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schain-jc
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pyqt4 verification
José Chávez -
r1102:6934ad3ac023
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1 #!/bin/bash
2 # This hook is run after a new virtualenv is activated.
3 # ~/.virtualenvs/postmkvirtualenv
4
5 libs=( PyQt4 sip.so )
6
7 python_version=python$(python -c "import sys; print (str(sys.version_info[0])+'.'+str(sys.version_info[1]))")
8 var=( $(which -a $python_version) )
9
10 get_python_lib_cmd="from distutils.sysconfig import get_python_lib; print (get_python_lib())"
11 lib_virtualenv_path=$(python -c "$get_python_lib_cmd")
12 lib_system_path=$(${var[-1]} -c "$get_python_lib_cmd")
13
14 for lib in ${libs[@]}
15 do
16 ln -s $lib_system_path/$lib $lib_virtualenv_path/$lib
17 done
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@@ -1,147 +1,153
1 1 # Signal Chain
2 2
3 3 ## Introduction
4 4
5 5 Signal Chain (SCh) is a radar data processing library developed using [Python](www.python.org) at JRO. SCh provides modules to read, write, process and plot data.
6 6
7 7 ## Installation
8 8
9 9 Install system dependencies, clone the latest version from [git](http://jro-dev.igp.gob.pe/rhodecode/schain/) and install it as a normal python package.
10 10
11 11 ### Linux based system
12 12 ```
13 13 $ sudo apt-get install python-pip python-dev gfortran libpng-dev freetype* libblas-dev liblapack-dev libatlas-base-dev python-qt4 python-tk libssl-dev libhdf5-dev
14 $ sudo pip install numpy
15 14 $ git clone http://jro-dev.igp.gob.pe/rhodecode/schain/
16 15 $ cd schain
17 16 $ sudo pip install ./
18 17
19 18 ```
20 19 **It is recommended to install schain in a virtual environment**
21 20 ```
22 21 $ sudo pip install virtualenv
23 22 $ virtualenv /path/to/virtual --system-site-packages
24 23 $ source /path/to/virtual/bin/activate
25 24 (virtual) $ cd schain
26 25 (virtual) $ pip install ./
27 26
28 27 ```
29 28
30 29 ### MAC Os
31 30 ```
32 31 $ brew install cartr/qt4/pyqt
33 32 $ git clone http://jro-dev.igp.gob.pe/rhodecode/schain/
34 33 $ cd schain
35 34 $ pip install ./
36 35 ```
37 36
38 37 if ```pip install ./``` does not work, install a proper python enviroment, and repeat the steps.
39 38 ```
40 39 $ brew install python
41 40 ```
42 41
42 ### GUI Installation
43
44 ```
45 $ sudo apt-get install python-pip python-dev gfortran libpng-dev freetype* libblas-dev liblapack-dev libatlas-base-dev python-qt4 python-tk libssl-dev libhdf5-dev
46 $ (virtual) bash link_PyQt4.sh
47 ```
48
43 49
44 50 ## First Script
45 51
46 52 Read Spectra data (.pdata) - remove dc - plot spectra & RTI
47 53
48 54 Import SCh and creating a project
49 55
50 56 ```python
51 57 #!/usr/bin/python
52 58
53 59 from schainpy.controller import Project
54 60
55 61 controller = Project()
56 62 controller.setup(id = '100',
57 63 name='test',
58 64 description='Basic experiment')
59 65
60 66
61 67 ```
62 68
63 69 Adding read unit and operations
64 70
65 71 ```python
66 72 read_unit = controller.addReadUnit(datatype='Spectra',
67 73 path='/path/to/pdata/',
68 74 startDate='2014/01/31',
69 75 endDate='2014/03/31',
70 76 startTime='00:00:00',
71 77 endTime='23:59:59',
72 78 online=0,
73 79 walk=0)
74 80
75 81 proc_unit = controller.addProcUnit(datatype='Spectra',
76 82 inputId=read_unit.getId())
77 83
78 84 op = proc_unit.addOperation(name='selectChannels')
79 85 op.addParameter(name='channelList', value='0,1', format='intlist')
80 86
81 87 op = proc_unit.addOperation(name='selectHeights')
82 88 op.addParameter(name='minHei', value='80', format='float')
83 89 op.addParameter(name='maxHei', value='200', format='float')
84 90
85 91 op = proc_unit.addOperation(name='removeDC')
86 92
87 93 ```
88 94
89 95 Plotting data & start project
90 96
91 97 ```python
92 98 op = proc_unit.addOperation(name='SpectraPlot', optype='other')
93 99 op.addParameter(name='id', value='1', format='int')
94 100 op.addParameter(name='wintitle', value='Spectra', format='str')
95 101
96 102 op = procUnitConfObj1.addOperation(name='RTIPlot', optype='other')
97 103 op.addParameter(name='id', value='2', format='int')
98 104 op.addParameter(name='wintitle', value='RTI', format='str')
99 105
100 106 controller.start()
101 107
102 108 ```
103 109
104 110 Full script
105 111
106 112
107 113 ```python
108 114 #!/usr/bin/python
109 115
110 116 from schainpy.controller import Project
111 117
112 118 controller = Project()
113 119 controller.setup(id = '100',
114 120 name='test',
115 121 description='Basic experiment')
116 122 read_unit = controller.addReadUnit(datatype='Spectra',
117 123 path='/path/to/pdata/',
118 124 startDate='2014/01/31',
119 125 endDate='2014/03/31',
120 126 startTime='00:00:00',
121 127 endTime='23:59:59',
122 128 online=0,
123 129 walk=0)
124 130
125 131 proc_unit = controller.addProcUnit(datatype='Spectra',
126 132 inputId=read_unit.getId())
127 133
128 134 op = proc_unit.addOperation(name='selectChannels')
129 135 op.addParameter(name='channelList', value='0,1', format='intlist')
130 136
131 137 op = proc_unit.addOperation(name='selectHeights')
132 138 op.addParameter(name='minHei', value='80', format='float')
133 139 op.addParameter(name='maxHei', value='200', format='float')
134 140
135 141 op = proc_unit.addOperation(name='removeDC')
136 142
137 143 op = proc_unit.addOperation(name='SpectraPlot', optype='other')
138 144 op.addParameter(name='id', value='6', format='int')
139 145 op.addParameter(name='wintitle', value='Spectra', format='str')
140 146
141 147 op = procUnitConfObj1.addOperation(name='RTIPlot', optype='other')
142 148 op.addParameter(name='id', value='2', format='int')
143 149 op.addParameter(name='wintitle', value='RTI', format='str')
144 150
145 151 controller.start()
146 152
147 153 ``` No newline at end of file
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1 1 #!/usr/bin/env python
2 import os, sys
3 from PyQt4 import QtCore, QtGui
4 from PyQt4.QtGui import QApplication
2 import os
3 import sys
4 from schainpy.utils import log
5
6 try:
7 from PyQt4 import QtCore, QtGui
8 from PyQt4.QtGui import QApplication
9 except:
10 log.error(
11 'You should install PtQt4 module in order to run the GUI. See the README.')
12 sys.exit()
13
5 14
6 15 from schainpy.gui.viewcontroller.initwindow import InitWindow
7 16 from schainpy.gui.viewcontroller.basicwindow import BasicWindow
8 17 from schainpy.gui.viewcontroller.workspace import Workspace
9 18
19
10 20 def main():
11
21
12 22 app = QtGui.QApplication(sys.argv)
13
14 Welcome=InitWindow()
15
16 if not Welcome.exec_():
17 sys.exit(-1)
18
19 WorkPathspace=Workspace()
20 if not WorkPathspace.exec_():
23
24 Welcome = InitWindow()
25
26 if not Welcome.exec_():
21 27 sys.exit(-1)
22
23 MainGUI=BasicWindow()
24 MainGUI.setWorkSpaceGUI(WorkPathspace.dirComBox.currentText())
28
29 WorkPathspace = Workspace()
30 if not WorkPathspace.exec_():
31 sys.exit(-1)
32
33 MainGUI = BasicWindow()
34 MainGUI.setWorkSpaceGUI(WorkPathspace.dirComBox.currentText())
25 35 MainGUI.show()
26 36 sys.exit(app.exec_())
27
37
38
28 39 if __name__ == "__main__":
29 main() No newline at end of file
40 main()
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@@ -1,69 +1,79
1 1 '''
2 2 Created on Jul 16, 2014
3 3
4 4 @author: Miguel Urco
5 5 '''
6 6
7 import os
7 8 from setuptools import setup, Extension
8 9 from setuptools.command.build_ext import build_ext as _build_ext
9 10 from schainpy import __version__
11 from schainpy.utils import log
10 12
11 13
12 14 class build_ext(_build_ext):
13 15 def finalize_options(self):
14 16 _build_ext.finalize_options(self)
15 17 # Prevent numpy from thinking it is still in its setup process:
16 18 __builtins__.__NUMPY_SETUP__ = False
17 19 import numpy
18 20 self.include_dirs.append(numpy.get_include())
19 21
20 22
23 try:
24 from PyQt4 import QtCore, QtGui
25 from PyQt4.QtGui import QApplication
26 except:
27 log.warning(
28 'You should install PtQt4 module in order to run the GUI. See the README.')
29
30
21 31 setup(name="schainpy",
22 32 version=__version__,
23 33 description="Python tools to read, write and process Jicamarca data",
24 34 author="Miguel Urco",
25 35 author_email="miguel.urco@jro.igp.gob.pe",
26 36 url="http://jro.igp.gob.pe",
27 37 packages={'schainpy',
28 38 'schainpy.model',
29 39 'schainpy.model.data',
30 40 'schainpy.model.graphics',
31 41 'schainpy.model.io',
32 42 'schainpy.model.proc',
33 43 'schainpy.model.serializer',
34 44 'schainpy.model.utils',
35 45 'schainpy.gui',
36 46 'schainpy.gui.figures',
37 47 'schainpy.gui.viewcontroller',
38 48 'schainpy.gui.viewer',
39 49 'schainpy.gui.viewer.windows'},
40 50 ext_package='schainpy',
41 51 py_modules=[''],
42 52 package_data={'': ['schain.conf.template'],
43 53 'schainpy.gui.figures': ['*.png', '*.jpg'],
44 54 },
45 55 include_package_data=False,
46 56 scripts=['schainpy/gui/schainGUI'],
47 57 ext_modules=[
48 58 Extension("cSchain", ["schainpy/model/proc/extensions.c"]
49 59 )],
50 60 entry_points={
51 61 'console_scripts': [
52 62 'schain = schaincli.cli:main',
53 63 ],
54 64 },
55 65 cmdclass={'build_ext': build_ext},
56 66 setup_requires=["numpy >= 1.11.2"],
57 67 install_requires=[
58 68 "scipy >= 0.14.0",
59 69 "h5py >= 2.2.1",
60 70 "matplotlib >= 1.4.2",
61 71 "pyfits >= 3.4",
62 72 "paramiko >= 2.1.2",
63 73 "paho-mqtt >= 1.2",
64 74 "zmq",
65 75 "fuzzywuzzy",
66 76 "click",
67 77 "python-Levenshtein"
68 78 ],
69 79 )
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