| @@ -1,1317 +1,1323 | |||
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1 | 1 | ''' |
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2 | 2 | Created on September , 2012 |
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3 | 3 | @author: |
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4 | 4 | ''' |
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5 | 5 | |
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6 | 6 | import sys |
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7 | 7 | import ast |
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8 | 8 | import datetime |
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9 | 9 | import traceback |
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10 | 10 | import math |
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11 | 11 | import time |
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12 | 12 | from multiprocessing import Process, cpu_count |
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13 | 13 | |
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14 | 14 | from xml.etree.ElementTree import ElementTree, Element, SubElement, tostring |
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15 | 15 | from xml.dom import minidom |
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16 | 16 | |
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17 | 17 | import schainpy |
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18 | 18 | import schainpy.admin |
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19 | 19 | from schainpy.model import * |
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20 | 20 | from schainpy.utils import log |
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21 | 21 | |
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22 | 22 | DTYPES = { |
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23 | 23 | 'Voltage': '.r', |
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24 | 24 | 'Spectra': '.pdata' |
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25 | 25 | } |
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26 | 26 | |
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27 | 27 | |
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28 | 28 | def MPProject(project, n=cpu_count()): |
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29 | 29 | ''' |
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30 | 30 | Project wrapper to run schain in n processes |
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31 | 31 | ''' |
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32 | 32 | |
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33 | 33 | rconf = project.getReadUnitObj() |
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34 | 34 | op = rconf.getOperationObj('run') |
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35 | 35 | dt1 = op.getParameterValue('startDate') |
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36 | 36 | dt2 = op.getParameterValue('endDate') |
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37 | tm1 = op.getParameterValue('startTime') | |
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38 | tm2 = op.getParameterValue('endTime') | |
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37 | 39 | days = (dt2 - dt1).days |
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38 | 40 | |
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39 | 41 | for day in range(days + 1): |
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40 | 42 | skip = 0 |
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41 | 43 | cursor = 0 |
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42 | 44 | processes = [] |
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43 | 45 | dt = dt1 + datetime.timedelta(day) |
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44 | 46 | dt_str = dt.strftime('%Y/%m/%d') |
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45 | 47 | reader = JRODataReader() |
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46 | 48 | paths, files = reader.searchFilesOffLine(path=rconf.path, |
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47 | 49 | startDate=dt, |
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48 | 50 | endDate=dt, |
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51 | startTime=tm1, | |
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52 | endTime=tm2, | |
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49 | 53 | ext=DTYPES[rconf.datatype]) |
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50 | 54 | nFiles = len(files) |
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51 | 55 | if nFiles == 0: |
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52 | 56 | continue |
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53 | 57 | skip = int(math.ceil(nFiles / n)) |
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54 | 58 | while nFiles > cursor * skip: |
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55 | 59 | rconf.update(startDate=dt_str, endDate=dt_str, cursor=cursor, |
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56 | 60 | skip=skip) |
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57 | 61 | p = project.clone() |
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58 | 62 | p.start() |
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59 | 63 | processes.append(p) |
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60 | 64 | cursor += 1 |
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61 | 65 | |
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62 | 66 | def beforeExit(exctype, value, trace): |
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63 | 67 | for process in processes: |
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64 | 68 | process.terminate() |
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65 | 69 | process.join() |
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66 | 70 | print traceback.print_tb(trace) |
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67 | 71 | |
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68 | 72 | sys.excepthook = beforeExit |
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69 | 73 | |
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70 | 74 | for process in processes: |
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71 | 75 | process.join() |
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72 | 76 | process.terminate() |
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73 | 77 | |
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74 | 78 | time.sleep(3) |
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75 | 79 | |
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76 | 80 | |
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77 | 81 | class ParameterConf(): |
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78 | 82 | |
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79 | 83 | id = None |
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80 | 84 | name = None |
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81 | 85 | value = None |
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82 | 86 | format = None |
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83 | 87 | |
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84 | 88 | __formated_value = None |
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85 | 89 | |
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86 | 90 | ELEMENTNAME = 'Parameter' |
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87 | 91 | |
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88 | 92 | def __init__(self): |
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89 | 93 | |
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90 | 94 | self.format = 'str' |
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91 | 95 | |
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92 | 96 | def getElementName(self): |
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93 | 97 | |
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94 | 98 | return self.ELEMENTNAME |
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95 | 99 | |
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96 | 100 | def getValue(self): |
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97 | 101 | |
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98 | 102 | value = self.value |
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99 | 103 | format = self.format |
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100 | 104 | |
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101 | 105 | if self.__formated_value != None: |
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102 | 106 | |
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103 | 107 | return self.__formated_value |
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104 | 108 | |
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105 | 109 | if format == 'obj': |
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106 | 110 | return value |
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107 | 111 | |
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108 | 112 | if format == 'str': |
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109 | 113 | self.__formated_value = str(value) |
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110 | 114 | return self.__formated_value |
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111 | 115 | |
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112 | 116 | if value == '': |
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113 | 117 | raise ValueError, '%s: This parameter value is empty' % self.name |
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114 | 118 | |
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115 | 119 | if format == 'list': |
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116 | 120 | strList = value.split(',') |
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117 | 121 | |
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118 | 122 | self.__formated_value = strList |
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119 | 123 | |
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120 | 124 | return self.__formated_value |
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121 | 125 | |
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122 | 126 | if format == 'intlist': |
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123 | 127 | ''' |
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124 | 128 | Example: |
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125 | 129 | value = (0,1,2) |
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126 | 130 | ''' |
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127 | 131 | |
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128 | 132 | new_value = ast.literal_eval(value) |
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129 | 133 | |
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130 | 134 | if type(new_value) not in (tuple, list): |
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131 | 135 | new_value = [int(new_value)] |
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132 | 136 | |
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133 | 137 | self.__formated_value = new_value |
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134 | 138 | |
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135 | 139 | return self.__formated_value |
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136 | 140 | |
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137 | 141 | if format == 'floatlist': |
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138 | 142 | ''' |
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139 | 143 | Example: |
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140 | 144 | value = (0.5, 1.4, 2.7) |
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141 | 145 | ''' |
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142 | 146 | |
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143 | 147 | new_value = ast.literal_eval(value) |
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144 | 148 | |
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145 | 149 | if type(new_value) not in (tuple, list): |
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146 | 150 | new_value = [float(new_value)] |
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147 | 151 | |
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148 | 152 | self.__formated_value = new_value |
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149 | 153 | |
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150 | 154 | return self.__formated_value |
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151 | 155 | |
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152 | 156 | if format == 'date': |
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153 | 157 | strList = value.split('/') |
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154 | 158 | intList = [int(x) for x in strList] |
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155 | 159 | date = datetime.date(intList[0], intList[1], intList[2]) |
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156 | 160 | |
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157 | 161 | self.__formated_value = date |
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158 | 162 | |
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159 | 163 | return self.__formated_value |
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160 | 164 | |
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161 | 165 | if format == 'time': |
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162 | 166 | strList = value.split(':') |
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163 | 167 | intList = [int(x) for x in strList] |
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164 | 168 | time = datetime.time(intList[0], intList[1], intList[2]) |
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165 | 169 | |
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166 | 170 | self.__formated_value = time |
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167 | 171 | |
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168 | 172 | return self.__formated_value |
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169 | 173 | |
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170 | 174 | if format == 'pairslist': |
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171 | 175 | ''' |
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172 | 176 | Example: |
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173 | 177 | value = (0,1),(1,2) |
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174 | 178 | ''' |
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175 | 179 | |
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176 | 180 | new_value = ast.literal_eval(value) |
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177 | 181 | |
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178 | 182 | if type(new_value) not in (tuple, list): |
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179 | 183 | raise ValueError, '%s has to be a tuple or list of pairs' % value |
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180 | 184 | |
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181 | 185 | if type(new_value[0]) not in (tuple, list): |
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182 | 186 | if len(new_value) != 2: |
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183 | 187 | raise ValueError, '%s has to be a tuple or list of pairs' % value |
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184 | 188 | new_value = [new_value] |
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185 | 189 | |
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186 | 190 | for thisPair in new_value: |
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187 | 191 | if len(thisPair) != 2: |
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188 | 192 | raise ValueError, '%s has to be a tuple or list of pairs' % value |
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189 | 193 | |
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190 | 194 | self.__formated_value = new_value |
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191 | 195 | |
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192 | 196 | return self.__formated_value |
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193 | 197 | |
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194 | 198 | if format == 'multilist': |
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195 | 199 | ''' |
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196 | 200 | Example: |
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197 | 201 | value = (0,1,2),(3,4,5) |
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198 | 202 | ''' |
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199 | 203 | multiList = ast.literal_eval(value) |
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200 | 204 | |
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201 | 205 | if type(multiList[0]) == int: |
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202 | 206 | multiList = ast.literal_eval('(' + value + ')') |
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203 | 207 | |
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204 | 208 | self.__formated_value = multiList |
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205 | 209 | |
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206 | 210 | return self.__formated_value |
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207 | 211 | |
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208 | 212 | if format == 'bool': |
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209 | 213 | value = int(value) |
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210 | 214 | |
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211 | 215 | if format == 'int': |
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212 | 216 | value = float(value) |
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213 | 217 | |
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214 | 218 | format_func = eval(format) |
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215 | 219 | |
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216 | 220 | self.__formated_value = format_func(value) |
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217 | 221 | |
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218 | 222 | return self.__formated_value |
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219 | 223 | |
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220 | 224 | def updateId(self, new_id): |
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221 | 225 | |
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222 | 226 | self.id = str(new_id) |
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223 | 227 | |
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224 | 228 | def setup(self, id, name, value, format='str'): |
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225 | 229 | self.id = str(id) |
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226 | 230 | self.name = name |
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227 | 231 | if format == 'obj': |
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228 | 232 | self.value = value |
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229 | 233 | else: |
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230 | 234 | self.value = str(value) |
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231 | 235 | self.format = str.lower(format) |
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232 | 236 | |
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233 | 237 | self.getValue() |
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234 | 238 | |
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235 | 239 | return 1 |
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236 | 240 | |
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237 | 241 | def update(self, name, value, format='str'): |
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238 | 242 | |
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239 | 243 | self.name = name |
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240 | 244 | self.value = str(value) |
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241 | 245 | self.format = format |
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242 | 246 | |
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243 | 247 | def makeXml(self, opElement): |
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244 | 248 | if self.name not in ('queue',): |
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245 | 249 | parmElement = SubElement(opElement, self.ELEMENTNAME) |
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246 | 250 | parmElement.set('id', str(self.id)) |
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247 | 251 | parmElement.set('name', self.name) |
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248 | 252 | parmElement.set('value', self.value) |
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249 | 253 | parmElement.set('format', self.format) |
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250 | 254 | |
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251 | 255 | def readXml(self, parmElement): |
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252 | 256 | |
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253 | 257 | self.id = parmElement.get('id') |
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254 | 258 | self.name = parmElement.get('name') |
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255 | 259 | self.value = parmElement.get('value') |
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256 | 260 | self.format = str.lower(parmElement.get('format')) |
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257 | 261 | |
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258 | 262 | # Compatible with old signal chain version |
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259 | 263 | if self.format == 'int' and self.name == 'idfigure': |
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260 | 264 | self.name = 'id' |
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261 | 265 | |
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262 | 266 | def printattr(self): |
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263 | 267 | |
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264 | 268 | print 'Parameter[%s]: name = %s, value = %s, format = %s' % (self.id, self.name, self.value, self.format) |
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265 | 269 | |
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266 | 270 | |
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267 | 271 | class OperationConf(): |
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268 | 272 | |
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269 | 273 | id = None |
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270 | 274 | name = None |
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271 | 275 | priority = None |
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272 | 276 | type = None |
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273 | 277 | |
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274 | 278 | parmConfObjList = [] |
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275 | 279 | |
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276 | 280 | ELEMENTNAME = 'Operation' |
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277 | 281 | |
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278 | 282 | def __init__(self): |
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279 | 283 | |
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280 | 284 | self.id = '0' |
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281 | 285 | self.name = None |
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282 | 286 | self.priority = None |
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283 | 287 | self.type = 'self' |
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284 | 288 | |
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285 | 289 | def __getNewId(self): |
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286 | 290 | |
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287 | 291 | return int(self.id) * 10 + len(self.parmConfObjList) + 1 |
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288 | 292 | |
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289 | 293 | def updateId(self, new_id): |
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290 | 294 | |
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291 | 295 | self.id = str(new_id) |
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292 | 296 | |
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293 | 297 | n = 1 |
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294 | 298 | for parmObj in self.parmConfObjList: |
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295 | 299 | |
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296 | 300 | idParm = str(int(new_id) * 10 + n) |
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297 | 301 | parmObj.updateId(idParm) |
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298 | 302 | |
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299 | 303 | n += 1 |
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300 | 304 | |
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301 | 305 | def getElementName(self): |
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302 | 306 | |
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303 | 307 | return self.ELEMENTNAME |
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304 | 308 | |
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305 | 309 | def getParameterObjList(self): |
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306 | 310 | |
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307 | 311 | return self.parmConfObjList |
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308 | 312 | |
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309 | 313 | def getParameterObj(self, parameterName): |
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310 | 314 | |
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311 | 315 | for parmConfObj in self.parmConfObjList: |
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312 | 316 | |
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313 | 317 | if parmConfObj.name != parameterName: |
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314 | 318 | continue |
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315 | 319 | |
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316 | 320 | return parmConfObj |
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317 | 321 | |
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318 | 322 | return None |
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319 | 323 | |
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320 | 324 | def getParameterObjfromValue(self, parameterValue): |
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321 | 325 | |
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322 | 326 | for parmConfObj in self.parmConfObjList: |
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323 | 327 | |
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324 | 328 | if parmConfObj.getValue() != parameterValue: |
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325 | 329 | continue |
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326 | 330 | |
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327 | 331 | return parmConfObj.getValue() |
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328 | 332 | |
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329 | 333 | return None |
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330 | 334 | |
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331 | 335 | def getParameterValue(self, parameterName): |
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332 | 336 | |
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333 | 337 | parameterObj = self.getParameterObj(parameterName) |
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334 | 338 | |
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335 | 339 | # if not parameterObj: |
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336 | 340 | # return None |
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337 | 341 | |
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338 | 342 | value = parameterObj.getValue() |
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339 | 343 | |
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340 | 344 | return value |
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341 | 345 | |
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342 | 346 | def getKwargs(self): |
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343 | 347 | |
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344 | 348 | kwargs = {} |
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345 | 349 | |
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346 | 350 | for parmConfObj in self.parmConfObjList: |
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347 | 351 | if self.name == 'run' and parmConfObj.name == 'datatype': |
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348 | 352 | continue |
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349 | 353 | |
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350 | 354 | kwargs[parmConfObj.name] = parmConfObj.getValue() |
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351 | 355 | |
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352 | 356 | return kwargs |
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353 | 357 | |
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354 | 358 | def setup(self, id, name, priority, type): |
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355 | 359 | |
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356 | 360 | self.id = str(id) |
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357 | 361 | self.name = name |
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358 | 362 | self.type = type |
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359 | 363 | self.priority = priority |
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360 | 364 | |
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361 | 365 | self.parmConfObjList = [] |
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362 | 366 | |
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363 | 367 | def removeParameters(self): |
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364 | 368 | |
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365 | 369 | for obj in self.parmConfObjList: |
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366 | 370 | del obj |
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367 | 371 | |
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368 | 372 | self.parmConfObjList = [] |
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369 | 373 | |
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370 | 374 | def addParameter(self, name, value, format='str'): |
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371 | 375 | |
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372 | 376 | if value is None: |
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373 | 377 | return None |
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374 | 378 | id = self.__getNewId() |
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375 | 379 | |
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376 | 380 | parmConfObj = ParameterConf() |
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377 | 381 | if not parmConfObj.setup(id, name, value, format): |
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378 | 382 | return None |
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379 | 383 | |
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380 | 384 | self.parmConfObjList.append(parmConfObj) |
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381 | 385 | |
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382 | 386 | return parmConfObj |
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383 | 387 | |
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384 | 388 | def changeParameter(self, name, value, format='str'): |
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385 | 389 | |
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386 | 390 | parmConfObj = self.getParameterObj(name) |
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387 | 391 | parmConfObj.update(name, value, format) |
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388 | 392 | |
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389 | 393 | return parmConfObj |
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390 | 394 | |
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391 | 395 | def makeXml(self, procUnitElement): |
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392 | 396 | |
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393 | 397 | opElement = SubElement(procUnitElement, self.ELEMENTNAME) |
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394 | 398 | opElement.set('id', str(self.id)) |
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395 | 399 | opElement.set('name', self.name) |
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396 | 400 | opElement.set('type', self.type) |
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397 | 401 | opElement.set('priority', str(self.priority)) |
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398 | 402 | |
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399 | 403 | for parmConfObj in self.parmConfObjList: |
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400 | 404 | parmConfObj.makeXml(opElement) |
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401 | 405 | |
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402 | 406 | def readXml(self, opElement): |
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403 | 407 | |
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404 | 408 | self.id = opElement.get('id') |
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405 | 409 | self.name = opElement.get('name') |
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406 | 410 | self.type = opElement.get('type') |
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407 | 411 | self.priority = opElement.get('priority') |
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408 | 412 | |
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409 | 413 | # Compatible with old signal chain version |
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410 | 414 | # Use of 'run' method instead 'init' |
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411 | 415 | if self.type == 'self' and self.name == 'init': |
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412 | 416 | self.name = 'run' |
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413 | 417 | |
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414 | 418 | self.parmConfObjList = [] |
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415 | 419 | |
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416 | 420 | parmElementList = opElement.iter(ParameterConf().getElementName()) |
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417 | 421 | |
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418 | 422 | for parmElement in parmElementList: |
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419 | 423 | parmConfObj = ParameterConf() |
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420 | 424 | parmConfObj.readXml(parmElement) |
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421 | 425 | |
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422 | 426 | # Compatible with old signal chain version |
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423 | 427 | # If an 'plot' OPERATION is found, changes name operation by the value of its type PARAMETER |
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424 | 428 | if self.type != 'self' and self.name == 'Plot': |
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425 | 429 | if parmConfObj.format == 'str' and parmConfObj.name == 'type': |
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426 | 430 | self.name = parmConfObj.value |
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427 | 431 | continue |
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428 | 432 | |
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429 | 433 | self.parmConfObjList.append(parmConfObj) |
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430 | 434 | |
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431 | 435 | def printattr(self): |
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432 | 436 | |
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433 | 437 | print '%s[%s]: name = %s, type = %s, priority = %s' % (self.ELEMENTNAME, |
|
|
434 | 438 | self.id, |
|
|
435 | 439 | self.name, |
|
|
436 | 440 | self.type, |
|
|
437 | 441 | self.priority) |
|
|
438 | 442 | |
|
|
439 | 443 | for parmConfObj in self.parmConfObjList: |
|
|
440 | 444 | parmConfObj.printattr() |
|
|
441 | 445 | |
|
|
442 | 446 | def createObject(self, plotter_queue=None): |
|
|
443 | 447 | |
|
|
444 | 448 | if self.type == 'self': |
|
|
445 | 449 | raise ValueError, 'This operation type cannot be created' |
|
|
446 | 450 | |
|
|
447 | 451 | if self.type == 'plotter': |
|
|
448 | 452 | if not plotter_queue: |
|
|
449 | 453 | raise ValueError, 'plotter_queue is not defined. Use:\nmyProject = Project()\nmyProject.setPlotterQueue(plotter_queue)' |
|
|
450 | 454 | |
|
|
451 | 455 | opObj = Plotter(self.name, plotter_queue) |
|
|
452 | 456 | |
|
|
453 | 457 | if self.type == 'external' or self.type == 'other': |
|
|
454 | 458 | |
|
|
455 | 459 | className = eval(self.name) |
|
|
456 | 460 | kwargs = self.getKwargs() |
|
|
457 | 461 | |
|
|
458 | 462 | opObj = className(**kwargs) |
|
|
459 | 463 | |
|
|
460 | 464 | return opObj |
|
|
461 | 465 | |
|
|
462 | 466 | |
|
|
463 | 467 | class ProcUnitConf(): |
|
|
464 | 468 | |
|
|
465 | 469 | id = None |
|
|
466 | 470 | name = None |
|
|
467 | 471 | datatype = None |
|
|
468 | 472 | inputId = None |
|
|
469 | 473 | parentId = None |
|
|
470 | 474 | |
|
|
471 | 475 | opConfObjList = [] |
|
|
472 | 476 | |
|
|
473 | 477 | procUnitObj = None |
|
|
474 | 478 | opObjList = [] |
|
|
475 | 479 | |
|
|
476 | 480 | ELEMENTNAME = 'ProcUnit' |
|
|
477 | 481 | |
|
|
478 | 482 | def __init__(self): |
|
|
479 | 483 | |
|
|
480 | 484 | self.id = None |
|
|
481 | 485 | self.datatype = None |
|
|
482 | 486 | self.name = None |
|
|
483 | 487 | self.inputId = None |
|
|
484 | 488 | |
|
|
485 | 489 | self.opConfObjList = [] |
|
|
486 | 490 | |
|
|
487 | 491 | self.procUnitObj = None |
|
|
488 | 492 | self.opObjDict = {} |
|
|
489 | 493 | |
|
|
490 | 494 | def __getPriority(self): |
|
|
491 | 495 | |
|
|
492 | 496 | return len(self.opConfObjList) + 1 |
|
|
493 | 497 | |
|
|
494 | 498 | def __getNewId(self): |
|
|
495 | 499 | |
|
|
496 | 500 | return int(self.id) * 10 + len(self.opConfObjList) + 1 |
|
|
497 | 501 | |
|
|
498 | 502 | def getElementName(self): |
|
|
499 | 503 | |
|
|
500 | 504 | return self.ELEMENTNAME |
|
|
501 | 505 | |
|
|
502 | 506 | def getId(self): |
|
|
503 | 507 | |
|
|
504 | 508 | return self.id |
|
|
505 | 509 | |
|
|
506 | 510 | def updateId(self, new_id, parentId=parentId): |
|
|
507 | 511 | |
|
|
508 | 512 | new_id = int(parentId) * 10 + (int(self.id) % 10) |
|
|
509 | 513 | new_inputId = int(parentId) * 10 + (int(self.inputId) % 10) |
|
|
510 | 514 | |
|
|
511 | 515 | # If this proc unit has not inputs |
|
|
512 | 516 | if self.inputId == '0': |
|
|
513 | 517 | new_inputId = 0 |
|
|
514 | 518 | |
|
|
515 | 519 | n = 1 |
|
|
516 | 520 | for opConfObj in self.opConfObjList: |
|
|
517 | 521 | |
|
|
518 | 522 | idOp = str(int(new_id) * 10 + n) |
|
|
519 | 523 | opConfObj.updateId(idOp) |
|
|
520 | 524 | |
|
|
521 | 525 | n += 1 |
|
|
522 | 526 | |
|
|
523 | 527 | self.parentId = str(parentId) |
|
|
524 | 528 | self.id = str(new_id) |
|
|
525 | 529 | self.inputId = str(new_inputId) |
|
|
526 | 530 | |
|
|
527 | 531 | def getInputId(self): |
|
|
528 | 532 | |
|
|
529 | 533 | return self.inputId |
|
|
530 | 534 | |
|
|
531 | 535 | def getOperationObjList(self): |
|
|
532 | 536 | |
|
|
533 | 537 | return self.opConfObjList |
|
|
534 | 538 | |
|
|
535 | 539 | def getOperationObj(self, name=None): |
|
|
536 | 540 | |
|
|
537 | 541 | for opConfObj in self.opConfObjList: |
|
|
538 | 542 | |
|
|
539 | 543 | if opConfObj.name != name: |
|
|
540 | 544 | continue |
|
|
541 | 545 | |
|
|
542 | 546 | return opConfObj |
|
|
543 | 547 | |
|
|
544 | 548 | return None |
|
|
545 | 549 | |
|
|
546 | 550 | def getOpObjfromParamValue(self, value=None): |
|
|
547 | 551 | |
|
|
548 | 552 | for opConfObj in self.opConfObjList: |
|
|
549 | 553 | if opConfObj.getParameterObjfromValue(parameterValue=value) != value: |
|
|
550 | 554 | continue |
|
|
551 | 555 | return opConfObj |
|
|
552 | 556 | return None |
|
|
553 | 557 | |
|
|
554 | 558 | def getProcUnitObj(self): |
|
|
555 | 559 | |
|
|
556 | 560 | return self.procUnitObj |
|
|
557 | 561 | |
|
|
558 | 562 | def setup(self, id, name, datatype, inputId, parentId=None): |
|
|
559 | 563 | |
|
|
560 | 564 | # Compatible with old signal chain version |
|
|
561 | 565 | if datatype == None and name == None: |
|
|
562 | 566 | raise ValueError, 'datatype or name should be defined' |
|
|
563 | 567 | |
|
|
564 | 568 | if name == None: |
|
|
565 | 569 | if 'Proc' in datatype: |
|
|
566 | 570 | name = datatype |
|
|
567 | 571 | else: |
|
|
568 | 572 | name = '%sProc' % (datatype) |
|
|
569 | 573 | |
|
|
570 | 574 | if datatype == None: |
|
|
571 | 575 | datatype = name.replace('Proc', '') |
|
|
572 | 576 | |
|
|
573 | 577 | self.id = str(id) |
|
|
574 | 578 | self.name = name |
|
|
575 | 579 | self.datatype = datatype |
|
|
576 | 580 | self.inputId = inputId |
|
|
577 | 581 | self.parentId = parentId |
|
|
578 | 582 | |
|
|
579 | 583 | self.opConfObjList = [] |
|
|
580 | 584 | |
|
|
581 | 585 | self.addOperation(name='run', optype='self') |
|
|
582 | 586 | |
|
|
583 | 587 | def removeOperations(self): |
|
|
584 | 588 | |
|
|
585 | 589 | for obj in self.opConfObjList: |
|
|
586 | 590 | del obj |
|
|
587 | 591 | |
|
|
588 | 592 | self.opConfObjList = [] |
|
|
589 | 593 | self.addOperation(name='run') |
|
|
590 | 594 | |
|
|
591 | 595 | def addParameter(self, **kwargs): |
|
|
592 | 596 | ''' |
|
|
593 | 597 | Add parameters to 'run' operation |
|
|
594 | 598 | ''' |
|
|
595 | 599 | opObj = self.opConfObjList[0] |
|
|
596 | 600 | |
|
|
597 | 601 | opObj.addParameter(**kwargs) |
|
|
598 | 602 | |
|
|
599 | 603 | return opObj |
|
|
600 | 604 | |
|
|
601 | 605 | def addOperation(self, name, optype='self'): |
|
|
602 | 606 | |
|
|
603 | 607 | id = self.__getNewId() |
|
|
604 | 608 | priority = self.__getPriority() |
|
|
605 | 609 | |
|
|
606 | 610 | opConfObj = OperationConf() |
|
|
607 | 611 | opConfObj.setup(id, name=name, priority=priority, type=optype) |
|
|
608 | 612 | |
|
|
609 | 613 | self.opConfObjList.append(opConfObj) |
|
|
610 | 614 | |
|
|
611 | 615 | return opConfObj |
|
|
612 | 616 | |
|
|
613 | 617 | def makeXml(self, projectElement): |
|
|
614 | 618 | |
|
|
615 | 619 | procUnitElement = SubElement(projectElement, self.ELEMENTNAME) |
|
|
616 | 620 | procUnitElement.set('id', str(self.id)) |
|
|
617 | 621 | procUnitElement.set('name', self.name) |
|
|
618 | 622 | procUnitElement.set('datatype', self.datatype) |
|
|
619 | 623 | procUnitElement.set('inputId', str(self.inputId)) |
|
|
620 | 624 | |
|
|
621 | 625 | for opConfObj in self.opConfObjList: |
|
|
622 | 626 | opConfObj.makeXml(procUnitElement) |
|
|
623 | 627 | |
|
|
624 | 628 | def readXml(self, upElement): |
|
|
625 | 629 | |
|
|
626 | 630 | self.id = upElement.get('id') |
|
|
627 | 631 | self.name = upElement.get('name') |
|
|
628 | 632 | self.datatype = upElement.get('datatype') |
|
|
629 | 633 | self.inputId = upElement.get('inputId') |
|
|
630 | 634 | |
|
|
631 | 635 | if self.ELEMENTNAME == 'ReadUnit': |
|
|
632 | 636 | self.datatype = self.datatype.replace('Reader', '') |
|
|
633 | 637 | |
|
|
634 | 638 | if self.ELEMENTNAME == 'ProcUnit': |
|
|
635 | 639 | self.datatype = self.datatype.replace('Proc', '') |
|
|
636 | 640 | |
|
|
637 | 641 | if self.inputId == 'None': |
|
|
638 | 642 | self.inputId = '0' |
|
|
639 | 643 | |
|
|
640 | 644 | self.opConfObjList = [] |
|
|
641 | 645 | |
|
|
642 | 646 | opElementList = upElement.iter(OperationConf().getElementName()) |
|
|
643 | 647 | |
|
|
644 | 648 | for opElement in opElementList: |
|
|
645 | 649 | opConfObj = OperationConf() |
|
|
646 | 650 | opConfObj.readXml(opElement) |
|
|
647 | 651 | self.opConfObjList.append(opConfObj) |
|
|
648 | 652 | |
|
|
649 | 653 | def printattr(self): |
|
|
650 | 654 | |
|
|
651 | 655 | print '%s[%s]: name = %s, datatype = %s, inputId = %s' % (self.ELEMENTNAME, |
|
|
652 | 656 | self.id, |
|
|
653 | 657 | self.name, |
|
|
654 | 658 | self.datatype, |
|
|
655 | 659 | self.inputId) |
|
|
656 | 660 | |
|
|
657 | 661 | for opConfObj in self.opConfObjList: |
|
|
658 | 662 | opConfObj.printattr() |
|
|
659 | 663 | |
|
|
660 | 664 | def getKwargs(self): |
|
|
661 | 665 | |
|
|
662 | 666 | opObj = self.opConfObjList[0] |
|
|
663 | 667 | kwargs = opObj.getKwargs() |
|
|
664 | 668 | |
|
|
665 | 669 | return kwargs |
|
|
666 | 670 | |
|
|
667 | 671 | def createObjects(self, plotter_queue=None): |
|
|
668 | 672 | |
|
|
669 | 673 | className = eval(self.name) |
|
|
670 | 674 | kwargs = self.getKwargs() |
|
|
671 | 675 | procUnitObj = className(**kwargs) |
|
|
672 | 676 | |
|
|
673 | 677 | for opConfObj in self.opConfObjList: |
|
|
674 | 678 | |
|
|
675 | 679 | if opConfObj.type == 'self' and self.name == 'run': |
|
|
676 | 680 | continue |
|
|
677 | 681 | elif opConfObj.type == 'self': |
|
|
678 | 682 | procUnitObj.addOperationKwargs( |
|
|
679 | 683 | opConfObj.id, **opConfObj.getKwargs()) |
|
|
680 | 684 | continue |
|
|
681 | 685 | |
|
|
682 | 686 | opObj = opConfObj.createObject(plotter_queue) |
|
|
683 | 687 | |
|
|
684 | 688 | self.opObjDict[opConfObj.id] = opObj |
|
|
685 | 689 | |
|
|
686 | 690 | procUnitObj.addOperation(opObj, opConfObj.id) |
|
|
687 | 691 | |
|
|
688 | 692 | self.procUnitObj = procUnitObj |
|
|
689 | 693 | |
|
|
690 | 694 | return procUnitObj |
|
|
691 | 695 | |
|
|
692 | 696 | def run(self): |
|
|
693 | 697 | |
|
|
694 | 698 | is_ok = False |
|
|
695 | 699 | |
|
|
696 | 700 | for opConfObj in self.opConfObjList: |
|
|
697 | 701 | |
|
|
698 | 702 | kwargs = {} |
|
|
699 | 703 | for parmConfObj in opConfObj.getParameterObjList(): |
|
|
700 | 704 | if opConfObj.name == 'run' and parmConfObj.name == 'datatype': |
|
|
701 | 705 | continue |
|
|
702 | 706 | |
|
|
703 | 707 | kwargs[parmConfObj.name] = parmConfObj.getValue() |
|
|
704 | 708 | |
|
|
705 | 709 | sts = self.procUnitObj.call(opType=opConfObj.type, |
|
|
706 | 710 | opName=opConfObj.name, |
|
|
707 | 711 | opId=opConfObj.id) |
|
|
708 | 712 | |
|
|
709 | 713 | is_ok = is_ok or sts |
|
|
710 | 714 | |
|
|
711 | 715 | return is_ok |
|
|
712 | 716 | |
|
|
713 | 717 | def close(self): |
|
|
714 | 718 | |
|
|
715 | 719 | for opConfObj in self.opConfObjList: |
|
|
716 | 720 | if opConfObj.type == 'self': |
|
|
717 | 721 | continue |
|
|
718 | 722 | |
|
|
719 | 723 | opObj = self.procUnitObj.getOperationObj(opConfObj.id) |
|
|
720 | 724 | opObj.close() |
|
|
721 | 725 | |
|
|
722 | 726 | self.procUnitObj.close() |
|
|
723 | 727 | |
|
|
724 | 728 | return |
|
|
725 | 729 | |
|
|
726 | 730 | |
|
|
727 | 731 | class ReadUnitConf(ProcUnitConf): |
|
|
728 | 732 | |
|
|
729 | 733 | path = None |
|
|
730 | 734 | startDate = None |
|
|
731 | 735 | endDate = None |
|
|
732 | 736 | startTime = None |
|
|
733 | 737 | endTime = None |
|
|
734 | 738 | |
|
|
735 | 739 | ELEMENTNAME = 'ReadUnit' |
|
|
736 | 740 | |
|
|
737 | 741 | def __init__(self): |
|
|
738 | 742 | |
|
|
739 | 743 | self.id = None |
|
|
740 | 744 | self.datatype = None |
|
|
741 | 745 | self.name = None |
|
|
742 | 746 | self.inputId = None |
|
|
743 | 747 | |
|
|
744 | 748 | self.parentId = None |
|
|
745 | 749 | |
|
|
746 | 750 | self.opConfObjList = [] |
|
|
747 | 751 | self.opObjList = [] |
|
|
748 | 752 | |
|
|
749 | 753 | def getElementName(self): |
|
|
750 | 754 | |
|
|
751 | 755 | return self.ELEMENTNAME |
|
|
752 | 756 | |
|
|
753 | 757 | def setup(self, id, name, datatype, path='', startDate='', endDate='', |
|
|
754 | 758 | startTime='', endTime='', parentId=None, server=None, **kwargs): |
|
|
755 | 759 | |
|
|
756 | 760 | # Compatible with old signal chain version |
|
|
757 | 761 | if datatype == None and name == None: |
|
|
758 | 762 | raise ValueError, 'datatype or name should be defined' |
|
|
759 | 763 | if name == None: |
|
|
760 | 764 | if 'Reader' in datatype: |
|
|
761 | 765 | name = datatype |
|
|
762 | 766 | datatype = name.replace('Reader','') |
|
|
763 | 767 | else: |
|
|
764 | 768 | name = '{}Reader'.format(datatype) |
|
|
765 | 769 | if datatype == None: |
|
|
766 | 770 | if 'Reader' in name: |
|
|
767 | 771 | datatype = name.replace('Reader','') |
|
|
768 | 772 | else: |
|
|
769 | 773 | datatype = name |
|
|
770 | 774 | name = '{}Reader'.format(name) |
|
|
771 | 775 | |
|
|
772 | 776 | self.id = id |
|
|
773 | 777 | self.name = name |
|
|
774 | 778 | self.datatype = datatype |
|
|
775 | 779 | if path != '': |
|
|
776 | 780 | self.path = os.path.abspath(path) |
|
|
777 | 781 | self.startDate = startDate |
|
|
778 | 782 | self.endDate = endDate |
|
|
779 | 783 | self.startTime = startTime |
|
|
780 | 784 | self.endTime = endTime |
|
|
781 | 785 | self.inputId = '0' |
|
|
782 | 786 | self.parentId = parentId |
|
|
783 | 787 | self.server = server |
|
|
784 | 788 | self.addRunOperation(**kwargs) |
|
|
785 | 789 | |
|
|
786 | 790 | def update(self, **kwargs): |
|
|
787 | 791 | |
|
|
788 | 792 | if 'datatype' in kwargs: |
|
|
789 | 793 | datatype = kwargs.pop('datatype') |
|
|
790 | 794 | if 'Reader' in datatype: |
|
|
791 | 795 | self.name = datatype |
|
|
792 | 796 | else: |
|
|
793 | 797 | self.name = '%sReader' % (datatype) |
|
|
794 | 798 | self.datatype = self.name.replace('Reader', '') |
|
|
795 | 799 | |
|
|
796 | 800 | attrs = ('path', 'startDate', 'endDate', |
|
|
797 | 801 | 'startTime', 'endTime', 'parentId') |
|
|
798 | 802 | |
|
|
799 | 803 | for attr in attrs: |
|
|
800 | 804 | if attr in kwargs: |
|
|
801 | 805 | setattr(self, attr, kwargs.pop(attr)) |
|
|
802 | 806 | |
|
|
803 | 807 | self.inputId = '0' |
|
|
804 | 808 | self.updateRunOperation(**kwargs) |
|
|
805 | 809 | |
|
|
806 | 810 | def removeOperations(self): |
|
|
807 | 811 | |
|
|
808 | 812 | for obj in self.opConfObjList: |
|
|
809 | 813 | del obj |
|
|
810 | 814 | |
|
|
811 | 815 | self.opConfObjList = [] |
|
|
812 | 816 | |
|
|
813 | 817 | def addRunOperation(self, **kwargs): |
|
|
814 | 818 | |
|
|
815 | 819 | opObj = self.addOperation(name='run', optype='self') |
|
|
816 | 820 | |
|
|
817 | 821 | if self.server is None: |
|
|
818 | 822 | opObj.addParameter( |
|
|
819 | 823 | name='datatype', value=self.datatype, format='str') |
|
|
820 | 824 | opObj.addParameter(name='path', value=self.path, format='str') |
|
|
821 | 825 | opObj.addParameter( |
|
|
822 | 826 | name='startDate', value=self.startDate, format='date') |
|
|
823 | 827 | opObj.addParameter( |
|
|
824 | 828 | name='endDate', value=self.endDate, format='date') |
|
|
825 | 829 | opObj.addParameter( |
|
|
826 | 830 | name='startTime', value=self.startTime, format='time') |
|
|
827 | 831 | opObj.addParameter( |
|
|
828 | 832 | name='endTime', value=self.endTime, format='time') |
|
|
829 | 833 | |
|
|
830 | 834 | for key, value in kwargs.items(): |
|
|
831 | 835 | opObj.addParameter(name=key, value=value, |
|
|
832 | 836 | format=type(value).__name__) |
|
|
833 | 837 | else: |
|
|
834 | 838 | opObj.addParameter(name='server', value=self.server, format='str') |
|
|
835 | 839 | |
|
|
836 | 840 | return opObj |
|
|
837 | 841 | |
|
|
838 | 842 | def updateRunOperation(self, **kwargs): |
|
|
839 | 843 | |
|
|
840 | 844 | opObj = self.getOperationObj(name='run') |
|
|
841 | 845 | opObj.removeParameters() |
|
|
842 | 846 | |
|
|
843 | 847 | opObj.addParameter(name='datatype', value=self.datatype, format='str') |
|
|
844 | 848 | opObj.addParameter(name='path', value=self.path, format='str') |
|
|
845 | 849 | opObj.addParameter( |
|
|
846 | 850 | name='startDate', value=self.startDate, format='date') |
|
|
847 | 851 | opObj.addParameter(name='endDate', value=self.endDate, format='date') |
|
|
848 | 852 | opObj.addParameter( |
|
|
849 | 853 | name='startTime', value=self.startTime, format='time') |
|
|
850 | 854 | opObj.addParameter(name='endTime', value=self.endTime, format='time') |
|
|
851 | 855 | |
|
|
852 | 856 | for key, value in kwargs.items(): |
|
|
853 | 857 | opObj.addParameter(name=key, value=value, |
|
|
854 | 858 | format=type(value).__name__) |
|
|
855 | 859 | |
|
|
856 | 860 | return opObj |
|
|
857 | 861 | |
|
|
858 | 862 | def readXml(self, upElement): |
|
|
859 | 863 | |
|
|
860 | 864 | self.id = upElement.get('id') |
|
|
861 | 865 | self.name = upElement.get('name') |
|
|
862 | 866 | self.datatype = upElement.get('datatype') |
|
|
863 | 867 | self.inputId = upElement.get('inputId') |
|
|
864 | 868 | |
|
|
865 | 869 | if self.ELEMENTNAME == 'ReadUnit': |
|
|
866 | 870 | self.datatype = self.datatype.replace('Reader', '') |
|
|
867 | 871 | |
|
|
868 | 872 | if self.inputId == 'None': |
|
|
869 | 873 | self.inputId = '0' |
|
|
870 | 874 | |
|
|
871 | 875 | self.opConfObjList = [] |
|
|
872 | 876 | |
|
|
873 | 877 | opElementList = upElement.iter(OperationConf().getElementName()) |
|
|
874 | 878 | |
|
|
875 | 879 | for opElement in opElementList: |
|
|
876 | 880 | opConfObj = OperationConf() |
|
|
877 | 881 | opConfObj.readXml(opElement) |
|
|
878 | 882 | self.opConfObjList.append(opConfObj) |
|
|
879 | 883 | |
|
|
880 | 884 | if opConfObj.name == 'run': |
|
|
881 | 885 | self.path = opConfObj.getParameterValue('path') |
|
|
882 | 886 | self.startDate = opConfObj.getParameterValue('startDate') |
|
|
883 | 887 | self.endDate = opConfObj.getParameterValue('endDate') |
|
|
884 | 888 | self.startTime = opConfObj.getParameterValue('startTime') |
|
|
885 | 889 | self.endTime = opConfObj.getParameterValue('endTime') |
|
|
886 | 890 | |
|
|
887 | 891 | |
|
|
888 | 892 | class Project(Process): |
|
|
889 | 893 | |
|
|
890 | 894 | id = None |
|
|
891 | 895 | # name = None |
|
|
892 | 896 | description = None |
|
|
893 | 897 | filename = None |
|
|
894 | 898 | |
|
|
895 | 899 | procUnitConfObjDict = None |
|
|
896 | 900 | |
|
|
897 | 901 | ELEMENTNAME = 'Project' |
|
|
898 | 902 | |
|
|
899 | 903 | plotterQueue = None |
|
|
900 | 904 | |
|
|
901 | 905 | def __init__(self, plotter_queue=None): |
|
|
902 | 906 | |
|
|
903 | 907 | Process.__init__(self) |
|
|
904 | 908 | self.id = None |
|
|
905 | 909 | # self.name = None |
|
|
906 | 910 | self.description = None |
|
|
907 | 911 | |
|
|
908 | 912 | self.plotterQueue = plotter_queue |
|
|
909 | 913 | |
|
|
910 | 914 | self.procUnitConfObjDict = {} |
|
|
911 | 915 | |
|
|
912 | 916 | def __getNewId(self): |
|
|
913 | 917 | |
|
|
914 | 918 | idList = self.procUnitConfObjDict.keys() |
|
|
915 | 919 | |
|
|
916 | 920 | id = int(self.id) * 10 |
|
|
917 | 921 | |
|
|
918 | 922 | while True: |
|
|
919 | 923 | id += 1 |
|
|
920 | 924 | |
|
|
921 | 925 | if str(id) in idList: |
|
|
922 | 926 | continue |
|
|
923 | 927 | |
|
|
924 | 928 | break |
|
|
925 | 929 | |
|
|
926 | 930 | return str(id) |
|
|
927 | 931 | |
|
|
928 | 932 | def getElementName(self): |
|
|
929 | 933 | |
|
|
930 | 934 | return self.ELEMENTNAME |
|
|
931 | 935 | |
|
|
932 | 936 | def getId(self): |
|
|
933 | 937 | |
|
|
934 | 938 | return self.id |
|
|
935 | 939 | |
|
|
936 | 940 | def updateId(self, new_id): |
|
|
937 | 941 | |
|
|
938 | 942 | self.id = str(new_id) |
|
|
939 | 943 | |
|
|
940 | 944 | keyList = self.procUnitConfObjDict.keys() |
|
|
941 | 945 | keyList.sort() |
|
|
942 | 946 | |
|
|
943 | 947 | n = 1 |
|
|
944 | 948 | newProcUnitConfObjDict = {} |
|
|
945 | 949 | |
|
|
946 | 950 | for procKey in keyList: |
|
|
947 | 951 | |
|
|
948 | 952 | procUnitConfObj = self.procUnitConfObjDict[procKey] |
|
|
949 | 953 | idProcUnit = str(int(self.id) * 10 + n) |
|
|
950 | 954 | procUnitConfObj.updateId(idProcUnit, parentId=self.id) |
|
|
951 | 955 | |
|
|
952 | 956 | newProcUnitConfObjDict[idProcUnit] = procUnitConfObj |
|
|
953 | 957 | n += 1 |
|
|
954 | 958 | |
|
|
955 | 959 | self.procUnitConfObjDict = newProcUnitConfObjDict |
|
|
956 | 960 | |
|
|
957 | 961 | def setup(self, id, name='', description=''): |
|
|
958 | 962 | |
|
|
959 | 963 | |
|
|
960 | 964 | print '*' * 60 |
|
|
961 | 965 | print ' Starting SIGNAL CHAIN PROCESSING v%s ' % schainpy.__version__ |
|
|
962 | 966 | print '*' * 60 |
|
|
963 | 967 | |
|
|
964 | 968 | self.id = str(id) |
|
|
965 | 969 | self.description = description |
|
|
966 | 970 | |
|
|
967 | 971 | def update(self, name, description): |
|
|
968 | 972 | |
|
|
969 | 973 | self.description = description |
|
|
970 | 974 | |
|
|
971 | 975 | def clone(self): |
|
|
972 | 976 | |
|
|
973 | 977 | p = Project() |
|
|
974 | 978 | p.procUnitConfObjDict = self.procUnitConfObjDict |
|
|
975 | 979 | return p |
|
|
976 | 980 | |
|
|
977 | 981 | def addReadUnit(self, id=None, datatype=None, name=None, **kwargs): |
|
|
978 | 982 | |
|
|
979 | 983 | if id is None: |
|
|
980 | 984 | idReadUnit = self.__getNewId() |
|
|
981 | 985 | else: |
|
|
982 | 986 | idReadUnit = str(id) |
|
|
983 | 987 | |
|
|
984 | 988 | readUnitConfObj = ReadUnitConf() |
|
|
985 | 989 | readUnitConfObj.setup(idReadUnit, name, datatype, |
|
|
986 | 990 | parentId=self.id, **kwargs) |
|
|
987 | 991 | |
|
|
988 | 992 | self.procUnitConfObjDict[readUnitConfObj.getId()] = readUnitConfObj |
|
|
989 | 993 | |
|
|
990 | 994 | return readUnitConfObj |
|
|
991 | 995 | |
|
|
992 | 996 | def addProcUnit(self, inputId='0', datatype=None, name=None): |
|
|
993 | 997 | |
|
|
994 | 998 | idProcUnit = self.__getNewId() |
|
|
995 | 999 | |
|
|
996 | 1000 | procUnitConfObj = ProcUnitConf() |
|
|
997 | 1001 | procUnitConfObj.setup(idProcUnit, name, datatype, |
|
|
998 | 1002 | inputId, parentId=self.id) |
|
|
999 | 1003 | |
|
|
1000 | 1004 | self.procUnitConfObjDict[procUnitConfObj.getId()] = procUnitConfObj |
|
|
1001 | 1005 | |
|
|
1002 | 1006 | return procUnitConfObj |
|
|
1003 | 1007 | |
|
|
1004 | 1008 | def removeProcUnit(self, id): |
|
|
1005 | 1009 | |
|
|
1006 | 1010 | if id in self.procUnitConfObjDict.keys(): |
|
|
1007 | 1011 | self.procUnitConfObjDict.pop(id) |
|
|
1008 | 1012 | |
|
|
1009 | 1013 | def getReadUnitId(self): |
|
|
1010 | 1014 | |
|
|
1011 | 1015 | readUnitConfObj = self.getReadUnitObj() |
|
|
1012 | 1016 | |
|
|
1013 | 1017 | return readUnitConfObj.id |
|
|
1014 | 1018 | |
|
|
1015 | 1019 | def getReadUnitObj(self): |
|
|
1016 | 1020 | |
|
|
1017 | 1021 | for obj in self.procUnitConfObjDict.values(): |
|
|
1018 | 1022 | if obj.getElementName() == 'ReadUnit': |
|
|
1019 | 1023 | return obj |
|
|
1020 | 1024 | |
|
|
1021 | 1025 | return None |
|
|
1022 | 1026 | |
|
|
1023 | 1027 | def getProcUnitObj(self, id=None, name=None): |
|
|
1024 | 1028 | |
|
|
1025 | 1029 | if id != None: |
|
|
1026 | 1030 | return self.procUnitConfObjDict[id] |
|
|
1027 | 1031 | |
|
|
1028 | 1032 | if name != None: |
|
|
1029 | 1033 | return self.getProcUnitObjByName(name) |
|
|
1030 | 1034 | |
|
|
1031 | 1035 | return None |
|
|
1032 | 1036 | |
|
|
1033 | 1037 | def getProcUnitObjByName(self, name): |
|
|
1034 | 1038 | |
|
|
1035 | 1039 | for obj in self.procUnitConfObjDict.values(): |
|
|
1036 | 1040 | if obj.name == name: |
|
|
1037 | 1041 | return obj |
|
|
1038 | 1042 | |
|
|
1039 | 1043 | return None |
|
|
1040 | 1044 | |
|
|
1041 | 1045 | def procUnitItems(self): |
|
|
1042 | 1046 | |
|
|
1043 | 1047 | return self.procUnitConfObjDict.items() |
|
|
1044 | 1048 | |
|
|
1045 | 1049 | def makeXml(self): |
|
|
1046 | 1050 | |
|
|
1047 | 1051 | projectElement = Element('Project') |
|
|
1048 | 1052 | projectElement.set('id', str(self.id)) |
|
|
1049 | 1053 | projectElement.set('name', self.name) |
|
|
1050 | 1054 | projectElement.set('description', self.description) |
|
|
1051 | 1055 | |
|
|
1052 | 1056 | for procUnitConfObj in self.procUnitConfObjDict.values(): |
|
|
1053 | 1057 | procUnitConfObj.makeXml(projectElement) |
|
|
1054 | 1058 | |
|
|
1055 | 1059 | self.projectElement = projectElement |
|
|
1056 | 1060 | |
|
|
1057 | 1061 | def writeXml(self, filename=None): |
|
|
1058 | 1062 | |
|
|
1059 | 1063 | if filename == None: |
|
|
1060 | 1064 | if self.filename: |
|
|
1061 | 1065 | filename = self.filename |
|
|
1062 | 1066 | else: |
|
|
1063 | 1067 | filename = 'schain.xml' |
|
|
1064 | 1068 | |
|
|
1065 | 1069 | if not filename: |
|
|
1066 | 1070 | print 'filename has not been defined. Use setFilename(filename) for do it.' |
|
|
1067 | 1071 | return 0 |
|
|
1068 | 1072 | |
|
|
1069 | 1073 | abs_file = os.path.abspath(filename) |
|
|
1070 | 1074 | |
|
|
1071 | 1075 | if not os.access(os.path.dirname(abs_file), os.W_OK): |
|
|
1072 | 1076 | print 'No write permission on %s' % os.path.dirname(abs_file) |
|
|
1073 | 1077 | return 0 |
|
|
1074 | 1078 | |
|
|
1075 | 1079 | if os.path.isfile(abs_file) and not(os.access(abs_file, os.W_OK)): |
|
|
1076 | 1080 | print 'File %s already exists and it could not be overwriten' % abs_file |
|
|
1077 | 1081 | return 0 |
|
|
1078 | 1082 | |
|
|
1079 | 1083 | self.makeXml() |
|
|
1080 | 1084 | |
|
|
1081 | 1085 | ElementTree(self.projectElement).write(abs_file, method='xml') |
|
|
1082 | 1086 | |
|
|
1083 | 1087 | self.filename = abs_file |
|
|
1084 | 1088 | |
|
|
1085 | 1089 | return 1 |
|
|
1086 | 1090 | |
|
|
1087 | 1091 | def readXml(self, filename=None): |
|
|
1088 | 1092 | |
|
|
1089 | 1093 | if not filename: |
|
|
1090 | 1094 | print 'filename is not defined' |
|
|
1091 | 1095 | return 0 |
|
|
1092 | 1096 | |
|
|
1093 | 1097 | abs_file = os.path.abspath(filename) |
|
|
1094 | 1098 | |
|
|
1095 | 1099 | if not os.path.isfile(abs_file): |
|
|
1096 | 1100 | print '%s file does not exist' % abs_file |
|
|
1097 | 1101 | return 0 |
|
|
1098 | 1102 | |
|
|
1099 | 1103 | self.projectElement = None |
|
|
1100 | 1104 | self.procUnitConfObjDict = {} |
|
|
1101 | 1105 | |
|
|
1102 | 1106 | try: |
|
|
1103 | 1107 | self.projectElement = ElementTree().parse(abs_file) |
|
|
1104 | 1108 | except: |
|
|
1105 | 1109 | print 'Error reading %s, verify file format' % filename |
|
|
1106 | 1110 | return 0 |
|
|
1107 | 1111 | |
|
|
1108 | 1112 | self.project = self.projectElement.tag |
|
|
1109 | 1113 | |
|
|
1110 | 1114 | self.id = self.projectElement.get('id') |
|
|
1111 | 1115 | self.name = self.projectElement.get('name') |
|
|
1112 | 1116 | self.description = self.projectElement.get('description') |
|
|
1113 | 1117 | |
|
|
1114 | 1118 | readUnitElementList = self.projectElement.iter( |
|
|
1115 | 1119 | ReadUnitConf().getElementName()) |
|
|
1116 | 1120 | |
|
|
1117 | 1121 | for readUnitElement in readUnitElementList: |
|
|
1118 | 1122 | readUnitConfObj = ReadUnitConf() |
|
|
1119 | 1123 | readUnitConfObj.readXml(readUnitElement) |
|
|
1120 | 1124 | |
|
|
1121 | 1125 | if readUnitConfObj.parentId == None: |
|
|
1122 | 1126 | readUnitConfObj.parentId = self.id |
|
|
1123 | 1127 | |
|
|
1124 | 1128 | self.procUnitConfObjDict[readUnitConfObj.getId()] = readUnitConfObj |
|
|
1125 | 1129 | |
|
|
1126 | 1130 | procUnitElementList = self.projectElement.iter( |
|
|
1127 | 1131 | ProcUnitConf().getElementName()) |
|
|
1128 | 1132 | |
|
|
1129 | 1133 | for procUnitElement in procUnitElementList: |
|
|
1130 | 1134 | procUnitConfObj = ProcUnitConf() |
|
|
1131 | 1135 | procUnitConfObj.readXml(procUnitElement) |
|
|
1132 | 1136 | |
|
|
1133 | 1137 | if procUnitConfObj.parentId == None: |
|
|
1134 | 1138 | procUnitConfObj.parentId = self.id |
|
|
1135 | 1139 | |
|
|
1136 | 1140 | self.procUnitConfObjDict[procUnitConfObj.getId()] = procUnitConfObj |
|
|
1137 | 1141 | |
|
|
1138 | 1142 | self.filename = abs_file |
|
|
1139 | 1143 | |
|
|
1140 | 1144 | return 1 |
|
|
1141 | 1145 | |
|
|
1142 | 1146 | def printattr(self): |
|
|
1143 | 1147 | |
|
|
1144 | 1148 | print 'Project[%s]: name = %s, description = %s' % (self.id, |
|
|
1145 | 1149 | self.name, |
|
|
1146 | 1150 | self.description) |
|
|
1147 | 1151 | |
|
|
1148 | 1152 | for procUnitConfObj in self.procUnitConfObjDict.values(): |
|
|
1149 | 1153 | procUnitConfObj.printattr() |
|
|
1150 | 1154 | |
|
|
1151 | 1155 | def createObjects(self): |
|
|
1152 | 1156 | |
|
|
1153 | 1157 | for procUnitConfObj in self.procUnitConfObjDict.values(): |
|
|
1154 | 1158 | procUnitConfObj.createObjects(self.plotterQueue) |
|
|
1155 | 1159 | |
|
|
1156 | 1160 | def __connect(self, objIN, thisObj): |
|
|
1157 | 1161 | |
|
|
1158 | 1162 | thisObj.setInput(objIN.getOutputObj()) |
|
|
1159 | 1163 | |
|
|
1160 | 1164 | def connectObjects(self): |
|
|
1161 | 1165 | |
|
|
1162 | 1166 | for thisPUConfObj in self.procUnitConfObjDict.values(): |
|
|
1163 | 1167 | |
|
|
1164 | 1168 | inputId = thisPUConfObj.getInputId() |
|
|
1165 | 1169 | |
|
|
1166 | 1170 | if int(inputId) == 0: |
|
|
1167 | 1171 | continue |
|
|
1168 | 1172 | |
|
|
1169 | 1173 | # Get input object |
|
|
1170 | 1174 | puConfINObj = self.procUnitConfObjDict[inputId] |
|
|
1171 | 1175 | puObjIN = puConfINObj.getProcUnitObj() |
|
|
1172 | 1176 | |
|
|
1173 | 1177 | # Get current object |
|
|
1174 | 1178 | thisPUObj = thisPUConfObj.getProcUnitObj() |
|
|
1175 | 1179 | |
|
|
1176 | 1180 | self.__connect(puObjIN, thisPUObj) |
|
|
1177 | 1181 | |
|
|
1178 | 1182 | def __handleError(self, procUnitConfObj, send_email=False): |
|
|
1179 | 1183 | |
|
|
1180 | 1184 | import socket |
|
|
1181 | 1185 | |
|
|
1182 | 1186 | err = traceback.format_exception(sys.exc_info()[0], |
|
|
1183 | 1187 | sys.exc_info()[1], |
|
|
1184 | 1188 | sys.exc_info()[2]) |
|
|
1185 | 1189 | |
|
|
1186 | 1190 | print '***** Error occurred in %s *****' % (procUnitConfObj.name) |
|
|
1187 | 1191 | print '***** %s' % err[-1] |
|
|
1188 | 1192 | |
|
|
1189 | 1193 | message = ''.join(err) |
|
|
1190 | 1194 | |
|
|
1191 | 1195 | sys.stderr.write(message) |
|
|
1192 | 1196 | |
|
|
1193 | 1197 | if not send_email: |
|
|
1194 | 1198 | return |
|
|
1195 | 1199 | |
|
|
1196 | 1200 | subject = 'SChain v%s: Error running %s\n' % ( |
|
|
1197 | 1201 | schainpy.__version__, procUnitConfObj.name) |
|
|
1198 | 1202 | |
|
|
1199 | 1203 | subtitle = '%s: %s\n' % ( |
|
|
1200 | 1204 | procUnitConfObj.getElementName(), procUnitConfObj.name) |
|
|
1201 | 1205 | subtitle += 'Hostname: %s\n' % socket.gethostbyname( |
|
|
1202 | 1206 | socket.gethostname()) |
|
|
1203 | 1207 | subtitle += 'Working directory: %s\n' % os.path.abspath('./') |
|
|
1204 | 1208 | subtitle += 'Configuration file: %s\n' % self.filename |
|
|
1205 | 1209 | subtitle += 'Time: %s\n' % str(datetime.datetime.now()) |
|
|
1206 | 1210 | |
|
|
1207 | 1211 | readUnitConfObj = self.getReadUnitObj() |
|
|
1208 | 1212 | if readUnitConfObj: |
|
|
1209 | 1213 | subtitle += '\nInput parameters:\n' |
|
|
1210 | 1214 | subtitle += '[Data path = %s]\n' % readUnitConfObj.path |
|
|
1211 | 1215 | subtitle += '[Data type = %s]\n' % readUnitConfObj.datatype |
|
|
1212 | 1216 | subtitle += '[Start date = %s]\n' % readUnitConfObj.startDate |
|
|
1213 | 1217 | subtitle += '[End date = %s]\n' % readUnitConfObj.endDate |
|
|
1214 | 1218 | subtitle += '[Start time = %s]\n' % readUnitConfObj.startTime |
|
|
1215 | 1219 | subtitle += '[End time = %s]\n' % readUnitConfObj.endTime |
|
|
1216 | 1220 | |
|
|
1217 | 1221 | adminObj = schainpy.admin.SchainNotify() |
|
|
1218 | 1222 | adminObj.sendAlert(message=message, |
|
|
1219 | 1223 | subject=subject, |
|
|
1220 | 1224 | subtitle=subtitle, |
|
|
1221 | 1225 | filename=self.filename) |
|
|
1222 | 1226 | |
|
|
1223 | 1227 | def isPaused(self): |
|
|
1224 | 1228 | return 0 |
|
|
1225 | 1229 | |
|
|
1226 | 1230 | def isStopped(self): |
|
|
1227 | 1231 | return 0 |
|
|
1228 | 1232 | |
|
|
1229 | 1233 | def runController(self): |
|
|
1230 | 1234 | ''' |
|
|
1231 | 1235 | returns 0 when this process has been stopped, 1 otherwise |
|
|
1232 | 1236 | ''' |
|
|
1233 | 1237 | |
|
|
1234 | 1238 | if self.isPaused(): |
|
|
1235 | 1239 | print 'Process suspended' |
|
|
1236 | 1240 | |
|
|
1237 | 1241 | while True: |
|
|
1238 | 1242 | time.sleep(0.1) |
|
|
1239 | 1243 | |
|
|
1240 | 1244 | if not self.isPaused(): |
|
|
1241 | 1245 | break |
|
|
1242 | 1246 | |
|
|
1243 | 1247 | if self.isStopped(): |
|
|
1244 | 1248 | break |
|
|
1245 | 1249 | |
|
|
1246 | 1250 | print 'Process reinitialized' |
|
|
1247 | 1251 | |
|
|
1248 | 1252 | if self.isStopped(): |
|
|
1249 | 1253 | print 'Process stopped' |
|
|
1250 | 1254 | return 0 |
|
|
1251 | 1255 | |
|
|
1252 | 1256 | return 1 |
|
|
1253 | 1257 | |
|
|
1254 | 1258 | def setFilename(self, filename): |
|
|
1255 | 1259 | |
|
|
1256 | 1260 | self.filename = filename |
|
|
1257 | 1261 | |
|
|
1258 | 1262 | def setPlotterQueue(self, plotter_queue): |
|
|
1259 | 1263 | |
|
|
1260 | 1264 | raise NotImplementedError, 'Use schainpy.controller_api.ControllerThread instead Project class' |
|
|
1261 | 1265 | |
|
|
1262 | 1266 | def getPlotterQueue(self): |
|
|
1263 | 1267 | |
|
|
1264 | 1268 | raise NotImplementedError, 'Use schainpy.controller_api.ControllerThread instead Project class' |
|
|
1265 | 1269 | |
|
|
1266 | 1270 | def useExternalPlotter(self): |
|
|
1267 | 1271 | |
|
|
1268 | 1272 | raise NotImplementedError, 'Use schainpy.controller_api.ControllerThread instead Project class' |
|
|
1269 | 1273 | |
|
|
1270 | 1274 | def run(self): |
|
|
1271 | 1275 | |
|
|
1272 | 1276 | log.success('Starting {}'.format(self.name)) |
|
|
1273 | ||
|
|
1277 | self.start_time = time.time() | |
|
|
1274 | 1278 | self.createObjects() |
|
|
1275 | 1279 | self.connectObjects() |
|
|
1276 | 1280 | |
|
|
1277 | 1281 | keyList = self.procUnitConfObjDict.keys() |
|
|
1278 | 1282 | keyList.sort() |
|
|
1279 | 1283 | |
|
|
1280 | 1284 | while(True): |
|
|
1281 | 1285 | |
|
|
1282 | 1286 | is_ok = False |
|
|
1283 | 1287 | |
|
|
1284 | 1288 | for procKey in keyList: |
|
|
1285 | 1289 | |
|
|
1286 | 1290 | procUnitConfObj = self.procUnitConfObjDict[procKey] |
|
|
1287 | 1291 | |
|
|
1288 | 1292 | try: |
|
|
1289 | 1293 | sts = procUnitConfObj.run() |
|
|
1290 | 1294 | is_ok = is_ok or sts |
|
|
1291 | 1295 | except KeyboardInterrupt: |
|
|
1292 | 1296 | is_ok = False |
|
|
1293 | 1297 | break |
|
|
1294 | 1298 | except ValueError, e: |
|
|
1295 | 1299 | time.sleep(0.5) |
|
|
1296 | 1300 | self.__handleError(procUnitConfObj, send_email=True) |
|
|
1297 | 1301 | is_ok = False |
|
|
1298 | 1302 | break |
|
|
1299 | 1303 | except: |
|
|
1300 | 1304 | time.sleep(0.5) |
|
|
1301 | 1305 | self.__handleError(procUnitConfObj) |
|
|
1302 | 1306 | is_ok = False |
|
|
1303 | 1307 | break |
|
|
1304 | 1308 | |
|
|
1305 | 1309 | # If every process unit finished so end process |
|
|
1306 | 1310 | if not(is_ok): |
|
|
1307 | 1311 | break |
|
|
1308 | 1312 | |
|
|
1309 | 1313 | if not self.runController(): |
|
|
1310 | 1314 | break |
|
|
1311 | 1315 | |
|
|
1312 | 1316 | # Closing every process |
|
|
1313 | 1317 | for procKey in keyList: |
|
|
1314 | 1318 | procUnitConfObj = self.procUnitConfObjDict[procKey] |
|
|
1315 | 1319 | procUnitConfObj.close() |
|
|
1316 | 1320 | |
|
|
1317 |
log.success('{} finished'.format( |
|
|
|
1321 | log.success('{} finished (time: {}s)'.format( | |
|
|
1322 | self.name, | |
|
|
1323 | time.time()-self.start_time)) | |
| @@ -1,876 +1,876 | |||
|
|
1 | 1 | ''' |
|
|
2 | 2 | |
|
|
3 | 3 | $Author: murco $ |
|
|
4 | 4 | $Id: JROHeaderIO.py 151 2012-10-31 19:00:51Z murco $ |
|
|
5 | 5 | ''' |
|
|
6 | 6 | import sys |
|
|
7 | 7 | import numpy |
|
|
8 | 8 | import copy |
|
|
9 | 9 | import datetime |
|
|
10 | 10 | import inspect |
|
|
11 | 11 | |
|
|
12 | 12 | SPEED_OF_LIGHT = 299792458 |
|
|
13 | 13 | SPEED_OF_LIGHT = 3e8 |
|
|
14 | 14 | |
|
|
15 | 15 | BASIC_STRUCTURE = numpy.dtype([ |
|
|
16 | 16 | ('nSize','<u4'), |
|
|
17 | 17 | ('nVersion','<u2'), |
|
|
18 | 18 | ('nDataBlockId','<u4'), |
|
|
19 | 19 | ('nUtime','<u4'), |
|
|
20 | 20 | ('nMilsec','<u2'), |
|
|
21 | 21 | ('nTimezone','<i2'), |
|
|
22 | 22 | ('nDstflag','<i2'), |
|
|
23 | 23 | ('nErrorCount','<u4') |
|
|
24 | 24 | ]) |
|
|
25 | 25 | |
|
|
26 | 26 | SYSTEM_STRUCTURE = numpy.dtype([ |
|
|
27 | 27 | ('nSize','<u4'), |
|
|
28 | 28 | ('nNumSamples','<u4'), |
|
|
29 | 29 | ('nNumProfiles','<u4'), |
|
|
30 | 30 | ('nNumChannels','<u4'), |
|
|
31 | 31 | ('nADCResolution','<u4'), |
|
|
32 | 32 | ('nPCDIOBusWidth','<u4'), |
|
|
33 | 33 | ]) |
|
|
34 | 34 | |
|
|
35 | 35 | RADAR_STRUCTURE = numpy.dtype([ |
|
|
36 | 36 | ('nSize','<u4'), |
|
|
37 | 37 | ('nExpType','<u4'), |
|
|
38 | 38 | ('nNTx','<u4'), |
|
|
39 | 39 | ('fIpp','<f4'), |
|
|
40 | 40 | ('fTxA','<f4'), |
|
|
41 | 41 | ('fTxB','<f4'), |
|
|
42 | 42 | ('nNumWindows','<u4'), |
|
|
43 | 43 | ('nNumTaus','<u4'), |
|
|
44 | 44 | ('nCodeType','<u4'), |
|
|
45 | 45 | ('nLine6Function','<u4'), |
|
|
46 | 46 | ('nLine5Function','<u4'), |
|
|
47 | 47 | ('fClock','<f4'), |
|
|
48 | 48 | ('nPrePulseBefore','<u4'), |
|
|
49 | 49 | ('nPrePulseAfter','<u4'), |
|
|
50 | 50 | ('sRangeIPP','<a20'), |
|
|
51 | 51 | ('sRangeTxA','<a20'), |
|
|
52 | 52 | ('sRangeTxB','<a20'), |
|
|
53 | 53 | ]) |
|
|
54 | 54 | |
|
|
55 | 55 | SAMPLING_STRUCTURE = numpy.dtype([('h0','<f4'),('dh','<f4'),('nsa','<u4')]) |
|
|
56 | 56 | |
|
|
57 | 57 | |
|
|
58 | 58 | PROCESSING_STRUCTURE = numpy.dtype([ |
|
|
59 | 59 | ('nSize','<u4'), |
|
|
60 | 60 | ('nDataType','<u4'), |
|
|
61 | 61 | ('nSizeOfDataBlock','<u4'), |
|
|
62 | 62 | ('nProfilesperBlock','<u4'), |
|
|
63 | 63 | ('nDataBlocksperFile','<u4'), |
|
|
64 | 64 | ('nNumWindows','<u4'), |
|
|
65 | 65 | ('nProcessFlags','<u4'), |
|
|
66 | 66 | ('nCoherentIntegrations','<u4'), |
|
|
67 | 67 | ('nIncoherentIntegrations','<u4'), |
|
|
68 | 68 | ('nTotalSpectra','<u4') |
|
|
69 | 69 | ]) |
|
|
70 | 70 | |
|
|
71 | 71 | class Header(object): |
|
|
72 | 72 | |
|
|
73 | 73 | def __init__(self): |
|
|
74 | 74 | raise NotImplementedError |
|
|
75 | 75 | |
|
|
76 | 76 | def copy(self): |
|
|
77 | 77 | return copy.deepcopy(self) |
|
|
78 | 78 | |
|
|
79 | 79 | def read(self): |
|
|
80 | 80 | |
|
|
81 | 81 | raise NotImplementedError |
|
|
82 | 82 | |
|
|
83 | 83 | def write(self): |
|
|
84 | 84 | |
|
|
85 | 85 | raise NotImplementedError |
|
|
86 | 86 | |
|
|
87 | 87 | def getAllowedArgs(self): |
|
|
88 | 88 | args = inspect.getargspec(self.__init__).args |
|
|
89 | 89 | try: |
|
|
90 | 90 | args.remove('self') |
|
|
91 | 91 | except: |
|
|
92 | 92 | pass |
|
|
93 | 93 | return args |
|
|
94 | 94 | |
|
|
95 | 95 | def getAsDict(self): |
|
|
96 | 96 | args = self.getAllowedArgs() |
|
|
97 | 97 | asDict = {} |
|
|
98 | 98 | for x in args: |
|
|
99 | 99 | asDict[x] = self[x] |
|
|
100 | 100 | return asDict |
|
|
101 | 101 | |
|
|
102 | 102 | def __getitem__(self, name): |
|
|
103 | 103 | return getattr(self, name) |
|
|
104 | 104 | |
|
|
105 | 105 | def printInfo(self): |
|
|
106 | 106 | |
|
|
107 | 107 | message = "#"*50 + "\n" |
|
|
108 | 108 | message += self.__class__.__name__.upper() + "\n" |
|
|
109 | 109 | message += "#"*50 + "\n" |
|
|
110 | 110 | |
|
|
111 | 111 | keyList = self.__dict__.keys() |
|
|
112 | 112 | keyList.sort() |
|
|
113 | 113 | |
|
|
114 | 114 | for key in keyList: |
|
|
115 | 115 | message += "%s = %s" %(key, self.__dict__[key]) + "\n" |
|
|
116 | 116 | |
|
|
117 | 117 | if "size" not in keyList: |
|
|
118 | 118 | attr = getattr(self, "size") |
|
|
119 | 119 | |
|
|
120 | 120 | if attr: |
|
|
121 | 121 | message += "%s = %s" %("size", attr) + "\n" |
|
|
122 | 122 | |
|
|
123 | 123 | print message |
|
|
124 | 124 | |
|
|
125 | 125 | class BasicHeader(Header): |
|
|
126 | 126 | |
|
|
127 | 127 | size = None |
|
|
128 | 128 | version = None |
|
|
129 | 129 | dataBlock = None |
|
|
130 | 130 | utc = None |
|
|
131 | 131 | ltc = None |
|
|
132 | 132 | miliSecond = None |
|
|
133 | 133 | timeZone = None |
|
|
134 | 134 | dstFlag = None |
|
|
135 | 135 | errorCount = None |
|
|
136 | 136 | datatime = None |
|
|
137 | 137 | structure = BASIC_STRUCTURE |
|
|
138 | 138 | __LOCALTIME = None |
|
|
139 | 139 | |
|
|
140 | 140 | def __init__(self, useLocalTime=True): |
|
|
141 | 141 | |
|
|
142 | 142 | self.size = 24 |
|
|
143 | 143 | self.version = 0 |
|
|
144 | 144 | self.dataBlock = 0 |
|
|
145 | 145 | self.utc = 0 |
|
|
146 | 146 | self.miliSecond = 0 |
|
|
147 | 147 | self.timeZone = 0 |
|
|
148 | 148 | self.dstFlag = 0 |
|
|
149 | 149 | self.errorCount = 0 |
|
|
150 | 150 | |
|
|
151 | 151 | self.useLocalTime = useLocalTime |
|
|
152 | 152 | |
|
|
153 | 153 | def read(self, fp): |
|
|
154 | 154 | |
|
|
155 | 155 | self.length = 0 |
|
|
156 | 156 | try: |
|
|
157 | 157 | if hasattr(fp, 'read'): |
|
|
158 | 158 | header = numpy.fromfile(fp, BASIC_STRUCTURE,1) |
|
|
159 | 159 | else: |
|
|
160 | 160 | header = numpy.fromstring(fp, BASIC_STRUCTURE,1) |
|
|
161 | 161 | except Exception, e: |
|
|
162 | 162 | print "BasicHeader: " |
|
|
163 | 163 | print e |
|
|
164 | 164 | return 0 |
|
|
165 | 165 | |
|
|
166 | 166 | self.size = int(header['nSize'][0]) |
|
|
167 | 167 | self.version = int(header['nVersion'][0]) |
|
|
168 | 168 | self.dataBlock = int(header['nDataBlockId'][0]) |
|
|
169 | 169 | self.utc = int(header['nUtime'][0]) |
|
|
170 | 170 | self.miliSecond = int(header['nMilsec'][0]) |
|
|
171 | 171 | self.timeZone = int(header['nTimezone'][0]) |
|
|
172 | 172 | self.dstFlag = int(header['nDstflag'][0]) |
|
|
173 | 173 | self.errorCount = int(header['nErrorCount'][0]) |
|
|
174 | 174 | |
|
|
175 | 175 | if self.size < 24: |
|
|
176 | 176 | return 0 |
|
|
177 | 177 | |
|
|
178 | 178 | self.length = header.nbytes |
|
|
179 | 179 | return 1 |
|
|
180 | 180 | |
|
|
181 | 181 | def write(self, fp): |
|
|
182 | 182 | |
|
|
183 | 183 | headerTuple = (self.size,self.version,self.dataBlock,self.utc,self.miliSecond,self.timeZone,self.dstFlag,self.errorCount) |
|
|
184 | 184 | header = numpy.array(headerTuple, BASIC_STRUCTURE) |
|
|
185 | 185 | header.tofile(fp) |
|
|
186 | 186 | |
|
|
187 | 187 | return 1 |
|
|
188 | 188 | |
|
|
189 | 189 | def get_ltc(self): |
|
|
190 | 190 | |
|
|
191 | 191 | return self.utc - self.timeZone*60 |
|
|
192 | 192 | |
|
|
193 | 193 | def set_ltc(self, value): |
|
|
194 | 194 | |
|
|
195 | 195 | self.utc = value + self.timeZone*60 |
|
|
196 | 196 | |
|
|
197 | 197 | def get_datatime(self): |
|
|
198 | 198 | |
|
|
199 | 199 | return datetime.datetime.utcfromtimestamp(self.ltc) |
|
|
200 | 200 | |
|
|
201 | 201 | ltc = property(get_ltc, set_ltc) |
|
|
202 | 202 | datatime = property(get_datatime) |
|
|
203 | 203 | |
|
|
204 | 204 | class SystemHeader(Header): |
|
|
205 | 205 | |
|
|
206 | 206 | size = None |
|
|
207 | 207 | nSamples = None |
|
|
208 | 208 | nProfiles = None |
|
|
209 | 209 | nChannels = None |
|
|
210 | 210 | adcResolution = None |
|
|
211 | 211 | pciDioBusWidth = None |
|
|
212 | 212 | structure = SYSTEM_STRUCTURE |
|
|
213 | 213 | |
|
|
214 | 214 | def __init__(self, nSamples=0, nProfiles=0, nChannels=0, adcResolution=14, pciDioBusWidth=0): |
|
|
215 | 215 | |
|
|
216 | 216 | self.size = 24 |
|
|
217 | 217 | self.nSamples = nSamples |
|
|
218 | 218 | self.nProfiles = nProfiles |
|
|
219 | 219 | self.nChannels = nChannels |
|
|
220 | 220 | self.adcResolution = adcResolution |
|
|
221 | 221 | self.pciDioBusWidth = pciDioBusWidth |
|
|
222 | 222 | |
|
|
223 | 223 | def read(self, fp): |
|
|
224 | 224 | self.length = 0 |
|
|
225 | 225 | try: |
|
|
226 | 226 | startFp = fp.tell() |
|
|
227 | 227 | except Exception, e: |
|
|
228 | 228 | startFp = None |
|
|
229 | 229 | pass |
|
|
230 | 230 | |
|
|
231 | 231 | try: |
|
|
232 | 232 | if hasattr(fp, 'read'): |
|
|
233 | 233 | header = numpy.fromfile(fp, SYSTEM_STRUCTURE,1) |
|
|
234 | 234 | else: |
|
|
235 | 235 | header = numpy.fromstring(fp, SYSTEM_STRUCTURE,1) |
|
|
236 | 236 | except Exception, e: |
|
|
237 | 237 | print "System Header: " + str(e) |
|
|
238 | 238 | return 0 |
|
|
239 | 239 | |
|
|
240 | 240 | self.size = header['nSize'][0] |
|
|
241 | 241 | self.nSamples = header['nNumSamples'][0] |
|
|
242 | 242 | self.nProfiles = header['nNumProfiles'][0] |
|
|
243 | 243 | self.nChannels = header['nNumChannels'][0] |
|
|
244 | 244 | self.adcResolution = header['nADCResolution'][0] |
|
|
245 | 245 | self.pciDioBusWidth = header['nPCDIOBusWidth'][0] |
|
|
246 | 246 | |
|
|
247 | 247 | |
|
|
248 | 248 | if startFp is not None: |
|
|
249 | 249 | endFp = self.size + startFp |
|
|
250 | 250 | |
|
|
251 | 251 | if fp.tell() > endFp: |
|
|
252 | 252 | sys.stderr.write("Warning %s: Size value read from System Header is lower than it has to be\n" %fp.name) |
|
|
253 | 253 | return 0 |
|
|
254 | 254 | |
|
|
255 | 255 | if fp.tell() < endFp: |
|
|
256 | 256 | sys.stderr.write("Warning %s: Size value read from System Header size is greater than it has to be\n" %fp.name) |
|
|
257 | 257 | return 0 |
|
|
258 | 258 | |
|
|
259 | 259 | self.length = header.nbytes |
|
|
260 | 260 | return 1 |
|
|
261 | 261 | |
|
|
262 | 262 | def write(self, fp): |
|
|
263 | 263 | |
|
|
264 | 264 | headerTuple = (self.size,self.nSamples,self.nProfiles,self.nChannels,self.adcResolution,self.pciDioBusWidth) |
|
|
265 | 265 | header = numpy.array(headerTuple,SYSTEM_STRUCTURE) |
|
|
266 | 266 | header.tofile(fp) |
|
|
267 | 267 | |
|
|
268 | 268 | return 1 |
|
|
269 | 269 | |
|
|
270 | 270 | class RadarControllerHeader(Header): |
|
|
271 | 271 | |
|
|
272 | 272 | expType = None |
|
|
273 | 273 | nTx = None |
|
|
274 | 274 | ipp = None |
|
|
275 | 275 | txA = None |
|
|
276 | 276 | txB = None |
|
|
277 | 277 | nWindows = None |
|
|
278 | 278 | numTaus = None |
|
|
279 | 279 | codeType = None |
|
|
280 | 280 | line6Function = None |
|
|
281 | 281 | line5Function = None |
|
|
282 | 282 | fClock = None |
|
|
283 | 283 | prePulseBefore = None |
|
|
284 | 284 | prePulseAfter = None |
|
|
285 | 285 | rangeIpp = None |
|
|
286 | 286 | rangeTxA = None |
|
|
287 | 287 | rangeTxB = None |
|
|
288 | 288 | structure = RADAR_STRUCTURE |
|
|
289 | 289 | __size = None |
|
|
290 | 290 | |
|
|
291 | 291 | def __init__(self, expType=2, nTx=1, |
|
|
292 | 292 | ipp=None, txA=0, txB=0, |
|
|
293 | 293 | nWindows=None, nHeights=None, firstHeight=None, deltaHeight=None, |
|
|
294 | 294 | numTaus=0, line6Function=0, line5Function=0, fClock=None, |
|
|
295 | 295 | prePulseBefore=0, prePulseAfter=0, |
|
|
296 | 296 | codeType=0, nCode=0, nBaud=0, code=None, |
|
|
297 | 297 | flip1=0, flip2=0): |
|
|
298 | 298 | |
|
|
299 | 299 | # self.size = 116 |
|
|
300 | 300 | self.expType = expType |
|
|
301 | 301 | self.nTx = nTx |
|
|
302 | 302 | self.ipp = ipp |
|
|
303 | 303 | self.txA = txA |
|
|
304 | 304 | self.txB = txB |
|
|
305 | 305 | self.rangeIpp = ipp |
|
|
306 | 306 | self.rangeTxA = txA |
|
|
307 | 307 | self.rangeTxB = txB |
|
|
308 | 308 | |
|
|
309 | 309 | self.nWindows = nWindows |
|
|
310 | 310 | self.numTaus = numTaus |
|
|
311 | 311 | self.codeType = codeType |
|
|
312 | 312 | self.line6Function = line6Function |
|
|
313 | 313 | self.line5Function = line5Function |
|
|
314 | 314 | self.fClock = fClock |
|
|
315 | 315 | self.prePulseBefore = prePulseBefore |
|
|
316 | 316 | self.prePulseAfter = prePulseAfter |
|
|
317 | 317 | |
|
|
318 | 318 | self.nHeights = nHeights |
|
|
319 | 319 | self.firstHeight = firstHeight |
|
|
320 | 320 | self.deltaHeight = deltaHeight |
|
|
321 | 321 | self.samplesWin = nHeights |
|
|
322 | 322 | |
|
|
323 | 323 | self.nCode = nCode |
|
|
324 | 324 | self.nBaud = nBaud |
|
|
325 | 325 | self.code = code |
|
|
326 | 326 | self.flip1 = flip1 |
|
|
327 | 327 | self.flip2 = flip2 |
|
|
328 | 328 | |
|
|
329 | 329 | self.code_size = int(numpy.ceil(self.nBaud/32.))*self.nCode*4 |
|
|
330 | 330 | # self.dynamic = numpy.array([],numpy.dtype('byte')) |
|
|
331 | 331 | |
|
|
332 | 332 | if self.fClock is None and self.deltaHeight is not None: |
|
|
333 | 333 | self.fClock = 0.15/(deltaHeight*1e-6) #0.15Km / (height * 1u) |
|
|
334 | 334 | |
|
|
335 | 335 | def read(self, fp): |
|
|
336 | 336 | self.length = 0 |
|
|
337 | 337 | try: |
|
|
338 | 338 | startFp = fp.tell() |
|
|
339 | 339 | except Exception, e: |
|
|
340 | 340 | startFp = None |
|
|
341 | 341 | pass |
|
|
342 | 342 | |
|
|
343 | 343 | try: |
|
|
344 | 344 | if hasattr(fp, 'read'): |
|
|
345 | 345 | header = numpy.fromfile(fp, RADAR_STRUCTURE,1) |
|
|
346 | 346 | else: |
|
|
347 | 347 | header = numpy.fromstring(fp, RADAR_STRUCTURE,1) |
|
|
348 | 348 | self.length += header.nbytes |
|
|
349 | 349 | except Exception, e: |
|
|
350 | 350 | print "RadarControllerHeader: " + str(e) |
|
|
351 | 351 | return 0 |
|
|
352 | 352 | |
|
|
353 | 353 | size = int(header['nSize'][0]) |
|
|
354 | 354 | self.expType = int(header['nExpType'][0]) |
|
|
355 | 355 | self.nTx = int(header['nNTx'][0]) |
|
|
356 | 356 | self.ipp = float(header['fIpp'][0]) |
|
|
357 | 357 | self.txA = float(header['fTxA'][0]) |
|
|
358 | 358 | self.txB = float(header['fTxB'][0]) |
|
|
359 | 359 | self.nWindows = int(header['nNumWindows'][0]) |
|
|
360 | 360 | self.numTaus = int(header['nNumTaus'][0]) |
|
|
361 | 361 | self.codeType = int(header['nCodeType'][0]) |
|
|
362 | 362 | self.line6Function = int(header['nLine6Function'][0]) |
|
|
363 | 363 | self.line5Function = int(header['nLine5Function'][0]) |
|
|
364 | 364 | self.fClock = float(header['fClock'][0]) |
|
|
365 | 365 | self.prePulseBefore = int(header['nPrePulseBefore'][0]) |
|
|
366 | 366 | self.prePulseAfter = int(header['nPrePulseAfter'][0]) |
|
|
367 | 367 | self.rangeIpp = header['sRangeIPP'][0] |
|
|
368 | 368 | self.rangeTxA = header['sRangeTxA'][0] |
|
|
369 | 369 | self.rangeTxB = header['sRangeTxB'][0] |
|
|
370 | 370 | |
|
|
371 | 371 | try: |
|
|
372 | 372 | if hasattr(fp, 'read'): |
|
|
373 | 373 | samplingWindow = numpy.fromfile(fp, SAMPLING_STRUCTURE, self.nWindows) |
|
|
374 | 374 | else: |
|
|
375 | 375 | samplingWindow = numpy.fromstring(fp[self.length:], SAMPLING_STRUCTURE, self.nWindows) |
|
|
376 | 376 | self.length += samplingWindow.nbytes |
|
|
377 | 377 | except Exception, e: |
|
|
378 | 378 | print "RadarControllerHeader: " + str(e) |
|
|
379 | 379 | return 0 |
|
|
380 | 380 | self.nHeights = int(numpy.sum(samplingWindow['nsa'])) |
|
|
381 | 381 | self.firstHeight = samplingWindow['h0'] |
|
|
382 | 382 | self.deltaHeight = samplingWindow['dh'] |
|
|
383 | 383 | self.samplesWin = samplingWindow['nsa'] |
|
|
384 | 384 | |
|
|
385 | 385 | |
|
|
386 | 386 | |
|
|
387 | 387 | try: |
|
|
388 | 388 | if hasattr(fp, 'read'): |
|
|
389 | 389 | self.Taus = numpy.fromfile(fp, '<f4', self.numTaus) |
|
|
390 | 390 | else: |
|
|
391 | 391 | self.Taus = numpy.fromstring(fp[self.length:], '<f4', self.numTaus) |
|
|
392 | 392 | self.length += self.Taus.nbytes |
|
|
393 | 393 | except Exception, e: |
|
|
394 | 394 | print "RadarControllerHeader: " + str(e) |
|
|
395 | 395 | return 0 |
|
|
396 | 396 | |
|
|
397 | 397 | |
|
|
398 | 398 | |
|
|
399 | 399 | self.code_size = 0 |
|
|
400 | 400 | if self.codeType != 0: |
|
|
401 | 401 | |
|
|
402 | 402 | try: |
|
|
403 | 403 | if hasattr(fp, 'read'): |
|
|
404 | 404 | self.nCode = numpy.fromfile(fp, '<u4', 1)[0] |
|
|
405 | 405 | self.length += self.nCode.nbytes |
|
|
406 | 406 | self.nBaud = numpy.fromfile(fp, '<u4', 1)[0] |
|
|
407 | 407 | self.length += self.nBaud.nbytes |
|
|
408 | 408 | else: |
|
|
409 | 409 | self.nCode = numpy.fromstring(fp[self.length:], '<u4', 1)[0] |
|
|
410 | 410 | self.length += self.nCode.nbytes |
|
|
411 | 411 | self.nBaud = numpy.fromstring(fp[self.length:], '<u4', 1)[0] |
|
|
412 | 412 | self.length += self.nBaud.nbytes |
|
|
413 | 413 | except Exception, e: |
|
|
414 | 414 | print "RadarControllerHeader: " + str(e) |
|
|
415 | 415 | return 0 |
|
|
416 | 416 | code = numpy.empty([self.nCode,self.nBaud],dtype='i1') |
|
|
417 | 417 | |
|
|
418 | 418 | for ic in range(self.nCode): |
|
|
419 | 419 | try: |
|
|
420 | 420 | if hasattr(fp, 'read'): |
|
|
421 | 421 | temp = numpy.fromfile(fp,'u4', int(numpy.ceil(self.nBaud/32.))) |
|
|
422 | 422 | else: |
|
|
423 | 423 | temp = numpy.fromstring(fp,'u4', int(numpy.ceil(self.nBaud/32.))) |
|
|
424 | 424 | self.length += temp.nbytes |
|
|
425 | 425 | except Exception, e: |
|
|
426 | 426 | print "RadarControllerHeader: " + str(e) |
|
|
427 | 427 | return 0 |
|
|
428 | 428 | |
|
|
429 | 429 | for ib in range(self.nBaud-1,-1,-1): |
|
|
430 | 430 | code[ic,ib] = temp[ib/32]%2 |
|
|
431 | 431 | temp[ib/32] = temp[ib/32]/2 |
|
|
432 | 432 | |
|
|
433 | 433 | self.code = 2.0*code - 1.0 |
|
|
434 | 434 | self.code_size = int(numpy.ceil(self.nBaud/32.))*self.nCode*4 |
|
|
435 | 435 | |
|
|
436 | 436 | # if self.line5Function == RCfunction.FLIP: |
|
|
437 | 437 | # self.flip1 = numpy.fromfile(fp,'<u4',1) |
|
|
438 | 438 | # |
|
|
439 | 439 | # if self.line6Function == RCfunction.FLIP: |
|
|
440 | 440 | # self.flip2 = numpy.fromfile(fp,'<u4',1) |
|
|
441 | 441 | if startFp is not None: |
|
|
442 | 442 | endFp = size + startFp |
|
|
443 | 443 | |
|
|
444 | 444 | if fp.tell() != endFp: |
|
|
445 | 445 | # fp.seek(endFp) |
|
|
446 | 446 | print "%s: Radar Controller Header size is not consistent: from data [%d] != from header field [%d]" %(fp.name, fp.tell()-startFp, size) |
|
|
447 | 447 | # return 0 |
|
|
448 | 448 | |
|
|
449 | 449 | if fp.tell() > endFp: |
|
|
450 | 450 | sys.stderr.write("Warning %s: Size value read from Radar Controller header is lower than it has to be\n" %fp.name) |
|
|
451 | 451 | # return 0 |
|
|
452 | 452 | |
|
|
453 | 453 | if fp.tell() < endFp: |
|
|
454 | 454 | sys.stderr.write("Warning %s: Size value read from Radar Controller header is greater than it has to be\n" %fp.name) |
|
|
455 | 455 | |
|
|
456 | 456 | |
|
|
457 | 457 | return 1 |
|
|
458 | 458 | |
|
|
459 | 459 | def write(self, fp): |
|
|
460 | 460 | |
|
|
461 | 461 | headerTuple = (self.size, |
|
|
462 | 462 | self.expType, |
|
|
463 | 463 | self.nTx, |
|
|
464 | 464 | self.ipp, |
|
|
465 | 465 | self.txA, |
|
|
466 | 466 | self.txB, |
|
|
467 | 467 | self.nWindows, |
|
|
468 | 468 | self.numTaus, |
|
|
469 | 469 | self.codeType, |
|
|
470 | 470 | self.line6Function, |
|
|
471 | 471 | self.line5Function, |
|
|
472 | 472 | self.fClock, |
|
|
473 | 473 | self.prePulseBefore, |
|
|
474 | 474 | self.prePulseAfter, |
|
|
475 | 475 | self.rangeIpp, |
|
|
476 | 476 | self.rangeTxA, |
|
|
477 | 477 | self.rangeTxB) |
|
|
478 | 478 | |
|
|
479 | 479 | header = numpy.array(headerTuple,RADAR_STRUCTURE) |
|
|
480 | 480 | header.tofile(fp) |
|
|
481 | 481 | |
|
|
482 | 482 | sampleWindowTuple = (self.firstHeight,self.deltaHeight,self.samplesWin) |
|
|
483 | 483 | samplingWindow = numpy.array(sampleWindowTuple,SAMPLING_STRUCTURE) |
|
|
484 | 484 | samplingWindow.tofile(fp) |
|
|
485 | 485 | |
|
|
486 | 486 | if self.numTaus > 0: |
|
|
487 | 487 | self.Taus.tofile(fp) |
|
|
488 | 488 | |
|
|
489 | 489 | if self.codeType !=0: |
|
|
490 | 490 | nCode = numpy.array(self.nCode, '<u4') |
|
|
491 | 491 | nCode.tofile(fp) |
|
|
492 | 492 | nBaud = numpy.array(self.nBaud, '<u4') |
|
|
493 | 493 | nBaud.tofile(fp) |
|
|
494 | 494 | code1 = (self.code + 1.0)/2. |
|
|
495 | 495 | |
|
|
496 | 496 | for ic in range(self.nCode): |
|
|
497 | tempx = numpy.zeros(numpy.ceil(self.nBaud/32.)) | |
|
|
497 | tempx = numpy.zeros(int(numpy.ceil(self.nBaud/32.))) | |
|
|
498 | 498 | start = 0 |
|
|
499 | 499 | end = 32 |
|
|
500 | 500 | for i in range(len(tempx)): |
|
|
501 | 501 | code_selected = code1[ic,start:end] |
|
|
502 | 502 | for j in range(len(code_selected)-1,-1,-1): |
|
|
503 | 503 | if code_selected[j] == 1: |
|
|
504 | 504 | tempx[i] = tempx[i] + 2**(len(code_selected)-1-j) |
|
|
505 | 505 | start = start + 32 |
|
|
506 | 506 | end = end + 32 |
|
|
507 | 507 | |
|
|
508 | 508 | tempx = tempx.astype('u4') |
|
|
509 | 509 | tempx.tofile(fp) |
|
|
510 | 510 | |
|
|
511 | 511 | # if self.line5Function == RCfunction.FLIP: |
|
|
512 | 512 | # self.flip1.tofile(fp) |
|
|
513 | 513 | # |
|
|
514 | 514 | # if self.line6Function == RCfunction.FLIP: |
|
|
515 | 515 | # self.flip2.tofile(fp) |
|
|
516 | 516 | |
|
|
517 | 517 | return 1 |
|
|
518 | 518 | |
|
|
519 | 519 | def get_ippSeconds(self): |
|
|
520 | 520 | ''' |
|
|
521 | 521 | ''' |
|
|
522 | 522 | ippSeconds = 2.0 * 1000 * self.ipp / SPEED_OF_LIGHT |
|
|
523 | 523 | |
|
|
524 | 524 | return ippSeconds |
|
|
525 | 525 | |
|
|
526 | 526 | def set_ippSeconds(self, ippSeconds): |
|
|
527 | 527 | ''' |
|
|
528 | 528 | ''' |
|
|
529 | 529 | |
|
|
530 | 530 | self.ipp = ippSeconds * SPEED_OF_LIGHT / (2.0*1000) |
|
|
531 | 531 | |
|
|
532 | 532 | return |
|
|
533 | 533 | |
|
|
534 | 534 | def get_size(self): |
|
|
535 | 535 | |
|
|
536 | 536 | self.__size = 116 + 12*self.nWindows + 4*self.numTaus |
|
|
537 | 537 | |
|
|
538 | 538 | if self.codeType != 0: |
|
|
539 | 539 | self.__size += 4 + 4 + 4*self.nCode*numpy.ceil(self.nBaud/32.) |
|
|
540 | 540 | |
|
|
541 | 541 | return self.__size |
|
|
542 | 542 | |
|
|
543 | 543 | def set_size(self, value): |
|
|
544 | 544 | |
|
|
545 | 545 | raise IOError, "size is a property and it cannot be set, just read" |
|
|
546 | 546 | |
|
|
547 | 547 | return |
|
|
548 | 548 | |
|
|
549 | 549 | ippSeconds = property(get_ippSeconds, set_ippSeconds) |
|
|
550 | 550 | size = property(get_size, set_size) |
|
|
551 | 551 | |
|
|
552 | 552 | class ProcessingHeader(Header): |
|
|
553 | 553 | |
|
|
554 | 554 | # size = None |
|
|
555 | 555 | dtype = None |
|
|
556 | 556 | blockSize = None |
|
|
557 | 557 | profilesPerBlock = None |
|
|
558 | 558 | dataBlocksPerFile = None |
|
|
559 | 559 | nWindows = None |
|
|
560 | 560 | processFlags = None |
|
|
561 | 561 | nCohInt = None |
|
|
562 | 562 | nIncohInt = None |
|
|
563 | 563 | totalSpectra = None |
|
|
564 | 564 | structure = PROCESSING_STRUCTURE |
|
|
565 | 565 | flag_dc = None |
|
|
566 | 566 | flag_cspc = None |
|
|
567 | 567 | |
|
|
568 | 568 | def __init__(self, dtype=0, blockSize=0, profilesPerBlock=0, dataBlocksPerFile=0, nWindows=0,processFlags=0, nCohInt=0, |
|
|
569 | 569 | nIncohInt=0, totalSpectra=0, nHeights=0, firstHeight=0, deltaHeight=0, samplesWin=0, spectraComb=0, nCode=0, |
|
|
570 | 570 | code=0, nBaud=None, shif_fft=False, flag_dc=False, flag_cspc=False, flag_decode=False, flag_deflip=False |
|
|
571 | 571 | ): |
|
|
572 | 572 | |
|
|
573 | 573 | # self.size = 0 |
|
|
574 | 574 | self.dtype = dtype |
|
|
575 | 575 | self.blockSize = blockSize |
|
|
576 | 576 | self.profilesPerBlock = 0 |
|
|
577 | 577 | self.dataBlocksPerFile = 0 |
|
|
578 | 578 | self.nWindows = 0 |
|
|
579 | 579 | self.processFlags = 0 |
|
|
580 | 580 | self.nCohInt = 0 |
|
|
581 | 581 | self.nIncohInt = 0 |
|
|
582 | 582 | self.totalSpectra = 0 |
|
|
583 | 583 | |
|
|
584 | 584 | self.nHeights = 0 |
|
|
585 | 585 | self.firstHeight = 0 |
|
|
586 | 586 | self.deltaHeight = 0 |
|
|
587 | 587 | self.samplesWin = 0 |
|
|
588 | 588 | self.spectraComb = 0 |
|
|
589 | 589 | self.nCode = None |
|
|
590 | 590 | self.code = None |
|
|
591 | 591 | self.nBaud = None |
|
|
592 | 592 | |
|
|
593 | 593 | self.shif_fft = False |
|
|
594 | 594 | self.flag_dc = False |
|
|
595 | 595 | self.flag_cspc = False |
|
|
596 | 596 | self.flag_decode = False |
|
|
597 | 597 | self.flag_deflip = False |
|
|
598 | 598 | self.length = 0 |
|
|
599 | 599 | |
|
|
600 | 600 | def read(self, fp): |
|
|
601 | 601 | self.length = 0 |
|
|
602 | 602 | try: |
|
|
603 | 603 | startFp = fp.tell() |
|
|
604 | 604 | except Exception, e: |
|
|
605 | 605 | startFp = None |
|
|
606 | 606 | pass |
|
|
607 | 607 | |
|
|
608 | 608 | try: |
|
|
609 | 609 | if hasattr(fp, 'read'): |
|
|
610 | 610 | header = numpy.fromfile(fp, PROCESSING_STRUCTURE, 1) |
|
|
611 | 611 | else: |
|
|
612 | 612 | header = numpy.fromstring(fp, PROCESSING_STRUCTURE, 1) |
|
|
613 | 613 | self.length += header.nbytes |
|
|
614 | 614 | except Exception, e: |
|
|
615 | 615 | print "ProcessingHeader: " + str(e) |
|
|
616 | 616 | return 0 |
|
|
617 | 617 | |
|
|
618 | 618 | size = int(header['nSize'][0]) |
|
|
619 | 619 | self.dtype = int(header['nDataType'][0]) |
|
|
620 | 620 | self.blockSize = int(header['nSizeOfDataBlock'][0]) |
|
|
621 | 621 | self.profilesPerBlock = int(header['nProfilesperBlock'][0]) |
|
|
622 | 622 | self.dataBlocksPerFile = int(header['nDataBlocksperFile'][0]) |
|
|
623 | 623 | self.nWindows = int(header['nNumWindows'][0]) |
|
|
624 | 624 | self.processFlags = header['nProcessFlags'] |
|
|
625 | 625 | self.nCohInt = int(header['nCoherentIntegrations'][0]) |
|
|
626 | 626 | self.nIncohInt = int(header['nIncoherentIntegrations'][0]) |
|
|
627 | 627 | self.totalSpectra = int(header['nTotalSpectra'][0]) |
|
|
628 | 628 | |
|
|
629 | 629 | try: |
|
|
630 | 630 | if hasattr(fp, 'read'): |
|
|
631 | 631 | samplingWindow = numpy.fromfile(fp, SAMPLING_STRUCTURE, self.nWindows) |
|
|
632 | 632 | else: |
|
|
633 | 633 | samplingWindow = numpy.fromstring(fp[self.length:], SAMPLING_STRUCTURE, self.nWindows) |
|
|
634 | 634 | self.length += samplingWindow.nbytes |
|
|
635 | 635 | except Exception, e: |
|
|
636 | 636 | print "ProcessingHeader: " + str(e) |
|
|
637 | 637 | return 0 |
|
|
638 | 638 | |
|
|
639 | 639 | self.nHeights = int(numpy.sum(samplingWindow['nsa'])) |
|
|
640 | 640 | self.firstHeight = float(samplingWindow['h0'][0]) |
|
|
641 | 641 | self.deltaHeight = float(samplingWindow['dh'][0]) |
|
|
642 | 642 | self.samplesWin = samplingWindow['nsa'][0] |
|
|
643 | 643 | |
|
|
644 | 644 | |
|
|
645 | 645 | try: |
|
|
646 | 646 | if hasattr(fp, 'read'): |
|
|
647 | 647 | self.spectraComb = numpy.fromfile(fp, 'u1', 2*self.totalSpectra) |
|
|
648 | 648 | else: |
|
|
649 | 649 | self.spectraComb = numpy.fromstring(fp[self.length:], 'u1', 2*self.totalSpectra) |
|
|
650 | 650 | self.length += self.spectraComb.nbytes |
|
|
651 | 651 | except Exception, e: |
|
|
652 | 652 | print "ProcessingHeader: " + str(e) |
|
|
653 | 653 | return 0 |
|
|
654 | 654 | |
|
|
655 | 655 | if ((self.processFlags & PROCFLAG.DEFINE_PROCESS_CODE) == PROCFLAG.DEFINE_PROCESS_CODE): |
|
|
656 | 656 | self.nCode = int(numpy.fromfile(fp,'<u4',1)) |
|
|
657 | 657 | self.nBaud = int(numpy.fromfile(fp,'<u4',1)) |
|
|
658 | 658 | self.code = numpy.fromfile(fp,'<f4',self.nCode*self.nBaud).reshape(self.nCode,self.nBaud) |
|
|
659 | 659 | |
|
|
660 | 660 | if ((self.processFlags & PROCFLAG.EXP_NAME_ESP) == PROCFLAG.EXP_NAME_ESP): |
|
|
661 | 661 | exp_name_len = int(numpy.fromfile(fp,'<u4',1)) |
|
|
662 | 662 | exp_name = numpy.fromfile(fp,'u1',exp_name_len+1) |
|
|
663 | 663 | |
|
|
664 | 664 | if ((self.processFlags & PROCFLAG.SHIFT_FFT_DATA) == PROCFLAG.SHIFT_FFT_DATA): |
|
|
665 | 665 | self.shif_fft = True |
|
|
666 | 666 | else: |
|
|
667 | 667 | self.shif_fft = False |
|
|
668 | 668 | |
|
|
669 | 669 | if ((self.processFlags & PROCFLAG.SAVE_CHANNELS_DC) == PROCFLAG.SAVE_CHANNELS_DC): |
|
|
670 | 670 | self.flag_dc = True |
|
|
671 | 671 | else: |
|
|
672 | 672 | self.flag_dc = False |
|
|
673 | 673 | |
|
|
674 | 674 | if ((self.processFlags & PROCFLAG.DECODE_DATA) == PROCFLAG.DECODE_DATA): |
|
|
675 | 675 | self.flag_decode = True |
|
|
676 | 676 | else: |
|
|
677 | 677 | self.flag_decode = False |
|
|
678 | 678 | |
|
|
679 | 679 | if ((self.processFlags & PROCFLAG.DEFLIP_DATA) == PROCFLAG.DEFLIP_DATA): |
|
|
680 | 680 | self.flag_deflip = True |
|
|
681 | 681 | else: |
|
|
682 | 682 | self.flag_deflip = False |
|
|
683 | 683 | |
|
|
684 | 684 | nChannels = 0 |
|
|
685 | 685 | nPairs = 0 |
|
|
686 | 686 | pairList = [] |
|
|
687 | 687 | |
|
|
688 | 688 | for i in range( 0, self.totalSpectra*2, 2 ): |
|
|
689 | 689 | if self.spectraComb[i] == self.spectraComb[i+1]: |
|
|
690 | 690 | nChannels = nChannels + 1 #par de canales iguales |
|
|
691 | 691 | else: |
|
|
692 | 692 | nPairs = nPairs + 1 #par de canales diferentes |
|
|
693 | 693 | pairList.append( (self.spectraComb[i], self.spectraComb[i+1]) ) |
|
|
694 | 694 | |
|
|
695 | 695 | self.flag_cspc = False |
|
|
696 | 696 | if nPairs > 0: |
|
|
697 | 697 | self.flag_cspc = True |
|
|
698 | 698 | |
|
|
699 | 699 | |
|
|
700 | 700 | |
|
|
701 | 701 | if startFp is not None: |
|
|
702 | 702 | endFp = size + startFp |
|
|
703 | 703 | if fp.tell() > endFp: |
|
|
704 | 704 | sys.stderr.write("Warning: Processing header size is lower than it has to be") |
|
|
705 | 705 | return 0 |
|
|
706 | 706 | |
|
|
707 | 707 | if fp.tell() < endFp: |
|
|
708 | 708 | sys.stderr.write("Warning: Processing header size is greater than it is considered") |
|
|
709 | 709 | |
|
|
710 | 710 | return 1 |
|
|
711 | 711 | |
|
|
712 | 712 | def write(self, fp): |
|
|
713 | 713 | #Clear DEFINE_PROCESS_CODE |
|
|
714 | 714 | self.processFlags = self.processFlags & (~PROCFLAG.DEFINE_PROCESS_CODE) |
|
|
715 | 715 | |
|
|
716 | 716 | headerTuple = (self.size, |
|
|
717 | 717 | self.dtype, |
|
|
718 | 718 | self.blockSize, |
|
|
719 | 719 | self.profilesPerBlock, |
|
|
720 | 720 | self.dataBlocksPerFile, |
|
|
721 | 721 | self.nWindows, |
|
|
722 | 722 | self.processFlags, |
|
|
723 | 723 | self.nCohInt, |
|
|
724 | 724 | self.nIncohInt, |
|
|
725 | 725 | self.totalSpectra) |
|
|
726 | 726 | |
|
|
727 | 727 | header = numpy.array(headerTuple,PROCESSING_STRUCTURE) |
|
|
728 | 728 | header.tofile(fp) |
|
|
729 | 729 | |
|
|
730 | 730 | if self.nWindows != 0: |
|
|
731 | 731 | sampleWindowTuple = (self.firstHeight,self.deltaHeight,self.samplesWin) |
|
|
732 | 732 | samplingWindow = numpy.array(sampleWindowTuple,SAMPLING_STRUCTURE) |
|
|
733 | 733 | samplingWindow.tofile(fp) |
|
|
734 | 734 | |
|
|
735 | 735 | if self.totalSpectra != 0: |
|
|
736 | 736 | # spectraComb = numpy.array([],numpy.dtype('u1')) |
|
|
737 | 737 | spectraComb = self.spectraComb |
|
|
738 | 738 | spectraComb.tofile(fp) |
|
|
739 | 739 | |
|
|
740 | 740 | # if self.processFlags & PROCFLAG.DEFINE_PROCESS_CODE == PROCFLAG.DEFINE_PROCESS_CODE: |
|
|
741 | 741 | # nCode = numpy.array([self.nCode], numpy.dtype('u4')) #Probar con un dato que almacene codigo, hasta el momento no se hizo la prueba |
|
|
742 | 742 | # nCode.tofile(fp) |
|
|
743 | 743 | # |
|
|
744 | 744 | # nBaud = numpy.array([self.nBaud], numpy.dtype('u4')) |
|
|
745 | 745 | # nBaud.tofile(fp) |
|
|
746 | 746 | # |
|
|
747 | 747 | # code = self.code.reshape(self.nCode*self.nBaud) |
|
|
748 | 748 | # code = code.astype(numpy.dtype('<f4')) |
|
|
749 | 749 | # code.tofile(fp) |
|
|
750 | 750 | |
|
|
751 | 751 | return 1 |
|
|
752 | 752 | |
|
|
753 | 753 | def get_size(self): |
|
|
754 | 754 | |
|
|
755 | 755 | self.__size = 40 + 12*self.nWindows + 2*self.totalSpectra |
|
|
756 | 756 | |
|
|
757 | 757 | # if self.processFlags & PROCFLAG.DEFINE_PROCESS_CODE == PROCFLAG.DEFINE_PROCESS_CODE: |
|
|
758 | 758 | # self.__size += 4 + 4 + 4*self.nCode*numpy.ceil(self.nBaud/32.) |
|
|
759 | 759 | # self.__size += 4 + 4 + 4 * self.nCode * self.nBaud |
|
|
760 | 760 | |
|
|
761 | 761 | return self.__size |
|
|
762 | 762 | |
|
|
763 | 763 | def set_size(self, value): |
|
|
764 | 764 | |
|
|
765 | 765 | raise IOError, "size is a property and it cannot be set, just read" |
|
|
766 | 766 | |
|
|
767 | 767 | return |
|
|
768 | 768 | |
|
|
769 | 769 | size = property(get_size, set_size) |
|
|
770 | 770 | |
|
|
771 | 771 | class RCfunction: |
|
|
772 | 772 | NONE=0 |
|
|
773 | 773 | FLIP=1 |
|
|
774 | 774 | CODE=2 |
|
|
775 | 775 | SAMPLING=3 |
|
|
776 | 776 | LIN6DIV256=4 |
|
|
777 | 777 | SYNCHRO=5 |
|
|
778 | 778 | |
|
|
779 | 779 | class nCodeType: |
|
|
780 | 780 | NONE=0 |
|
|
781 | 781 | USERDEFINE=1 |
|
|
782 | 782 | BARKER2=2 |
|
|
783 | 783 | BARKER3=3 |
|
|
784 | 784 | BARKER4=4 |
|
|
785 | 785 | BARKER5=5 |
|
|
786 | 786 | BARKER7=6 |
|
|
787 | 787 | BARKER11=7 |
|
|
788 | 788 | BARKER13=8 |
|
|
789 | 789 | AC128=9 |
|
|
790 | 790 | COMPLEMENTARYCODE2=10 |
|
|
791 | 791 | COMPLEMENTARYCODE4=11 |
|
|
792 | 792 | COMPLEMENTARYCODE8=12 |
|
|
793 | 793 | COMPLEMENTARYCODE16=13 |
|
|
794 | 794 | COMPLEMENTARYCODE32=14 |
|
|
795 | 795 | COMPLEMENTARYCODE64=15 |
|
|
796 | 796 | COMPLEMENTARYCODE128=16 |
|
|
797 | 797 | CODE_BINARY28=17 |
|
|
798 | 798 | |
|
|
799 | 799 | class PROCFLAG: |
|
|
800 | 800 | |
|
|
801 | 801 | COHERENT_INTEGRATION = numpy.uint32(0x00000001) |
|
|
802 | 802 | DECODE_DATA = numpy.uint32(0x00000002) |
|
|
803 | 803 | SPECTRA_CALC = numpy.uint32(0x00000004) |
|
|
804 | 804 | INCOHERENT_INTEGRATION = numpy.uint32(0x00000008) |
|
|
805 | 805 | POST_COHERENT_INTEGRATION = numpy.uint32(0x00000010) |
|
|
806 | 806 | SHIFT_FFT_DATA = numpy.uint32(0x00000020) |
|
|
807 | 807 | |
|
|
808 | 808 | DATATYPE_CHAR = numpy.uint32(0x00000040) |
|
|
809 | 809 | DATATYPE_SHORT = numpy.uint32(0x00000080) |
|
|
810 | 810 | DATATYPE_LONG = numpy.uint32(0x00000100) |
|
|
811 | 811 | DATATYPE_INT64 = numpy.uint32(0x00000200) |
|
|
812 | 812 | DATATYPE_FLOAT = numpy.uint32(0x00000400) |
|
|
813 | 813 | DATATYPE_DOUBLE = numpy.uint32(0x00000800) |
|
|
814 | 814 | |
|
|
815 | 815 | DATAARRANGE_CONTIGUOUS_CH = numpy.uint32(0x00001000) |
|
|
816 | 816 | DATAARRANGE_CONTIGUOUS_H = numpy.uint32(0x00002000) |
|
|
817 | 817 | DATAARRANGE_CONTIGUOUS_P = numpy.uint32(0x00004000) |
|
|
818 | 818 | |
|
|
819 | 819 | SAVE_CHANNELS_DC = numpy.uint32(0x00008000) |
|
|
820 | 820 | DEFLIP_DATA = numpy.uint32(0x00010000) |
|
|
821 | 821 | DEFINE_PROCESS_CODE = numpy.uint32(0x00020000) |
|
|
822 | 822 | |
|
|
823 | 823 | ACQ_SYS_NATALIA = numpy.uint32(0x00040000) |
|
|
824 | 824 | ACQ_SYS_ECHOTEK = numpy.uint32(0x00080000) |
|
|
825 | 825 | ACQ_SYS_ADRXD = numpy.uint32(0x000C0000) |
|
|
826 | 826 | ACQ_SYS_JULIA = numpy.uint32(0x00100000) |
|
|
827 | 827 | ACQ_SYS_XXXXXX = numpy.uint32(0x00140000) |
|
|
828 | 828 | |
|
|
829 | 829 | EXP_NAME_ESP = numpy.uint32(0x00200000) |
|
|
830 | 830 | CHANNEL_NAMES_ESP = numpy.uint32(0x00400000) |
|
|
831 | 831 | |
|
|
832 | 832 | OPERATION_MASK = numpy.uint32(0x0000003F) |
|
|
833 | 833 | DATATYPE_MASK = numpy.uint32(0x00000FC0) |
|
|
834 | 834 | DATAARRANGE_MASK = numpy.uint32(0x00007000) |
|
|
835 | 835 | ACQ_SYS_MASK = numpy.uint32(0x001C0000) |
|
|
836 | 836 | |
|
|
837 | 837 | dtype0 = numpy.dtype([('real','<i1'),('imag','<i1')]) |
|
|
838 | 838 | dtype1 = numpy.dtype([('real','<i2'),('imag','<i2')]) |
|
|
839 | 839 | dtype2 = numpy.dtype([('real','<i4'),('imag','<i4')]) |
|
|
840 | 840 | dtype3 = numpy.dtype([('real','<i8'),('imag','<i8')]) |
|
|
841 | 841 | dtype4 = numpy.dtype([('real','<f4'),('imag','<f4')]) |
|
|
842 | 842 | dtype5 = numpy.dtype([('real','<f8'),('imag','<f8')]) |
|
|
843 | 843 | |
|
|
844 | 844 | NUMPY_DTYPE_LIST = [dtype0, dtype1, dtype2, dtype3, dtype4, dtype5] |
|
|
845 | 845 | |
|
|
846 | 846 | PROCFLAG_DTYPE_LIST = [PROCFLAG.DATATYPE_CHAR, |
|
|
847 | 847 | PROCFLAG.DATATYPE_SHORT, |
|
|
848 | 848 | PROCFLAG.DATATYPE_LONG, |
|
|
849 | 849 | PROCFLAG.DATATYPE_INT64, |
|
|
850 | 850 | PROCFLAG.DATATYPE_FLOAT, |
|
|
851 | 851 | PROCFLAG.DATATYPE_DOUBLE] |
|
|
852 | 852 | |
|
|
853 | 853 | DTYPE_WIDTH = [1, 2, 4, 8, 4, 8] |
|
|
854 | 854 | |
|
|
855 | 855 | def get_dtype_index(numpy_dtype): |
|
|
856 | 856 | |
|
|
857 | 857 | index = None |
|
|
858 | 858 | |
|
|
859 | 859 | for i in range(len(NUMPY_DTYPE_LIST)): |
|
|
860 | 860 | if numpy_dtype == NUMPY_DTYPE_LIST[i]: |
|
|
861 | 861 | index = i |
|
|
862 | 862 | break |
|
|
863 | 863 | |
|
|
864 | 864 | return index |
|
|
865 | 865 | |
|
|
866 | 866 | def get_numpy_dtype(index): |
|
|
867 | 867 | |
|
|
868 | 868 | return NUMPY_DTYPE_LIST[index] |
|
|
869 | 869 | |
|
|
870 | 870 | def get_procflag_dtype(index): |
|
|
871 | 871 | |
|
|
872 | 872 | return PROCFLAG_DTYPE_LIST[index] |
|
|
873 | 873 | |
|
|
874 | 874 | def get_dtype_width(index): |
|
|
875 | 875 | |
|
|
876 | 876 | return DTYPE_WIDTH[index] No newline at end of file |
| @@ -1,1833 +1,1824 | |||
|
|
1 | 1 | ''' |
|
|
2 | 2 | Created on Jul 2, 2014 |
|
|
3 | 3 | |
|
|
4 | 4 | @author: roj-idl71 |
|
|
5 | 5 | ''' |
|
|
6 | 6 | import os |
|
|
7 | 7 | import sys |
|
|
8 | 8 | import glob |
|
|
9 | 9 | import time |
|
|
10 | 10 | import numpy |
|
|
11 | 11 | import fnmatch |
|
|
12 | 12 | import inspect |
|
|
13 | 13 | import time |
|
|
14 | 14 | import datetime |
|
|
15 | 15 | import traceback |
|
|
16 | 16 | import zmq |
|
|
17 | 17 | |
|
|
18 | 18 | try: |
|
|
19 | 19 | from gevent import sleep |
|
|
20 | 20 | except: |
|
|
21 | 21 | from time import sleep |
|
|
22 | 22 | |
|
|
23 | 23 | from schainpy.model.data.jroheaderIO import PROCFLAG, BasicHeader, SystemHeader, RadarControllerHeader, ProcessingHeader |
|
|
24 | 24 | from schainpy.model.data.jroheaderIO import get_dtype_index, get_numpy_dtype, get_procflag_dtype, get_dtype_width |
|
|
25 | from schainpy.utils import log | |
|
|
25 | 26 | |
|
|
26 | 27 | LOCALTIME = True |
|
|
27 | 28 | |
|
|
28 | 29 | |
|
|
29 | 30 | def isNumber(cad): |
|
|
30 | 31 | """ |
|
|
31 | 32 | Chequea si el conjunto de caracteres que componen un string puede ser convertidos a un numero. |
|
|
32 | 33 | |
|
|
33 | 34 | Excepciones: |
|
|
34 | 35 | Si un determinado string no puede ser convertido a numero |
|
|
35 | 36 | Input: |
|
|
36 | 37 | str, string al cual se le analiza para determinar si convertible a un numero o no |
|
|
37 | 38 | |
|
|
38 | 39 | Return: |
|
|
39 | 40 | True : si el string es uno numerico |
|
|
40 | 41 | False : no es un string numerico |
|
|
41 | 42 | """ |
|
|
42 | 43 | try: |
|
|
43 | 44 | float(cad) |
|
|
44 | 45 | return True |
|
|
45 | 46 | except: |
|
|
46 | 47 | return False |
|
|
47 | 48 | |
|
|
48 | 49 | |
|
|
49 | 50 | def isFileInEpoch(filename, startUTSeconds, endUTSeconds): |
|
|
50 | 51 | """ |
|
|
51 | 52 | Esta funcion determina si un archivo de datos se encuentra o no dentro del rango de fecha especificado. |
|
|
52 | 53 | |
|
|
53 | 54 | Inputs: |
|
|
54 | 55 | filename : nombre completo del archivo de datos en formato Jicamarca (.r) |
|
|
55 | 56 | |
|
|
56 | 57 | startUTSeconds : fecha inicial del rango seleccionado. La fecha esta dada en |
|
|
57 | 58 | segundos contados desde 01/01/1970. |
|
|
58 | 59 | endUTSeconds : fecha final del rango seleccionado. La fecha esta dada en |
|
|
59 | 60 | segundos contados desde 01/01/1970. |
|
|
60 | 61 | |
|
|
61 | 62 | Return: |
|
|
62 | 63 | Boolean : Retorna True si el archivo de datos contiene datos en el rango de |
|
|
63 | 64 | fecha especificado, de lo contrario retorna False. |
|
|
64 | 65 | |
|
|
65 | 66 | Excepciones: |
|
|
66 | 67 | Si el archivo no existe o no puede ser abierto |
|
|
67 | 68 | Si la cabecera no puede ser leida. |
|
|
68 | 69 | |
|
|
69 | 70 | """ |
|
|
70 | 71 | basicHeaderObj = BasicHeader(LOCALTIME) |
|
|
71 | 72 | |
|
|
72 | 73 | try: |
|
|
73 | 74 | fp = open(filename, 'rb') |
|
|
74 | 75 | except IOError: |
|
|
75 | 76 | print "The file %s can't be opened" % (filename) |
|
|
76 | 77 | return 0 |
|
|
77 | 78 | |
|
|
78 | 79 | sts = basicHeaderObj.read(fp) |
|
|
79 | 80 | fp.close() |
|
|
80 | 81 | |
|
|
81 | 82 | if not(sts): |
|
|
82 | 83 | print "Skipping the file %s because it has not a valid header" % (filename) |
|
|
83 | 84 | return 0 |
|
|
84 | 85 | |
|
|
85 | 86 | if not ((startUTSeconds <= basicHeaderObj.utc) and (endUTSeconds > basicHeaderObj.utc)): |
|
|
86 | 87 | return 0 |
|
|
87 | 88 | |
|
|
88 | 89 | return 1 |
|
|
89 | 90 | |
|
|
90 | 91 | |
|
|
91 | 92 | def isTimeInRange(thisTime, startTime, endTime): |
|
|
92 | 93 | if endTime >= startTime: |
|
|
93 | 94 | if (thisTime < startTime) or (thisTime > endTime): |
|
|
94 | 95 | return 0 |
|
|
95 | 96 | return 1 |
|
|
96 | 97 | else: |
|
|
97 | 98 | if (thisTime < startTime) and (thisTime > endTime): |
|
|
98 | 99 | return 0 |
|
|
99 | 100 | return 1 |
|
|
100 | 101 | |
|
|
101 | 102 | |
|
|
102 | 103 | def isFileInTimeRange(filename, startDate, endDate, startTime, endTime): |
|
|
103 | 104 | """ |
|
|
104 | 105 | Retorna 1 si el archivo de datos se encuentra dentro del rango de horas especificado. |
|
|
105 | 106 | |
|
|
106 | 107 | Inputs: |
|
|
107 | 108 | filename : nombre completo del archivo de datos en formato Jicamarca (.r) |
|
|
108 | 109 | |
|
|
109 | 110 | startDate : fecha inicial del rango seleccionado en formato datetime.date |
|
|
110 | 111 | |
|
|
111 | 112 | endDate : fecha final del rango seleccionado en formato datetime.date |
|
|
112 | 113 | |
|
|
113 | 114 | startTime : tiempo inicial del rango seleccionado en formato datetime.time |
|
|
114 | 115 | |
|
|
115 | 116 | endTime : tiempo final del rango seleccionado en formato datetime.time |
|
|
116 | 117 | |
|
|
117 | 118 | Return: |
|
|
118 | 119 | Boolean : Retorna True si el archivo de datos contiene datos en el rango de |
|
|
119 | 120 | fecha especificado, de lo contrario retorna False. |
|
|
120 | 121 | |
|
|
121 | 122 | Excepciones: |
|
|
122 | 123 | Si el archivo no existe o no puede ser abierto |
|
|
123 | 124 | Si la cabecera no puede ser leida. |
|
|
124 | 125 | |
|
|
125 | 126 | """ |
|
|
126 | 127 | |
|
|
127 | 128 | try: |
|
|
128 | 129 | fp = open(filename, 'rb') |
|
|
129 | 130 | except IOError: |
|
|
130 | 131 | print "The file %s can't be opened" % (filename) |
|
|
131 | 132 | return None |
|
|
132 | 133 | |
|
|
133 | 134 | firstBasicHeaderObj = BasicHeader(LOCALTIME) |
|
|
134 | 135 | systemHeaderObj = SystemHeader() |
|
|
135 | 136 | radarControllerHeaderObj = RadarControllerHeader() |
|
|
136 | 137 | processingHeaderObj = ProcessingHeader() |
|
|
137 | 138 | |
|
|
138 | 139 | lastBasicHeaderObj = BasicHeader(LOCALTIME) |
|
|
139 | 140 | |
|
|
140 | 141 | sts = firstBasicHeaderObj.read(fp) |
|
|
141 | 142 | |
|
|
142 | 143 | if not(sts): |
|
|
143 | 144 | print "[Reading] Skipping the file %s because it has not a valid header" % (filename) |
|
|
144 | 145 | return None |
|
|
145 | 146 | |
|
|
146 | 147 | if not systemHeaderObj.read(fp): |
|
|
147 | 148 | return None |
|
|
148 | 149 | |
|
|
149 | 150 | if not radarControllerHeaderObj.read(fp): |
|
|
150 | 151 | return None |
|
|
151 | 152 | |
|
|
152 | 153 | if not processingHeaderObj.read(fp): |
|
|
153 | 154 | return None |
|
|
154 | 155 | |
|
|
155 | 156 | filesize = os.path.getsize(filename) |
|
|
156 | 157 | |
|
|
157 | 158 | offset = processingHeaderObj.blockSize + 24 # header size |
|
|
158 | 159 | |
|
|
159 | 160 | if filesize <= offset: |
|
|
160 | 161 | print "[Reading] %s: This file has not enough data" % filename |
|
|
161 | 162 | return None |
|
|
162 | 163 | |
|
|
163 | 164 | fp.seek(-offset, 2) |
|
|
164 | 165 | |
|
|
165 | 166 | sts = lastBasicHeaderObj.read(fp) |
|
|
166 | 167 | |
|
|
167 | 168 | fp.close() |
|
|
168 | 169 | |
|
|
169 | 170 | thisDatetime = lastBasicHeaderObj.datatime |
|
|
170 | 171 | thisTime_last_block = thisDatetime.time() |
|
|
171 | 172 | |
|
|
172 | 173 | thisDatetime = firstBasicHeaderObj.datatime |
|
|
173 | 174 | thisDate = thisDatetime.date() |
|
|
174 | 175 | thisTime_first_block = thisDatetime.time() |
|
|
175 | 176 | |
|
|
176 | 177 | # General case |
|
|
177 | 178 | # o>>>>>>>>>>>>>><<<<<<<<<<<<<<o |
|
|
178 | 179 | #-----------o----------------------------o----------- |
|
|
179 | 180 | # startTime endTime |
|
|
180 | 181 | |
|
|
181 | 182 | if endTime >= startTime: |
|
|
182 | 183 | if (thisTime_last_block < startTime) or (thisTime_first_block > endTime): |
|
|
183 | 184 | return None |
|
|
184 | 185 | |
|
|
185 | 186 | return thisDatetime |
|
|
186 | 187 | |
|
|
187 | 188 | # If endTime < startTime then endTime belongs to the next day |
|
|
188 | 189 | |
|
|
189 | 190 | #<<<<<<<<<<<o o>>>>>>>>>>> |
|
|
190 | 191 | #-----------o----------------------------o----------- |
|
|
191 | 192 | # endTime startTime |
|
|
192 | 193 | |
|
|
193 | 194 | if (thisDate == startDate) and (thisTime_last_block < startTime): |
|
|
194 | 195 | return None |
|
|
195 | 196 | |
|
|
196 | 197 | if (thisDate == endDate) and (thisTime_first_block > endTime): |
|
|
197 | 198 | return None |
|
|
198 | 199 | |
|
|
199 | 200 | if (thisTime_last_block < startTime) and (thisTime_first_block > endTime): |
|
|
200 | 201 | return None |
|
|
201 | 202 | |
|
|
202 | 203 | return thisDatetime |
|
|
203 | 204 | |
|
|
204 | 205 | |
|
|
205 | 206 | def isFolderInDateRange(folder, startDate=None, endDate=None): |
|
|
206 | 207 | """ |
|
|
207 | 208 | Retorna 1 si el archivo de datos se encuentra dentro del rango de horas especificado. |
|
|
208 | 209 | |
|
|
209 | 210 | Inputs: |
|
|
210 | 211 | folder : nombre completo del directorio. |
|
|
211 | 212 | Su formato deberia ser "/path_root/?YYYYDDD" |
|
|
212 | 213 | |
|
|
213 | 214 | siendo: |
|
|
214 | 215 | YYYY : Anio (ejemplo 2015) |
|
|
215 | 216 | DDD : Dia del anio (ejemplo 305) |
|
|
216 | 217 | |
|
|
217 | 218 | startDate : fecha inicial del rango seleccionado en formato datetime.date |
|
|
218 | 219 | |
|
|
219 | 220 | endDate : fecha final del rango seleccionado en formato datetime.date |
|
|
220 | 221 | |
|
|
221 | 222 | Return: |
|
|
222 | 223 | Boolean : Retorna True si el archivo de datos contiene datos en el rango de |
|
|
223 | 224 | fecha especificado, de lo contrario retorna False. |
|
|
224 | 225 | Excepciones: |
|
|
225 | 226 | Si el directorio no tiene el formato adecuado |
|
|
226 | 227 | """ |
|
|
227 | 228 | |
|
|
228 | 229 | basename = os.path.basename(folder) |
|
|
229 | 230 | |
|
|
230 | 231 | if not isRadarFolder(basename): |
|
|
231 | 232 | print "The folder %s has not the rigth format" % folder |
|
|
232 | 233 | return 0 |
|
|
233 | 234 | |
|
|
234 | 235 | if startDate and endDate: |
|
|
235 | 236 | thisDate = getDateFromRadarFolder(basename) |
|
|
236 | 237 | |
|
|
237 | 238 | if thisDate < startDate: |
|
|
238 | 239 | return 0 |
|
|
239 | 240 | |
|
|
240 | 241 | if thisDate > endDate: |
|
|
241 | 242 | return 0 |
|
|
242 | 243 | |
|
|
243 | 244 | return 1 |
|
|
244 | 245 | |
|
|
245 | 246 | |
|
|
246 | 247 | def isFileInDateRange(filename, startDate=None, endDate=None): |
|
|
247 | 248 | """ |
|
|
248 | 249 | Retorna 1 si el archivo de datos se encuentra dentro del rango de horas especificado. |
|
|
249 | 250 | |
|
|
250 | 251 | Inputs: |
|
|
251 | 252 | filename : nombre completo del archivo de datos en formato Jicamarca (.r) |
|
|
252 | 253 | |
|
|
253 | 254 | Su formato deberia ser "?YYYYDDDsss" |
|
|
254 | 255 | |
|
|
255 | 256 | siendo: |
|
|
256 | 257 | YYYY : Anio (ejemplo 2015) |
|
|
257 | 258 | DDD : Dia del anio (ejemplo 305) |
|
|
258 | 259 | sss : set |
|
|
259 | 260 | |
|
|
260 | 261 | startDate : fecha inicial del rango seleccionado en formato datetime.date |
|
|
261 | 262 | |
|
|
262 | 263 | endDate : fecha final del rango seleccionado en formato datetime.date |
|
|
263 | 264 | |
|
|
264 | 265 | Return: |
|
|
265 | 266 | Boolean : Retorna True si el archivo de datos contiene datos en el rango de |
|
|
266 | 267 | fecha especificado, de lo contrario retorna False. |
|
|
267 | 268 | Excepciones: |
|
|
268 | 269 | Si el archivo no tiene el formato adecuado |
|
|
269 | 270 | """ |
|
|
270 | 271 | |
|
|
271 | 272 | basename = os.path.basename(filename) |
|
|
272 | 273 | |
|
|
273 | 274 | if not isRadarFile(basename): |
|
|
274 | 275 | print "The filename %s has not the rigth format" % filename |
|
|
275 | 276 | return 0 |
|
|
276 | 277 | |
|
|
277 | 278 | if startDate and endDate: |
|
|
278 | 279 | thisDate = getDateFromRadarFile(basename) |
|
|
279 | 280 | |
|
|
280 | 281 | if thisDate < startDate: |
|
|
281 | 282 | return 0 |
|
|
282 | 283 | |
|
|
283 | 284 | if thisDate > endDate: |
|
|
284 | 285 | return 0 |
|
|
285 | 286 | |
|
|
286 | 287 | return 1 |
|
|
287 | 288 | |
|
|
288 | 289 | |
|
|
289 | 290 | def getFileFromSet(path, ext, set): |
|
|
290 | 291 | validFilelist = [] |
|
|
291 | 292 | fileList = os.listdir(path) |
|
|
292 | 293 | |
|
|
293 | 294 | # 0 1234 567 89A BCDE |
|
|
294 | 295 | # H YYYY DDD SSS .ext |
|
|
295 | 296 | |
|
|
296 | 297 | for thisFile in fileList: |
|
|
297 | 298 | try: |
|
|
298 | 299 | year = int(thisFile[1:5]) |
|
|
299 | 300 | doy = int(thisFile[5:8]) |
|
|
300 | 301 | except: |
|
|
301 | 302 | continue |
|
|
302 | 303 | |
|
|
303 | 304 | if (os.path.splitext(thisFile)[-1].lower() != ext.lower()): |
|
|
304 | 305 | continue |
|
|
305 | 306 | |
|
|
306 | 307 | validFilelist.append(thisFile) |
|
|
307 | 308 | |
|
|
308 | 309 | myfile = fnmatch.filter( |
|
|
309 | 310 | validFilelist, '*%4.4d%3.3d%3.3d*' % (year, doy, set)) |
|
|
310 | 311 | |
|
|
311 | 312 | if len(myfile) != 0: |
|
|
312 | 313 | return myfile[0] |
|
|
313 | 314 | else: |
|
|
314 | 315 | filename = '*%4.4d%3.3d%3.3d%s' % (year, doy, set, ext.lower()) |
|
|
315 | 316 | print 'the filename %s does not exist' % filename |
|
|
316 | 317 | print '...going to the last file: ' |
|
|
317 | 318 | |
|
|
318 | 319 | if validFilelist: |
|
|
319 | 320 | validFilelist = sorted(validFilelist, key=str.lower) |
|
|
320 | 321 | return validFilelist[-1] |
|
|
321 | 322 | |
|
|
322 | 323 | return None |
|
|
323 | 324 | |
|
|
324 | 325 | |
|
|
325 | 326 | def getlastFileFromPath(path, ext): |
|
|
326 | 327 | """ |
|
|
327 | 328 | Depura el fileList dejando solo los que cumplan el formato de "PYYYYDDDSSS.ext" |
|
|
328 | 329 | al final de la depuracion devuelve el ultimo file de la lista que quedo. |
|
|
329 | 330 | |
|
|
330 | 331 | Input: |
|
|
331 | 332 | fileList : lista conteniendo todos los files (sin path) que componen una determinada carpeta |
|
|
332 | 333 | ext : extension de los files contenidos en una carpeta |
|
|
333 | 334 | |
|
|
334 | 335 | Return: |
|
|
335 | 336 | El ultimo file de una determinada carpeta, no se considera el path. |
|
|
336 | 337 | """ |
|
|
337 | 338 | validFilelist = [] |
|
|
338 | 339 | fileList = os.listdir(path) |
|
|
339 | 340 | |
|
|
340 | 341 | # 0 1234 567 89A BCDE |
|
|
341 | 342 | # H YYYY DDD SSS .ext |
|
|
342 | 343 | |
|
|
343 | 344 | for thisFile in fileList: |
|
|
344 | 345 | |
|
|
345 | 346 | year = thisFile[1:5] |
|
|
346 | 347 | if not isNumber(year): |
|
|
347 | 348 | continue |
|
|
348 | 349 | |
|
|
349 | 350 | doy = thisFile[5:8] |
|
|
350 | 351 | if not isNumber(doy): |
|
|
351 | 352 | continue |
|
|
352 | 353 | |
|
|
353 | 354 | year = int(year) |
|
|
354 | 355 | doy = int(doy) |
|
|
355 | 356 | |
|
|
356 | 357 | if (os.path.splitext(thisFile)[-1].lower() != ext.lower()): |
|
|
357 | 358 | continue |
|
|
358 | 359 | |
|
|
359 | 360 | validFilelist.append(thisFile) |
|
|
360 | 361 | |
|
|
361 | 362 | if validFilelist: |
|
|
362 | 363 | validFilelist = sorted(validFilelist, key=str.lower) |
|
|
363 | 364 | return validFilelist[-1] |
|
|
364 | 365 | |
|
|
365 | 366 | return None |
|
|
366 | 367 | |
|
|
367 | 368 | |
|
|
368 | 369 | def checkForRealPath(path, foldercounter, year, doy, set, ext): |
|
|
369 | 370 | """ |
|
|
370 | 371 | Por ser Linux Case Sensitive entonces checkForRealPath encuentra el nombre correcto de un path, |
|
|
371 | 372 | Prueba por varias combinaciones de nombres entre mayusculas y minusculas para determinar |
|
|
372 | 373 | el path exacto de un determinado file. |
|
|
373 | 374 | |
|
|
374 | 375 | Example : |
|
|
375 | 376 | nombre correcto del file es .../.../D2009307/P2009307367.ext |
|
|
376 | 377 | |
|
|
377 | 378 | Entonces la funcion prueba con las siguientes combinaciones |
|
|
378 | 379 | .../.../y2009307367.ext |
|
|
379 | 380 | .../.../Y2009307367.ext |
|
|
380 | 381 | .../.../x2009307/y2009307367.ext |
|
|
381 | 382 | .../.../x2009307/Y2009307367.ext |
|
|
382 | 383 | .../.../X2009307/y2009307367.ext |
|
|
383 | 384 | .../.../X2009307/Y2009307367.ext |
|
|
384 | 385 | siendo para este caso, la ultima combinacion de letras, identica al file buscado |
|
|
385 | 386 | |
|
|
386 | 387 | Return: |
|
|
387 | 388 | Si encuentra la cobinacion adecuada devuelve el path completo y el nombre del file |
|
|
388 | 389 | caso contrario devuelve None como path y el la ultima combinacion de nombre en mayusculas |
|
|
389 | 390 | para el filename |
|
|
390 | 391 | """ |
|
|
391 | 392 | fullfilename = None |
|
|
392 | 393 | find_flag = False |
|
|
393 | 394 | filename = None |
|
|
394 | 395 | |
|
|
395 | 396 | prefixDirList = [None, 'd', 'D'] |
|
|
396 | 397 | if ext.lower() == ".r": # voltage |
|
|
397 | 398 | prefixFileList = ['d', 'D'] |
|
|
398 | 399 | elif ext.lower() == ".pdata": # spectra |
|
|
399 | 400 | prefixFileList = ['p', 'P'] |
|
|
400 | 401 | else: |
|
|
401 | 402 | return None, filename |
|
|
402 | 403 | |
|
|
403 | 404 | # barrido por las combinaciones posibles |
|
|
404 | 405 | for prefixDir in prefixDirList: |
|
|
405 | 406 | thispath = path |
|
|
406 | 407 | if prefixDir != None: |
|
|
407 | 408 | # formo el nombre del directorio xYYYYDDD (x=d o x=D) |
|
|
408 | 409 | if foldercounter == 0: |
|
|
409 | 410 | thispath = os.path.join(path, "%s%04d%03d" % |
|
|
410 | 411 | (prefixDir, year, doy)) |
|
|
411 | 412 | else: |
|
|
412 | 413 | thispath = os.path.join(path, "%s%04d%03d_%02d" % ( |
|
|
413 | 414 | prefixDir, year, doy, foldercounter)) |
|
|
414 | 415 | for prefixFile in prefixFileList: # barrido por las dos combinaciones posibles de "D" |
|
|
415 | 416 | # formo el nombre del file xYYYYDDDSSS.ext |
|
|
416 | 417 | filename = "%s%04d%03d%03d%s" % (prefixFile, year, doy, set, ext) |
|
|
417 | 418 | fullfilename = os.path.join( |
|
|
418 | 419 | thispath, filename) # formo el path completo |
|
|
419 | 420 | |
|
|
420 | 421 | if os.path.exists(fullfilename): # verifico que exista |
|
|
421 | 422 | find_flag = True |
|
|
422 | 423 | break |
|
|
423 | 424 | if find_flag: |
|
|
424 | 425 | break |
|
|
425 | 426 | |
|
|
426 | 427 | if not(find_flag): |
|
|
427 | 428 | return None, filename |
|
|
428 | 429 | |
|
|
429 | 430 | return fullfilename, filename |
|
|
430 | 431 | |
|
|
431 | 432 | |
|
|
432 | 433 | def isRadarFolder(folder): |
|
|
433 | 434 | try: |
|
|
434 | 435 | year = int(folder[1:5]) |
|
|
435 | 436 | doy = int(folder[5:8]) |
|
|
436 | 437 | except: |
|
|
437 | 438 | return 0 |
|
|
438 | 439 | |
|
|
439 | 440 | return 1 |
|
|
440 | 441 | |
|
|
441 | 442 | |
|
|
442 | 443 | def isRadarFile(file): |
|
|
443 | 444 | try: |
|
|
444 | 445 | year = int(file[1:5]) |
|
|
445 | 446 | doy = int(file[5:8]) |
|
|
446 | 447 | set = int(file[8:11]) |
|
|
447 | 448 | except: |
|
|
448 | 449 | return 0 |
|
|
449 | 450 | |
|
|
450 | 451 | return 1 |
|
|
451 | 452 | |
|
|
452 | 453 | |
|
|
453 | 454 | def getDateFromRadarFile(file): |
|
|
454 | 455 | try: |
|
|
455 | 456 | year = int(file[1:5]) |
|
|
456 | 457 | doy = int(file[5:8]) |
|
|
457 | 458 | set = int(file[8:11]) |
|
|
458 | 459 | except: |
|
|
459 | 460 | return None |
|
|
460 | 461 | |
|
|
461 | 462 | thisDate = datetime.date(year, 1, 1) + datetime.timedelta(doy - 1) |
|
|
462 | 463 | return thisDate |
|
|
463 | 464 | |
|
|
464 | 465 | |
|
|
465 | 466 | def getDateFromRadarFolder(folder): |
|
|
466 | 467 | try: |
|
|
467 | 468 | year = int(folder[1:5]) |
|
|
468 | 469 | doy = int(folder[5:8]) |
|
|
469 | 470 | except: |
|
|
470 | 471 | return None |
|
|
471 | 472 | |
|
|
472 | 473 | thisDate = datetime.date(year, 1, 1) + datetime.timedelta(doy - 1) |
|
|
473 | 474 | return thisDate |
|
|
474 | 475 | |
|
|
475 | 476 | |
|
|
476 | 477 | class JRODataIO: |
|
|
477 | 478 | |
|
|
478 | 479 | c = 3E8 |
|
|
479 | 480 | |
|
|
480 | 481 | isConfig = False |
|
|
481 | 482 | |
|
|
482 | 483 | basicHeaderObj = None |
|
|
483 | 484 | |
|
|
484 | 485 | systemHeaderObj = None |
|
|
485 | 486 | |
|
|
486 | 487 | radarControllerHeaderObj = None |
|
|
487 | 488 | |
|
|
488 | 489 | processingHeaderObj = None |
|
|
489 | 490 | |
|
|
490 | 491 | dtype = None |
|
|
491 | 492 | |
|
|
492 | 493 | pathList = [] |
|
|
493 | 494 | |
|
|
494 | 495 | filenameList = [] |
|
|
495 | 496 | |
|
|
496 | 497 | filename = None |
|
|
497 | 498 | |
|
|
498 | 499 | ext = None |
|
|
499 | 500 | |
|
|
500 | 501 | flagIsNewFile = 1 |
|
|
501 | 502 | |
|
|
502 | 503 | flagDiscontinuousBlock = 0 |
|
|
503 | 504 | |
|
|
504 | 505 | flagIsNewBlock = 0 |
|
|
505 | 506 | |
|
|
506 | 507 | fp = None |
|
|
507 | 508 | |
|
|
508 | 509 | firstHeaderSize = 0 |
|
|
509 | 510 | |
|
|
510 | 511 | basicHeaderSize = 24 |
|
|
511 | 512 | |
|
|
512 | 513 | versionFile = 1103 |
|
|
513 | 514 | |
|
|
514 | 515 | fileSize = None |
|
|
515 | 516 | |
|
|
516 | 517 | # ippSeconds = None |
|
|
517 | 518 | |
|
|
518 | 519 | fileSizeByHeader = None |
|
|
519 | 520 | |
|
|
520 | 521 | fileIndex = None |
|
|
521 | 522 | |
|
|
522 | 523 | profileIndex = None |
|
|
523 | 524 | |
|
|
524 | 525 | blockIndex = None |
|
|
525 | 526 | |
|
|
526 | 527 | nTotalBlocks = None |
|
|
527 | 528 | |
|
|
528 | 529 | maxTimeStep = 30 |
|
|
529 | 530 | |
|
|
530 | 531 | lastUTTime = None |
|
|
531 | 532 | |
|
|
532 | 533 | datablock = None |
|
|
533 | 534 | |
|
|
534 | 535 | dataOut = None |
|
|
535 | 536 | |
|
|
536 | 537 | blocksize = None |
|
|
537 | 538 | |
|
|
538 | 539 | getByBlock = False |
|
|
539 | 540 | |
|
|
540 | 541 | def __init__(self): |
|
|
541 | 542 | |
|
|
542 | 543 | raise NotImplementedError |
|
|
543 | 544 | |
|
|
544 | 545 | def run(self): |
|
|
545 | 546 | |
|
|
546 | 547 | raise NotImplementedError |
|
|
547 | 548 | |
|
|
548 | 549 | def getDtypeWidth(self): |
|
|
549 | 550 | |
|
|
550 | 551 | dtype_index = get_dtype_index(self.dtype) |
|
|
551 | 552 | dtype_width = get_dtype_width(dtype_index) |
|
|
552 | 553 | |
|
|
553 | 554 | return dtype_width |
|
|
554 | 555 | |
|
|
555 | 556 | def getAllowedArgs(self): |
|
|
556 | 557 | if hasattr(self, '__attrs__'): |
|
|
557 | 558 | return self.__attrs__ |
|
|
558 | 559 | else: |
|
|
559 | 560 | return inspect.getargspec(self.run).args |
|
|
560 | 561 | |
|
|
561 | 562 | |
|
|
562 | 563 | class JRODataReader(JRODataIO): |
|
|
563 | 564 | |
|
|
564 | 565 | online = 0 |
|
|
565 | 566 | |
|
|
566 | 567 | realtime = 0 |
|
|
567 | 568 | |
|
|
568 | 569 | nReadBlocks = 0 |
|
|
569 | 570 | |
|
|
570 | 571 | delay = 10 # number of seconds waiting a new file |
|
|
571 | 572 | |
|
|
572 | 573 | nTries = 3 # quantity tries |
|
|
573 | 574 | |
|
|
574 | 575 | nFiles = 3 # number of files for searching |
|
|
575 | 576 | |
|
|
576 | 577 | path = None |
|
|
577 | 578 | |
|
|
578 | 579 | foldercounter = 0 |
|
|
579 | 580 | |
|
|
580 | 581 | flagNoMoreFiles = 0 |
|
|
581 | 582 | |
|
|
582 | 583 | datetimeList = [] |
|
|
583 | 584 | |
|
|
584 | 585 | __isFirstTimeOnline = 1 |
|
|
585 | 586 | |
|
|
586 | 587 | __printInfo = True |
|
|
587 | 588 | |
|
|
588 | 589 | profileIndex = None |
|
|
589 | 590 | |
|
|
590 | 591 | nTxs = 1 |
|
|
591 | 592 | |
|
|
592 | 593 | txIndex = None |
|
|
593 | 594 | |
|
|
594 | 595 | # Added-------------------- |
|
|
595 | 596 | |
|
|
596 | 597 | selBlocksize = None |
|
|
597 | 598 | |
|
|
598 | 599 | selBlocktime = None |
|
|
599 | 600 | |
|
|
600 | 601 | def __init__(self): |
|
|
601 | 602 | """ |
|
|
602 | 603 | This class is used to find data files |
|
|
603 | 604 | |
|
|
604 | 605 | Example: |
|
|
605 | 606 | reader = JRODataReader() |
|
|
606 | 607 | fileList = reader.findDataFiles() |
|
|
607 | 608 | |
|
|
608 | 609 | """ |
|
|
609 | 610 | pass |
|
|
610 | 611 | |
|
|
611 | 612 | def createObjByDefault(self): |
|
|
612 | 613 | """ |
|
|
613 | 614 | |
|
|
614 | 615 | """ |
|
|
615 | 616 | raise NotImplementedError |
|
|
616 | 617 | |
|
|
617 | 618 | def getBlockDimension(self): |
|
|
618 | 619 | |
|
|
619 | 620 | raise NotImplementedError |
|
|
620 | 621 | |
|
|
621 | 622 | def searchFilesOffLine(self, |
|
|
622 | 623 | path, |
|
|
623 | 624 | startDate=None, |
|
|
624 | 625 | endDate=None, |
|
|
625 | 626 | startTime=datetime.time(0, 0, 0), |
|
|
626 | 627 | endTime=datetime.time(23, 59, 59), |
|
|
627 | 628 | set=None, |
|
|
628 | 629 | expLabel='', |
|
|
629 | 630 | ext='.r', |
|
|
630 | 631 | cursor=None, |
|
|
631 | 632 | skip=None, |
|
|
632 | 633 | walk=True): |
|
|
633 | 634 | |
|
|
634 | 635 | self.filenameList = [] |
|
|
635 | 636 | self.datetimeList = [] |
|
|
636 | 637 | |
|
|
637 | 638 | pathList = [] |
|
|
638 | 639 | |
|
|
639 | 640 | dateList, pathList = self.findDatafiles( |
|
|
640 | 641 | path, startDate, endDate, expLabel, ext, walk, include_path=True) |
|
|
641 | 642 | |
|
|
642 | 643 | if dateList == []: |
|
|
643 | 644 | return [], [] |
|
|
644 | 645 | |
|
|
645 | 646 | if len(dateList) > 1: |
|
|
646 | 647 | print "[Reading] Data found for date range [%s - %s]: total days = %d" % (startDate, endDate, len(dateList)) |
|
|
647 | 648 | else: |
|
|
648 | 649 | print "[Reading] Data found for date range [%s - %s]: date = %s" % (startDate, endDate, dateList[0]) |
|
|
649 | 650 | |
|
|
650 | 651 | filenameList = [] |
|
|
651 | 652 | datetimeList = [] |
|
|
652 | 653 | |
|
|
653 | 654 | for thisPath in pathList: |
|
|
654 | 655 | |
|
|
655 | 656 | fileList = glob.glob1(thisPath, "*%s" % ext) |
|
|
656 | 657 | fileList.sort() |
|
|
657 | 658 | |
|
|
658 |
|
|
|
|
659 | ||
|
|
660 | if cursor is not None and skip is not None: | |
|
|
661 | ||
|
|
662 | if skip == 0: | |
|
|
663 | skippedFileList = [] | |
|
|
664 | else: | |
|
|
665 | skippedFileList = fileList[cursor * | |
|
|
666 | skip: cursor * skip + skip] | |
|
|
667 | ||
|
|
668 | else: | |
|
|
669 | skippedFileList = fileList | |
|
|
670 | ||
|
|
671 | for file in skippedFileList: | |
|
|
659 | for file in fileList: | |
|
|
672 | 660 | |
|
|
673 | 661 | filename = os.path.join(thisPath, file) |
|
|
674 | 662 | |
|
|
675 | 663 | if not isFileInDateRange(filename, startDate, endDate): |
|
|
676 | 664 | continue |
|
|
677 | 665 | |
|
|
678 | 666 | thisDatetime = isFileInTimeRange( |
|
|
679 | 667 | filename, startDate, endDate, startTime, endTime) |
|
|
680 | 668 | |
|
|
681 | 669 | if not(thisDatetime): |
|
|
682 | 670 | continue |
|
|
683 | 671 | |
|
|
684 | 672 | filenameList.append(filename) |
|
|
685 | 673 | datetimeList.append(thisDatetime) |
|
|
686 | 674 | |
|
|
675 | if cursor is not None and skip is not None: | |
|
|
676 | filenameList = filenameList[cursor * skip:cursor * skip + skip] | |
|
|
677 | datetimeList = datetimeList[cursor * skip:cursor * skip + skip] | |
|
|
678 | ||
|
|
687 | 679 | if not(filenameList): |
|
|
688 | 680 | print "[Reading] Time range selected invalid [%s - %s]: No *%s files in %s)" % (startTime, endTime, ext, path) |
|
|
689 | 681 | return [], [] |
|
|
690 | 682 | |
|
|
691 | 683 | print "[Reading] %d file(s) was(were) found in time range: %s - %s" % (len(filenameList), startTime, endTime) |
|
|
692 | ||
|
|
693 | 684 | |
|
|
694 | 685 | # for i in range(len(filenameList)): |
|
|
695 | 686 | # print "[Reading] %s -> [%s]" %(filenameList[i], datetimeList[i].ctime()) |
|
|
696 | 687 | |
|
|
697 | 688 | self.filenameList = filenameList |
|
|
698 | 689 | self.datetimeList = datetimeList |
|
|
699 | 690 | |
|
|
700 | 691 | return pathList, filenameList |
|
|
701 | 692 | |
|
|
702 | 693 | def __searchFilesOnLine(self, path, expLabel="", ext=None, walk=True, set=None): |
|
|
703 | 694 | """ |
|
|
704 | 695 | Busca el ultimo archivo de la ultima carpeta (determinada o no por startDateTime) y |
|
|
705 | 696 | devuelve el archivo encontrado ademas de otros datos. |
|
|
706 | 697 | |
|
|
707 | 698 | Input: |
|
|
708 | 699 | path : carpeta donde estan contenidos los files que contiene data |
|
|
709 | 700 | |
|
|
710 | 701 | expLabel : Nombre del subexperimento (subfolder) |
|
|
711 | 702 | |
|
|
712 | 703 | ext : extension de los files |
|
|
713 | 704 | |
|
|
714 | 705 | walk : Si es habilitado no realiza busquedas dentro de los ubdirectorios (doypath) |
|
|
715 | 706 | |
|
|
716 | 707 | Return: |
|
|
717 | 708 | directory : eL directorio donde esta el file encontrado |
|
|
718 | 709 | filename : el ultimo file de una determinada carpeta |
|
|
719 | 710 | year : el anho |
|
|
720 | 711 | doy : el numero de dia del anho |
|
|
721 | 712 | set : el set del archivo |
|
|
722 | 713 | |
|
|
723 | 714 | |
|
|
724 | 715 | """ |
|
|
725 | 716 | if not os.path.isdir(path): |
|
|
726 | 717 | return None, None, None, None, None, None |
|
|
727 | 718 | |
|
|
728 | 719 | dirList = [] |
|
|
729 | 720 | |
|
|
730 | 721 | if not walk: |
|
|
731 | 722 | fullpath = path |
|
|
732 | 723 | foldercounter = 0 |
|
|
733 | 724 | else: |
|
|
734 | 725 | # Filtra solo los directorios |
|
|
735 | 726 | for thisPath in os.listdir(path): |
|
|
736 | 727 | if not os.path.isdir(os.path.join(path, thisPath)): |
|
|
737 | 728 | continue |
|
|
738 | 729 | if not isRadarFolder(thisPath): |
|
|
739 | 730 | continue |
|
|
740 | 731 | |
|
|
741 | 732 | dirList.append(thisPath) |
|
|
742 | 733 | |
|
|
743 | 734 | if not(dirList): |
|
|
744 | 735 | return None, None, None, None, None, None |
|
|
745 | 736 | |
|
|
746 | 737 | dirList = sorted(dirList, key=str.lower) |
|
|
747 | 738 | |
|
|
748 | 739 | doypath = dirList[-1] |
|
|
749 | 740 | foldercounter = int(doypath.split('_')[1]) if len( |
|
|
750 | 741 | doypath.split('_')) > 1 else 0 |
|
|
751 | 742 | fullpath = os.path.join(path, doypath, expLabel) |
|
|
752 | 743 | |
|
|
753 | 744 | print "[Reading] %s folder was found: " % (fullpath) |
|
|
754 | 745 | |
|
|
755 | 746 | if set == None: |
|
|
756 | 747 | filename = getlastFileFromPath(fullpath, ext) |
|
|
757 | 748 | else: |
|
|
758 | 749 | filename = getFileFromSet(fullpath, ext, set) |
|
|
759 | 750 | |
|
|
760 | 751 | if not(filename): |
|
|
761 | 752 | return None, None, None, None, None, None |
|
|
762 | 753 | |
|
|
763 | 754 | print "[Reading] %s file was found" % (filename) |
|
|
764 | 755 | |
|
|
765 | 756 | if not(self.__verifyFile(os.path.join(fullpath, filename))): |
|
|
766 | 757 | return None, None, None, None, None, None |
|
|
767 | 758 | |
|
|
768 | 759 | year = int(filename[1:5]) |
|
|
769 | 760 | doy = int(filename[5:8]) |
|
|
770 | 761 | set = int(filename[8:11]) |
|
|
771 | 762 | |
|
|
772 | 763 | return fullpath, foldercounter, filename, year, doy, set |
|
|
773 | 764 | |
|
|
774 | 765 | def __setNextFileOffline(self): |
|
|
775 | 766 | |
|
|
776 | 767 | idFile = self.fileIndex |
|
|
777 | 768 | |
|
|
778 | 769 | while (True): |
|
|
779 | 770 | idFile += 1 |
|
|
780 | 771 | if not(idFile < len(self.filenameList)): |
|
|
781 | 772 | self.flagNoMoreFiles = 1 |
|
|
782 | 773 | # print "[Reading] No more Files" |
|
|
783 | 774 | return 0 |
|
|
784 | 775 | |
|
|
785 | 776 | filename = self.filenameList[idFile] |
|
|
786 | 777 | |
|
|
787 | 778 | if not(self.__verifyFile(filename)): |
|
|
788 | 779 | continue |
|
|
789 | 780 | |
|
|
790 | 781 | fileSize = os.path.getsize(filename) |
|
|
791 | 782 | fp = open(filename, 'rb') |
|
|
792 | 783 | break |
|
|
793 | 784 | |
|
|
794 | 785 | self.flagIsNewFile = 1 |
|
|
795 | 786 | self.fileIndex = idFile |
|
|
796 | 787 | self.filename = filename |
|
|
797 | 788 | self.fileSize = fileSize |
|
|
798 | 789 | self.fp = fp |
|
|
799 | 790 | |
|
|
800 | 791 | # print "[Reading] Setting the file: %s"%self.filename |
|
|
801 | 792 | |
|
|
802 | 793 | return 1 |
|
|
803 | 794 | |
|
|
804 | 795 | def __setNextFileOnline(self): |
|
|
805 | 796 | """ |
|
|
806 | 797 | Busca el siguiente file que tenga suficiente data para ser leida, dentro de un folder especifico, si |
|
|
807 | 798 | no encuentra un file valido espera un tiempo determinado y luego busca en los posibles n files |
|
|
808 | 799 | siguientes. |
|
|
809 | 800 | |
|
|
810 | 801 | Affected: |
|
|
811 | 802 | self.flagIsNewFile |
|
|
812 | 803 | self.filename |
|
|
813 | 804 | self.fileSize |
|
|
814 | 805 | self.fp |
|
|
815 | 806 | self.set |
|
|
816 | 807 | self.flagNoMoreFiles |
|
|
817 | 808 | |
|
|
818 | 809 | Return: |
|
|
819 | 810 | 0 : si luego de una busqueda del siguiente file valido este no pudo ser encontrado |
|
|
820 | 811 | 1 : si el file fue abierto con exito y esta listo a ser leido |
|
|
821 | 812 | |
|
|
822 | 813 | Excepciones: |
|
|
823 | 814 | Si un determinado file no puede ser abierto |
|
|
824 | 815 | """ |
|
|
825 | 816 | nFiles = 0 |
|
|
826 | 817 | fileOk_flag = False |
|
|
827 | 818 | firstTime_flag = True |
|
|
828 | 819 | |
|
|
829 | 820 | self.set += 1 |
|
|
830 | 821 | |
|
|
831 | 822 | if self.set > 999: |
|
|
832 | 823 | self.set = 0 |
|
|
833 | 824 | self.foldercounter += 1 |
|
|
834 | 825 | |
|
|
835 | 826 | # busca el 1er file disponible |
|
|
836 | 827 | fullfilename, filename = checkForRealPath( |
|
|
837 | 828 | self.path, self.foldercounter, self.year, self.doy, self.set, self.ext) |
|
|
838 | 829 | if fullfilename: |
|
|
839 | 830 | if self.__verifyFile(fullfilename, False): |
|
|
840 | 831 | fileOk_flag = True |
|
|
841 | 832 | |
|
|
842 | 833 | # si no encuentra un file entonces espera y vuelve a buscar |
|
|
843 | 834 | if not(fileOk_flag): |
|
|
844 | 835 | # busco en los siguientes self.nFiles+1 files posibles |
|
|
845 | 836 | for nFiles in range(self.nFiles + 1): |
|
|
846 | 837 | |
|
|
847 | 838 | if firstTime_flag: # si es la 1era vez entonces hace el for self.nTries veces |
|
|
848 | 839 | tries = self.nTries |
|
|
849 | 840 | else: |
|
|
850 | 841 | tries = 1 # si no es la 1era vez entonces solo lo hace una vez |
|
|
851 | 842 | |
|
|
852 | 843 | for nTries in range(tries): |
|
|
853 | 844 | if firstTime_flag: |
|
|
854 | 845 | print "\t[Reading] Waiting %0.2f sec for the next file: \"%s\" , try %03d ..." % (self.delay, filename, nTries + 1) |
|
|
855 | 846 | sleep(self.delay) |
|
|
856 | 847 | else: |
|
|
857 | 848 | print "\t[Reading] Searching the next \"%s%04d%03d%03d%s\" file ..." % (self.optchar, self.year, self.doy, self.set, self.ext) |
|
|
858 | 849 | |
|
|
859 | 850 | fullfilename, filename = checkForRealPath( |
|
|
860 | 851 | self.path, self.foldercounter, self.year, self.doy, self.set, self.ext) |
|
|
861 | 852 | if fullfilename: |
|
|
862 | 853 | if self.__verifyFile(fullfilename): |
|
|
863 | 854 | fileOk_flag = True |
|
|
864 | 855 | break |
|
|
865 | 856 | |
|
|
866 | 857 | if fileOk_flag: |
|
|
867 | 858 | break |
|
|
868 | 859 | |
|
|
869 | 860 | firstTime_flag = False |
|
|
870 | 861 | |
|
|
871 | 862 | print "\t[Reading] Skipping the file \"%s\" due to this file doesn't exist" % filename |
|
|
872 | 863 | self.set += 1 |
|
|
873 | 864 | |
|
|
874 | 865 | # si no encuentro el file buscado cambio de carpeta y busco en la siguiente carpeta |
|
|
875 | 866 | if nFiles == (self.nFiles - 1): |
|
|
876 | 867 | self.set = 0 |
|
|
877 | 868 | self.doy += 1 |
|
|
878 | 869 | self.foldercounter = 0 |
|
|
879 | 870 | |
|
|
880 | 871 | if fileOk_flag: |
|
|
881 | 872 | self.fileSize = os.path.getsize(fullfilename) |
|
|
882 | 873 | self.filename = fullfilename |
|
|
883 | 874 | self.flagIsNewFile = 1 |
|
|
884 | 875 | if self.fp != None: |
|
|
885 | 876 | self.fp.close() |
|
|
886 | 877 | self.fp = open(fullfilename, 'rb') |
|
|
887 | 878 | self.flagNoMoreFiles = 0 |
|
|
888 | 879 | # print '[Reading] Setting the file: %s' % fullfilename |
|
|
889 | 880 | else: |
|
|
890 | 881 | self.fileSize = 0 |
|
|
891 | 882 | self.filename = None |
|
|
892 | 883 | self.flagIsNewFile = 0 |
|
|
893 | 884 | self.fp = None |
|
|
894 | 885 | self.flagNoMoreFiles = 1 |
|
|
895 | 886 | # print '[Reading] No more files to read' |
|
|
896 | 887 | |
|
|
897 | 888 | return fileOk_flag |
|
|
898 | 889 | |
|
|
899 | 890 | def setNextFile(self): |
|
|
900 | 891 | if self.fp != None: |
|
|
901 | 892 | self.fp.close() |
|
|
902 | 893 | |
|
|
903 | 894 | if self.online: |
|
|
904 | 895 | newFile = self.__setNextFileOnline() |
|
|
905 | 896 | else: |
|
|
906 | 897 | newFile = self.__setNextFileOffline() |
|
|
907 | 898 | |
|
|
908 | 899 | if not(newFile): |
|
|
909 | 900 | print '[Reading] No more files to read' |
|
|
910 | 901 | return 0 |
|
|
911 | 902 | |
|
|
912 | 903 | if self.verbose: |
|
|
913 | 904 | print '[Reading] Setting the file: %s' % self.filename |
|
|
914 | 905 | |
|
|
915 | 906 | self.__readFirstHeader() |
|
|
916 | 907 | self.nReadBlocks = 0 |
|
|
917 | 908 | return 1 |
|
|
918 | 909 | |
|
|
919 | 910 | def __waitNewBlock(self): |
|
|
920 | 911 | """ |
|
|
921 | 912 | Return 1 si se encontro un nuevo bloque de datos, 0 de otra forma. |
|
|
922 | 913 | |
|
|
923 | 914 | Si el modo de lectura es OffLine siempre retorn 0 |
|
|
924 | 915 | """ |
|
|
925 | 916 | if not self.online: |
|
|
926 | 917 | return 0 |
|
|
927 | 918 | |
|
|
928 | 919 | if (self.nReadBlocks >= self.processingHeaderObj.dataBlocksPerFile): |
|
|
929 | 920 | return 0 |
|
|
930 | 921 | |
|
|
931 | 922 | currentPointer = self.fp.tell() |
|
|
932 | 923 | |
|
|
933 | 924 | neededSize = self.processingHeaderObj.blockSize + self.basicHeaderSize |
|
|
934 | 925 | |
|
|
935 | 926 | for nTries in range(self.nTries): |
|
|
936 | 927 | |
|
|
937 | 928 | self.fp.close() |
|
|
938 | 929 | self.fp = open(self.filename, 'rb') |
|
|
939 | 930 | self.fp.seek(currentPointer) |
|
|
940 | 931 | |
|
|
941 | 932 | self.fileSize = os.path.getsize(self.filename) |
|
|
942 | 933 | currentSize = self.fileSize - currentPointer |
|
|
943 | 934 | |
|
|
944 | 935 | if (currentSize >= neededSize): |
|
|
945 | 936 | self.basicHeaderObj.read(self.fp) |
|
|
946 | 937 | return 1 |
|
|
947 | 938 | |
|
|
948 | 939 | if self.fileSize == self.fileSizeByHeader: |
|
|
949 | 940 | # self.flagEoF = True |
|
|
950 | 941 | return 0 |
|
|
951 | 942 | |
|
|
952 | 943 | print "[Reading] Waiting %0.2f seconds for the next block, try %03d ..." % (self.delay, nTries + 1) |
|
|
953 | 944 | sleep(self.delay) |
|
|
954 | 945 | |
|
|
955 | 946 | return 0 |
|
|
956 | 947 | |
|
|
957 | 948 | def waitDataBlock(self, pointer_location): |
|
|
958 | 949 | |
|
|
959 | 950 | currentPointer = pointer_location |
|
|
960 | 951 | |
|
|
961 | 952 | neededSize = self.processingHeaderObj.blockSize # + self.basicHeaderSize |
|
|
962 | 953 | |
|
|
963 | 954 | for nTries in range(self.nTries): |
|
|
964 | 955 | self.fp.close() |
|
|
965 | 956 | self.fp = open(self.filename, 'rb') |
|
|
966 | 957 | self.fp.seek(currentPointer) |
|
|
967 | 958 | |
|
|
968 | 959 | self.fileSize = os.path.getsize(self.filename) |
|
|
969 | 960 | currentSize = self.fileSize - currentPointer |
|
|
970 | 961 | |
|
|
971 | 962 | if (currentSize >= neededSize): |
|
|
972 | 963 | return 1 |
|
|
973 | 964 | |
|
|
974 | 965 | print "[Reading] Waiting %0.2f seconds for the next block, try %03d ..." % (self.delay, nTries + 1) |
|
|
975 | 966 | sleep(self.delay) |
|
|
976 | 967 | |
|
|
977 | 968 | return 0 |
|
|
978 | 969 | |
|
|
979 | 970 | def __jumpToLastBlock(self): |
|
|
980 | 971 | |
|
|
981 | 972 | if not(self.__isFirstTimeOnline): |
|
|
982 | 973 | return |
|
|
983 | 974 | |
|
|
984 | 975 | csize = self.fileSize - self.fp.tell() |
|
|
985 | 976 | blocksize = self.processingHeaderObj.blockSize |
|
|
986 | 977 | |
|
|
987 | 978 | # salta el primer bloque de datos |
|
|
988 | 979 | if csize > self.processingHeaderObj.blockSize: |
|
|
989 | 980 | self.fp.seek(self.fp.tell() + blocksize) |
|
|
990 | 981 | else: |
|
|
991 | 982 | return |
|
|
992 | 983 | |
|
|
993 | 984 | csize = self.fileSize - self.fp.tell() |
|
|
994 | 985 | neededsize = self.processingHeaderObj.blockSize + self.basicHeaderSize |
|
|
995 | 986 | while True: |
|
|
996 | 987 | |
|
|
997 | 988 | if self.fp.tell() < self.fileSize: |
|
|
998 | 989 | self.fp.seek(self.fp.tell() + neededsize) |
|
|
999 | 990 | else: |
|
|
1000 | 991 | self.fp.seek(self.fp.tell() - neededsize) |
|
|
1001 | 992 | break |
|
|
1002 | 993 | |
|
|
1003 | 994 | # csize = self.fileSize - self.fp.tell() |
|
|
1004 | 995 | # neededsize = self.processingHeaderObj.blockSize + self.basicHeaderSize |
|
|
1005 | 996 | # factor = int(csize/neededsize) |
|
|
1006 | 997 | # if factor > 0: |
|
|
1007 | 998 | # self.fp.seek(self.fp.tell() + factor*neededsize) |
|
|
1008 | 999 | |
|
|
1009 | 1000 | self.flagIsNewFile = 0 |
|
|
1010 | 1001 | self.__isFirstTimeOnline = 0 |
|
|
1011 | 1002 | |
|
|
1012 | 1003 | def __setNewBlock(self): |
|
|
1013 | 1004 | # if self.server is None: |
|
|
1014 | 1005 | if self.fp == None: |
|
|
1015 | 1006 | return 0 |
|
|
1016 | 1007 | |
|
|
1017 | 1008 | # if self.online: |
|
|
1018 | 1009 | # self.__jumpToLastBlock() |
|
|
1019 | 1010 | |
|
|
1020 | 1011 | if self.flagIsNewFile: |
|
|
1021 | 1012 | self.lastUTTime = self.basicHeaderObj.utc |
|
|
1022 | 1013 | return 1 |
|
|
1023 | 1014 | |
|
|
1024 | 1015 | if self.realtime: |
|
|
1025 | 1016 | self.flagDiscontinuousBlock = 1 |
|
|
1026 | 1017 | if not(self.setNextFile()): |
|
|
1027 | 1018 | return 0 |
|
|
1028 | 1019 | else: |
|
|
1029 | 1020 | return 1 |
|
|
1030 | 1021 | # if self.server is None: |
|
|
1031 | 1022 | currentSize = self.fileSize - self.fp.tell() |
|
|
1032 | 1023 | neededSize = self.processingHeaderObj.blockSize + self.basicHeaderSize |
|
|
1033 | 1024 | if (currentSize >= neededSize): |
|
|
1034 | 1025 | self.basicHeaderObj.read(self.fp) |
|
|
1035 | 1026 | self.lastUTTime = self.basicHeaderObj.utc |
|
|
1036 | 1027 | return 1 |
|
|
1037 | 1028 | # else: |
|
|
1038 | 1029 | # self.basicHeaderObj.read(self.zHeader) |
|
|
1039 | 1030 | # self.lastUTTime = self.basicHeaderObj.utc |
|
|
1040 | 1031 | # return 1 |
|
|
1041 | 1032 | if self.__waitNewBlock(): |
|
|
1042 | 1033 | self.lastUTTime = self.basicHeaderObj.utc |
|
|
1043 | 1034 | return 1 |
|
|
1044 | 1035 | # if self.server is None: |
|
|
1045 | 1036 | if not(self.setNextFile()): |
|
|
1046 | 1037 | return 0 |
|
|
1047 | 1038 | |
|
|
1048 | 1039 | deltaTime = self.basicHeaderObj.utc - self.lastUTTime |
|
|
1049 | 1040 | self.lastUTTime = self.basicHeaderObj.utc |
|
|
1050 | 1041 | |
|
|
1051 | 1042 | self.flagDiscontinuousBlock = 0 |
|
|
1052 | 1043 | |
|
|
1053 | 1044 | if deltaTime > self.maxTimeStep: |
|
|
1054 | 1045 | self.flagDiscontinuousBlock = 1 |
|
|
1055 | 1046 | |
|
|
1056 | 1047 | return 1 |
|
|
1057 | 1048 | |
|
|
1058 | 1049 | def readNextBlock(self): |
|
|
1059 | 1050 | |
|
|
1060 | 1051 | # Skip block out of startTime and endTime |
|
|
1061 | 1052 | while True: |
|
|
1062 | 1053 | if not(self.__setNewBlock()): |
|
|
1063 | 1054 | return 0 |
|
|
1064 | 1055 | |
|
|
1065 | 1056 | if not(self.readBlock()): |
|
|
1066 | 1057 | return 0 |
|
|
1067 | 1058 | |
|
|
1068 | 1059 | self.getBasicHeader() |
|
|
1069 | 1060 | if (self.dataOut.datatime < datetime.datetime.combine(self.startDate, self.startTime)) or (self.dataOut.datatime > datetime.datetime.combine(self.endDate, self.endTime)): |
|
|
1070 | 1061 | print "[Reading] Block No. %d/%d -> %s [Skipping]" % (self.nReadBlocks, |
|
|
1071 | 1062 | self.processingHeaderObj.dataBlocksPerFile, |
|
|
1072 | 1063 | self.dataOut.datatime.ctime()) |
|
|
1073 | 1064 | continue |
|
|
1074 | 1065 | |
|
|
1075 | 1066 | break |
|
|
1076 | 1067 | |
|
|
1077 | 1068 | if self.verbose: |
|
|
1078 | 1069 | print "[Reading] Block No. %d/%d -> %s" % (self.nReadBlocks, |
|
|
1079 | 1070 | self.processingHeaderObj.dataBlocksPerFile, |
|
|
1080 | 1071 | self.dataOut.datatime.ctime()) |
|
|
1081 | 1072 | return 1 |
|
|
1082 | 1073 | |
|
|
1083 | 1074 | def __readFirstHeader(self): |
|
|
1084 | 1075 | |
|
|
1085 | 1076 | self.basicHeaderObj.read(self.fp) |
|
|
1086 | 1077 | self.systemHeaderObj.read(self.fp) |
|
|
1087 | 1078 | self.radarControllerHeaderObj.read(self.fp) |
|
|
1088 | 1079 | self.processingHeaderObj.read(self.fp) |
|
|
1089 | 1080 | |
|
|
1090 | 1081 | self.firstHeaderSize = self.basicHeaderObj.size |
|
|
1091 | 1082 | |
|
|
1092 | 1083 | datatype = int(numpy.log2((self.processingHeaderObj.processFlags & |
|
|
1093 | 1084 | PROCFLAG.DATATYPE_MASK)) - numpy.log2(PROCFLAG.DATATYPE_CHAR)) |
|
|
1094 | 1085 | if datatype == 0: |
|
|
1095 | 1086 | datatype_str = numpy.dtype([('real', '<i1'), ('imag', '<i1')]) |
|
|
1096 | 1087 | elif datatype == 1: |
|
|
1097 | 1088 | datatype_str = numpy.dtype([('real', '<i2'), ('imag', '<i2')]) |
|
|
1098 | 1089 | elif datatype == 2: |
|
|
1099 | 1090 | datatype_str = numpy.dtype([('real', '<i4'), ('imag', '<i4')]) |
|
|
1100 | 1091 | elif datatype == 3: |
|
|
1101 | 1092 | datatype_str = numpy.dtype([('real', '<i8'), ('imag', '<i8')]) |
|
|
1102 | 1093 | elif datatype == 4: |
|
|
1103 | 1094 | datatype_str = numpy.dtype([('real', '<f4'), ('imag', '<f4')]) |
|
|
1104 | 1095 | elif datatype == 5: |
|
|
1105 | 1096 | datatype_str = numpy.dtype([('real', '<f8'), ('imag', '<f8')]) |
|
|
1106 | 1097 | else: |
|
|
1107 | 1098 | raise ValueError, 'Data type was not defined' |
|
|
1108 | 1099 | |
|
|
1109 | 1100 | self.dtype = datatype_str |
|
|
1110 | 1101 | #self.ippSeconds = 2 * 1000 * self.radarControllerHeaderObj.ipp / self.c |
|
|
1111 | 1102 | self.fileSizeByHeader = self.processingHeaderObj.dataBlocksPerFile * self.processingHeaderObj.blockSize + \ |
|
|
1112 | 1103 | self.firstHeaderSize + self.basicHeaderSize * \ |
|
|
1113 | 1104 | (self.processingHeaderObj.dataBlocksPerFile - 1) |
|
|
1114 | 1105 | # self.dataOut.channelList = numpy.arange(self.systemHeaderObj.numChannels) |
|
|
1115 | 1106 | # self.dataOut.channelIndexList = numpy.arange(self.systemHeaderObj.numChannels) |
|
|
1116 | 1107 | self.getBlockDimension() |
|
|
1117 | 1108 | |
|
|
1118 | 1109 | def __verifyFile(self, filename, msgFlag=True): |
|
|
1119 | 1110 | |
|
|
1120 | 1111 | msg = None |
|
|
1121 | 1112 | |
|
|
1122 | 1113 | try: |
|
|
1123 | 1114 | fp = open(filename, 'rb') |
|
|
1124 | 1115 | except IOError: |
|
|
1125 | 1116 | |
|
|
1126 | 1117 | if msgFlag: |
|
|
1127 | 1118 | print "[Reading] File %s can't be opened" % (filename) |
|
|
1128 | 1119 | |
|
|
1129 | 1120 | return False |
|
|
1130 | 1121 | |
|
|
1131 | 1122 | currentPosition = fp.tell() |
|
|
1132 | 1123 | neededSize = self.processingHeaderObj.blockSize + self.firstHeaderSize |
|
|
1133 | 1124 | |
|
|
1134 | 1125 | if neededSize == 0: |
|
|
1135 | 1126 | basicHeaderObj = BasicHeader(LOCALTIME) |
|
|
1136 | 1127 | systemHeaderObj = SystemHeader() |
|
|
1137 | 1128 | radarControllerHeaderObj = RadarControllerHeader() |
|
|
1138 | 1129 | processingHeaderObj = ProcessingHeader() |
|
|
1139 | 1130 | |
|
|
1140 | 1131 | if not(basicHeaderObj.read(fp)): |
|
|
1141 | 1132 | fp.close() |
|
|
1142 | 1133 | return False |
|
|
1143 | 1134 | |
|
|
1144 | 1135 | if not(systemHeaderObj.read(fp)): |
|
|
1145 | 1136 | fp.close() |
|
|
1146 | 1137 | return False |
|
|
1147 | 1138 | |
|
|
1148 | 1139 | if not(radarControllerHeaderObj.read(fp)): |
|
|
1149 | 1140 | fp.close() |
|
|
1150 | 1141 | return False |
|
|
1151 | 1142 | |
|
|
1152 | 1143 | if not(processingHeaderObj.read(fp)): |
|
|
1153 | 1144 | fp.close() |
|
|
1154 | 1145 | return False |
|
|
1155 | 1146 | |
|
|
1156 | 1147 | neededSize = processingHeaderObj.blockSize + basicHeaderObj.size |
|
|
1157 | 1148 | else: |
|
|
1158 | 1149 | msg = "[Reading] Skipping the file %s due to it hasn't enough data" % filename |
|
|
1159 | 1150 | |
|
|
1160 | 1151 | fp.close() |
|
|
1161 | 1152 | |
|
|
1162 | 1153 | fileSize = os.path.getsize(filename) |
|
|
1163 | 1154 | currentSize = fileSize - currentPosition |
|
|
1164 | 1155 | |
|
|
1165 | 1156 | if currentSize < neededSize: |
|
|
1166 | 1157 | if msgFlag and (msg != None): |
|
|
1167 | 1158 | print msg |
|
|
1168 | 1159 | return False |
|
|
1169 | 1160 | |
|
|
1170 | 1161 | return True |
|
|
1171 | 1162 | |
|
|
1172 | 1163 | def findDatafiles(self, path, startDate=None, endDate=None, expLabel='', ext='.r', walk=True, include_path=False): |
|
|
1173 | 1164 | |
|
|
1174 | 1165 | path_empty = True |
|
|
1175 | 1166 | |
|
|
1176 | 1167 | dateList = [] |
|
|
1177 | 1168 | pathList = [] |
|
|
1178 | 1169 | |
|
|
1179 | 1170 | multi_path = path.split(',') |
|
|
1180 | 1171 | |
|
|
1181 | 1172 | if not walk: |
|
|
1182 | 1173 | |
|
|
1183 | 1174 | for single_path in multi_path: |
|
|
1184 | 1175 | |
|
|
1185 | 1176 | if not os.path.isdir(single_path): |
|
|
1186 | 1177 | continue |
|
|
1187 | 1178 | |
|
|
1188 | 1179 | fileList = glob.glob1(single_path, "*" + ext) |
|
|
1189 | 1180 | |
|
|
1190 | 1181 | if not fileList: |
|
|
1191 | 1182 | continue |
|
|
1192 | 1183 | |
|
|
1193 | 1184 | path_empty = False |
|
|
1194 | 1185 | |
|
|
1195 | 1186 | fileList.sort() |
|
|
1196 | 1187 | |
|
|
1197 | 1188 | for thisFile in fileList: |
|
|
1198 | 1189 | |
|
|
1199 | 1190 | if not os.path.isfile(os.path.join(single_path, thisFile)): |
|
|
1200 | 1191 | continue |
|
|
1201 | 1192 | |
|
|
1202 | 1193 | if not isRadarFile(thisFile): |
|
|
1203 | 1194 | continue |
|
|
1204 | 1195 | |
|
|
1205 | 1196 | if not isFileInDateRange(thisFile, startDate, endDate): |
|
|
1206 | 1197 | continue |
|
|
1207 | 1198 | |
|
|
1208 | 1199 | thisDate = getDateFromRadarFile(thisFile) |
|
|
1209 | 1200 | |
|
|
1210 | 1201 | if thisDate in dateList: |
|
|
1211 | 1202 | continue |
|
|
1212 | 1203 | |
|
|
1213 | 1204 | dateList.append(thisDate) |
|
|
1214 | 1205 | pathList.append(single_path) |
|
|
1215 | 1206 | |
|
|
1216 | 1207 | else: |
|
|
1217 | 1208 | for single_path in multi_path: |
|
|
1218 | 1209 | |
|
|
1219 | 1210 | if not os.path.isdir(single_path): |
|
|
1220 | 1211 | continue |
|
|
1221 | 1212 | |
|
|
1222 | 1213 | dirList = [] |
|
|
1223 | 1214 | |
|
|
1224 | 1215 | for thisPath in os.listdir(single_path): |
|
|
1225 | 1216 | |
|
|
1226 | 1217 | if not os.path.isdir(os.path.join(single_path, thisPath)): |
|
|
1227 | 1218 | continue |
|
|
1228 | 1219 | |
|
|
1229 | 1220 | if not isRadarFolder(thisPath): |
|
|
1230 | 1221 | continue |
|
|
1231 | 1222 | |
|
|
1232 | 1223 | if not isFolderInDateRange(thisPath, startDate, endDate): |
|
|
1233 | 1224 | continue |
|
|
1234 | 1225 | |
|
|
1235 | 1226 | dirList.append(thisPath) |
|
|
1236 | 1227 | |
|
|
1237 | 1228 | if not dirList: |
|
|
1238 | 1229 | continue |
|
|
1239 | 1230 | |
|
|
1240 | 1231 | dirList.sort() |
|
|
1241 | 1232 | |
|
|
1242 | 1233 | for thisDir in dirList: |
|
|
1243 | 1234 | |
|
|
1244 | 1235 | datapath = os.path.join(single_path, thisDir, expLabel) |
|
|
1245 | 1236 | fileList = glob.glob1(datapath, "*" + ext) |
|
|
1246 | 1237 | |
|
|
1247 | 1238 | if not fileList: |
|
|
1248 | 1239 | continue |
|
|
1249 | 1240 | |
|
|
1250 | 1241 | path_empty = False |
|
|
1251 | 1242 | |
|
|
1252 | 1243 | thisDate = getDateFromRadarFolder(thisDir) |
|
|
1253 | 1244 | |
|
|
1254 | 1245 | pathList.append(datapath) |
|
|
1255 | 1246 | dateList.append(thisDate) |
|
|
1256 | 1247 | |
|
|
1257 | 1248 | dateList.sort() |
|
|
1258 | 1249 | |
|
|
1259 | 1250 | if walk: |
|
|
1260 | 1251 | pattern_path = os.path.join(multi_path[0], "[dYYYYDDD]", expLabel) |
|
|
1261 | 1252 | else: |
|
|
1262 | 1253 | pattern_path = multi_path[0] |
|
|
1263 | 1254 | |
|
|
1264 | 1255 | if path_empty: |
|
|
1265 | 1256 | print "[Reading] No *%s files in %s for %s to %s" % (ext, pattern_path, startDate, endDate) |
|
|
1266 | 1257 | else: |
|
|
1267 | 1258 | if not dateList: |
|
|
1268 | 1259 | print "[Reading] Date range selected invalid [%s - %s]: No *%s files in %s)" % (startDate, endDate, ext, path) |
|
|
1269 | 1260 | |
|
|
1270 | 1261 | if include_path: |
|
|
1271 | 1262 | return dateList, pathList |
|
|
1272 | 1263 | |
|
|
1273 | 1264 | return dateList |
|
|
1274 | 1265 | |
|
|
1275 | 1266 | def setup(self, |
|
|
1276 | 1267 | path=None, |
|
|
1277 | 1268 | startDate=None, |
|
|
1278 | 1269 | endDate=None, |
|
|
1279 | 1270 | startTime=datetime.time(0, 0, 0), |
|
|
1280 | 1271 | endTime=datetime.time(23, 59, 59), |
|
|
1281 | 1272 | set=None, |
|
|
1282 | 1273 | expLabel="", |
|
|
1283 | 1274 | ext=None, |
|
|
1284 | 1275 | online=False, |
|
|
1285 | 1276 | delay=60, |
|
|
1286 | 1277 | walk=True, |
|
|
1287 | 1278 | getblock=False, |
|
|
1288 | 1279 | nTxs=1, |
|
|
1289 | 1280 | realtime=False, |
|
|
1290 | 1281 | blocksize=None, |
|
|
1291 | 1282 | blocktime=None, |
|
|
1292 | 1283 | skip=None, |
|
|
1293 | 1284 | cursor=None, |
|
|
1294 | 1285 | warnings=True, |
|
|
1295 | 1286 | verbose=True, |
|
|
1296 | 1287 | server=None, |
|
|
1297 | 1288 | format=None, |
|
|
1298 | 1289 | oneDDict=None, |
|
|
1299 | 1290 | twoDDict=None, |
|
|
1300 | 1291 | ind2DList=None): |
|
|
1301 | 1292 | if server is not None: |
|
|
1302 | 1293 | if 'tcp://' in server: |
|
|
1303 | 1294 | address = server |
|
|
1304 | 1295 | else: |
|
|
1305 | 1296 | address = 'ipc:///tmp/%s' % server |
|
|
1306 | 1297 | self.server = address |
|
|
1307 | 1298 | self.context = zmq.Context() |
|
|
1308 | 1299 | self.receiver = self.context.socket(zmq.PULL) |
|
|
1309 | 1300 | self.receiver.connect(self.server) |
|
|
1310 | 1301 | time.sleep(0.5) |
|
|
1311 | 1302 | print '[Starting] ReceiverData from {}'.format(self.server) |
|
|
1312 | 1303 | else: |
|
|
1313 | 1304 | self.server = None |
|
|
1314 | 1305 | if path == None: |
|
|
1315 | 1306 | raise ValueError, "[Reading] The path is not valid" |
|
|
1316 | 1307 | |
|
|
1317 | 1308 | if ext == None: |
|
|
1318 | 1309 | ext = self.ext |
|
|
1319 | 1310 | |
|
|
1320 | 1311 | if online: |
|
|
1321 | 1312 | print "[Reading] Searching files in online mode..." |
|
|
1322 | 1313 | |
|
|
1323 | 1314 | for nTries in range(self.nTries): |
|
|
1324 | 1315 | fullpath, foldercounter, file, year, doy, set = self.__searchFilesOnLine( |
|
|
1325 | 1316 | path=path, expLabel=expLabel, ext=ext, walk=walk, set=set) |
|
|
1326 | 1317 | |
|
|
1327 | 1318 | if fullpath: |
|
|
1328 | 1319 | break |
|
|
1329 | 1320 | |
|
|
1330 | 1321 | print '[Reading] Waiting %0.2f sec for an valid file in %s: try %02d ...' % (self.delay, path, nTries + 1) |
|
|
1331 | 1322 | sleep(self.delay) |
|
|
1332 | 1323 | |
|
|
1333 | 1324 | if not(fullpath): |
|
|
1334 | 1325 | print "[Reading] There 'isn't any valid file in %s" % path |
|
|
1335 | 1326 | return |
|
|
1336 | 1327 | |
|
|
1337 | 1328 | self.year = year |
|
|
1338 | 1329 | self.doy = doy |
|
|
1339 | 1330 | self.set = set - 1 |
|
|
1340 | 1331 | self.path = path |
|
|
1341 | 1332 | self.foldercounter = foldercounter |
|
|
1342 | 1333 | last_set = None |
|
|
1343 | 1334 | else: |
|
|
1344 | 1335 | print "[Reading] Searching files in offline mode ..." |
|
|
1345 | 1336 | pathList, filenameList = self.searchFilesOffLine(path, startDate=startDate, endDate=endDate, |
|
|
1346 | 1337 | startTime=startTime, endTime=endTime, |
|
|
1347 | 1338 | set=set, expLabel=expLabel, ext=ext, |
|
|
1348 | 1339 | walk=walk, cursor=cursor, |
|
|
1349 | 1340 | skip=skip) |
|
|
1350 | 1341 | |
|
|
1351 | 1342 | if not(pathList): |
|
|
1352 | 1343 | self.fileIndex = -1 |
|
|
1353 | 1344 | self.pathList = [] |
|
|
1354 | 1345 | self.filenameList = [] |
|
|
1355 | 1346 | return |
|
|
1356 | 1347 | |
|
|
1357 | 1348 | self.fileIndex = -1 |
|
|
1358 | 1349 | self.pathList = pathList |
|
|
1359 | 1350 | self.filenameList = filenameList |
|
|
1360 | 1351 | file_name = os.path.basename(filenameList[-1]) |
|
|
1361 | 1352 | basename, ext = os.path.splitext(file_name) |
|
|
1362 | 1353 | last_set = int(basename[-3:]) |
|
|
1363 | 1354 | |
|
|
1364 | 1355 | self.online = online |
|
|
1365 | 1356 | self.realtime = realtime |
|
|
1366 | 1357 | self.delay = delay |
|
|
1367 | 1358 | ext = ext.lower() |
|
|
1368 | 1359 | self.ext = ext |
|
|
1369 | 1360 | self.getByBlock = getblock |
|
|
1370 | 1361 | self.nTxs = nTxs |
|
|
1371 | 1362 | self.startTime = startTime |
|
|
1372 | 1363 | self.endTime = endTime |
|
|
1373 | 1364 | self.endDate = endDate |
|
|
1374 | 1365 | self.startDate = startDate |
|
|
1375 | 1366 | # Added----------------- |
|
|
1376 | 1367 | self.selBlocksize = blocksize |
|
|
1377 | 1368 | self.selBlocktime = blocktime |
|
|
1378 | 1369 | |
|
|
1379 | 1370 | # Verbose----------- |
|
|
1380 | 1371 | self.verbose = verbose |
|
|
1381 | 1372 | self.warnings = warnings |
|
|
1382 | 1373 | |
|
|
1383 | 1374 | if not(self.setNextFile()): |
|
|
1384 | 1375 | if (startDate != None) and (endDate != None): |
|
|
1385 | 1376 | print "[Reading] No files in range: %s - %s" % (datetime.datetime.combine(startDate, startTime).ctime(), datetime.datetime.combine(endDate, endTime).ctime()) |
|
|
1386 | 1377 | elif startDate != None: |
|
|
1387 | 1378 | print "[Reading] No files in range: %s" % (datetime.datetime.combine(startDate, startTime).ctime()) |
|
|
1388 | 1379 | else: |
|
|
1389 | 1380 | print "[Reading] No files" |
|
|
1390 | 1381 | |
|
|
1391 | 1382 | self.fileIndex = -1 |
|
|
1392 | 1383 | self.pathList = [] |
|
|
1393 | 1384 | self.filenameList = [] |
|
|
1394 | 1385 | return |
|
|
1395 | 1386 | |
|
|
1396 | 1387 | # self.getBasicHeader() |
|
|
1397 | 1388 | |
|
|
1398 | 1389 | if last_set != None: |
|
|
1399 | 1390 | self.dataOut.last_block = last_set * \ |
|
|
1400 | 1391 | self.processingHeaderObj.dataBlocksPerFile + self.basicHeaderObj.dataBlock |
|
|
1401 | 1392 | return |
|
|
1402 | 1393 | |
|
|
1403 | 1394 | def getBasicHeader(self): |
|
|
1404 | 1395 | |
|
|
1405 | 1396 | self.dataOut.utctime = self.basicHeaderObj.utc + self.basicHeaderObj.miliSecond / \ |
|
|
1406 | 1397 | 1000. + self.profileIndex * self.radarControllerHeaderObj.ippSeconds |
|
|
1407 | 1398 | |
|
|
1408 | 1399 | self.dataOut.flagDiscontinuousBlock = self.flagDiscontinuousBlock |
|
|
1409 | 1400 | |
|
|
1410 | 1401 | self.dataOut.timeZone = self.basicHeaderObj.timeZone |
|
|
1411 | 1402 | |
|
|
1412 | 1403 | self.dataOut.dstFlag = self.basicHeaderObj.dstFlag |
|
|
1413 | 1404 | |
|
|
1414 | 1405 | self.dataOut.errorCount = self.basicHeaderObj.errorCount |
|
|
1415 | 1406 | |
|
|
1416 | 1407 | self.dataOut.useLocalTime = self.basicHeaderObj.useLocalTime |
|
|
1417 | 1408 | |
|
|
1418 | 1409 | self.dataOut.ippSeconds = self.radarControllerHeaderObj.ippSeconds / self.nTxs |
|
|
1419 | 1410 | |
|
|
1420 | 1411 | # self.dataOut.nProfiles = self.processingHeaderObj.profilesPerBlock*self.nTxs |
|
|
1421 | 1412 | |
|
|
1422 | 1413 | def getFirstHeader(self): |
|
|
1423 | 1414 | |
|
|
1424 | 1415 | raise NotImplementedError |
|
|
1425 | 1416 | |
|
|
1426 | 1417 | def getData(self): |
|
|
1427 | 1418 | |
|
|
1428 | 1419 | raise NotImplementedError |
|
|
1429 | 1420 | |
|
|
1430 | 1421 | def hasNotDataInBuffer(self): |
|
|
1431 | 1422 | |
|
|
1432 | 1423 | raise NotImplementedError |
|
|
1433 | 1424 | |
|
|
1434 | 1425 | def readBlock(self): |
|
|
1435 | 1426 | |
|
|
1436 | 1427 | raise NotImplementedError |
|
|
1437 | 1428 | |
|
|
1438 | 1429 | def isEndProcess(self): |
|
|
1439 | 1430 | |
|
|
1440 | 1431 | return self.flagNoMoreFiles |
|
|
1441 | 1432 | |
|
|
1442 | 1433 | def printReadBlocks(self): |
|
|
1443 | 1434 | |
|
|
1444 | 1435 | print "[Reading] Number of read blocks per file %04d" % self.nReadBlocks |
|
|
1445 | 1436 | |
|
|
1446 | 1437 | def printTotalBlocks(self): |
|
|
1447 | 1438 | |
|
|
1448 | 1439 | print "[Reading] Number of read blocks %04d" % self.nTotalBlocks |
|
|
1449 | 1440 | |
|
|
1450 | 1441 | def printNumberOfBlock(self): |
|
|
1451 | 1442 | 'SPAM!' |
|
|
1452 | 1443 | |
|
|
1453 | 1444 | # if self.flagIsNewBlock: |
|
|
1454 | 1445 | # print "[Reading] Block No. %d/%d -> %s" %(self.nReadBlocks, |
|
|
1455 | 1446 | # self.processingHeaderObj.dataBlocksPerFile, |
|
|
1456 | 1447 | # self.dataOut.datatime.ctime()) |
|
|
1457 | 1448 | |
|
|
1458 | 1449 | def printInfo(self): |
|
|
1459 | 1450 | |
|
|
1460 | 1451 | if self.__printInfo == False: |
|
|
1461 | 1452 | return |
|
|
1462 | 1453 | |
|
|
1463 | 1454 | self.basicHeaderObj.printInfo() |
|
|
1464 | 1455 | self.systemHeaderObj.printInfo() |
|
|
1465 | 1456 | self.radarControllerHeaderObj.printInfo() |
|
|
1466 | 1457 | self.processingHeaderObj.printInfo() |
|
|
1467 | 1458 | |
|
|
1468 | 1459 | self.__printInfo = False |
|
|
1469 | 1460 | |
|
|
1470 | 1461 | def run(self, |
|
|
1471 | 1462 | path=None, |
|
|
1472 | 1463 | startDate=None, |
|
|
1473 | 1464 | endDate=None, |
|
|
1474 | 1465 | startTime=datetime.time(0, 0, 0), |
|
|
1475 | 1466 | endTime=datetime.time(23, 59, 59), |
|
|
1476 | 1467 | set=None, |
|
|
1477 | 1468 | expLabel="", |
|
|
1478 | 1469 | ext=None, |
|
|
1479 | 1470 | online=False, |
|
|
1480 | 1471 | delay=60, |
|
|
1481 | 1472 | walk=True, |
|
|
1482 | 1473 | getblock=False, |
|
|
1483 | 1474 | nTxs=1, |
|
|
1484 | 1475 | realtime=False, |
|
|
1485 | 1476 | blocksize=None, |
|
|
1486 | 1477 | blocktime=None, |
|
|
1487 | 1478 | skip=None, |
|
|
1488 | 1479 | cursor=None, |
|
|
1489 | 1480 | warnings=True, |
|
|
1490 | 1481 | server=None, |
|
|
1491 | 1482 | verbose=True, |
|
|
1492 | 1483 | format=None, |
|
|
1493 | 1484 | oneDDict=None, |
|
|
1494 | 1485 | twoDDict=None, |
|
|
1495 | 1486 | ind2DList=None, **kwargs): |
|
|
1496 | 1487 | |
|
|
1497 | 1488 | if not(self.isConfig): |
|
|
1498 | 1489 | self.setup(path=path, |
|
|
1499 | 1490 | startDate=startDate, |
|
|
1500 | 1491 | endDate=endDate, |
|
|
1501 | 1492 | startTime=startTime, |
|
|
1502 | 1493 | endTime=endTime, |
|
|
1503 | 1494 | set=set, |
|
|
1504 | 1495 | expLabel=expLabel, |
|
|
1505 | 1496 | ext=ext, |
|
|
1506 | 1497 | online=online, |
|
|
1507 | 1498 | delay=delay, |
|
|
1508 | 1499 | walk=walk, |
|
|
1509 | 1500 | getblock=getblock, |
|
|
1510 | 1501 | nTxs=nTxs, |
|
|
1511 | 1502 | realtime=realtime, |
|
|
1512 | 1503 | blocksize=blocksize, |
|
|
1513 | 1504 | blocktime=blocktime, |
|
|
1514 | 1505 | skip=skip, |
|
|
1515 | 1506 | cursor=cursor, |
|
|
1516 | 1507 | warnings=warnings, |
|
|
1517 | 1508 | server=server, |
|
|
1518 | 1509 | verbose=verbose, |
|
|
1519 | 1510 | format=format, |
|
|
1520 | 1511 | oneDDict=oneDDict, |
|
|
1521 | 1512 | twoDDict=twoDDict, |
|
|
1522 | 1513 | ind2DList=ind2DList) |
|
|
1523 | 1514 | self.isConfig = True |
|
|
1524 | 1515 | if server is None: |
|
|
1525 | 1516 | self.getData() |
|
|
1526 | 1517 | else: |
|
|
1527 | 1518 | self.getFromServer() |
|
|
1528 | 1519 | |
|
|
1529 | 1520 | |
|
|
1530 | 1521 | class JRODataWriter(JRODataIO): |
|
|
1531 | 1522 | |
|
|
1532 | 1523 | """ |
|
|
1533 | 1524 | Esta clase permite escribir datos a archivos procesados (.r o ,pdata). La escritura |
|
|
1534 | 1525 | de los datos siempre se realiza por bloques. |
|
|
1535 | 1526 | """ |
|
|
1536 | 1527 | |
|
|
1537 | 1528 | blockIndex = 0 |
|
|
1538 | 1529 | |
|
|
1539 | 1530 | path = None |
|
|
1540 | 1531 | |
|
|
1541 | 1532 | setFile = None |
|
|
1542 | 1533 | |
|
|
1543 | 1534 | profilesPerBlock = None |
|
|
1544 | 1535 | |
|
|
1545 | 1536 | blocksPerFile = None |
|
|
1546 | 1537 | |
|
|
1547 | 1538 | nWriteBlocks = 0 |
|
|
1548 | 1539 | |
|
|
1549 | 1540 | fileDate = None |
|
|
1550 | 1541 | |
|
|
1551 | 1542 | def __init__(self, dataOut=None): |
|
|
1552 | 1543 | raise NotImplementedError |
|
|
1553 | 1544 | |
|
|
1554 | 1545 | def hasAllDataInBuffer(self): |
|
|
1555 | 1546 | raise NotImplementedError |
|
|
1556 | 1547 | |
|
|
1557 | 1548 | def setBlockDimension(self): |
|
|
1558 | 1549 | raise NotImplementedError |
|
|
1559 | 1550 | |
|
|
1560 | 1551 | def writeBlock(self): |
|
|
1561 | 1552 | raise NotImplementedError |
|
|
1562 | 1553 | |
|
|
1563 | 1554 | def putData(self): |
|
|
1564 | 1555 | raise NotImplementedError |
|
|
1565 | 1556 | |
|
|
1566 | 1557 | def getProcessFlags(self): |
|
|
1567 | 1558 | |
|
|
1568 | 1559 | processFlags = 0 |
|
|
1569 | 1560 | |
|
|
1570 | 1561 | dtype_index = get_dtype_index(self.dtype) |
|
|
1571 | 1562 | procflag_dtype = get_procflag_dtype(dtype_index) |
|
|
1572 | 1563 | |
|
|
1573 | 1564 | processFlags += procflag_dtype |
|
|
1574 | 1565 | |
|
|
1575 | 1566 | if self.dataOut.flagDecodeData: |
|
|
1576 | 1567 | processFlags += PROCFLAG.DECODE_DATA |
|
|
1577 | 1568 | |
|
|
1578 | 1569 | if self.dataOut.flagDeflipData: |
|
|
1579 | 1570 | processFlags += PROCFLAG.DEFLIP_DATA |
|
|
1580 | 1571 | |
|
|
1581 | 1572 | if self.dataOut.code is not None: |
|
|
1582 | 1573 | processFlags += PROCFLAG.DEFINE_PROCESS_CODE |
|
|
1583 | 1574 | |
|
|
1584 | 1575 | if self.dataOut.nCohInt > 1: |
|
|
1585 | 1576 | processFlags += PROCFLAG.COHERENT_INTEGRATION |
|
|
1586 | 1577 | |
|
|
1587 | 1578 | if self.dataOut.type == "Spectra": |
|
|
1588 | 1579 | if self.dataOut.nIncohInt > 1: |
|
|
1589 | 1580 | processFlags += PROCFLAG.INCOHERENT_INTEGRATION |
|
|
1590 | 1581 | |
|
|
1591 | 1582 | if self.dataOut.data_dc is not None: |
|
|
1592 | 1583 | processFlags += PROCFLAG.SAVE_CHANNELS_DC |
|
|
1593 | 1584 | |
|
|
1594 | 1585 | if self.dataOut.flagShiftFFT: |
|
|
1595 | 1586 | processFlags += PROCFLAG.SHIFT_FFT_DATA |
|
|
1596 | 1587 | |
|
|
1597 | 1588 | return processFlags |
|
|
1598 | 1589 | |
|
|
1599 | 1590 | def setBasicHeader(self): |
|
|
1600 | 1591 | |
|
|
1601 | 1592 | self.basicHeaderObj.size = self.basicHeaderSize # bytes |
|
|
1602 | 1593 | self.basicHeaderObj.version = self.versionFile |
|
|
1603 | 1594 | self.basicHeaderObj.dataBlock = self.nTotalBlocks |
|
|
1604 | 1595 | |
|
|
1605 | 1596 | utc = numpy.floor(self.dataOut.utctime) |
|
|
1606 | 1597 | milisecond = (self.dataOut.utctime - utc) * 1000.0 |
|
|
1607 | 1598 | |
|
|
1608 | 1599 | self.basicHeaderObj.utc = utc |
|
|
1609 | 1600 | self.basicHeaderObj.miliSecond = milisecond |
|
|
1610 | 1601 | self.basicHeaderObj.timeZone = self.dataOut.timeZone |
|
|
1611 | 1602 | self.basicHeaderObj.dstFlag = self.dataOut.dstFlag |
|
|
1612 | 1603 | self.basicHeaderObj.errorCount = self.dataOut.errorCount |
|
|
1613 | 1604 | |
|
|
1614 | 1605 | def setFirstHeader(self): |
|
|
1615 | 1606 | """ |
|
|
1616 | 1607 | Obtiene una copia del First Header |
|
|
1617 | 1608 | |
|
|
1618 | 1609 | Affected: |
|
|
1619 | 1610 | |
|
|
1620 | 1611 | self.basicHeaderObj |
|
|
1621 | 1612 | self.systemHeaderObj |
|
|
1622 | 1613 | self.radarControllerHeaderObj |
|
|
1623 | 1614 | self.processingHeaderObj self. |
|
|
1624 | 1615 | |
|
|
1625 | 1616 | Return: |
|
|
1626 | 1617 | None |
|
|
1627 | 1618 | """ |
|
|
1628 | 1619 | |
|
|
1629 | 1620 | raise NotImplementedError |
|
|
1630 | 1621 | |
|
|
1631 | 1622 | def __writeFirstHeader(self): |
|
|
1632 | 1623 | """ |
|
|
1633 | 1624 | Escribe el primer header del file es decir el Basic header y el Long header (SystemHeader, RadarControllerHeader, ProcessingHeader) |
|
|
1634 | 1625 | |
|
|
1635 | 1626 | Affected: |
|
|
1636 | 1627 | __dataType |
|
|
1637 | 1628 | |
|
|
1638 | 1629 | Return: |
|
|
1639 | 1630 | None |
|
|
1640 | 1631 | """ |
|
|
1641 | 1632 | |
|
|
1642 | 1633 | # CALCULAR PARAMETROS |
|
|
1643 | 1634 | |
|
|
1644 | 1635 | sizeLongHeader = self.systemHeaderObj.size + \ |
|
|
1645 | 1636 | self.radarControllerHeaderObj.size + self.processingHeaderObj.size |
|
|
1646 | 1637 | self.basicHeaderObj.size = self.basicHeaderSize + sizeLongHeader |
|
|
1647 | 1638 | |
|
|
1648 | 1639 | self.basicHeaderObj.write(self.fp) |
|
|
1649 | 1640 | self.systemHeaderObj.write(self.fp) |
|
|
1650 | 1641 | self.radarControllerHeaderObj.write(self.fp) |
|
|
1651 | 1642 | self.processingHeaderObj.write(self.fp) |
|
|
1652 | 1643 | |
|
|
1653 | 1644 | def __setNewBlock(self): |
|
|
1654 | 1645 | """ |
|
|
1655 | 1646 | Si es un nuevo file escribe el First Header caso contrario escribe solo el Basic Header |
|
|
1656 | 1647 | |
|
|
1657 | 1648 | Return: |
|
|
1658 | 1649 | 0 : si no pudo escribir nada |
|
|
1659 | 1650 | 1 : Si escribio el Basic el First Header |
|
|
1660 | 1651 | """ |
|
|
1661 | 1652 | if self.fp == None: |
|
|
1662 | 1653 | self.setNextFile() |
|
|
1663 | 1654 | |
|
|
1664 | 1655 | if self.flagIsNewFile: |
|
|
1665 | 1656 | return 1 |
|
|
1666 | 1657 | |
|
|
1667 | 1658 | if self.blockIndex < self.processingHeaderObj.dataBlocksPerFile: |
|
|
1668 | 1659 | self.basicHeaderObj.write(self.fp) |
|
|
1669 | 1660 | return 1 |
|
|
1670 | 1661 | |
|
|
1671 | 1662 | if not(self.setNextFile()): |
|
|
1672 | 1663 | return 0 |
|
|
1673 | 1664 | |
|
|
1674 | 1665 | return 1 |
|
|
1675 | 1666 | |
|
|
1676 | 1667 | def writeNextBlock(self): |
|
|
1677 | 1668 | """ |
|
|
1678 | 1669 | Selecciona el bloque siguiente de datos y los escribe en un file |
|
|
1679 | 1670 | |
|
|
1680 | 1671 | Return: |
|
|
1681 | 1672 | 0 : Si no hizo pudo escribir el bloque de datos |
|
|
1682 | 1673 | 1 : Si no pudo escribir el bloque de datos |
|
|
1683 | 1674 | """ |
|
|
1684 | 1675 | if not(self.__setNewBlock()): |
|
|
1685 | 1676 | return 0 |
|
|
1686 | 1677 | |
|
|
1687 | 1678 | self.writeBlock() |
|
|
1688 | 1679 | |
|
|
1689 | 1680 | print "[Writing] Block No. %d/%d" % (self.blockIndex, |
|
|
1690 | 1681 | self.processingHeaderObj.dataBlocksPerFile) |
|
|
1691 | 1682 | |
|
|
1692 | 1683 | return 1 |
|
|
1693 | 1684 | |
|
|
1694 | 1685 | def setNextFile(self): |
|
|
1695 | 1686 | """ |
|
|
1696 | 1687 | Determina el siguiente file que sera escrito |
|
|
1697 | 1688 | |
|
|
1698 | 1689 | Affected: |
|
|
1699 | 1690 | self.filename |
|
|
1700 | 1691 | self.subfolder |
|
|
1701 | 1692 | self.fp |
|
|
1702 | 1693 | self.setFile |
|
|
1703 | 1694 | self.flagIsNewFile |
|
|
1704 | 1695 | |
|
|
1705 | 1696 | Return: |
|
|
1706 | 1697 | 0 : Si el archivo no puede ser escrito |
|
|
1707 | 1698 | 1 : Si el archivo esta listo para ser escrito |
|
|
1708 | 1699 | """ |
|
|
1709 | 1700 | ext = self.ext |
|
|
1710 | 1701 | path = self.path |
|
|
1711 | 1702 | |
|
|
1712 | 1703 | if self.fp != None: |
|
|
1713 | 1704 | self.fp.close() |
|
|
1714 | 1705 | |
|
|
1715 | 1706 | timeTuple = time.localtime(self.dataOut.utctime) |
|
|
1716 | 1707 | subfolder = 'd%4.4d%3.3d' % (timeTuple.tm_year, timeTuple.tm_yday) |
|
|
1717 | 1708 | |
|
|
1718 | 1709 | fullpath = os.path.join(path, subfolder) |
|
|
1719 | 1710 | setFile = self.setFile |
|
|
1720 | 1711 | |
|
|
1721 | 1712 | if not(os.path.exists(fullpath)): |
|
|
1722 | 1713 | os.mkdir(fullpath) |
|
|
1723 | 1714 | setFile = -1 # inicializo mi contador de seteo |
|
|
1724 | 1715 | else: |
|
|
1725 | 1716 | filesList = os.listdir(fullpath) |
|
|
1726 | 1717 | if len(filesList) > 0: |
|
|
1727 | 1718 | filesList = sorted(filesList, key=str.lower) |
|
|
1728 | 1719 | filen = filesList[-1] |
|
|
1729 | 1720 | # el filename debera tener el siguiente formato |
|
|
1730 | 1721 | # 0 1234 567 89A BCDE (hex) |
|
|
1731 | 1722 | # x YYYY DDD SSS .ext |
|
|
1732 | 1723 | if isNumber(filen[8:11]): |
|
|
1733 | 1724 | # inicializo mi contador de seteo al seteo del ultimo file |
|
|
1734 | 1725 | setFile = int(filen[8:11]) |
|
|
1735 | 1726 | else: |
|
|
1736 | 1727 | setFile = -1 |
|
|
1737 | 1728 | else: |
|
|
1738 | 1729 | setFile = -1 # inicializo mi contador de seteo |
|
|
1739 | 1730 | |
|
|
1740 | 1731 | setFile += 1 |
|
|
1741 | 1732 | |
|
|
1742 | 1733 | # If this is a new day it resets some values |
|
|
1743 | 1734 | if self.dataOut.datatime.date() > self.fileDate: |
|
|
1744 | 1735 | setFile = 0 |
|
|
1745 | 1736 | self.nTotalBlocks = 0 |
|
|
1746 | 1737 | |
|
|
1747 | filen = '%s%4.4d%3.3d%3.3d%s' % ( | |
|
|
1738 | filen = '{}{:04d}{:03d}{:03d}{}'.format( | |
|
|
1748 | 1739 | self.optchar, timeTuple.tm_year, timeTuple.tm_yday, setFile, ext) |
|
|
1749 | 1740 | |
|
|
1750 | 1741 | filename = os.path.join(path, subfolder, filen) |
|
|
1751 | 1742 | |
|
|
1752 | 1743 | fp = open(filename, 'wb') |
|
|
1753 | 1744 | |
|
|
1754 | 1745 | self.blockIndex = 0 |
|
|
1755 | 1746 | |
|
|
1756 | 1747 | # guardando atributos |
|
|
1757 | 1748 | self.filename = filename |
|
|
1758 | 1749 | self.subfolder = subfolder |
|
|
1759 | 1750 | self.fp = fp |
|
|
1760 | 1751 | self.setFile = setFile |
|
|
1761 | 1752 | self.flagIsNewFile = 1 |
|
|
1762 | 1753 | self.fileDate = self.dataOut.datatime.date() |
|
|
1763 | 1754 | |
|
|
1764 | 1755 | self.setFirstHeader() |
|
|
1765 | 1756 | |
|
|
1766 | 1757 | print '[Writing] Opening file: %s' % self.filename |
|
|
1767 | 1758 | |
|
|
1768 | 1759 | self.__writeFirstHeader() |
|
|
1769 | 1760 | |
|
|
1770 | 1761 | return 1 |
|
|
1771 | 1762 | |
|
|
1772 | 1763 | def setup(self, dataOut, path, blocksPerFile, profilesPerBlock=64, set=None, ext=None, datatype=4): |
|
|
1773 | 1764 | """ |
|
|
1774 | 1765 | Setea el tipo de formato en la cual sera guardada la data y escribe el First Header |
|
|
1775 | 1766 | |
|
|
1776 | 1767 | Inputs: |
|
|
1777 | 1768 | path : directory where data will be saved |
|
|
1778 | 1769 | profilesPerBlock : number of profiles per block |
|
|
1779 | 1770 | set : initial file set |
|
|
1780 | 1771 | datatype : An integer number that defines data type: |
|
|
1781 | 1772 | 0 : int8 (1 byte) |
|
|
1782 | 1773 | 1 : int16 (2 bytes) |
|
|
1783 | 1774 | 2 : int32 (4 bytes) |
|
|
1784 | 1775 | 3 : int64 (8 bytes) |
|
|
1785 | 1776 | 4 : float32 (4 bytes) |
|
|
1786 | 1777 | 5 : double64 (8 bytes) |
|
|
1787 | 1778 | |
|
|
1788 | 1779 | Return: |
|
|
1789 | 1780 | 0 : Si no realizo un buen seteo |
|
|
1790 | 1781 | 1 : Si realizo un buen seteo |
|
|
1791 | 1782 | """ |
|
|
1792 | 1783 | |
|
|
1793 | 1784 | if ext == None: |
|
|
1794 | 1785 | ext = self.ext |
|
|
1795 | 1786 | |
|
|
1796 | 1787 | self.ext = ext.lower() |
|
|
1797 | 1788 | |
|
|
1798 | 1789 | self.path = path |
|
|
1799 | 1790 | |
|
|
1800 | 1791 | if set is None: |
|
|
1801 | 1792 | self.setFile = -1 |
|
|
1802 | 1793 | else: |
|
|
1803 | 1794 | self.setFile = set - 1 |
|
|
1804 | 1795 | |
|
|
1805 | 1796 | self.blocksPerFile = blocksPerFile |
|
|
1806 | 1797 | |
|
|
1807 | 1798 | self.profilesPerBlock = profilesPerBlock |
|
|
1808 | 1799 | |
|
|
1809 | 1800 | self.dataOut = dataOut |
|
|
1810 | 1801 | self.fileDate = self.dataOut.datatime.date() |
|
|
1811 | 1802 | # By default |
|
|
1812 | 1803 | self.dtype = self.dataOut.dtype |
|
|
1813 | 1804 | |
|
|
1814 | 1805 | if datatype is not None: |
|
|
1815 | 1806 | self.dtype = get_numpy_dtype(datatype) |
|
|
1816 | 1807 | |
|
|
1817 | 1808 | if not(self.setNextFile()): |
|
|
1818 | 1809 | print "[Writing] There isn't a next file" |
|
|
1819 | 1810 | return 0 |
|
|
1820 | 1811 | |
|
|
1821 | 1812 | self.setBlockDimension() |
|
|
1822 | 1813 | |
|
|
1823 | 1814 | return 1 |
|
|
1824 | 1815 | |
|
|
1825 | 1816 | def run(self, dataOut, path, blocksPerFile, profilesPerBlock=64, set=None, ext=None, datatype=4, **kwargs): |
|
|
1826 | 1817 | |
|
|
1827 | 1818 | if not(self.isConfig): |
|
|
1828 | 1819 | |
|
|
1829 | 1820 | self.setup(dataOut, path, blocksPerFile, profilesPerBlock=profilesPerBlock, |
|
|
1830 | 1821 | set=set, ext=ext, datatype=datatype, **kwargs) |
|
|
1831 | 1822 | self.isConfig = True |
|
|
1832 | 1823 | |
|
|
1833 | 1824 | self.putData() |
| @@ -1,69 +1,69 | |||
|
|
1 | 1 | ''' |
|
|
2 | 2 | Created on Jul 16, 2014 |
|
|
3 | 3 | |
|
|
4 | 4 | @author: Miguel Urco |
|
|
5 | 5 | ''' |
|
|
6 | 6 | |
|
|
7 | 7 | import os |
|
|
8 | 8 | from setuptools import setup, Extension |
|
|
9 | 9 | from setuptools.command.build_ext import build_ext as _build_ext |
|
|
10 | 10 | from schainpy import __version__ |
|
|
11 | 11 | |
|
|
12 | 12 | class build_ext(_build_ext): |
|
|
13 | 13 | def finalize_options(self): |
|
|
14 | 14 | _build_ext.finalize_options(self) |
|
|
15 | 15 | # Prevent numpy from thinking it is still in its setup process: |
|
|
16 | 16 | __builtins__.__NUMPY_SETUP__ = False |
|
|
17 | 17 | import numpy |
|
|
18 | 18 | self.include_dirs.append(numpy.get_include()) |
|
|
19 | 19 | |
|
|
20 | 20 | setup(name="schainpy", |
|
|
21 | 21 | version=__version__, |
|
|
22 | 22 | description="Python tools to read, write and process Jicamarca data", |
|
|
23 | 23 | author="Miguel Urco", |
|
|
24 | 24 | author_email="miguel.urco@jro.igp.gob.pe", |
|
|
25 | 25 | url="http://jro.igp.gob.pe", |
|
|
26 | 26 | packages={'schainpy', |
|
|
27 | 27 | 'schainpy.model', |
|
|
28 | 28 | 'schainpy.model.data', |
|
|
29 | 29 | 'schainpy.model.graphics', |
|
|
30 | 30 | 'schainpy.model.io', |
|
|
31 | 31 | 'schainpy.model.proc', |
|
|
32 | 32 | 'schainpy.model.serializer', |
|
|
33 | 33 | 'schainpy.model.utils', |
|
|
34 | 34 | 'schainpy.utils', |
|
|
35 | 35 | 'schainpy.gui', |
|
|
36 | 36 | 'schainpy.gui.figures', |
|
|
37 | 37 | 'schainpy.gui.viewcontroller', |
|
|
38 | 38 | 'schainpy.gui.viewer', |
|
|
39 | 39 | 'schainpy.gui.viewer.windows'}, |
|
|
40 | 40 | ext_package='schainpy', |
|
|
41 | 41 | py_modules=[''], |
|
|
42 | 42 | package_data={'': ['schain.conf.template'], |
|
|
43 | 43 | 'schainpy.gui.figures': ['*.png', '*.jpg'], |
|
|
44 | 44 | }, |
|
|
45 | 45 | include_package_data=False, |
|
|
46 | 46 | scripts=['schainpy/gui/schainGUI'], |
|
|
47 | 47 | ext_modules=[ |
|
|
48 | 48 | Extension("cSchain", ["schainpy/model/proc/extensions.c"] |
|
|
49 | 49 | )], |
|
|
50 | 50 | entry_points={ |
|
|
51 | 51 | 'console_scripts': [ |
|
|
52 | 52 | 'schain = schaincli.cli:main', |
|
|
53 | 53 | ], |
|
|
54 | 54 | }, |
|
|
55 | 55 | cmdclass={'build_ext': build_ext}, |
|
|
56 | 56 | setup_requires=["numpy >= 1.11.2"], |
|
|
57 | 57 | install_requires=[ |
|
|
58 | 58 | "scipy >= 0.14.0", |
|
|
59 | 59 | "h5py >= 2.2.1", |
|
|
60 |
"matplotlib >= |
|
|
|
60 | "matplotlib >= 2.0.0", | |
|
|
61 | 61 | "pyfits >= 3.4", |
|
|
62 | 62 | "paramiko >= 2.1.2", |
|
|
63 | 63 | "paho-mqtt >= 1.2", |
|
|
64 | 64 | "zmq", |
|
|
65 | 65 | "fuzzywuzzy", |
|
|
66 | 66 | "click", |
|
|
67 | 67 | "python-Levenshtein" |
|
|
68 | 68 | ], |
|
|
69 | 69 | ) |
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