeiRange() |
|
199 | y = self.dataOut.getHeiRange() | |
200 | z = self.data[self.CODE] |
|
200 | z = self.data[self.CODE] | |
201 |
|
201 | |||
202 | for n, ax in enumerate(self.axes): |
|
202 | for n, ax in enumerate(self.axes): | |
203 |
|
203 | |||
204 | if ax.firsttime: |
|
204 | if ax.firsttime: | |
205 | self.xmax = self.xmax if self.xmax else np.nanmax(x) |
|
205 | self.xmax = self.xmax if self.xmax else np.nanmax(x) | |
206 | self.xmin = self.xmin if self.xmin else -self.xmax |
|
206 | self.xmin = self.xmin if self.xmin else -self.xmax | |
207 | self.ymin = self.ymin if self.ymin else np.nanmin(y) |
|
207 | self.ymin = self.ymin if self.ymin else np.nanmin(y) | |
208 | self.ymax = self.ymax if self.ymax else np.nanmax(y) |
|
208 | self.ymax = self.ymax if self.ymax else np.nanmax(y) | |
209 | self.zmin = self.zmin if self.zmin else np.nanmin(z) |
|
209 | self.zmin = self.zmin if self.zmin else np.nanmin(z) | |
210 | self.zmax = self.zmax if self.zmax else np.nanmax(z) |
|
210 | self.zmax = self.zmax if self.zmax else np.nanmax(z) | |
211 | ax.plot = ax.pcolormesh(x, y, z[n].T, |
|
211 | ax.plot = ax.pcolormesh(x, y, z[n].T, | |
212 | vmin=self.zmin, |
|
212 | vmin=self.zmin, | |
213 | vmax=self.zmax, |
|
213 | vmax=self.zmax, | |
214 | cmap=plt.get_cmap(self.colormap) |
|
214 | cmap=plt.get_cmap(self.colormap) | |
215 | ) |
|
215 | ) | |
216 | divider = make_axes_locatable(ax) |
|
216 | divider = make_axes_locatable(ax) | |
217 | cax = divider.new_horizontal(size='3%', pad=0.05) |
|
217 | cax = divider.new_horizontal(size='3%', pad=0.05) | |
218 | self.figure.add_axes(cax) |
|
218 | self.figure.add_axes(cax) | |
219 | plt.colorbar(ax.plot, cax) |
|
219 | plt.colorbar(ax.plot, cax) | |
220 |
|
220 | |||
221 | ax.set_xlim(self.xmin, self.xmax) |
|
221 | ax.set_xlim(self.xmin, self.xmax) | |
222 | ax.set_ylim(self.ymin, self.ymax) |
|
222 | ax.set_ylim(self.ymin, self.ymax) | |
223 |
|
223 | |||
224 | ax.xaxis.set_major_locator(LinearLocator(5)) |
|
224 | ax.xaxis.set_major_locator(LinearLocator(5)) | |
225 | #ax.yaxis.set_major_locator(LinearLocator(4)) |
|
225 | #ax.yaxis.set_major_locator(LinearLocator(4)) | |
226 |
|
226 | |||
227 | ax.set_ylabel(self.ylabel) |
|
227 | ax.set_ylabel(self.ylabel) | |
228 | ax.set_xlabel(xlabel) |
|
228 | ax.set_xlabel(xlabel) | |
229 |
|
229 | |||
230 | ax.firsttime = False |
|
230 | ax.firsttime = False | |
231 |
|
231 | |||
232 | if self.showprofile: |
|
232 | if self.showprofile: | |
233 | ax.plot_profile= ax.ax_profile.plot(self.data['rti'][self.max_time][n], y)[0] |
|
233 | ax.plot_profile= ax.ax_profile.plot(self.data['rti'][self.max_time][n], y)[0] | |
234 | ax.ax_profile.set_xlim(self.zmin, self.zmax) |
|
234 | ax.ax_profile.set_xlim(self.zmin, self.zmax) | |
235 | ax.ax_profile.set_ylim(self.ymin, self.ymax) |
|
235 | ax.ax_profile.set_ylim(self.ymin, self.ymax) | |
236 | ax.ax_profile.set_xlabel('dB') |
|
236 | ax.ax_profile.set_xlabel('dB') | |
237 | ax.ax_profile.grid(b=True, axis='x') |
|
237 | ax.ax_profile.grid(b=True, axis='x') | |
238 | ax.plot_noise = ax.ax_profile.plot(numpy.repeat(self.data['noise'][self.max_time][n], len(y)), y, |
|
238 | ax.plot_noise = ax.ax_profile.plot(numpy.repeat(self.data['noise'][self.max_time][n], len(y)), y, | |
239 | color="k", linestyle="dashed", lw=2)[0] |
|
239 | color="k", linestyle="dashed", lw=2)[0] | |
240 | [tick.set_visible(False) for tick in ax.ax_profile.get_yticklabels()] |
|
240 | [tick.set_visible(False) for tick in ax.ax_profile.get_yticklabels()] | |
241 | else: |
|
241 | else: | |
242 | ax.plot.set_array(z[n].T.ravel()) |
|
242 | ax.plot.set_array(z[n].T.ravel()) | |
243 | if self.showprofile: |
|
243 | if self.showprofile: | |
244 | ax.plot_profile.set_data(self.data['rti'][self.max_time][n], y) |
|
244 | ax.plot_profile.set_data(self.data['rti'][self.max_time][n], y) | |
245 | ax.plot_noise.set_data(numpy.repeat(self.data['noise'][self.max_time][n], len(y)), y) |
|
245 | ax.plot_noise.set_data(numpy.repeat(self.data['noise'][self.max_time][n], len(y)), y) | |
246 |
|
246 | |||
247 | ax.set_title('{} - Noise: {:.2f} dB'.format(self.titles[n], self.data['noise'][self.max_time][n]), |
|
247 | ax.set_title('{} - Noise: {:.2f} dB'.format(self.titles[n], self.data['noise'][self.max_time][n]), | |
248 | size=8) |
|
248 | size=8) | |
249 |
|
249 | |||
250 | class PlotRTIData(PlotData): |
|
250 | class PlotRTIData(PlotData): | |
251 |
|
251 | |||
252 | CODE = 'rti' |
|
252 | CODE = 'rti' | |
253 | colormap = 'jro' |
|
253 | colormap = 'jro' | |
254 |
|
254 | |||
255 | def setup(self): |
|
255 | def setup(self): | |
256 |
|
256 | |||
257 | self.ncols = 1 |
|
257 | self.ncols = 1 | |
258 | self.nrows = self.dataOut.nChannels |
|
258 | self.nrows = self.dataOut.nChannels | |
259 | self.width = 10 |
|
259 | self.width = 10 | |
260 | self.height = 2.2*self.nrows |
|
260 | self.height = 2.2*self.nrows | |
261 | self.ylabel = 'Range [Km]' |
|
261 | self.ylabel = 'Range [Km]' | |
262 | self.titles = ['Channel {}'.format(x) for x in self.dataOut.channelList] |
|
262 | self.titles = ['Channel {}'.format(x) for x in self.dataOut.channelList] | |
263 |
|
263 | |||
264 | if self.figure is None: |
|
264 | if self.figure is None: | |
265 | self.figure = plt.figure(figsize=(self.width, self.height), |
|
265 | self.figure = plt.figure(figsize=(self.width, self.height), | |
266 | edgecolor='k', |
|
266 | edgecolor='k', | |
267 | facecolor='w') |
|
267 | facecolor='w') | |
268 | else: |
|
268 | else: | |
269 | self.figure.clf() |
|
269 | self.figure.clf() | |
270 |
|
270 | |||
271 | for n in range(self.nrows): |
|
271 | for n in range(self.nrows): | |
272 | ax = self.figure.add_subplot(self.nrows, self.ncols, n+1) |
|
272 | ax = self.figure.add_subplot(self.nrows, self.ncols, n+1) | |
273 | ax.firsttime = True |
|
273 | ax.firsttime = True | |
274 | self.axes.append(ax) |
|
274 | self.axes.append(ax) | |
275 |
|
275 | |||
276 | self.figure.subplots_adjust(hspace=0.5) |
|
276 | self.figure.subplots_adjust(hspace=0.5) | |
277 | self.figure.show() |
|
277 | self.figure.show() | |
278 |
|
278 | |||
279 | def plot(self): |
|
279 | def plot(self): | |
280 |
|
280 | |||
281 | self.x = np.array(self.times) |
|
281 | self.x = np.array(self.times) | |
282 | self.y = self.dataOut.getHeiRange() |
|
282 | self.y = self.dataOut.getHeiRange() | |
283 | self.z = [] |
|
283 | self.z = [] | |
284 |
|
284 | |||
285 | for ch in range(self.nrows): |
|
285 | for ch in range(self.nrows): | |
286 | self.z.append([self.data[self.CODE][t][ch] for t in self.times]) |
|
286 | self.z.append([self.data[self.CODE][t][ch] for t in self.times]) | |
287 |
|
287 | |||
288 | self.z = np.array(self.z) |
|
288 | self.z = np.array(self.z) | |
289 |
|
289 | |||
290 | for n, ax in enumerate(self.axes): |
|
290 | for n, ax in enumerate(self.axes): | |
291 |
|
291 | |||
292 | x, y, z = self.fill_gaps(*self.decimate()) |
|
292 | x, y, z = self.fill_gaps(*self.decimate()) | |
293 |
|
293 | |||
294 | if ax.firsttime: |
|
294 | if ax.firsttime: | |
295 | self.ymin = self.ymin if self.ymin else np.nanmin(self.y) |
|
295 | self.ymin = self.ymin if self.ymin else np.nanmin(self.y) | |
296 | self.ymax = self.ymax if self.ymax else np.nanmax(self.y) |
|
296 | self.ymax = self.ymax if self.ymax else np.nanmax(self.y) | |
297 | self.zmin = self.zmin if self.zmin else np.nanmin(self.z) |
|
297 | self.zmin = self.zmin if self.zmin else np.nanmin(self.z) | |
298 | zmax = self.zmax if self.zmax else np.nanmax(self.z) |
|
298 | zmax = self.zmax if self.zmax else np.nanmax(self.z) | |
299 | plot = ax.pcolormesh(x, y, z[n].T, |
|
299 | plot = ax.pcolormesh(x, y, z[n].T, | |
300 | vmin=self.zmin, |
|
300 | vmin=self.zmin, | |
301 | vmax=self.zmax, |
|
301 | vmax=self.zmax, | |
302 | cmap=plt.get_cmap(self.colormap) |
|
302 | cmap=plt.get_cmap(self.colormap) | |
303 | ) |
|
303 | ) | |
304 | divider = make_axes_locatable(ax) |
|
304 | divider = make_axes_locatable(ax) | |
305 | cax = divider.new_horizontal(size='2%', pad=0.05) |
|
305 | cax = divider.new_horizontal(size='2%', pad=0.05) | |
306 | self.figure.add_axes(cax) |
|
306 | self.figure.add_axes(cax) | |
307 | plt.colorbar(plot, cax) |
|
307 | plt.colorbar(plot, cax) | |
308 | ax.set_ylim(self.ymin, self.ymax) |
|
308 | ax.set_ylim(self.ymin, self.ymax) | |
309 | if self.xaxis=='time': |
|
309 | if self.xaxis=='time': | |
310 | ax.xaxis.set_major_formatter(FuncFormatter(func)) |
|
310 | ax.xaxis.set_major_formatter(FuncFormatter(func)) | |
311 | ax.xaxis.set_major_locator(LinearLocator(6)) |
|
311 | ax.xaxis.set_major_locator(LinearLocator(6)) | |
312 |
|
312 | |||
313 | ax.yaxis.set_major_locator(LinearLocator(4)) |
|
313 | ax.yaxis.set_major_locator(LinearLocator(4)) | |
314 |
|
314 | |||
315 | ax.set_ylabel(self.ylabel) |
|
315 | ax.set_ylabel(self.ylabel) | |
316 |
|
316 | |||
317 | if self.xmin is None: |
|
317 | if self.xmin is None: | |
318 | print 'is none' |
|
318 | print 'is none' | |
319 | xmin = self.min_time |
|
319 | xmin = self.min_time | |
320 | else: |
|
320 | else: | |
321 |
|
321 | |||
322 | xmin = (datetime.datetime.combine(self.dataOut.datatime.date(), |
|
322 | xmin = (datetime.datetime.combine(self.dataOut.datatime.date(), | |
323 | datetime.time(self.xmin, 0, 0))-d1970).total_seconds() |
|
323 | datetime.time(self.xmin, 0, 0))-d1970).total_seconds() | |
324 |
|
324 | |||
325 | xmax = xmin+self.xrange*60*60 |
|
325 | xmax = xmin+self.xrange*60*60 | |
326 |
|
326 | |||
327 | ax.set_xlim(xmin, xmax) |
|
327 | ax.set_xlim(xmin, xmax) | |
328 | ax.firsttime = False |
|
328 | ax.firsttime = False | |
329 | else: |
|
329 | else: | |
330 | ax.collections.remove(ax.collections[0]) |
|
330 | ax.collections.remove(ax.collections[0]) | |
331 | plot = ax.pcolormesh(x, y, z[n].T, |
|
331 | plot = ax.pcolormesh(x, y, z[n].T, | |
332 | vmin=self.zmin, |
|
332 | vmin=self.zmin, | |
333 | vmax=self.zmax, |
|
333 | vmax=self.zmax, | |
334 | cmap=plt.get_cmap(self.colormap) |
|
334 | cmap=plt.get_cmap(self.colormap) | |
335 | ) |
|
335 | ) | |
336 | ax.set_title('{} {}'.format(self.titles[n], |
|
336 | ax.set_title('{} {}'.format(self.titles[n], | |
337 | datetime.datetime.utcfromtimestamp(self.max_time).strftime('%y/%m/%d %H:%M:%S')), |
|
337 | datetime.datetime.utcfromtimestamp(self.max_time).strftime('%y/%m/%d %H:%M:%S')), | |
338 | size=8) |
|
338 | size=8) | |
339 |
|
339 | |||
340 |
|
340 | |||
341 | class PlotCOHData(PlotRTIData): |
|
341 | class PlotCOHData(PlotRTIData): | |
342 |
|
342 | |||
343 | CODE = 'coh' |
|
343 | CODE = 'coh' | |
344 |
|
344 | |||
345 | def setup(self): |
|
345 | def setup(self): | |
346 |
|
346 | |||
347 | self.ncols = 1 |
|
347 | self.ncols = 1 | |
348 | self.nrows = self.dataOut.nPairs |
|
348 | self.nrows = self.dataOut.nPairs | |
349 | self.width = 10 |
|
349 | self.width = 10 | |
350 | self.height = 2.2*self.nrows |
|
350 | self.height = 2.2*self.nrows | |
351 | self.ylabel = 'Range [Km]' |
|
351 | self.ylabel = 'Range [Km]' | |
352 | self.titles = ['Channels {}'.format(x) for x in self.dataOut.pairsList] |
|
352 | self.titles = ['Channels {}'.format(x) for x in self.dataOut.pairsList] | |
353 |
|
353 | |||
354 | if self.figure is None: |
|
354 | if self.figure is None: | |
355 | self.figure = plt.figure(figsize=(self.width, self.height), |
|
355 | self.figure = plt.figure(figsize=(self.width, self.height), | |
356 | edgecolor='k', |
|
356 | edgecolor='k', | |
357 | facecolor='w') |
|
357 | facecolor='w') | |
358 | else: |
|
358 | else: | |
359 | self.figure.clf() |
|
359 | self.figure.clf() | |
360 |
|
360 | |||
361 | for n in range(self.nrows): |
|
361 | for n in range(self.nrows): | |
362 | ax = self.figure.add_subplot(self.nrows, self.ncols, n+1) |
|
362 | ax = self.figure.add_subplot(self.nrows, self.ncols, n+1) | |
363 | ax.firsttime = True |
|
363 | ax.firsttime = True | |
364 | self.axes.append(ax) |
|
364 | self.axes.append(ax) | |
365 |
|
365 | |||
366 | self.figure.subplots_adjust(hspace=0.5) |
|
366 | self.figure.subplots_adjust(hspace=0.5) | |
367 | self.figure.show() |
|
367 | self.figure.show() | |
368 |
|
368 | |||
369 | class PlotSNRData(PlotRTIData): |
|
369 | class PlotSNRData(PlotRTIData): | |
370 |
|
370 | |||
371 | CODE = 'coh' |
|
371 | CODE = 'coh' | |
372 |
|
372 | |||
373 |
|
373 | |||
374 | class PlotPHASEData(PlotCOHData): |
|
374 | class PlotPHASEData(PlotCOHData): | |
375 |
|
375 | |||
376 | CODE = 'phase' |
|
376 | CODE = 'phase' | |
377 | colormap = 'seismic' |
|
377 | colormap = 'seismic' |
@@ -1,299 +1,301 | |||||
1 | ''' |
|
1 | ''' | |
2 |
|
2 | |||
3 | $Author: murco $ |
|
3 | $Author: murco $ | |
4 | $Id: jroproc_base.py 1 2012-11-12 18:56:07Z murco $ |
|
4 | $Id: jroproc_base.py 1 2012-11-12 18:56:07Z murco $ | |
5 | ''' |
|
5 | ''' | |
6 |
|
6 | |||
7 | class ProcessingUnit(object): |
|
7 | class ProcessingUnit(object): | |
8 |
|
8 | |||
9 | """ |
|
9 | """ | |
10 | Esta es la clase base para el procesamiento de datos. |
|
10 | Esta es la clase base para el procesamiento de datos. | |
11 |
|
11 | |||
12 | Contiene el metodo "call" para llamar operaciones. Las operaciones pueden ser: |
|
12 | Contiene el metodo "call" para llamar operaciones. Las operaciones pueden ser: | |
13 | - Metodos internos (callMethod) |
|
13 | - Metodos internos (callMethod) | |
14 | - Objetos del tipo Operation (callObject). Antes de ser llamados, estos objetos |
|
14 | - Objetos del tipo Operation (callObject). Antes de ser llamados, estos objetos | |
15 | tienen que ser agreagados con el metodo "add". |
|
15 | tienen que ser agreagados con el metodo "add". | |
16 |
|
16 | |||
17 | """ |
|
17 | """ | |
18 | # objeto de datos de entrada (Voltage, Spectra o Correlation) |
|
18 | # objeto de datos de entrada (Voltage, Spectra o Correlation) | |
19 | dataIn = None |
|
19 | dataIn = None | |
20 | dataInList = [] |
|
20 | dataInList = [] | |
21 |
|
21 | |||
22 | # objeto de datos de entrada (Voltage, Spectra o Correlation) |
|
22 | # objeto de datos de entrada (Voltage, Spectra o Correlation) | |
23 | dataOut = None |
|
23 | dataOut = None | |
24 |
|
24 | |||
25 | operations2RunDict = None |
|
25 | operations2RunDict = None | |
26 |
|
26 | |||
27 | isConfig = False |
|
27 | isConfig = False | |
28 |
|
28 | |||
29 |
|
29 | |||
30 | def __init__(self, *args, **kwargs): |
|
30 | def __init__(self, *args, **kwargs): | |
31 |
|
31 | |||
32 | self.dataIn = None |
|
32 | self.dataIn = None | |
33 | self.dataInList = [] |
|
33 | self.dataInList = [] | |
34 |
|
34 | |||
35 | self.dataOut = None |
|
35 | self.dataOut = None | |
36 |
|
36 | |||
37 | self.operations2RunDict = {} |
|
37 | self.operations2RunDict = {} | |
38 |
|
38 | |||
39 | self.isConfig = False |
|
39 | self.isConfig = False | |
40 |
|
40 | |||
41 | self.args = args |
|
41 | self.args = args | |
|
42 | # if (kwargs): | |||
|
43 | # self.kwargs = kwargs | |||
42 | self.kwargs = kwargs |
|
44 | self.kwargs = kwargs | |
43 |
|
45 | |||
44 | def addOperation(self, opObj, objId): |
|
46 | def addOperation(self, opObj, objId): | |
45 |
|
47 | |||
46 | """ |
|
48 | """ | |
47 | Agrega un objeto del tipo "Operation" (opObj) a la lista de objetos "self.objectList" y retorna el |
|
49 | Agrega un objeto del tipo "Operation" (opObj) a la lista de objetos "self.objectList" y retorna el | |
48 | identificador asociado a este objeto. |
|
50 | identificador asociado a este objeto. | |
49 |
|
51 | |||
50 | Input: |
|
52 | Input: | |
51 |
|
53 | |||
52 | object : objeto de la clase "Operation" |
|
54 | object : objeto de la clase "Operation" | |
53 |
|
55 | |||
54 | Return: |
|
56 | Return: | |
55 |
|
57 | |||
56 | objId : identificador del objeto, necesario para ejecutar la operacion |
|
58 | objId : identificador del objeto, necesario para ejecutar la operacion | |
57 | """ |
|
59 | """ | |
58 |
|
60 | |||
59 | self.operations2RunDict[objId] = opObj |
|
61 | self.operations2RunDict[objId] = opObj | |
60 |
|
62 | |||
61 | return objId |
|
63 | return objId | |
62 |
|
64 | |||
63 | def getOperationObj(self, objId): |
|
65 | def getOperationObj(self, objId): | |
64 |
|
66 | |||
65 | if objId not in self.operations2RunDict.keys(): |
|
67 | if objId not in self.operations2RunDict.keys(): | |
66 | return None |
|
68 | return None | |
67 |
|
69 | |||
68 | return self.operations2RunDict[objId] |
|
70 | return self.operations2RunDict[objId] | |
69 |
|
71 | |||
70 | def operation(self, **kwargs): |
|
72 | def operation(self, **kwargs): | |
71 |
|
73 | |||
72 | """ |
|
74 | """ | |
73 | Operacion directa sobre la data (dataOut.data). Es necesario actualizar los valores de los |
|
75 | Operacion directa sobre la data (dataOut.data). Es necesario actualizar los valores de los | |
74 | atributos del objeto dataOut |
|
76 | atributos del objeto dataOut | |
75 |
|
77 | |||
76 | Input: |
|
78 | Input: | |
77 |
|
79 | |||
78 | **kwargs : Diccionario de argumentos de la funcion a ejecutar |
|
80 | **kwargs : Diccionario de argumentos de la funcion a ejecutar | |
79 | """ |
|
81 | """ | |
80 |
|
82 | |||
81 | raise NotImplementedError |
|
83 | raise NotImplementedError | |
82 |
|
84 | |||
83 | def callMethod(self, name, **kwargs): |
|
85 | def callMethod(self, name, **kwargs): | |
84 |
|
86 | |||
85 | """ |
|
87 | """ | |
86 | Ejecuta el metodo con el nombre "name" y con argumentos **kwargs de la propia clase. |
|
88 | Ejecuta el metodo con el nombre "name" y con argumentos **kwargs de la propia clase. | |
87 |
|
89 | |||
88 | Input: |
|
90 | Input: | |
89 | name : nombre del metodo a ejecutar |
|
91 | name : nombre del metodo a ejecutar | |
90 |
|
92 | |||
91 | **kwargs : diccionario con los nombres y valores de la funcion a ejecutar. |
|
93 | **kwargs : diccionario con los nombres y valores de la funcion a ejecutar. | |
92 |
|
94 | |||
93 | """ |
|
95 | """ | |
94 |
|
96 | |||
95 | #Checking the inputs |
|
97 | #Checking the inputs | |
96 | if name == 'run': |
|
98 | if name == 'run': | |
97 |
|
99 | |||
98 | if not self.checkInputs(): |
|
100 | if not self.checkInputs(): | |
99 | self.dataOut.flagNoData = True |
|
101 | self.dataOut.flagNoData = True | |
100 | return False |
|
102 | return False | |
101 | else: |
|
103 | else: | |
102 | #Si no es un metodo RUN la entrada es la misma dataOut (interna) |
|
104 | #Si no es un metodo RUN la entrada es la misma dataOut (interna) | |
103 | if self.dataOut.isEmpty(): |
|
105 | if self.dataOut.isEmpty(): | |
104 | return False |
|
106 | return False | |
105 |
|
107 | |||
106 | #Getting the pointer to method |
|
108 | #Getting the pointer to method | |
107 | methodToCall = getattr(self, name) |
|
109 | methodToCall = getattr(self, name) | |
108 |
|
110 | |||
109 | #Executing the self method |
|
111 | #Executing the self method | |
110 |
|
112 | |||
111 | if hasattr(self, 'mp'): |
|
113 | if hasattr(self, 'mp'): | |
112 | if self.mp is False: |
|
114 | if self.mp is False: | |
113 | self.mp = True |
|
115 | self.mp = True | |
114 | self.start() |
|
116 | self.start() | |
115 | else: |
|
117 | else: | |
116 | methodToCall(**kwargs) |
|
118 | methodToCall(**kwargs) | |
117 |
|
119 | |||
118 | if self.dataOut is None: |
|
120 | if self.dataOut is None: | |
119 | return False |
|
121 | return False | |
120 |
|
122 | |||
121 | if self.dataOut.isEmpty(): |
|
123 | if self.dataOut.isEmpty(): | |
122 | return False |
|
124 | return False | |
123 |
|
125 | |||
124 | return True |
|
126 | return True | |
125 |
|
127 | |||
126 | def callObject(self, objId): |
|
128 | def callObject(self, objId): | |
127 |
|
129 | |||
128 | """ |
|
130 | """ | |
129 | Ejecuta la operacion asociada al identificador del objeto "objId" |
|
131 | Ejecuta la operacion asociada al identificador del objeto "objId" | |
130 |
|
132 | |||
131 | Input: |
|
133 | Input: | |
132 |
|
134 | |||
133 | objId : identificador del objeto a ejecutar |
|
135 | objId : identificador del objeto a ejecutar | |
134 |
|
136 | |||
135 | **kwargs : diccionario con los nombres y valores de la funcion a ejecutar. |
|
137 | **kwargs : diccionario con los nombres y valores de la funcion a ejecutar. | |
136 |
|
138 | |||
137 | Return: |
|
139 | Return: | |
138 |
|
140 | |||
139 | None |
|
141 | None | |
140 | """ |
|
142 | """ | |
141 |
|
143 | |||
142 | if self.dataOut is not None and self.dataOut.isEmpty(): |
|
144 | if self.dataOut is not None and self.dataOut.isEmpty(): | |
143 | return False |
|
145 | return False | |
144 |
|
146 | |||
145 | externalProcObj = self.operations2RunDict[objId] |
|
147 | externalProcObj = self.operations2RunDict[objId] | |
146 |
|
148 | |||
147 | if hasattr(externalProcObj, 'mp'): |
|
149 | if hasattr(externalProcObj, 'mp'): | |
148 | if externalProcObj.mp is False: |
|
150 | if externalProcObj.mp is False: | |
149 | externalProcObj.mp = True |
|
151 | externalProcObj.mp = True | |
150 | externalProcObj.start() |
|
152 | externalProcObj.start() | |
151 | else: |
|
153 | else: | |
152 | externalProcObj.run(self.dataOut, **externalProcObj.kwargs) |
|
154 | externalProcObj.run(self.dataOut, **externalProcObj.kwargs) | |
153 |
|
155 | |||
154 | return True |
|
156 | return True | |
155 |
|
157 | |||
156 | def call(self, opType, opName=None, opId=None): |
|
158 | def call(self, opType, opName=None, opId=None): | |
157 |
|
159 | |||
158 | """ |
|
160 | """ | |
159 | Return True si ejecuta la operacion interna nombrada "opName" o la operacion externa |
|
161 | Return True si ejecuta la operacion interna nombrada "opName" o la operacion externa | |
160 | identificada con el id "opId"; con los argumentos "**kwargs". |
|
162 | identificada con el id "opId"; con los argumentos "**kwargs". | |
161 |
|
163 | |||
162 | False si la operacion no se ha ejecutado. |
|
164 | False si la operacion no se ha ejecutado. | |
163 |
|
165 | |||
164 | Input: |
|
166 | Input: | |
165 |
|
167 | |||
166 | opType : Puede ser "self" o "external" |
|
168 | opType : Puede ser "self" o "external" | |
167 |
|
169 | |||
168 | Depende del tipo de operacion para llamar a:callMethod or callObject: |
|
170 | Depende del tipo de operacion para llamar a:callMethod or callObject: | |
169 |
|
171 | |||
170 | 1. If opType = "self": Llama a un metodo propio de esta clase: |
|
172 | 1. If opType = "self": Llama a un metodo propio de esta clase: | |
171 |
|
173 | |||
172 | name_method = getattr(self, name) |
|
174 | name_method = getattr(self, name) | |
173 | name_method(**kwargs) |
|
175 | name_method(**kwargs) | |
174 |
|
176 | |||
175 |
|
177 | |||
176 | 2. If opType = "other" o"external": Llama al metodo "run()" de una instancia de la |
|
178 | 2. If opType = "other" o"external": Llama al metodo "run()" de una instancia de la | |
177 | clase "Operation" o de un derivado de ella: |
|
179 | clase "Operation" o de un derivado de ella: | |
178 |
|
180 | |||
179 | instanceName = self.operationList[opId] |
|
181 | instanceName = self.operationList[opId] | |
180 | instanceName.run(**kwargs) |
|
182 | instanceName.run(**kwargs) | |
181 |
|
183 | |||
182 | opName : Si la operacion es interna (opType = 'self'), entonces el "opName" sera |
|
184 | opName : Si la operacion es interna (opType = 'self'), entonces el "opName" sera | |
183 | usada para llamar a un metodo interno de la clase Processing |
|
185 | usada para llamar a un metodo interno de la clase Processing | |
184 |
|
186 | |||
185 | opId : Si la operacion es externa (opType = 'other' o 'external), entonces el |
|
187 | opId : Si la operacion es externa (opType = 'other' o 'external), entonces el | |
186 | "opId" sera usada para llamar al metodo "run" de la clase Operation |
|
188 | "opId" sera usada para llamar al metodo "run" de la clase Operation | |
187 | registrada anteriormente con ese Id |
|
189 | registrada anteriormente con ese Id | |
188 |
|
190 | |||
189 | Exception: |
|
191 | Exception: | |
190 | Este objeto de tipo Operation debe de haber sido agregado antes con el metodo: |
|
192 | Este objeto de tipo Operation debe de haber sido agregado antes con el metodo: | |
191 | "addOperation" e identificado con el valor "opId" = el id de la operacion. |
|
193 | "addOperation" e identificado con el valor "opId" = el id de la operacion. | |
192 | De lo contrario retornara un error del tipo ValueError |
|
194 | De lo contrario retornara un error del tipo ValueError | |
193 |
|
195 | |||
194 | """ |
|
196 | """ | |
195 |
|
197 | |||
196 | if opType == 'self': |
|
198 | if opType == 'self': | |
197 |
|
199 | |||
198 | if not opName: |
|
200 | if not opName: | |
199 | raise ValueError, "opName parameter should be defined" |
|
201 | raise ValueError, "opName parameter should be defined" | |
200 |
|
202 | |||
201 | sts = self.callMethod(opName, **self.kwargs) |
|
203 | sts = self.callMethod(opName, **self.kwargs) | |
202 |
|
204 | |||
203 | elif opType == 'other' or opType == 'external' or opType == 'plotter': |
|
205 | elif opType == 'other' or opType == 'external' or opType == 'plotter': | |
204 |
|
206 | |||
205 | if not opId: |
|
207 | if not opId: | |
206 | raise ValueError, "opId parameter should be defined" |
|
208 | raise ValueError, "opId parameter should be defined" | |
207 |
|
209 | |||
208 | if opId not in self.operations2RunDict.keys(): |
|
210 | if opId not in self.operations2RunDict.keys(): | |
209 | raise ValueError, "Any operation with id=%s has been added" %str(opId) |
|
211 | raise ValueError, "Any operation with id=%s has been added" %str(opId) | |
210 |
|
212 | |||
211 | sts = self.callObject(opId) |
|
213 | sts = self.callObject(opId) | |
212 |
|
214 | |||
213 | else: |
|
215 | else: | |
214 | raise ValueError, "opType should be 'self', 'external' or 'plotter'; and not '%s'" %opType |
|
216 | raise ValueError, "opType should be 'self', 'external' or 'plotter'; and not '%s'" %opType | |
215 |
|
217 | |||
216 | return sts |
|
218 | return sts | |
217 |
|
219 | |||
218 | def setInput(self, dataIn): |
|
220 | def setInput(self, dataIn): | |
219 |
|
221 | |||
220 | self.dataIn = dataIn |
|
222 | self.dataIn = dataIn | |
221 | self.dataInList.append(dataIn) |
|
223 | self.dataInList.append(dataIn) | |
222 |
|
224 | |||
223 | def getOutputObj(self): |
|
225 | def getOutputObj(self): | |
224 |
|
226 | |||
225 | return self.dataOut |
|
227 | return self.dataOut | |
226 |
|
228 | |||
227 | def checkInputs(self): |
|
229 | def checkInputs(self): | |
228 |
|
230 | |||
229 | for thisDataIn in self.dataInList: |
|
231 | for thisDataIn in self.dataInList: | |
230 |
|
232 | |||
231 | if thisDataIn.isEmpty(): |
|
233 | if thisDataIn.isEmpty(): | |
232 | return False |
|
234 | return False | |
233 |
|
235 | |||
234 | return True |
|
236 | return True | |
235 |
|
237 | |||
236 | def setup(self): |
|
238 | def setup(self): | |
237 |
|
239 | |||
238 | raise NotImplementedError |
|
240 | raise NotImplementedError | |
239 |
|
241 | |||
240 | def run(self): |
|
242 | def run(self): | |
241 |
|
243 | |||
242 | raise NotImplementedError |
|
244 | raise NotImplementedError | |
243 |
|
245 | |||
244 | def close(self): |
|
246 | def close(self): | |
245 | #Close every thread, queue or any other object here is it is neccesary. |
|
247 | #Close every thread, queue or any other object here is it is neccesary. | |
246 | return |
|
248 | return | |
247 |
|
249 | |||
248 | class Operation(object): |
|
250 | class Operation(object): | |
249 |
|
251 | |||
250 | """ |
|
252 | """ | |
251 | Clase base para definir las operaciones adicionales que se pueden agregar a la clase ProcessingUnit |
|
253 | Clase base para definir las operaciones adicionales que se pueden agregar a la clase ProcessingUnit | |
252 | y necesiten acumular informacion previa de los datos a procesar. De preferencia usar un buffer de |
|
254 | y necesiten acumular informacion previa de los datos a procesar. De preferencia usar un buffer de | |
253 | acumulacion dentro de esta clase |
|
255 | acumulacion dentro de esta clase | |
254 |
|
256 | |||
255 | Ejemplo: Integraciones coherentes, necesita la informacion previa de los n perfiles anteriores (bufffer) |
|
257 | Ejemplo: Integraciones coherentes, necesita la informacion previa de los n perfiles anteriores (bufffer) | |
256 |
|
258 | |||
257 | """ |
|
259 | """ | |
258 |
|
260 | |||
259 | __buffer = None |
|
261 | __buffer = None | |
260 | isConfig = False |
|
262 | isConfig = False | |
261 |
|
263 | |||
262 | def __init__(self, **kwargs): |
|
264 | def __init__(self, **kwargs): | |
263 |
|
265 | |||
264 | self.__buffer = None |
|
266 | self.__buffer = None | |
265 | self.isConfig = False |
|
267 | self.isConfig = False | |
266 | self.kwargs = kwargs |
|
268 | self.kwargs = kwargs | |
267 |
|
269 | |||
268 | def setup(self): |
|
270 | def setup(self): | |
269 |
|
271 | |||
270 | self.isConfig = True |
|
272 | self.isConfig = True | |
271 |
|
273 | |||
272 | raise NotImplementedError |
|
274 | raise NotImplementedError | |
273 |
|
275 | |||
274 | def run(self, dataIn, **kwargs): |
|
276 | def run(self, dataIn, **kwargs): | |
275 |
|
277 | |||
276 | """ |
|
278 | """ | |
277 | Realiza las operaciones necesarias sobre la dataIn.data y actualiza los |
|
279 | Realiza las operaciones necesarias sobre la dataIn.data y actualiza los | |
278 | atributos del objeto dataIn. |
|
280 | atributos del objeto dataIn. | |
279 |
|
281 | |||
280 | Input: |
|
282 | Input: | |
281 |
|
283 | |||
282 | dataIn : objeto del tipo JROData |
|
284 | dataIn : objeto del tipo JROData | |
283 |
|
285 | |||
284 | Return: |
|
286 | Return: | |
285 |
|
287 | |||
286 | None |
|
288 | None | |
287 |
|
289 | |||
288 | Affected: |
|
290 | Affected: | |
289 | __buffer : buffer de recepcion de datos. |
|
291 | __buffer : buffer de recepcion de datos. | |
290 |
|
292 | |||
291 | """ |
|
293 | """ | |
292 | if not self.isConfig: |
|
294 | if not self.isConfig: | |
293 | self.setup(**kwargs) |
|
295 | self.setup(**kwargs) | |
294 |
|
296 | |||
295 | raise NotImplementedError |
|
297 | raise NotImplementedError | |
296 |
|
298 | |||
297 | def close(self): |
|
299 | def close(self): | |
298 |
|
300 | |||
299 | pass |
|
301 | pass |
@@ -1,378 +1,378 | |||||
1 | ''' |
|
1 | ''' | |
2 | @author: Juan C. Espinoza |
|
2 | @author: Juan C. Espinoza | |
3 | ''' |
|
3 | ''' | |
4 |
|
4 | |||
5 | import time |
|
5 | import time | |
6 | import json |
|
6 | import json | |
7 | import numpy |
|
7 | import numpy | |
8 | import paho.mqtt.client as mqtt |
|
8 | import paho.mqtt.client as mqtt | |
9 | import zmq |
|
9 | import zmq | |
10 | import cPickle as pickle |
|
10 | import cPickle as pickle | |
11 | import datetime |
|
11 | import datetime | |
12 | from zmq.utils.monitor import recv_monitor_message |
|
12 | from zmq.utils.monitor import recv_monitor_message | |
13 | from functools import wraps |
|
13 | from functools import wraps | |
14 | from threading import Thread |
|
14 | from threading import Thread | |
15 | from multiprocessing import Process |
|
15 | from multiprocessing import Process | |
16 |
|
16 | |||
17 | from schainpy.model.proc.jroproc_base import Operation, ProcessingUnit |
|
17 | from schainpy.model.proc.jroproc_base import Operation, ProcessingUnit | |
18 |
|
18 | |||
19 | MAXNUMX = 100 |
|
19 | MAXNUMX = 100 | |
20 | MAXNUMY = 100 |
|
20 | MAXNUMY = 100 | |
21 | throttle_value = 5 |
|
21 | throttle_value = 5 | |
22 |
|
22 | |||
23 | class PrettyFloat(float): |
|
23 | class PrettyFloat(float): | |
24 | def __repr__(self): |
|
24 | def __repr__(self): | |
25 | return '%.2f' % self |
|
25 | return '%.2f' % self | |
26 |
|
26 | |||
27 | def roundFloats(obj): |
|
27 | def roundFloats(obj): | |
28 | if isinstance(obj, list): |
|
28 | if isinstance(obj, list): | |
29 | return map(roundFloats, obj) |
|
29 | return map(roundFloats, obj) | |
30 | elif isinstance(obj, float): |
|
30 | elif isinstance(obj, float): | |
31 | return round(obj, 2) |
|
31 | return round(obj, 2) | |
32 |
|
32 | |||
33 |
|
33 | |||
34 | class throttle(object): |
|
34 | class throttle(object): | |
35 | """Decorator that prevents a function from being called more than once every |
|
35 | """Decorator that prevents a function from being called more than once every | |
36 | time period. |
|
36 | time period. | |
37 | To create a function that cannot be called more than once a minute, but |
|
37 | To create a function that cannot be called more than once a minute, but | |
38 | will sleep until it can be called: |
|
38 | will sleep until it can be called: | |
39 | @throttle(minutes=1) |
|
39 | @throttle(minutes=1) | |
40 | def foo(): |
|
40 | def foo(): | |
41 | pass |
|
41 | pass | |
42 |
|
42 | |||
43 | for i in range(10): |
|
43 | for i in range(10): | |
44 | foo() |
|
44 | foo() | |
45 | print "This function has run %s times." % i |
|
45 | print "This function has run %s times." % i | |
46 | """ |
|
46 | """ | |
47 |
|
47 | |||
48 | def __init__(self, seconds=0, minutes=0, hours=0): |
|
48 | def __init__(self, seconds=0, minutes=0, hours=0): | |
49 | self.throttle_period = datetime.timedelta( |
|
49 | self.throttle_period = datetime.timedelta( | |
50 | seconds=seconds, minutes=minutes, hours=hours |
|
50 | seconds=seconds, minutes=minutes, hours=hours | |
51 | ) |
|
51 | ) | |
52 | self.time_of_last_call = datetime.datetime.min |
|
52 | self.time_of_last_call = datetime.datetime.min | |
53 |
|
53 | |||
54 | def __call__(self, fn): |
|
54 | def __call__(self, fn): | |
55 | @wraps(fn) |
|
55 | @wraps(fn) | |
56 | def wrapper(*args, **kwargs): |
|
56 | def wrapper(*args, **kwargs): | |
57 | now = datetime.datetime.now() |
|
57 | now = datetime.datetime.now() | |
58 | time_since_last_call = now - self.time_of_last_call |
|
58 | time_since_last_call = now - self.time_of_last_call | |
59 | time_left = self.throttle_period - time_since_last_call |
|
59 | time_left = self.throttle_period - time_since_last_call | |
60 |
|
60 | |||
61 | if time_left > datetime.timedelta(seconds=0): |
|
61 | if time_left > datetime.timedelta(seconds=0): | |
62 | return |
|
62 | return | |
63 |
|
63 | |||
64 | self.time_of_last_call = datetime.datetime.now() |
|
64 | self.time_of_last_call = datetime.datetime.now() | |
65 | return fn(*args, **kwargs) |
|
65 | return fn(*args, **kwargs) | |
66 |
|
66 | |||
67 | return wrapper |
|
67 | return wrapper | |
68 |
|
68 | |||
69 |
|
69 | |||
70 | class PublishData(Operation): |
|
70 | class PublishData(Operation): | |
71 | """Clase publish.""" |
|
71 | """Clase publish.""" | |
72 |
|
72 | |||
73 | def __init__(self, **kwargs): |
|
73 | def __init__(self, **kwargs): | |
74 | """Inicio.""" |
|
74 | """Inicio.""" | |
75 | Operation.__init__(self, **kwargs) |
|
75 | Operation.__init__(self, **kwargs) | |
76 | self.isConfig = False |
|
76 | self.isConfig = False | |
77 | self.client = None |
|
77 | self.client = None | |
78 | self.zeromq = None |
|
78 | self.zeromq = None | |
79 | self.mqtt = None |
|
79 | self.mqtt = None | |
80 |
|
80 | |||
81 | def on_disconnect(self, client, userdata, rc): |
|
81 | def on_disconnect(self, client, userdata, rc): | |
82 | if rc != 0: |
|
82 | if rc != 0: | |
83 | print("Unexpected disconnection.") |
|
83 | print("Unexpected disconnection.") | |
84 | self.connect() |
|
84 | self.connect() | |
85 |
|
85 | |||
86 | def connect(self): |
|
86 | def connect(self): | |
87 | print 'trying to connect' |
|
87 | print 'trying to connect' | |
88 | try: |
|
88 | try: | |
89 | self.client.connect( |
|
89 | self.client.connect( | |
90 | host=self.host, |
|
90 | host=self.host, | |
91 | port=self.port, |
|
91 | port=self.port, | |
92 | keepalive=60*10, |
|
92 | keepalive=60*10, | |
93 | bind_address='') |
|
93 | bind_address='') | |
94 | print "connected" |
|
94 | print "connected" | |
95 | self.client.loop_start() |
|
95 | self.client.loop_start() | |
96 | # self.client.publish( |
|
96 | # self.client.publish( | |
97 | # self.topic + 'SETUP', |
|
97 | # self.topic + 'SETUP', | |
98 | # json.dumps(setup), |
|
98 | # json.dumps(setup), | |
99 | # retain=True |
|
99 | # retain=True | |
100 | # ) |
|
100 | # ) | |
101 | except: |
|
101 | except: | |
102 | print "MQTT Conection error." |
|
102 | print "MQTT Conection error." | |
103 | self.client = False |
|
103 | self.client = False | |
104 |
|
104 | |||
105 | def setup(self, port=1883, username=None, password=None, clientId="user", zeromq=1, **kwargs): |
|
105 | def setup(self, port=1883, username=None, password=None, clientId="user", zeromq=1, **kwargs): | |
106 | self.counter = 0 |
|
106 | self.counter = 0 | |
107 | self.topic = kwargs.get('topic', 'schain') |
|
107 | self.topic = kwargs.get('topic', 'schain') | |
108 | self.delay = kwargs.get('delay', 0) |
|
108 | self.delay = kwargs.get('delay', 0) | |
109 | self.plottype = kwargs.get('plottype', 'spectra') |
|
109 | self.plottype = kwargs.get('plottype', 'spectra') | |
110 | self.host = kwargs.get('host', "10.10.10.82") |
|
110 | self.host = kwargs.get('host', "10.10.10.82") | |
111 | self.port = kwargs.get('port', 3000) |
|
111 | self.port = kwargs.get('port', 3000) | |
112 | self.clientId = clientId |
|
112 | self.clientId = clientId | |
113 | self.cnt = 0 |
|
113 | self.cnt = 0 | |
114 | self.zeromq = zeromq |
|
114 | self.zeromq = zeromq | |
115 | self.mqtt = kwargs.get('plottype', 0) |
|
115 | self.mqtt = kwargs.get('plottype', 0) | |
116 | self.client = None |
|
116 | self.client = None | |
117 | setup = [] |
|
117 | setup = [] | |
118 | if mqtt is 1: |
|
118 | if mqtt is 1: | |
119 | print 'mqqt es 1' |
|
119 | print 'mqqt es 1' | |
120 | self.client = mqtt.Client( |
|
120 | self.client = mqtt.Client( | |
121 | client_id=self.clientId + self.topic + 'SCHAIN', |
|
121 | client_id=self.clientId + self.topic + 'SCHAIN', | |
122 | clean_session=True) |
|
122 | clean_session=True) | |
123 | self.client.on_disconnect = self.on_disconnect |
|
123 | self.client.on_disconnect = self.on_disconnect | |
124 | self.connect() |
|
124 | self.connect() | |
125 | for plot in self.plottype: |
|
125 | for plot in self.plottype: | |
126 | setup.append({ |
|
126 | setup.append({ | |
127 | 'plot': plot, |
|
127 | 'plot': plot, | |
128 | 'topic': self.topic + plot, |
|
128 | 'topic': self.topic + plot, | |
129 | 'title': getattr(self, plot + '_' + 'title', False), |
|
129 | 'title': getattr(self, plot + '_' + 'title', False), | |
130 | 'xlabel': getattr(self, plot + '_' + 'xlabel', False), |
|
130 | 'xlabel': getattr(self, plot + '_' + 'xlabel', False), | |
131 | 'ylabel': getattr(self, plot + '_' + 'ylabel', False), |
|
131 | 'ylabel': getattr(self, plot + '_' + 'ylabel', False), | |
132 | 'xrange': getattr(self, plot + '_' + 'xrange', False), |
|
132 | 'xrange': getattr(self, plot + '_' + 'xrange', False), | |
133 | 'yrange': getattr(self, plot + '_' + 'yrange', False), |
|
133 | 'yrange': getattr(self, plot + '_' + 'yrange', False), | |
134 | 'zrange': getattr(self, plot + '_' + 'zrange', False), |
|
134 | 'zrange': getattr(self, plot + '_' + 'zrange', False), | |
135 | }) |
|
135 | }) | |
136 | if zeromq is 1: |
|
136 | if zeromq is 1: | |
137 | context = zmq.Context() |
|
137 | context = zmq.Context() | |
138 | self.zmq_socket = context.socket(zmq.PUSH) |
|
138 | self.zmq_socket = context.socket(zmq.PUSH) | |
139 | server = kwargs.get('server', 'zmq.pipe') |
|
139 | server = kwargs.get('server', 'zmq.pipe') | |
140 |
|
140 | |||
141 | if 'tcp://' in server: |
|
141 | if 'tcp://' in server: | |
142 | address = server |
|
142 | address = server | |
143 | else: |
|
143 | else: | |
144 | address = 'ipc:///tmp/%s' % server |
|
144 | address = 'ipc:///tmp/%s' % server | |
145 |
|
145 | |||
146 | self.zmq_socket.connect(address) |
|
146 | self.zmq_socket.connect(address) | |
147 | time.sleep(1) |
|
147 | time.sleep(1) | |
148 | print 'zeromq configured' |
|
148 | print 'zeromq configured' | |
149 |
|
149 | |||
150 |
|
150 | |||
151 | def publish_data(self): |
|
151 | def publish_data(self): | |
152 | self.dataOut.finished = False |
|
152 | self.dataOut.finished = False | |
153 | if self.mqtt is 1: |
|
153 | if self.mqtt is 1: | |
154 | yData = self.dataOut.heightList[:2].tolist() |
|
154 | yData = self.dataOut.heightList[:2].tolist() | |
155 | if self.plottype == 'spectra': |
|
155 | if self.plottype == 'spectra': | |
156 | data = getattr(self.dataOut, 'data_spc') |
|
156 | data = getattr(self.dataOut, 'data_spc') | |
157 | z = data/self.dataOut.normFactor |
|
157 | z = data/self.dataOut.normFactor | |
158 | zdB = 10*numpy.log10(z) |
|
158 | zdB = 10*numpy.log10(z) | |
159 | xlen, ylen = zdB[0].shape |
|
159 | xlen, ylen = zdB[0].shape | |
160 | dx = int(xlen/MAXNUMX) + 1 |
|
160 | dx = int(xlen/MAXNUMX) + 1 | |
161 | dy = int(ylen/MAXNUMY) + 1 |
|
161 | dy = int(ylen/MAXNUMY) + 1 | |
162 | Z = [0 for i in self.dataOut.channelList] |
|
162 | Z = [0 for i in self.dataOut.channelList] | |
163 | for i in self.dataOut.channelList: |
|
163 | for i in self.dataOut.channelList: | |
164 | Z[i] = zdB[i][::dx, ::dy].tolist() |
|
164 | Z[i] = zdB[i][::dx, ::dy].tolist() | |
165 | payload = { |
|
165 | payload = { | |
166 | 'timestamp': self.dataOut.utctime, |
|
166 | 'timestamp': self.dataOut.utctime, | |
167 | 'data': roundFloats(Z), |
|
167 | 'data': roundFloats(Z), | |
168 | 'channels': ['Ch %s' % ch for ch in self.dataOut.channelList], |
|
168 | 'channels': ['Ch %s' % ch for ch in self.dataOut.channelList], | |
169 | 'interval': self.dataOut.getTimeInterval(), |
|
169 | 'interval': self.dataOut.getTimeInterval(), | |
170 | 'type': self.plottype, |
|
170 | 'type': self.plottype, | |
171 | 'yData': yData |
|
171 | 'yData': yData | |
172 | } |
|
172 | } | |
173 | # print payload |
|
173 | # print payload | |
174 |
|
174 | |||
175 | elif self.plottype in ('rti', 'power'): |
|
175 | elif self.plottype in ('rti', 'power'): | |
176 | data = getattr(self.dataOut, 'data_spc') |
|
176 | data = getattr(self.dataOut, 'data_spc') | |
177 | z = data/self.dataOut.normFactor |
|
177 | z = data/self.dataOut.normFactor | |
178 | avg = numpy.average(z, axis=1) |
|
178 | avg = numpy.average(z, axis=1) | |
179 | avgdB = 10*numpy.log10(avg) |
|
179 | avgdB = 10*numpy.log10(avg) | |
180 | xlen, ylen = z[0].shape |
|
180 | xlen, ylen = z[0].shape | |
181 | dy = numpy.floor(ylen/self.__MAXNUMY) + 1 |
|
181 | dy = numpy.floor(ylen/self.__MAXNUMY) + 1 | |
182 | AVG = [0 for i in self.dataOut.channelList] |
|
182 | AVG = [0 for i in self.dataOut.channelList] | |
183 | for i in self.dataOut.channelList: |
|
183 | for i in self.dataOut.channelList: | |
184 | AVG[i] = avgdB[i][::dy].tolist() |
|
184 | AVG[i] = avgdB[i][::dy].tolist() | |
185 | payload = { |
|
185 | payload = { | |
186 | 'timestamp': self.dataOut.utctime, |
|
186 | 'timestamp': self.dataOut.utctime, | |
187 | 'data': roundFloats(AVG), |
|
187 | 'data': roundFloats(AVG), | |
188 | 'channels': ['Ch %s' % ch for ch in self.dataOut.channelList], |
|
188 | 'channels': ['Ch %s' % ch for ch in self.dataOut.channelList], | |
189 | 'interval': self.dataOut.getTimeInterval(), |
|
189 | 'interval': self.dataOut.getTimeInterval(), | |
190 | 'type': self.plottype, |
|
190 | 'type': self.plottype, | |
191 | 'yData': yData |
|
191 | 'yData': yData | |
192 | } |
|
192 | } | |
193 | elif self.plottype == 'noise': |
|
193 | elif self.plottype == 'noise': | |
194 | noise = self.dataOut.getNoise()/self.dataOut.normFactor |
|
194 | noise = self.dataOut.getNoise()/self.dataOut.normFactor | |
195 | noisedB = 10*numpy.log10(noise) |
|
195 | noisedB = 10*numpy.log10(noise) | |
196 | payload = { |
|
196 | payload = { | |
197 | 'timestamp': self.dataOut.utctime, |
|
197 | 'timestamp': self.dataOut.utctime, | |
198 | 'data': roundFloats(noisedB.reshape(-1, 1).tolist()), |
|
198 | 'data': roundFloats(noisedB.reshape(-1, 1).tolist()), | |
199 | 'channels': ['Ch %s' % ch for ch in self.dataOut.channelList], |
|
199 | 'channels': ['Ch %s' % ch for ch in self.dataOut.channelList], | |
200 | 'interval': self.dataOut.getTimeInterval(), |
|
200 | 'interval': self.dataOut.getTimeInterval(), | |
201 | 'type': self.plottype, |
|
201 | 'type': self.plottype, | |
202 | 'yData': yData |
|
202 | 'yData': yData | |
203 | } |
|
203 | } | |
204 | elif self.plottype == 'snr': |
|
204 | elif self.plottype == 'snr': | |
205 | data = getattr(self.dataOut, 'data_SNR') |
|
205 | data = getattr(self.dataOut, 'data_SNR') | |
206 | avgdB = 10*numpy.log10(data) |
|
206 | avgdB = 10*numpy.log10(data) | |
207 |
|
207 | |||
208 | ylen = data[0].size |
|
208 | ylen = data[0].size | |
209 | dy = numpy.floor(ylen/self.__MAXNUMY) + 1 |
|
209 | dy = numpy.floor(ylen/self.__MAXNUMY) + 1 | |
210 | AVG = [0 for i in self.dataOut.channelList] |
|
210 | AVG = [0 for i in self.dataOut.channelList] | |
211 | for i in self.dataOut.channelList: |
|
211 | for i in self.dataOut.channelList: | |
212 | AVG[i] = avgdB[i][::dy].tolist() |
|
212 | AVG[i] = avgdB[i][::dy].tolist() | |
213 | payload = { |
|
213 | payload = { | |
214 | 'timestamp': self.dataOut.utctime, |
|
214 | 'timestamp': self.dataOut.utctime, | |
215 | 'data': roundFloats(AVG), |
|
215 | 'data': roundFloats(AVG), | |
216 | 'channels': ['Ch %s' % ch for ch in self.dataOut.channelList], |
|
216 | 'channels': ['Ch %s' % ch for ch in self.dataOut.channelList], | |
217 | 'type': self.plottype, |
|
217 | 'type': self.plottype, | |
218 | 'yData': yData |
|
218 | 'yData': yData | |
219 | } |
|
219 | } | |
220 | else: |
|
220 | else: | |
221 | print "Tipo de grafico invalido" |
|
221 | print "Tipo de grafico invalido" | |
222 | payload = { |
|
222 | payload = { | |
223 | 'data': 'None', |
|
223 | 'data': 'None', | |
224 | 'timestamp': 'None', |
|
224 | 'timestamp': 'None', | |
225 | 'type': None |
|
225 | 'type': None | |
226 | } |
|
226 | } | |
227 | # print 'Publishing data to {}'.format(self.host) |
|
227 | # print 'Publishing data to {}'.format(self.host) | |
228 | self.client.publish(self.topic + self.plottype, json.dumps(payload), qos=0) |
|
228 | self.client.publish(self.topic + self.plottype, json.dumps(payload), qos=0) | |
229 |
|
229 | |||
230 | if self.zeromq is 1: |
|
230 | if self.zeromq is 1: | |
231 | print '[Sending] {} - {}'.format(self.dataOut.type, self.dataOut.datatime) |
|
231 | print '[Sending] {} - {}'.format(self.dataOut.type, self.dataOut.datatime) | |
232 | self.zmq_socket.send_pyobj(self.dataOut) |
|
232 | self.zmq_socket.send_pyobj(self.dataOut) | |
233 |
|
233 | |||
234 | def run(self, dataOut, **kwargs): |
|
234 | def run(self, dataOut, **kwargs): | |
235 | self.dataOut = dataOut |
|
235 | self.dataOut = dataOut | |
236 | if not self.isConfig: |
|
236 | if not self.isConfig: | |
237 | self.setup(**kwargs) |
|
237 | self.setup(**kwargs) | |
238 | self.isConfig = True |
|
238 | self.isConfig = True | |
239 |
|
239 | |||
240 | self.publish_data() |
|
240 | self.publish_data() | |
241 | time.sleep(self.delay) |
|
241 | time.sleep(self.delay) | |
242 |
|
242 | |||
243 | def close(self): |
|
243 | def close(self): | |
244 | if self.zeromq is 1: |
|
244 | if self.zeromq is 1: | |
245 | self.dataOut.finished = True |
|
245 | self.dataOut.finished = True | |
246 | self.zmq_socket.send_pyobj(self.dataOut) |
|
246 | self.zmq_socket.send_pyobj(self.dataOut) | |
247 |
|
247 | |||
248 | if self.client: |
|
248 | if self.client: | |
249 | self.client.loop_stop() |
|
249 | self.client.loop_stop() | |
250 | self.client.disconnect() |
|
250 | self.client.disconnect() | |
251 |
|
251 | |||
252 |
|
252 | |||
253 | class ReceiverData(ProcessingUnit, Process): |
|
253 | class ReceiverData(ProcessingUnit, Process): | |
254 |
|
254 | |||
255 | def __init__(self, **kwargs): |
|
255 | def __init__(self, **kwargs): | |
256 |
|
256 | |||
257 | ProcessingUnit.__init__(self, **kwargs) |
|
257 | ProcessingUnit.__init__(self, **kwargs) | |
258 | Process.__init__(self) |
|
258 | Process.__init__(self) | |
259 | self.mp = False |
|
259 | self.mp = False | |
260 | self.isConfig = False |
|
260 | self.isConfig = False | |
261 | self.plottypes =[] |
|
261 | self.plottypes =[] | |
262 | self.connections = 0 |
|
262 | self.connections = 0 | |
263 | server = kwargs.get('server', 'zmq.pipe') |
|
263 | server = kwargs.get('server', 'zmq.pipe') | |
264 | if 'tcp://' in server: |
|
264 | if 'tcp://' in server: | |
265 | address = server |
|
265 | address = server | |
266 | else: |
|
266 | else: | |
267 | address = 'ipc:///tmp/%s' % server |
|
267 | address = 'ipc:///tmp/%s' % server | |
268 |
|
268 | |||
269 | self.address = address |
|
269 | self.address = address | |
270 | self.plottypes = [s.strip() for s in kwargs.get('plottypes', 'rti').split(',')] |
|
270 | self.plottypes = [s.strip() for s in kwargs.get('plottypes', 'rti').split(',')] | |
271 | self.realtime = kwargs.get('realtime', False) |
|
271 | self.realtime = kwargs.get('realtime', False) | |
272 | global throttle_value |
|
272 | global throttle_value | |
273 | throttle_value = kwargs.get('throttle', 10) |
|
273 | throttle_value = kwargs.get('throttle', 10) | |
274 | self.setup() |
|
274 | self.setup() | |
275 |
|
275 | |||
276 | def setup(self): |
|
276 | def setup(self): | |
277 |
|
277 | |||
278 | self.data = {} |
|
278 | self.data = {} | |
279 | self.data['times'] = [] |
|
279 | self.data['times'] = [] | |
280 | for plottype in self.plottypes: |
|
280 | for plottype in self.plottypes: | |
281 | self.data[plottype] = {} |
|
281 | self.data[plottype] = {} | |
282 | self.data['noise'] = {} |
|
282 | self.data['noise'] = {} | |
283 | self.isConfig = True |
|
283 | self.isConfig = True | |
284 |
|
284 | |||
285 | def event_monitor(self, monitor): |
|
285 | def event_monitor(self, monitor): | |
286 |
|
286 | |||
287 | events = {} |
|
287 | events = {} | |
288 |
|
288 | |||
289 | for name in dir(zmq): |
|
289 | for name in dir(zmq): | |
290 | if name.startswith('EVENT_'): |
|
290 | if name.startswith('EVENT_'): | |
291 | value = getattr(zmq, name) |
|
291 | value = getattr(zmq, name) | |
292 | events[value] = name |
|
292 | events[value] = name | |
293 |
|
293 | |||
294 | while monitor.poll(): |
|
294 | while monitor.poll(): | |
295 | evt = recv_monitor_message(monitor) |
|
295 | evt = recv_monitor_message(monitor) | |
296 | if evt['event'] == 32: |
|
296 | if evt['event'] == 32: | |
297 | self.connections += 1 |
|
297 | self.connections += 1 | |
298 | if evt['event'] == 512: |
|
298 | if evt['event'] == 512: | |
299 | pass |
|
299 | pass | |
300 | if self.connections == 0 and self.started is True: |
|
300 | if self.connections == 0 and self.started is True: | |
301 | self.ended = True |
|
301 | self.ended = True | |
302 | # send('ENDED') |
|
302 | # send('ENDED') | |
303 | evt.update({'description': events[evt['event']]}) |
|
303 | evt.update({'description': events[evt['event']]}) | |
304 |
|
304 | |||
305 | if evt['event'] == zmq.EVENT_MONITOR_STOPPED: |
|
305 | if evt['event'] == zmq.EVENT_MONITOR_STOPPED: | |
306 | break |
|
306 | break | |
307 | monitor.close() |
|
307 | monitor.close() | |
308 | print("event monitor thread done!") |
|
308 | print("event monitor thread done!") | |
309 |
|
309 | |||
310 | @throttle(seconds=throttle_value) |
|
310 | @throttle(seconds=throttle_value) | |
311 | def sendData(self, data): |
|
311 | def sendData(self, data): | |
312 | self.send(data) |
|
312 | self.send(data) | |
313 |
|
313 | |||
314 | def send(self, data): |
|
314 | def send(self, data): | |
315 | print '[sending] data=%s size=%s' % (data.keys(), len(data['times'])) |
|
315 | print '[sending] data=%s size=%s' % (data.keys(), len(data['times'])) | |
316 | self.sender.send_pyobj(data) |
|
316 | self.sender.send_pyobj(data) | |
317 |
|
317 | |||
318 | def update(self): |
|
318 | def update(self): | |
319 |
|
319 | |||
320 | t = self.dataOut.ltctime |
|
320 | t = self.dataOut.ltctime | |
321 | self.data['times'].append(t) |
|
321 | self.data['times'].append(t) | |
322 | self.data['dataOut'] = self.dataOut |
|
322 | self.data['dataOut'] = self.dataOut | |
323 |
|
323 | |||
324 | for plottype in self.plottypes: |
|
324 | for plottype in self.plottypes: | |
325 |
|
325 | |||
326 | if plottype == 'spc': |
|
326 | if plottype == 'spc': | |
327 | z = self.dataOut.data_spc/self.dataOut.normFactor |
|
327 | z = self.dataOut.data_spc/self.dataOut.normFactor | |
328 | self.data[plottype] = 10*numpy.log10(z) |
|
328 | self.data[plottype] = 10*numpy.log10(z) | |
329 | self.data['noise'][t] = 10*numpy.log10(self.dataOut.getNoise()/self.dataOut.normFactor) |
|
329 | self.data['noise'][t] = 10*numpy.log10(self.dataOut.getNoise()/self.dataOut.normFactor) | |
330 | if plottype == 'rti': |
|
330 | if plottype == 'rti': | |
331 | self.data[plottype][t] = self.dataOut.getPower() |
|
331 | self.data[plottype][t] = self.dataOut.getPower() | |
332 | if plottype == 'snr': |
|
332 | if plottype == 'snr': | |
333 | self.data[plottype][t] = 10*numpy.log10(self.dataOut.data_SNR) |
|
333 | self.data[plottype][t] = 10*numpy.log10(self.dataOut.data_SNR) | |
334 | if plottype == 'dop': |
|
334 | if plottype == 'dop': | |
335 | self.data[plottype][t] = 10*numpy.log10(self.dataOut.data_DOP) |
|
335 | self.data[plottype][t] = 10*numpy.log10(self.dataOut.data_DOP) | |
336 | if plottype == 'coh': |
|
336 | if plottype == 'coh': | |
337 | self.data[plottype][t] = self.dataOut.getCoherence() |
|
337 | self.data[plottype][t] = self.dataOut.getCoherence() | |
338 | if plottype == 'phase': |
|
338 | if plottype == 'phase': | |
339 | self.data[plottype][t] = self.dataOut.getCoherence(phase=True) |
|
339 | self.data[plottype][t] = self.dataOut.getCoherence(phase=True) | |
340 |
|
340 | |||
341 | def run(self): |
|
341 | def run(self): | |
342 |
|
342 | |||
343 | print '[Starting] {} from {}'.format(self.name, self.address) |
|
343 | print '[Starting] {} from {}'.format(self.name, self.address) | |
344 |
|
344 | |||
345 | self.context = zmq.Context() |
|
345 | self.context = zmq.Context() | |
346 | self.receiver = self.context.socket(zmq.PULL) |
|
346 | self.receiver = self.context.socket(zmq.PULL) | |
347 | self.receiver.bind(self.address) |
|
347 | self.receiver.bind(self.address) | |
348 | monitor = self.receiver.get_monitor_socket() |
|
348 | monitor = self.receiver.get_monitor_socket() | |
349 | self.sender = self.context.socket(zmq.PUB) |
|
349 | self.sender = self.context.socket(zmq.PUB) | |
350 |
|
350 | |||
351 | self.sender.bind("ipc:///tmp/zmq.plots") |
|
351 | self.sender.bind("ipc:///tmp/zmq.plots") | |
352 |
|
352 | |||
353 | t = Thread(target=self.event_monitor, args=(monitor,)) |
|
353 | t = Thread(target=self.event_monitor, args=(monitor,)) | |
354 | t.start() |
|
354 | t.start() | |
355 |
|
355 | |||
356 | while True: |
|
356 | while True: | |
357 | self.dataOut = self.receiver.recv_pyobj() |
|
357 | self.dataOut = self.receiver.recv_pyobj() | |
358 | print '[Receiving] {} - {}'.format(self.dataOut.type, |
|
358 | print '[Receiving] {} - {}'.format(self.dataOut.type, | |
359 | self.dataOut.datatime.ctime()) |
|
359 | self.dataOut.datatime.ctime()) | |
360 |
|
360 | |||
361 | self.update() |
|
361 | self.update() | |
362 |
|
362 | |||
363 | if self.dataOut.finished is True: |
|
363 | if self.dataOut.finished is True: | |
364 | self.send(self.data) |
|
364 | self.send(self.data) | |
365 | self.connections -= 1 |
|
365 | self.connections -= 1 | |
366 | if self.connections==0 and self.started: |
|
366 | if self.connections == 0 and self.started: | |
367 | self.ended = True |
|
367 | self.ended = True | |
368 | self.data['ENDED'] = True |
|
368 | self.data['ENDED'] = True | |
369 | self.send(self.data) |
|
369 | self.send(self.data) | |
370 | self.setup() |
|
370 | self.setup() | |
371 | else: |
|
371 | else: | |
372 | if self.realtime: |
|
372 | if self.realtime: | |
373 | self.send(self.data) |
|
373 | self.send(self.data) | |
374 | else: |
|
374 | else: | |
375 | self.sendData(self.data) |
|
375 | self.sendData(self.data) | |
376 | self.started = True |
|
376 | self.started = True | |
377 |
|
377 | |||
378 | return |
|
378 | return |
@@ -1,77 +1,75 | |||||
1 | #!/usr/bin/env python |
|
1 | #!/usr/bin/env python | |
2 | ''' |
|
2 | ''' | |
3 | Created on Jul 7, 2014 |
|
3 | Created on Jul 7, 2014 | |
4 |
|
4 | |||
5 | @author: roj-idl71 |
|
5 | @author: roj-idl71 | |
6 | ''' |
|
6 | ''' | |
7 | import os, sys |
|
7 | import os, sys | |
8 | from datetime import datetime, timedelta |
|
8 | from datetime import datetime, timedelta | |
9 | import multiprocessing |
|
9 | import multiprocessing | |
10 | from schainpy.controller import Project |
|
10 | from schainpy.controller import Project | |
11 |
|
11 | |||
12 | def main(date): |
|
12 | def main(date): | |
13 |
|
13 | |||
14 | controllerObj = Project() |
|
14 | controllerObj = Project() | |
15 |
|
15 | |||
16 |
controllerObj.setup(id |
|
16 | controllerObj.setup(id='191', name='test01', description='') | |
17 |
|
17 | |||
18 | readUnitConfObj = controllerObj.addReadUnit(datatype='Spectra', |
|
18 | readUnitConfObj = controllerObj.addReadUnit(datatype='Spectra', | |
19 |
path='/ |
|
19 | path='/home/nanosat/data/zeus', | |
20 | startDate=date, |
|
20 | startDate=date, | |
21 | endDate=date, |
|
21 | endDate=date, | |
22 | startTime='00:00:00', |
|
22 | startTime='00:00:00', | |
23 | endTime='23:59:59', |
|
23 | endTime='23:59:59', | |
24 | online=0, |
|
24 | online=0, | |
25 | walk=1, |
|
25 | walk=1, | |
26 | expLabel='') |
|
26 | expLabel='') | |
27 |
|
27 | |||
28 | procUnitConfObj1 = controllerObj.addProcUnit(datatype='Spectra', inputId=readUnitConfObj.getId()) |
|
28 | procUnitConfObj1 = controllerObj.addProcUnit(datatype='Spectra', inputId=readUnitConfObj.getId()) | |
29 | #opObj11 = procUnitConfObj1.addOperation(name='removeDC') |
|
29 | #opObj11 = procUnitConfObj1.addOperation(name='removeDC') | |
30 | #opObj11.addParameter(name='mode', value='1', format='int') |
|
30 | #opObj11.addParameter(name='mode', value='1', format='int') | |
31 |
|
31 | |||
32 | #opObj11 = procUnitConfObj1.addOperation(name='removeInterference') |
|
32 | #opObj11 = procUnitConfObj1.addOperation(name='removeInterference') | |
33 |
|
33 | |||
34 |
|
34 | |||
35 | # opObj11 = procUnitConfObj1.addOperation(name='RTIPlot', optype='other') |
|
35 | # opObj11 = procUnitConfObj1.addOperation(name='RTIPlot', optype='other') | |
36 | # opObj11.addParameter(name='id', value='10', format='int') |
|
36 | # opObj11.addParameter(name='id', value='10', format='int') | |
37 | # opObj11.addParameter(name='wintitle', value='150Km', format='str') |
|
37 | # opObj11.addParameter(name='wintitle', value='150Km', format='str') | |
38 | # opObj11.addParameter(name='colormap', value='jro', format='str') |
|
38 | # opObj11.addParameter(name='colormap', value='jro', format='str') | |
39 | # opObj11.addParameter(name='xaxis', value='time', format='str') |
|
39 | # opObj11.addParameter(name='xaxis', value='time', format='str') | |
40 | # opObj11.addParameter(name='xmin', value='0', format='int') |
|
40 | # opObj11.addParameter(name='xmin', value='0', format='int') | |
41 | # opObj11.addParameter(name='xmax', value='23', format='int') |
|
41 | # opObj11.addParameter(name='xmax', value='23', format='int') | |
42 | # #opObj11.addParameter(name='ymin', value='100', format='int') |
|
42 | # #opObj11.addParameter(name='ymin', value='100', format='int') | |
43 | # #opObj11.addParameter(name='ymax', value='150', format='int') |
|
43 | # #opObj11.addParameter(name='ymax', value='150', format='int') | |
44 | # opObj11.addParameter(name='zmin', value='10', format='int') |
|
44 | # opObj11.addParameter(name='zmin', value='10', format='int') | |
45 | # opObj11.addParameter(name='zmax', value='35', format='int') |
|
45 | # opObj11.addParameter(name='zmax', value='35', format='int') | |
46 |
|
46 | |||
47 |
|
47 | |||
48 |
|
48 | |||
49 |
|
49 | |||
50 | opObj11 = procUnitConfObj1.addOperation(name='PlotRTIData', optype='other') |
|
50 | opObj11 = procUnitConfObj1.addOperation(name='PlotRTIData', optype='other') | |
51 | opObj11.addParameter(name='id', value='12', format='int') |
|
51 | opObj11.addParameter(name='id', value='12', format='int') | |
52 | opObj11.addParameter(name='wintitle', value='150Km', format='str') |
|
52 | opObj11.addParameter(name='wintitle', value='150Km', format='str') | |
53 | opObj11.addParameter(name='colormap', value='jro', format='str') |
|
53 | opObj11.addParameter(name='colormap', value='jro', format='str') | |
54 | opObj11.addParameter(name='xaxis', value='time', format='str') |
|
54 | opObj11.addParameter(name='xaxis', value='time', format='str') | |
55 | opObj11.addParameter(name='xmin', value='0', format='int') |
|
55 | opObj11.addParameter(name='xmin', value='0', format='int') | |
56 | opObj11.addParameter(name='xmax', value='23', format='int') |
|
56 | opObj11.addParameter(name='xmax', value='23', format='int') | |
57 | #opObj11.addParameter(name='ymin', value='100', format='int') |
|
57 | #opObj11.addParameter(name='ymin', value='100', format='int') | |
58 | #opObj11.addParameter(name='ymax', value='150', format='int') |
|
58 | #opObj11.addParameter(name='ymax', value='150', format='int') | |
59 | opObj11.addParameter(name='zmin', value='10', format='int') |
|
59 | opObj11.addParameter(name='zmin', value='10', format='int') | |
60 | opObj11.addParameter(name='zmax', value='35', format='int') |
|
60 | opObj11.addParameter(name='zmax', value='35', format='int') | |
61 | #opObj11.addParameter(name='pause', value='1', format='bool') |
|
61 | #opObj11.addParameter(name='pause', value='1', format='bool') | |
62 | opObj11.addParameter(name='show', value='0', format='bool') |
|
62 | opObj11.addParameter(name='show', value='0', format='bool') | |
63 | opObj11.addParameter(name='save', value='/tmp', format='str') |
|
63 | opObj11.addParameter(name='save', value='/tmp', format='str') | |
64 |
|
64 | |||
65 |
|
65 | |||
66 | controllerObj.start() |
|
66 | controllerObj.start() | |
67 |
|
67 | |||
68 | if __name__=='__main__': |
|
68 | if __name__=='__main__': | |
69 |
|
69 | |||
70 | dt = datetime(2017, 1, 12) |
|
70 | dt = datetime(2017, 1, 12) | |
71 |
|
71 | |||
72 |
dates = [(dt+timedelta(x)).strftime('%Y/%m/%d') |
|
72 | dates = [(dt+timedelta(x)).strftime('%Y/%m/%d') for x in range(20)] | |
73 |
|
73 | |||
74 | p = multiprocessing.Pool(4) |
|
74 | p = multiprocessing.Pool(4) | |
75 | p.map(main, dates) |
|
75 | p.map(main, dates) | |
76 |
|
||||
77 | No newline at end of file |
|
@@ -1,42 +1,42 | |||||
1 | #!/usr/bin/env python |
|
1 | #!/usr/bin/env python | |
2 | ''' |
|
2 | ''' | |
3 | Created on Jul 7, 2014 |
|
3 | Created on Jul 7, 2014 | |
4 |
|
4 | |||
5 | @author: roj-idl71 |
|
5 | @author: roj-idl71 | |
6 | ''' |
|
6 | ''' | |
7 | import os, sys |
|
7 | import os, sys | |
8 |
|
8 | |||
9 | from schainpy.controller import Project |
|
9 | from schainpy.controller import Project | |
10 |
|
10 | |||
11 | if __name__ == '__main__': |
|
11 | if __name__ == '__main__': | |
12 | desc = "Segundo Test" |
|
12 | desc = "Segundo Test" | |
13 |
|
13 | |||
14 | controllerObj = Project() |
|
14 | controllerObj = Project() | |
15 |
controllerObj.setup(id |
|
15 | controllerObj.setup(id='191', name='test01', description=desc) | |
16 |
|
16 | |||
17 | proc1 = controllerObj.addProcUnit(name='ReceiverData') |
|
17 | proc1 = controllerObj.addProcUnit(name='ReceiverData') | |
18 | # proc1.addParameter(name='server', value='tcp://10.10.10.87:3000', format='str') |
|
18 | # proc1.addParameter(name='server', value='tcp://10.10.10.87:3000', format='str') | |
19 | proc1.addParameter(name='realtime', value='1', format='bool') |
|
19 | proc1.addParameter(name='realtime', value='1', format='bool') | |
20 | proc1.addParameter(name='plottypes', value='rti,spc', format='str') |
|
20 | proc1.addParameter(name='plottypes', value='rti,spc', format='str') | |
21 |
|
21 | |||
22 | op1 = proc1.addOperation(name='PlotRTIData', optype='other') |
|
22 | op1 = proc1.addOperation(name='PlotRTIData', optype='other') | |
23 | op1.addParameter(name='wintitle', value='Julia 150Km', format='str') |
|
23 | op1.addParameter(name='wintitle', value='Julia 150Km', format='str') | |
24 |
|
24 | |||
25 | op2 = proc1.addOperation(name='PlotSpectraData', optype='other') |
|
25 | op2 = proc1.addOperation(name='PlotSpectraData', optype='other') | |
26 | op2.addParameter(name='wintitle', value='Julia 150Km', format='str') |
|
26 | op2.addParameter(name='wintitle', value='Julia 150Km', format='str') | |
27 | op2.addParameter(name='xaxis', value='velocity', format='str') |
|
27 | op2.addParameter(name='xaxis', value='velocity', format='str') | |
28 | op2.addParameter(name='showprofile', value='1', format='bool') |
|
28 | op2.addParameter(name='showprofile', value='1', format='bool') | |
29 | #op2.addParameter(name='xmin', value='-0.1', format='float') |
|
29 | #op2.addParameter(name='xmin', value='-0.1', format='float') | |
30 | #op2.addParameter(name='xmax', value='0.1', format='float') |
|
30 | #op2.addParameter(name='xmax', value='0.1', format='float') | |
31 |
|
31 | |||
32 | # op1 = proc1.addOperation(name='PlotPHASEData', optype='other') |
|
32 | # op1 = proc1.addOperation(name='PlotPHASEData', optype='other') | |
33 | # op1.addParameter(name='wintitle', value='Julia 150Km', format='str') |
|
33 | # op1.addParameter(name='wintitle', value='Julia 150Km', format='str') | |
34 |
|
34 | |||
35 |
|
35 | |||
36 | # proc1 = controllerObj.addProcUnit(name='ReceiverData') |
|
36 | # proc1 = controllerObj.addProcUnit(name='ReceiverData') | |
37 | # proc1.addParameter(name='server', value='pipe2', format='str') |
|
37 | # proc1.addParameter(name='server', value='pipe2', format='str') | |
38 | # proc1.addParameter(name='mode', value='buffer', format='str') |
|
38 | # proc1.addParameter(name='mode', value='buffer', format='str') | |
39 | # proc1.addParameter(name='plottypes', value='snr', format='str') |
|
39 | # proc1.addParameter(name='plottypes', value='snr', format='str') | |
40 |
|
40 | |||
41 |
|
41 | |||
42 | controllerObj.start() |
|
42 | controllerObj.start() |
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