@@ -1,273 +1,273 | |||
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1 | 1 | from schainpy.model.data.jrodata import * |
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2 | 2 | from schainpy.model.proc.jroproc_base import ProcessingUnit, Operation |
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3 | 3 | from schainpy.model.io.jroIO_base import * |
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4 | 4 | |
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5 | 5 | import scipy.io as sio |
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6 | 6 | import pprint |
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7 | 7 | import numpy as np |
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8 | 8 | from os import listdir |
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9 | 9 | from os.path import isfile, join |
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10 | 10 | import datetime |
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11 | 11 | import cmath |
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12 | 12 | |
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13 | 13 | class matoffReader(ProcessingUnit): |
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14 | 14 | |
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15 | 15 | index=None |
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16 | 16 | list=None |
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17 | 17 | firsttime=True |
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18 | 18 | utccounter=None |
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19 | 19 | utcfiletime=None |
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20 | 20 | utcmatcounter=0 |
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21 | 21 | utcfirst=None |
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22 | 22 | utclist=None |
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23 | 23 | |
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24 | 24 | def __init__(self): |
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25 | 25 | self.dataOut = Spectra() |
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26 | 26 | self.online = False |
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27 | 27 | return |
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28 | 28 | |
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29 | 29 | def __setHeader(self, datastuff): |
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30 | 30 | |
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31 | 31 | self.dataOut.pairsList=[(0,1)] |
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32 | 32 | self.dataOut.channelList = range(np.array(datastuff.get('power')).shape[1]) |
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33 | 33 | self.dataOut.nProfiles = len(np.array(datastuff.get('vel')).flatten()) #this! |
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34 | 34 | self.dataOut.nIncohInt = 20 |
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35 | 35 | self.dataOut.nCohInt = 1 #this! |
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36 | 36 | self.dataOut.ippSeconds = 0.004 #this! |
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37 | 37 | self.dataOut.nFFTPoints = len(np.array(datastuff.get('vel')).flatten()) |
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38 | 38 | self.dataOut.timeZone = 0 |
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39 | 39 | self.dataOut.heightList = np.array(datastuff.get('hts')).flatten() |
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40 | 40 | |
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41 | 41 | def __readFile(self, currentfile): |
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42 | 42 | print "Reading from this file:" + currentfile |
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43 | 43 | |
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44 | 44 | #filesplit=currentfile.split("\\") |
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45 | 45 | filesplit=currentfile.split("/") |
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46 | 46 | newsplit=filesplit[-2] |
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47 | 47 | newnewsplit=newsplit.split(".") |
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48 | 48 | newnewsplit=[int(i) for i in newnewsplit] |
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49 | 49 | gooblist=datetime.datetime(newnewsplit[0],newnewsplit[1],newnewsplit[2],newnewsplit[3],newnewsplit[4],newnewsplit[5]) |
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50 | 50 | self.utcfirst=(gooblist-datetime.datetime(1970,1,1)).total_seconds() |
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51 | 51 | |
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52 | 52 | |
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53 | 53 | newsplit=filesplit[-1] |
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54 | 54 | newnewsplit=newsplit.split(".") |
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55 | 55 | goobnum=newnewsplit[0] |
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56 | 56 | goobnum=int(goobnum) |
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57 | 57 | |
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58 | 58 | self.utcfirst=self.utcfirst+goobnum*2 |
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59 | 59 | # if (currentfile[43:]=='0.mat'): |
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60 | 60 | # self.utcmatcounter=0 |
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61 | 61 | # self.utcfirst=self.utclist[self.index] |
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62 | 62 | |
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63 | 63 | # if (self.utcmatcounter>60): |
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64 | 64 | # self.utcmatcounter=0 |
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65 | 65 | |
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66 | 66 | # print self.utcmatcounter |
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67 | 67 | print self.utcfirst |
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68 | 68 | try: |
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69 | 69 | datastuff=sio.loadmat(currentfile) |
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70 | 70 | except: |
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71 | 71 | return None, None |
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72 | 72 | |
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73 | 73 | dataphase=datastuff.get('phase') |
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74 | 74 | data3=datastuff.get('doppler0') |
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75 | 75 | data4=datastuff.get('doppler1') |
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76 | 76 | data3= np.array(data3) |
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77 | 77 | data4 = np.array(data4) |
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78 | 78 | datacoh=datastuff.get('coherence2') |
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79 | 79 | |
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80 | 80 | datacohphase=datacoh*np.exp(-dataphase*1j) |
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81 | 81 | # data31 = np.fliplr(data3) |
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82 | 82 | # data41 = np.fliplr(data4) |
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83 | 83 | |
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84 | 84 | data31 = data3.reshape((1,data3.shape[0],data3.shape[1])) |
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85 | 85 | data41 = data4.reshape((1,data4.shape[0],data4.shape[1])) |
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86 | 86 | datacohphase1 = datacohphase.reshape((1,datacoh.shape[0],datacoh.shape[1])) |
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87 | 87 | |
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88 | 88 | datastack = np.vstack((data31,data41)) |
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89 | 89 | |
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90 | 90 | self.__setHeader(datastuff) |
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91 | 91 | |
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92 | 92 | spc = datastack |
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93 | 93 | cspc = datacohphase1 |
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94 | 94 | |
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95 | 95 | return spc, cspc |
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96 | 96 | |
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97 | 97 | def __findFiles(self, path, startDate=None, endDate=None,startTime=datetime.time(0,0,0), endTime=datetime.time(23,59,59)): |
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98 | 98 | |
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99 | 99 | if startDate == None: |
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100 | 100 | startDate = datetime.date(1970,1,1) |
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101 | 101 | |
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102 | 102 | if endDate == None: |
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103 | 103 | endDate = datetime.date(2050,1,1) |
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104 | 104 | |
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105 | 105 | startsearch1=datetime.datetime.combine(startDate,startTime) |
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106 | 106 | startsearch2=(startsearch1-datetime.datetime(1970,1,1)).total_seconds() |
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107 | 107 | endsearch1=datetime.datetime.combine(endDate,endTime) |
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108 | 108 | endsearch2=(endsearch1-datetime.datetime(1970,1,1)).total_seconds() |
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109 | 109 | |
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110 | 110 | dirList = listdir(path) |
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111 | 111 | dirList = sorted(dirList) |
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112 | 112 | |
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113 | 113 | dirListFiltered=[] |
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114 | 114 | fileListFiltered=[] |
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115 | 115 | utclist=[] |
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116 | 116 | |
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117 | 117 | if not dirList: |
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118 | 118 | print "No directories found" |
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119 | 119 | return [] |
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120 | 120 | |
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121 | 121 | #if self.online: |
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122 | 122 | # dirList= [dirList[-1]] |
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123 | 123 | |
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124 | 124 | if self.online: |
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125 |
currentdate = datetime.datetime. |
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125 | currentdate = datetime.datetime.now() | |
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126 | 126 | strsplit1=currentdate.strftime('%Y.%m.%d') |
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127 | 127 | dirList = fnmatch.filter(dirList,strsplit1+'*') |
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128 | 128 | |
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129 | 129 | for thisDir in dirList: |
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130 | 130 | if not os.path.isdir(os.path.join(path, thisDir)): |
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131 | 131 | continue |
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132 | 132 | |
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133 | 133 | strsplit=thisDir.split('.') |
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134 | 134 | timeints=[int(i) for i in strsplit] |
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135 | 135 | timelist=datetime.datetime(timeints[0],timeints[1],timeints[2],timeints[3],timeints[4],timeints[5]) |
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136 | 136 | utctime=(timelist-datetime.datetime(1970,1,1)).total_seconds() |
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137 | 137 | |
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138 | 138 | if not self.online: |
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139 | 139 | if (utctime > endsearch2): |
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140 | 140 | continue |
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141 | 141 | |
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142 | 142 | if (utctime < startsearch2): |
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143 | 143 | continue |
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144 | 144 | |
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145 | 145 | dirListFiltered.append(thisDir) |
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146 | 146 | utclist.append(utctime) |
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147 | 147 | |
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148 | 148 | if not dirListFiltered: |
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149 | 149 | print "filtro" |
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150 | 150 | return [] |
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151 | 151 | |
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152 | 152 | for thisDir in dirListFiltered: |
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153 | 153 | |
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154 | 154 | pathFile = os.path.join(self.path, thisDir) |
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155 | 155 | |
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156 | 156 | fileList = os.listdir(pathFile) |
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157 | 157 | |
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158 | 158 | if not fileList: |
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159 | 159 | continue |
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160 | 160 | |
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161 | 161 | for k in range(len(fileList)): |
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162 | 162 | thisFile = str(k)+'.mat' |
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163 | 163 | |
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164 | 164 | if not os.path.isfile(os.path.join(pathFile, thisFile)): |
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165 | 165 | continue |
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166 | 166 | |
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167 | 167 | fileListFiltered.append(os.path.join(pathFile, thisFile)) |
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168 | 168 | |
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169 | 169 | return fileListFiltered |
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170 | 170 | |
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171 | 171 | def __getNextOnlineFile(self, seconds = 40): |
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172 | 172 | |
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173 | 173 | filename = self.__getNextOfflineFile() |
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174 | 174 | |
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175 | 175 | if filename: |
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176 | 176 | return filename |
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177 | 177 | |
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178 | 178 | ncurrentfiles = len(self.fileList) |
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179 | 179 | |
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180 | 180 | nTries = 0 |
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181 | 181 | while (True): |
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182 | 182 | filelist = self.__findFiles(self.path) |
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183 | 183 | if len(filelist) > ncurrentfiles: |
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184 | 184 | break |
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185 | 185 | |
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186 | 186 | nTries += 1 |
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187 | 187 | |
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188 | 188 | if nTries > 3: |
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189 | 189 | break |
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190 | 190 | |
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191 | 191 | print "Waiting %d seconds ..." %seconds |
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192 | 192 | time.sleep(40) |
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193 | 193 | |
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194 | 194 | if not (len(filelist) > ncurrentfiles): |
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195 | 195 | return None |
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196 | 196 | |
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197 | 197 | self.fileList = filelist |
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198 | 198 | filename = self.__getNextOfflineFile() |
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199 | 199 | |
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200 | 200 | return filename |
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201 | 201 | |
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202 | 202 | def __getNextOfflineFile(self): |
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203 | 203 | |
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204 | 204 | if self.index >= len(self.fileList): |
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205 | 205 | return None |
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206 | 206 | |
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207 | 207 | filename=self.fileList[self.index] |
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208 | 208 | self.index += 1 |
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209 | 209 | return filename |
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210 | 210 | |
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211 | 211 | def __getNextFile(self): |
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212 | 212 | |
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213 | 213 | if self.online: |
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214 | 214 | filename = self.__getNextOnlineFile() |
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215 | 215 | else: |
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216 | 216 | filename = self.__getNextOfflineFile() |
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217 | 217 | return filename |
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218 | 218 | |
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219 | 219 | def setup(self, path, startDate=None, endDate=None,startTime=datetime.time(0,0,0), endTime=datetime.time(23,59,59)): |
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220 | 220 | |
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221 | 221 | fileList = self.__findFiles(path, startDate, endDate, startTime, endTime) |
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222 | 222 | |
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223 | 223 | if self.online: |
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224 | 224 | self.index = len(fileList) -1 |
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225 | 225 | else: |
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226 | 226 | self.index = 0 |
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227 | 227 | |
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228 | 228 | self.fileList = fileList |
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229 | 229 | |
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230 | 230 | print "fin setup" |
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231 | 231 | |
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232 | 232 | def run(self,path=None,startDate=None, endDate=None, |
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233 | 233 | startTime=datetime.time(0,0,0), |
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234 | 234 | endTime=datetime.time(23,59,59), |
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235 | 235 | walk=True,timezone='ut', |
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236 | 236 | all=0,online=False,ext=None,**kwargs): |
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237 | 237 | |
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238 | 238 | self.path=path |
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239 | 239 | self.ext=ext |
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240 | 240 | self.startDate=startDate |
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241 | 241 | self.endDate=endDate |
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242 | 242 | self.startTime=startTime |
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243 | 243 | self.endTime=endTime |
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244 | 244 | self.online = online |
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245 | 245 | self.dataOut.flagNoData = True |
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246 | 246 | |
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247 | 247 | if (self.firsttime==True): |
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248 | 248 | self.setup(path, startDate, endDate, startTime, endTime) |
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249 | 249 | self.firsttime=False |
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250 | 250 | |
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251 | 251 | |
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252 | 252 | if not self.fileList: |
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253 | 253 | self.dataOut.flagNoData = True |
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254 | 254 | print "lista vacia" |
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255 | 255 | return |
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256 | 256 | |
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257 | 257 | currentfile = self.__getNextFile() |
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258 | 258 | |
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259 | 259 | if not currentfile: |
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260 | 260 | "no file" |
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261 | 261 | return |
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262 | 262 | |
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263 | 263 | spc, cspc = self.__readFile(currentfile) |
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264 | 264 | |
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265 | 265 | if spc!=None: |
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266 | 266 | |
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267 | 267 | self.dataOut.data_spc = spc |
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268 | 268 | self.dataOut.data_cspc = cspc |
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269 | 269 | self.dataOut.utctime = self.utcfirst |
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270 | 270 | self.dataOut.flagNoData = False |
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271 | 271 | |
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272 | 272 | return 1 |
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273 | 273 | No newline at end of file |
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